Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATTGATTGTGTTGGTTTCAATTTGTTCTTATGCAAATTTCAAAATGCTCAAGTTAAAAGTAAAATCATTGAGAATGGACCATGGTTTTTCGATAAAGCAATGCTCTTAATGGAGGAACCAAAAGCAGATAGCTGTGGCGAGGAAACGGATTTCAGGTATGTTTCCTTCTGGATTCATTTTCATAAACTCCATTTGCTTGTTTTTCTAGGAACACAACAAAGGAAATTGGCAGCTTATTAGGAAAAGTGGAACAAATTGACTTAGAGGATGAAAAAGAGCAACACTGGAGTCGATCGTTAATAATGAAGATACAAGTTGAAGTTTATTCGCCGTTAAAGCGAGGTATTTTCCTGAAATCAGAGAAAAGGGGGGTTGATAAATGGATCAAACTTACTTATGAAAAACTATCGGATTTCAGTTATGGATGTGGCTTGTTGGGGCATACGATTAAAGAATGTGAAGATGAATGTGGAACCAAAGAAGAATACCTTCCATATGGCCCCTGGCTTAGGGAACCAACGAAATTGGTGAATTATAATTATGTTCCACCAGATAGAGCTGATTTCTTTGGGAGGGGAAGAGGACGAGGAAGAGATGGTGGTCGAGGGAGCTGGAGGCAGGCTAGTTTTGAGGAAGGAGTTGCTGCTACACCGGGATTTTTATCAGACCCAGTAGGATACTACTGCCAGTTCTCAGCTGGAATCTAG
mRNA sequence
ATGTTGATTGATTGTGTTGGTTTCAATTTGTTCTTATGCAAATTTCAAAATGCTCAAGTTAAAAGTAAAATCATTGAGAATGGACCATGGTTTTTCGATAAAGCAATGCTCTTAATGGAGGAACCAAAAGCAGATAGCTGTGGCGAGGAAACGGATTTCAGGAACACAACAAAGGAAATTGGCAGCTTATTAGGAAAAGTGGAACAAATTGACTTAGAGGATGAAAAAGAGCAACACTGGAGTCGATCGTTAATAATGAAGATACAAGTTGAAGTTTATTCGCCGTTAAAGCGAGGTATTTTCCTGAAATCAGAGAAAAGGGGGGTTGATAAATGGATCAAACTTACTTATGAAAAACTATCGGATTTCAGTTATGGATGTGGCTTGTTGGGGCATACGATTAAAGAATGTGAAGATGAATGTGGAACCAAAGAAGAATACCTTCCATATGGCCCCTGGCTTAGGGAACCAACGAAATTGGTGAATTATAATTATGTTCCACCAGATAGAGCTGATTTCTTTGGGAGGGGAAGAGGACGAGGAAGAGATGGTGGTCGAGGGAGCTGGAGGCAGGCTAGTTTTGAGGAAGGAGTTGCTGCTACACCGGGATTTTTATCAGACCCAGTAGGATACTACTGCCAGTTCTCAGCTGGAATCTAG
Coding sequence (CDS)
ATGTTGATTGATTGTGTTGGTTTCAATTTGTTCTTATGCAAATTTCAAAATGCTCAAGTTAAAAGTAAAATCATTGAGAATGGACCATGGTTTTTCGATAAAGCAATGCTCTTAATGGAGGAACCAAAAGCAGATAGCTGTGGCGAGGAAACGGATTTCAGGAACACAACAAAGGAAATTGGCAGCTTATTAGGAAAAGTGGAACAAATTGACTTAGAGGATGAAAAAGAGCAACACTGGAGTCGATCGTTAATAATGAAGATACAAGTTGAAGTTTATTCGCCGTTAAAGCGAGGTATTTTCCTGAAATCAGAGAAAAGGGGGGTTGATAAATGGATCAAACTTACTTATGAAAAACTATCGGATTTCAGTTATGGATGTGGCTTGTTGGGGCATACGATTAAAGAATGTGAAGATGAATGTGGAACCAAAGAAGAATACCTTCCATATGGCCCCTGGCTTAGGGAACCAACGAAATTGGTGAATTATAATTATGTTCCACCAGATAGAGCTGATTTCTTTGGGAGGGGAAGAGGACGAGGAAGAGATGGTGGTCGAGGGAGCTGGAGGCAGGCTAGTTTTGAGGAAGGAGTTGCTGCTACACCGGGATTTTTATCAGACCCAGTAGGATACTACTGCCAGTTCTCAGCTGGAATCTAG
Protein sequence
MLIDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTTKEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLREPTKLVNYNYVPPDRADFFGRGRGRGRDGGRGSWRQASFEEGVAATPGFLSDPVGYYCQFSAGI
Homology
BLAST of Lag0015576 vs. NCBI nr
Match:
XP_021749920.1 (uncharacterized protein LOC110715641 [Chenopodium quinoa])
HSP 1 Score: 108.2 bits (269), Expect = 9.0e-20
Identity = 78/235 (33.19%), Postives = 113/235 (48.09%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDF--------- 62
I + NLF+ +F N + K++I+ PWFFD +LL++E D E F
Sbjct: 73 IKMIETNLFVFQFVNEEDKNRILGGMPWFFDGKLLLLKEIIGDEQPSEIVFDRAPMWVRI 132
Query: 63 -------RNTT--KEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
RN + +E+G LG +ID D W + +K+ VEV+ PL+RG+FL +
Sbjct: 133 MDVPFNKRNLSVMREVGDSLGGFVKID--DADPLGWGEFIRIKVLVEVHKPLRRGVFL-A 192
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKEC-----EDECGTKEEYLPYGPWLR-EPT 182
G KW+ + YE+LSDF + CG+L HT KEC ED+ T+ Y YGPWLR P
Sbjct: 193 GGNGKAKWVDIKYERLSDFCFYCGILDHTDKECTKKEEEDDSSTEVVY-QYGPWLRASPL 252
Query: 183 KLVNYNYVPPDRADFFGRGRGRGRDGGRGSWRQASFEE----GVAATPGFLSDPV 210
K+ ++ G + GG S+ S + A FLS P+
Sbjct: 253 KISRSMQSDREKERRLVEKLGSKKGGGSISYNNPSTIKLGPVSAARKLNFLSSPL 303
BLAST of Lag0015576 vs. NCBI nr
Match:
XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])
HSP 1 Score: 108.2 bits (269), Expect = 9.0e-20
Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 0
Query: 6 VGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADS---------CGEETDFRNT 65
+G N+++ F++ KS+++ +GPW F+K++L++ P A + C N
Sbjct: 73 LGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNI 132
Query: 66 TKE---------IGSLLGKVEQIDLEDEKEQHWSRSLI-MKIQVEVYSPLKRGIFLKSEK 125
E +G+ LG VE+I E + W+ I ++++++V PL+RGI LK+
Sbjct: 133 PFECISTEMANILGAKLGDVEEI--EGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSD 192
Query: 126 RGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLP--YGPWLREPTKLVNYN 185
G D W L YEKL DF Y CG +GH+ +ECE P YG WLR L+ +
Sbjct: 193 -GKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR--ATLLKKS 252
Query: 186 YVPPDRADFFGRGR-GRGRD-----GGRGSWRQ 192
P+ F+ GR GRG GGRG WR+
Sbjct: 253 VSHPEEEVFWRGGRFGRGHQVNGGRGGRGDWRR 280
BLAST of Lag0015576 vs. NCBI nr
Match:
XP_024035600.1 (uncharacterized protein LOC112096408 [Citrus clementina])
HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19
Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDF--------- 62
++ +G N+FL KF + K +I+ GPW FD++++++ EP ++ DF
Sbjct: 88 VESLGDNIFLFKFASESEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFTHALFWVQI 147
Query: 63 ---------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
+ +EIG +GKV++++ +D E S + ++I V V PL + + LK
Sbjct: 148 HNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGS-FVRVRIMVNVTRPLPKRLLLKL 207
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLREPTK 160
E RG +++ YEKL DF + CGL+GH +EC D G ++ L YG W+R T+
Sbjct: 208 EDRGQIS-LRIAYEKLPDFCFCCGLIGHQYRECLDYKGQSKDDLTYGAWMRAQTR 260
BLAST of Lag0015576 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 107.1 bits (266), Expect = 2.0e-19
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT----- 62
+D +GFN+FL F + +++I+ GPW FD+A+++++ P + + + DFRN +
Sbjct: 74 VDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHF 133
Query: 63 -------------KEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
+G+ +G E ++ + W L ++++ +V PL RGI L
Sbjct: 134 FDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDVMKPLHRGIKLNL 193
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDEC-GTKEEYLPYGPWLR 156
+ WI + YE+L DF Y CG L H +K+C D C + + L YGPWLR
Sbjct: 194 DGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244
BLAST of Lag0015576 vs. NCBI nr
Match:
XP_024033132.1 (uncharacterized protein LOC112095437 [Citrus clementina])
HSP 1 Score: 106.3 bits (264), Expect = 3.4e-19
Identity = 53/171 (30.99%), Postives = 95/171 (55.56%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT----- 62
++ +G N+F+ KF + K ++ GPW FD+A+++++EPK ++ F + +
Sbjct: 72 VESLGSNIFVFKFLSEADKKRVFNGGPWHFDRALMVLQEPKGIGSIKKQSFSHVSFWIRI 131
Query: 63 -------------KEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
+E+GS +GKVE I + D + + + + +++ V + PLK+ I LK
Sbjct: 132 HNVPLMCMDTSIIRELGSRVGKVEDIGM-DAQGECFGEFVRIQVSVNITKPLKKLIVLKQ 191
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLR 156
E D + + YE+L DF + CG +GH +EC + G ++E LP+GPWL+
Sbjct: 192 ED-DEDIPLPVVYERLPDFCFCCGCIGHQFRECMEYKGQQKENLPFGPWLK 240
BLAST of Lag0015576 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 4.3e-20
Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 0
Query: 6 VGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADS---------CGEETDFRNT 65
+G N+++ F++ KS+++ +GPW F+K++L++ P A + C N
Sbjct: 73 LGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNI 132
Query: 66 TKE---------IGSLLGKVEQIDLEDEKEQHWSRSLI-MKIQVEVYSPLKRGIFLKSEK 125
E +G+ LG VE+I E + W+ I ++++++V PL+RGI LK+
Sbjct: 133 PFECISTEMANILGAKLGDVEEI--EGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSD 192
Query: 126 RGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLP--YGPWLREPTKLVNYN 185
G D W L YEKL DF Y CG +GH+ +ECE P YG WLR L+ +
Sbjct: 193 -GKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR--ATLLKKS 252
Query: 186 YVPPDRADFFGRGR-GRGRD-----GGRGSWRQ 192
P+ F+ GR GRG GGRG WR+
Sbjct: 253 VSHPEEEVFWRGGRFGRGHQVNGGRGGRGDWRR 280
BLAST of Lag0015576 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 9.7e-20
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT----- 62
+D +GFN+FL F + +++I+ GPW FD+A+++++ P + + + DFRN +
Sbjct: 74 VDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHF 133
Query: 63 -------------KEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
+G+ +G E ++ + W L ++++ +V PL RGI L
Sbjct: 134 FDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDVMKPLHRGIKLNL 193
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDEC-GTKEEYLPYGPWLR 156
+ WI + YE+L DF Y CG L H +K+C D C + + L YGPWLR
Sbjct: 194 DGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244
BLAST of Lag0015576 vs. ExPASy TrEMBL
Match:
A0A803MME0 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 3.7e-19
Identity = 62/183 (33.88%), Postives = 93/183 (50.82%), Query Frame = 0
Query: 1 MLIDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNT---- 60
M++ + N F+ +F N K ++++ PWFFD +LL++E + + E DF T
Sbjct: 71 MVVRMLDTNFFVFQFFNDADKKRVMDGMPWFFDGKVLLLQEIQGEVQPSEVDFECTPMWI 130
Query: 61 --------------TKEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFL 120
K IG LG I+L+D W + K+ V V PL+RG+FL
Sbjct: 131 RLFDVPFNRRNPQAIKSIGESLGGF--IELDDNGPLGWGEFVRHKVMVNVKKPLRRGMFL 190
Query: 121 KSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKEC----EDECGTKEEYLPYGPWLR-EP 161
+ + +WI + YE+L+DF + CG+L HT KEC ED+ +E YGPW+R P
Sbjct: 191 ATGE-SKPRWIDIKYERLADFCFYCGILDHTEKECSKKEEDDLEKQEMVYQYGPWMRASP 250
BLAST of Lag0015576 vs. ExPASy TrEMBL
Match:
A0A5C7H466 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023726 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 60/210 (28.57%), Postives = 102/210 (48.57%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPK-----ADSCGEETDF---- 62
I+ V N+FL KF N + +++I + GPW+FDK+++++ +P+ + C +
Sbjct: 72 IELVEVNVFLFKFNNQEERNRIWQRGPWYFDKSLIVLVKPEGMGNISQLCFNSVEMWVQI 131
Query: 63 ---------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
R K + +G+V +D+ E W + L +K+Q+++ PLKR + L+
Sbjct: 132 HDVPIICMNRRLAKWMAEQIGRV--VDIPTESRDCWGKFLKVKVQIDITKPLKRWLRLRM 191
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEY----LPYGPWLREP-TK 182
E+ + L YE+L +F Y CG +GH K+CED +E +G W+R P
Sbjct: 192 EQSPAIVMVSLKYERLPEFCYVCGRIGHASKDCEDVEAKREALERVSTKFGSWMRAPGLD 251
Query: 183 LVNYNYVPPDRAD------FFGRGRGRGRD 184
N + P F GR G+G+D
Sbjct: 252 WQKPNMMKPVEGSSQIQRRFEGRSEGKGQD 279
BLAST of Lag0015576 vs. ExPASy TrEMBL
Match:
A0A5C7HBM7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019557 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 5.3e-18
Identity = 58/177 (32.77%), Postives = 91/177 (51.41%), Query Frame = 0
Query: 3 IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEP------------KADSCGEE 62
I+ V N+FL F + ++K+ + GPW FDK +L++E+P KAD +
Sbjct: 72 IEMVSENVFLFFFNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNKADFWIQI 131
Query: 63 TDF------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKS 122
D R T K + +G+V I++ + W + L +K+++++ PLKR + L
Sbjct: 132 HDIPIMCMNRRTAKWLAEQIGEV--IEIPTDSRDCWGKFLRVKVRIDISKPLKRWLRLGL 191
Query: 123 EKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEY----LPYGPWLREP 158
++ G + L YE+L +F Y CG LGH I EC D KE L +GPW+R P
Sbjct: 192 DRSGNIVVVGLKYERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLRFGPWMRAP 246
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D765 | 4.3e-20 | 33.33 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1BSZ1 | 9.7e-20 | 31.40 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A803MME0 | 3.7e-19 | 33.88 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | [more] |
A0A5C7H466 | 1.4e-18 | 28.57 | CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02372... | [more] |
A0A5C7HBM7 | 5.3e-18 | 32.77 | CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01955... | [more] |
Match Name | E-value | Identity | Description | |