Lag0015502 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015502
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Glycine--tRNA ligase beta subunit
Location	chr12: 14497107 .. 14509800 (+)
RNA-Seq Expression	Lag0015502
Synteny	Lag0015502

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTATCATGGTTCCTTAAGACTCTTTTCCATGTTTCAGGAAAGACAGAATATCTATATGCTCGTATAATGGAGTCTTCTCGGCTTGCTTTGGAGGTTCTAATGTGCTTTTCCTCTTTCCACCCTTGCTTTTATATGTGGTATACCTATCTGCTTGATTTTCCTTTAAAAAAGAAACAAAACTTTTCATTGAAATTTGGAACGTTACAATTTGAGAAAATGTAACTGTGGACAGAAAGAAAGGAAAACCAATCCTCTTTACAGCATACTTTTGAAAAAGAGTTCTCCCATAAACAAAAATTTAGAGATTTACGAAAAGACTCACAACTATAATTGGTTATATTGGAGGAATAATCAGAAAACAATCTTTTTTGTGAACATCAAAGAGAAGCATGATTTTTTAGAATAATTCCATCTTCCAAATCAATTAGATCATCTTTCTTTGAGAATTCTTTTGTTTCTTACAAACCAAACTCTAAGAAAACTTTTTAACGGCATTAATCCATGAAAATCTTGCTTTACTTTTCAGCTCCATTCCATTTATTATGAACCGTTATCCAAAACCCATGAACACTTGAAAATGCTATATGAGCCGCAATATTATCATTTACTCTTAGATTTTCTTTAGTCCTATCACTATGCTTTTAGTAATTTATGTGAATTGTTTATCATTTAGAACTTAGGGACCCTCGAAAAAAGTGCTTTTATGGGGAGTATCAACAGATTTGTAATAAATAATTCACGTGATTCTTCTGTCTGTGAATTTAAAGAAAATGTCAAATGCATGTCCATAGTTAATGTGAGTGTATGTTAGTAAATTATAGTTTGTCATTTTAGCTCATCCAAGTTAGTTTTGTAGATAGTTTCAAAAAAAAAAAAGTTAGTTTTGTAGAATTCTCAGTATAGTTGATCTGATGGATCATTTAGTAAATGACATTGAATATGTACTTGTAAATTGTAATATATTAGAATTTAGAACTCTTGTTGTGTTTTAGCCTCGTCTAATTTTACTCTAATTTATCTTTTGTTTTGTTCCAGATTTTCTCTGAGAATTTACCTGGCATTGTAGCTAGAATATCATTCCCAAAGTCGATGAGGTGGAACTCTCAGGTATGGACACAAAGCATATTTAAGCTGATCTCATGTGGTTCTTGATTTTTAGTTCACTGTTTTTCGTTTCCCATTTGAAGTATTGAGCTGTTTTATTCCGTCTTTCTTGGTTAATAAATTATGTGAACTGTGGTCAGAAATTTATTTTGTGTTTTATCTTCACAATATCTCCATTCTTTATAACAATATGCACTTGATCACCTTAAAAGCAAAAGAGATTATGCTCGTTTATGCATCATATGGTATCCAAAATATGCTATTCATACTTAATCAGACATTATTGGATACTAGAATGTTGAAGTCGGAAAATAAGAGTATTGACTCGGACACTAAAGAGGAAGTGTATTGAATCAAGAGCAGAAAGTGTCTTTTATGAGTGAGAAATTTACTTCCCAATTCATACAAAAATCAAGAGCAGAGTGTAGAATGAGAGAATGATGTTTATTAATGAAGTTCCAGCCCTTAAATAGGCAAAGGAACTAACTAAAAGTGGTTACAAGGCACATGCTACTCACATGGCATACTAAAGAGATAACTAGCTTAATAGGCATATAATCGGCTACATCAATTTCCTCGCCCAACAAAAATAACTCGACCTCAAGTTAGGTAATAAACGGCCAAAAATTCCATTCTTGGACTGTATCCCATTCTTGGACTGTTCTTTTATAAAAAATTTGCCTTTCTTGCCTTTCTTTCTGATATTTTACCCTGTTTTCTTTCTGATATTTTGTCTTGCTGCATTCACCTTCGCGGTTTTGTTGATCTTTTCCCCAATTTGTCTGCATTGCTGGATTTGTAATCACCTGCTCGATCTTGTTGCCAATTTTTTCCAGAATCATTTGCGTTTCTAAAGGCTTCCACTTGAAGAATTCTTGCTGCCAATTATGTAATGAGTTGATGTGGAAGTCTTGATGCATTATTCGTTGTTCTTGATACTTTCTTGGAGCTAAATGTGTTTCTTGAACTATTCTTTGCTCCATTGTTTGTCTTTTTTGCCACTGTCCCATCCTTTCTTCCAATTCCCGAGATGCTTTATCTTGTTCTTGATAAGTTCTCTCCATGGTAGATTGCCCCATTAGGTTACAGCTTGGTTCCCCTTGTTTCCCATCTTTCCAAGGTCCTTGTTTCTCGAGGAGTCTGTCCCGCCTTGTTGTCTCCTATACAAGGGATTATTGTTGAATTCTTGGAGCATTGGTCGGCGTTCTTGATGGATTCTTGGAGGAAAATCTGCTTCTTGGACCATTCTTTGTTCCATTCCTAGCTTTTCTTGCATCATCGGGTTTGTTGATTGTTGATCTGGTTTAATTACCATCTCGCAGATTTTTCTTAAGGTTTTCTTGATCTCATGCATGTCGTTTTCAACTGACAGCAAGCGTGCAGGTTATTCTTGTGGTGAGAAGACGGTAGTTGACTCCGCCTCTTTTCCAACCGAAGATGAATCTCCTCCCACCTTGGTCGAGACTCTCTTGGTCGTCATAGTGGAAGCGCCCAAAAATCGTGCGCTCTGATACCAAATATGGTGTAGCCGATTACTAGTCATTAATTAGAATGAGAGAATGATCTTTATTAATGAAGTTTCAGCCCTTAAATAGGCAAAGGAACTAACTAAAAGTGGTTAAAGGCACATGCTACTCACATGGCATACTAAATAGATAACTAGCTTAATAGGCATATAATCGGCTACATCAGAAAGTGTCCATGAAAGTTTTTTTATCATGGACACTTTAGCATTGGAAACATGCAATTTCAGCTATTTATTGCAGGGTCTGGTTGAAAGGAACTCTTATGTTTTTCAATATAAAATCCAGATTGGAAACACTAAGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAATTAAACTTAAAAACACTACATATATTTACAAGTTTCTTTGCTTTGTTATCTACCTCCTTCCCATGTTTTCAAAAACCAAGTCAAATTTTGAAAACTACAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTGAAATTTGGCTAGGAACTCAAATGTGTCTTTAACAAGGATGAAAATCATTGTAAGGAGATTGAATGAAAACAAGCATAATTTTCAAAAATCAAAAACCAAAAACCAAATGGTTATCAAATGGTTATATTTCAGTTTTTATTGGGACAAGATTAATAGTTTTGTATAATATACAGGTCGAGTTATAGAATTTCTTGGAGAAAAACTATTATTTGTAAATGGTTGAAGGTACGACTTGTCGTGGGTCGTATTCAAATAAAATTTGTAAACTCCGGCACTCACCTACTTTGCAGTAGTAGTGGCCAGGTTGTTCGACGTCCATAAGGAAGGGAGTTCTGGTTTCTATGAGGTGACACAAAAAGGGGGGTTTTGGATGAAAAAGGGGAGATTTGTCATGAATAGAATGAAATAAAAATACAAGAAAGATAAACATGTCGGAAAATTGTAAAGCATGCAAGACGAGAAAATTTGATTAAAACTATCAAAGGGAAAGGTCGTTGGATTGAGATTTTTATGTTAGATTACTTGTCACTTGGTTTCCTAGTTTGCTCTAAAAGTCAATTTCAGGAATTATAATTTGAGCCCAGTATTGCTTCTTGGTTACACAGAGGATCCTCCTATCAAACCTGTGCTTAATCGATTATTTGACCCGAGATCCCACAATTAAGCTAATCTATTAATTAGGAATTTCGCCCGCTACCCCTCATGCATAGCCCGATGAACACCACAACTATCTCTAATTAGTTTAAATAAACAACCCGAGATCTCGCAATTGCCTACCCTAACTAATCACTTTACATACAAGGGTCCGGAATTGAACAAATCAAATAGAATTTAAATTCTAAATTAATTCATTACAACTTTTCCATGGATCTTAGGCTTATCAAGAATCTACGCTAATTATATATGCAATTAGCGATGGCCTTGCCTTGACCTAGTGACTATCTAGAATAACAAATAGGTTGAATTCGATTTAATCCTAAGAGTTGTCAGTTCAAGGAAATCCATCCAAAACAACGATTGAAACGAGAAGCCATGGAAGCATCAAATAACTTCATAAAATATCAATGAAAAACCAGCAAATTCAACCAAAGTGTTCAAGTAATCCAACAATCAACCCAATCCAACGACCCAATCCAACGATACAAAGAAATTAGTTATGCATAATGTAAAGATACAACACAATTGAATGATAAAAATGCATATAAACTAAGTTTAAAACCTAAAGGGAATTGAAAGAACAAGGAGAGAAAGCTGGAAGACTTAAGTATATCAAAATCTAACCTAAATGGTGGACTAAAACGAAGCATGTATTTAGGGATCCTGAATAAAAGTTTTGTTGTAAAGTTTTAGCTTAAATTATTGTTTGTATTTCAAAATATTTTTATTTAAAAAGGCCTCCAAAGCATGCATTGTCGTAACGGTCCCGAAAATATTATTTAAGAAGTCGGGTCGTTACAGTTGGTATCAGAGCCCAGTTAATGGTTCTGTAGACTGCTTACATCATAAGCTTATGTGTCCTCATGGCTAAATAACAAGATTCTCATTCAAGATCACTTATATTGTATACTAATTGGTTCAAAAGAAACCAAAGAATATTTGATGATAAATAATTTCTAAAAGATGAGATAAAAGTGGTATTTGCAGCTGTAAAACAAAGTTTGAGATACAAATCAAAGCTTGAAGATATATTTTCTTTCAAAAGCTTAGCTGGCAAGCTTAGAAACCCTAGTTGGAGCCTTCAACAGATCTTTGGATGTTTCAAATTGTCCATCATCAGATGTCATGTTATTTAACATGACAATTTCAAATTTCATTTCGTGTTTATTACAGAAATTATTTTCCCTTTCATGTTATGTTTATGAATTGGGAAGTTCTTTTTTTATTTTTATTTTTATTTTTTAAAACAAGAAATGAAACTTTTCATTGATATAATGAAAAAAGACTAGTGTTCAAAAGATACAAACTCCACAAGGGAGGGATAAAAAACAAAGAAAACAGAAATATAAAGATAAAATTATACACAAGAAATAAAGCATTCCAATTAAGATAATTGTCCTAGATAGAATAATTATCAACAAGCTCAGAGAGAGAACACCATGAAGACGCCTTTAAAGGAGCTGAATCAAGCCGATCGAACTAGAGGAGATGAGAATGTTGAAAAATCCGTTTGTTTCGTTCCATCCACAATTCTGATAGTAGAGCTTTCATAGCATTGTACCACAAAATTTTGGAGTTTGGTGCTAAAGATAGCCCGATTAAAACAGAAGCAACATTGTCCTTGAAAGTCTGGGAGAAAACCCAGTGAAGATTGAAAAAGGAGAAAACAAACCTTAGAATAAGAACCTTCAAAGAAAATATGGTTCAAAGAATCCTTAGCCAATTGGCATAAGATACAAACGGGTGACACAAGACAATGAGAAGAAGCTTCCTTTGTAAAATCTTTGAAGAGTTTAGGAACCGTTAAGCATGATCCACAAAAGAATATTAATTATTTTTGGATTCTTAGATTTCTACAGAGCATTAAACATCTCTTTTTCCAAAGGAGAGGAAGGAGCCGAATGTCGAGTTAGAGACTTCACTGAAGAAAAACCTGTAGGTTCTAAAGACCATACCTATTTATCATCAATGGGAGCAATGTTAACTGAAGATAAACTTCCCAATAAAGACTAAAATCAAGAATCTCCTCCTCCTTCAATAGCCGATGGAAGATAACGTTCGAAGATAAATGAGAAGCATCCCAAAAATCTAAGACCGAATCGTTAGATGAAGTAGATATAGAATATAATTGCGGAAAAACCGGCTTTAGTGGGCGATTGGCAATCCATGGGTCATTCCATAACGAAATCCTTTCTCCATTCCCCAATTTGGAATGAGCAAAAGATTCTATACGCTTCCAAACAGTAGAGATACTCATCCAAGAACTTCTAAGAATAAAATAGCTTCTTCTAGCCGAGTGCCAACCAAAAACTAAAGAGCCATGAATGCTAACAATAACCATTTTCCAAAAGAAATGTGGCTCATGAATAAATTTCCATCCTCATTTTGCCAAGAGAGCAAGGTTTCGATGTTTTAATGCACCAACCCCAAGACCTCCATCAAACCAGAGATTTTGAAGTTTGATTCCATCTTACCAAATAATTTATTTTGCCTCCTTCTCGACCTTCCCAAAAGAAATTCCGAATCAACAGCTTCAAGTCCAAACTAACTTGAGAAGGTAAAAGAAATAGAGACATATAGTATAAAGGAATACAATAGAGAACCGAGTTACAAAGAATTAACCGACCACCTCGAGGCAAATTAAAATGCTTCCATCTATCCATTTTTTTTTTCAAGTTCTATTTTTTATTCACTTTGCTTTTTGTTTCTTCTTCGGGGGTTTGGGGTTTGTGGTTTTCAGTATTAGCCTCTTTTCATTATTTCAATGAAAATTATGTCTTTGGTTCAATATATATATATATATATATCCTGCATTTGAAATCTTTTGTGCTGGTTATGTTAGTGCCCTATACTGTTGATCTGTAGGTCATGTTTAGTAGGCCCATTCGCTGGATTTTTGCCCTCCACGGAGATGTAGTTGTTCCATTTTCATATGCTGGTGTTTTAAGGTGATATTTGATCTCTTCCTGCATCCCTTCATCTTTGCTATCTCCTTGTGGAATGTGAGACTTGTTCATGAGAAAAATGTTAACATCCTAAATCGAGTGATATGATGTTATATTTGTGAAGCTAGGCGGTGATAGAAAAATATACGGTGATTGTTAAATGGCCACTAAACCTATTGAGCTTTACCTCATAGGTTAAGCTGTATTAGTTTTGTTTTCATGTGTGGGCTTATATATTCATATAGCTCAACAGCTGAGCTGCTGATATCAATTGGTTCTTGCCTTGAACAATGGTATATATCTTGACAAAATGGTAAGTATGGTAAAGTTTTGGGGAAATTTTCTATATCCAATATTTTTTTCAATTAGAAATATTCCCTTTATATTTATAACTTACAAGAACAAAACTGGGACTAGTGAATTACATAAAGGCTCTCCAATTGGTTTTTTAAATTTTTTTTTTTTTTTCAAATATTTAATTAATGCCTCCCACACGCGTCATGTATTTTTGTTGCAAGGTTACAGTTATCTTTTTATTTATTTTGCATATTGTCTTATTGATATACCTACACATTGACATCACTCAACTTTTCTGTCCAGTGGGAACATAACCTATGGTCTTCGTAACACTTCTACAGCCATGGTCAAGGTAAGTAGTATGATGTAAAAACTCAACCATTAGTTATTCCCAATGGATATCCCATCTGTACAAGGAACAAGGCTTTAAATAAGCCCAAAGCCAGCCAACCTTGAGCCTAAATGACTTAAAAGCCTAATCTAAAAAATAATAAAATAGTAACAAACTAATAATAAATCTATTTAAAACCTATCTTAAAAGAACACTAGATCAGTCAGTATATTTCTTTAGTGTACAAATTCCAACCATCAAGTAACTCAATTCTTTTTTCTGTAATTAACTTTGTTTGAATTTCTACCATATAATTTCATAAGCATTTTAATTCTAAGGCTGGTATTCCTTTATGCAACTTCAAGTTTCATGGGGCTGGTCTTTGCCCACTTTTGTATGTAGTTCTCTTGATTCTTCTTAATGAAAGCTTTTGTTATAATTTAAAAAAAGAAAAAAAGATTCCACAAGCATCTTAATTTTTTTTTCTTGAATAAGAAATAAAACTTTTAATTGATATAATGAAAAAAAAAAACTATGGCTCAATGGACTCCATGAGGGAGTGAAAAAGAAAGCAATGAGAAAGCAATAAAAGACGGAACAAGATTGCAATGGAAAAATAAAAGCATTCCAGTTAAGACATATATCCTGTAAAGGGAAATCAACATCTTAATTCTAAAGGCTTGGATTTATTTTTCCCCCTGGTTTTGGATGTAATTCTCTTCATTCTTCTTAATAAAAACCTTTTTCATTATCTAAAACAGAAAAAAAATCATAAGTTTCCCTAAAATATCTTAATTCAAAGGCTTTGGTTCCTTTTCTAAACTTCAATTTTGGAGGGGCTTTGTTTTTTCCTGCTTATGGATGTAATTCTTGTCATTCCTTTTTTTTTTTCTTCTACAATTTCATTTATTAAATGAAATTTACAGAAGGGTAAACTCATCTATAGAAATTACAGAAAACTTCTTCAGCTGGATAAAAGTGAATTTAAACTATAATTGCTAAAAGGAAGATCAATTTTACTCCAAAATAGGAAACTTGTCATTCTCTTTAATTAAAACTTCTGTCCTTATTTCGGAAAAAGAAAAAATAAATAATTTAAGGCTTTACTATAGCAGTGAAGACAGATTGCATCAAAGAGTTCATTGTTAAATCCTTCTGGGCCATTTAATTGAGATGGTTTATATCTTACATGAGGTCTAATTACCAAACGTTATTTTATTTTTGAAAAGAATTACCAAACTTATTTGATCAAGTAACAGCCCTGTTTTTTTTTTTTTTTTTTTTTTGATTGCATGTGCTAGAGACCATTCAATCAATGTTTTAGTATGCCTAGCACATACTCAGTATGCAATATTTTCTTGTTTTTGTAATATTTGATTGTGGCTTTGGACCCTGTCACAGATACATAGTGCGGAATCTTTTATGGGAGCAATGAAGGATGCTAAAATTAATCTGGAAGTTGAGGTGTGATTAAGAAATTTTTTATGACCGTGAAAGCATACTTTAGTTTACAACGAGCTAGATTACTCTTTCACCAGAAATACGTTTTTACATAGTGCAAGTGATCAAACGCAATTTTGTAGTCATTTAAATACATCAATGCTCTTATAAGCCGCCATTTGTTTTTGTCTACACATTGCTGTTTTGGCTGCATTTATTAAATGTATTTTAAATCTTTTCCTATTTTAGGACTTCTTAAATCTCATCCTACCTACTTCATAAGTTCATTTTATGTGTTTTTTTTTAATAGTTTGAAGTCTACTTACTTTCACAGGAACGTAAAAGAAAAATATTGGACCAGTCTTCCATACTGGCACAAAGTGTCGAAGGGCAAATTGTTATTCAGGAGGTCTTACTTGATGAGGTGATGTAGTTGTGAGGTTCTTGATTTCATGCTTCTAACCATGTTCTAAATCTCTTAAGATAACGTTGTAGGTTGTAAATCTCGTTGAGTCACCTGTTTCAATACTTGGAAAGTTCGATGATTCCTTCTTGGAGCTTCCAGAAGATCTTCTAACAATGGTAAGGTTTTTGCTGTAGACTGAATAATTTGGTCGACAATCTTTATTTAGTGGTTAATGATTATCATTTTATGAATTTGATAGGAATACTATTAAGATAAAATATTAGTAAGAGTTTGAATTTTAATGGTTAAAATGGGTTGGAGGGGTTGGATGCAGGTTAATTTTTGGAATAGTTTATGCTTTGATAAAGGTAGGTTATGGGGGCAGGCATATACGGGAATACTTTTTATTTTCTTTCTTTGGAAACAAAATCCTTCCTTCAAGAATACTGTTGGGAATTGGGAATGCAACCAAAGTCCCACATTGGCTAGATAAGGGGATGATCATGGATTTATAAGGGAGGACAAGTATCTCCATTGGTATGAGGCCTTTTGGGTGAAACCAAAAGTAAAGCCATGAGGGCTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATCTATGTCGTGTCCTCGTCCTTAACAAGTGGTATCATAGCCAGGTTCGTGTTATTCTGTAACAGTTTTTCAGCGTACAAGGATGTCAGCTATGAACGTGAAGACCGACAAATTCATCGGGAGGAACAGTTTTGGTCTGTGGCAGATCAAGATGCGATCTCTGCTAAAGCAGCAGGGATTATGCGCGCCGCTGTCTGGTATGGAGAAGGCGGACACTGATGAAGAAGAATGGAAAACCTTGGAGGAGAAGGTCCATTCCACGATTATGTTATGTCTGGCTGATGATGTCATCATCGAGGTTGCGAATGTGGATACTGCCGCCAGTCTTTGGTCTAAGCTCGAGAGCCTCTGCATGACGAAGTCTTTGACTAAGAAGTTGCTCTTGAAGCAATGTTTGTTCAGTCTGCGAATGTAGGAAGGTACGCCCCTTAGAGATCACATAGATCAGTTGAACTCTATTTTGTTGGATCTACGTAATCTTGAGGTTATGGTAGATGATGAGGATGCTGCTTTGATTCTGTTAGTATCTTTGTCGTTGCCGTATGAGAATTTTGTAGATTCTTTTATTAGTGGTAAAGATAAGTTGTCTCCAGAAGAAGTAAAAACAGCCCTTCTGACTAGAGAAGTCCGTCATAAAGTAGCAGGTTCGGTTGCAGAAAATCAGGCATCTGGGTTGGTTGCTTCGAGTAGTAAAGGACATAGGAAATCTGGTAAAAAGAAGTCTAATGGTAAAAACTCGAAGCCTAATAAAACTAATCCTAGAGCGAATGACATCTGTAATTACTGTAAGAAAATGGGCATTTGAAATATGACTGTAAAAAGAAGAGTAATAGGTATAAAAAGAAGGAAGGTTCTGCCGCTGTGGCAGAACCTAATACTGATTCAGATGATGACTTAGCCCTAGGTGTAAATGAAGAACCATGTCTTAAAGATTTGTGGGTTCTTGATTCTTGGGTGTCGTATCATATGTGTCCAAATAGAGAGTGGTTTTCAACTTATCAGCAGGTAGATGGTGGTAATGTCACTATGGCTAACAACGCTGTCTGTAAGGTAGTTGGGATAGGCTCAGTCAGGATACGGACACATGATGGTTTTTTCTGCACTTTGGATGAGGTTAGGCATGTTCCACTCATGACCAAGAGTCTGATATCTTTGAGTGTTTTAGACAGTAAGGGTTTCAGTTTCAGAGGTGAAGGTGGAGTTACTTATGTCTGCAAAGGTTTCAAGGTGGTTCTGAAAGGTGTCAAGCGTGGAACTCTGTATTATCTGGCAGGTTCTACGCTGACTAGTTTTGCTGCTGTTGCATCCTCTACAGTTCACAAAGATTATACGACTAAGTTGCGGCATATGAGACTTGGTCATATGAATGAAAGAGGGATGCAAATTTTGTCAAAGAGAGATCTTCTTTGTGGACACAAGGTGCAGGATCTTGAATTTTGTGAGCATTGTGTGTTTGGCAAGCTTCGTCGCAGTAAGTTTCCAAAGGGTGTTCACAGTACGAAGGGAACACTTGATTATGTTCACTCTGATTGTTGGGGTCCTTCTCAAATCTGTTGGAGGTAGTAGATATTTTTTGTCTATCATTGATGACTACTCAGGAATGACTTGGGTTTTTATGATGAAGCTCAAAAGTGAAGCCTTCAAGAATTTCAAGCAGTGGAAGACCTTAGTAGAAAATCAAACTGGGAAGAAGATCAAAAGGCTACGAATTGATAATGGTCTGGAATTCTGTGGATCTGAGTTCAATGAGTTTTGCAAGAATGAGGGGATTGCCCGTCATCGCACCGTTAGAGATATGCCACAACAAAACGGGGTGGCAGAACGAATGAATCAGACACTTTTTGAGAGAGCAAGATGCATGCTTTCTAATGTTGGGTTACCTAGAAGATTTTGGGCAGAAGCAGTAAGCACAGCGTGTTATTTGATTAACCGAGGACCTCATACAGGTATTGATTGCAAAACACCTTATGAGGTGTGGTCTGGTAAGCCTGCAGATTACTCTTTGCTGAAAGTTTTTGGTTGTTCAGTTTATTATCATGTGAATGAGGGTAAATTAGAACCTAGAGCTAAAAATGGTATATTTGTGGGATTTGGTGATGGGGTCAAAGGTTATAGGATCTGGTCACCTTCTTAAAATAGAGTTATATCAGTAGAAATGTTGTGTTTGATGAAAATTCTATGTTTAACTCTGTTGTGAAGCCCGCTGTTGCAGAAGAAAGTAGTGATGTTGATAAACAGGTGGAGCTGCAATTATCTTCTGGTCAGGATGAATCGTAGCACCATGGTGGAGAAGATCAACATGTTGCTAAAGAAACTGATGTGCCAGTTGTTGATACAGGTACAAGAACAGATGAGCCAGAGTCTTCTAGTTCAGAAACAGCACGTCAGCCAAGTATAGCTCTTGATAGAGCTAGGAGAGTTGACATTCGACCCCCACAGAGGTATGATTTTGAGGATATGATTGCTTATGCACTACAGGTTGCTGAAGAGGTGGATCCCCATGAACCGTCCACCTATAGAGAAGCTGTTTCGAGTAGTGAGTCTGCTCAATGGCTTGCTGCAATAGGAGATGAGATTGAGTCACTTGATAAACATCAGACTTGGGAGCTAGTCAAACGACCTAAGGAAAGAAAGATTGTTACTTGCAAATGGGTCTTTAAGAAAAATGAAGGAATCTCACCTATAGAGGGTATTAAGTTTAAAGCTCGAGTTGTTGCAAGAGGGTTTACACAGAGAGAAGGAGTTGACTACAATGAAATATTTTCACCAGTAGTCAGACATACTTCCATCAGGGTGCTTCTAGCCATGGTTGCACATCAGAATTTAGAACTTGAGCAACTAGATGTGCTTTCTTACATGGAGAGTTGGAGGAGGAGATTTATATGA

mRNA sequence

ATGATTTTATCATGGTTCCTTAAGACTCTTTTCCATGTTTCAGGAAAGACAGAATATCTATATGCTCGTATAATGGAGTCTTCTCGGCTTGCTTTGGAGATTTTCTCTGAGAATTTACCTGGCATTGTAGCTAGAATATCATTCCCAAAGTCGATGAGGTGGAACTCTCAGGTCATGTTTAGTAGGCCCATTCGCTGGATTTTTGCCCTCCACGGAGATGTAGTTGTTCCATTTTCATATGCTGGTGTTTTAAGTGGGAACATAACCTATGGTCTTCGTAACACTTCTACAGCCATGGTCAAGATACATAGTGCGGAATCTTTTATGGGAGCAATGAAGGATGCTAAAATTAATCTGGAAGTTGAGGAACGTAAAAGAAAAATATTGGACCAGTCTTCCATACTGGCACAAAGTGTCGAAGGGCAAATTGTTATTCAGGAGGTCTTACTTGATGAGGTTGTAAATCTCGTTGAGTCACCTGTTTCAATACTTGGAAAGTTCGATGATTCCTTCTTGGAGCTTCCAGAAGATCTTCTAACAATGCGTACAAGGATGTCAGCTATGAACGTGAAGACCGACAAATTCATCGGGAGGAACAGTTTTGGTCTGTGGCAGATCAAGATGCGATCTCTGCTAAAGCAGCAGGGATTATGCGCGCCGCTGTCTGGTATGGAGAAGGCGGACACTGATGAAGAAGAATGGAAAACCTTGGAGGAGAAGGTCCATTCCACGATTATGTTATGTCTGGCTGATGATGTCATCATCGAGGTTGCGAATGTGGATACTGCCGCCAGTCTTTGGTCTAAGCTCGAGAGCCTCTGCATGACGAAGTCTTTGACTAAGAAGTTGCTCTTGAAGCAATATGATGAGGATGCTGCTTTGATTCTGTTAGTATCTTTGTCGTTGCCGTATGAGAATTTTGTAGATTCTTTTATTAGTGGTAAAGATAAGTTGTCTCCAGAAGAAGTAAAAACAGCCCTTCTGACTAGAGAAGTCCGTCATAAAGTAGCAGGTTCGGTTGCAGAAAATCAGGCATCTGGGTTGGTTGCTTCGAGTAGTAAAGGACATAGGAAATCTGAAAATGGGCATTTGAAATATGACTGTAAAAAGAAGAGTAATAGGTATAAAAAGAAGGAAGGTTCTGCCGCTGTGGCAGAACCTAATACTGATTCAGATGATGACTTAGCCCTAGGTGTAAATGAAGAACCATGTCTTAAAGATTTGTGGGTTCTTGATTCTTGGGTGTCGTATCATATGTGTCCAAATAGAGAGTGGTTTTCAACTTATCAGCAGGTAGATGGTGGTAATGTCACTATGGCTAACAACGCTGTCTGTAAGGTAGTTGGGATAGGCTCAGTCAGGATACGGACACATGATGGTTTTTTCTGCACTTTGGATGAGGTTAGGCATGTTCCACTCATGACCAAGAGTCTGATATCTTTGAGTGTTTTAGACAGTAAGGGTTTCAGTTTCAGAGGTGAAGGTGGAGTTACTTATGTCTGCAAAGGTTTCAAGGTGGTTCTGAAAGGTGTCAAGCGTGGAACTCTGTATTATCTGGCAGGTTCTACGCTGACTAGTTTTGCTGCTGTTGCATCCTCTACAGTTCACAAAGATTATACGACTAAGTTGCGGCATATGAGACTTGGTCATATGAATGAAAGAGGGATGCAAATTTTGTCAAAGAGAGATCTTCTTTGTGGACACAAGGTGCAGGATCTTGAATTTTGTGAGCATTGTGTGTTTGGCAAGCTTCGTCGCAGAATGACTTGGGTTTTTATGATGAAGCTCAAAAGTGAAGCCTTCAAGAATTTCAAGCAGTGGAAGACCTTAGTAGAAAATCAAACTGGGAAGAAGATCAAAAGGCTACGAATTGATAATGGTCTGGAATTCTGTGGATCTGAGTTCAATGAGTTTTGCAAGAATGAGGGGATTGCCCGTCATCGCACCGTTAGAGATATGCCACAACAAAACGGGGTGGCAGAACGAATGAATCAGACACTTTTTGAGAGAGCAAGATGCATGCTTTCTAATGTTGGGTTACCTAGAAGATTTTGGGCAGAAGCAGTAAGCACAGCGTGTTATTTGATTAACCGAGGACCTCATACAGGTATTGATTGCAAAACACCTTATGAGGTGTGGTCTGGTAAGCCTGCAGATTACTCTTTGCTGAAAGTTTTTGGTTGTTCAGTTTATTATCATGTGAATGAGGGTAAATTAGAACCTAGAGCTAAAAATGGTATATTTGTGGGATTTGGTGATGGGGTCAAAGAAGAAAGTAGTGATGTTGATAAACAGGTGGAGCTGCAATTATCTTCTGGTACAAGAACAGATGAGCCAGAGTCTTCTAGTTCAGAAACAGCACGTCAGCCAAGTATAGCTCTTGATAGAGCTAGGAGAGTTGACATTCGACCCCCACAGAGGTATGATTTTGAGGATATGATTGCTTATGCACTACAGGTTGCTGAAGAGGTGGATCCCCATGAACCGTCCACCTATAGAGAAGCTGTTTCGAGTAGTGAGTCTGCTCAATGGCTTGCTGCAATAGGAGATGAGATTGAGTCACTTGATAAACATCAGACTTGGGAGCTAGTCAAACGACCTAAGGAAAGAAAGATTGTTACTTGCAAATGGGTCTTTAAGAAAAATGAAGGAATCTCACCTATAGAGGGTATTAAGTTTAAAGCTCGAGTTGTTGCAAGAGGGTTTACACAGAGAGAAGGAGTTGACTACAATGAAATATTTTCACCAGTAGTCAGACATACTTCCATCAGGGTGCTTCTAGCCATGGTTGCACATCAGAATTTAGAACTTGAGCAACTAGATGTGCTTTCTTACATGGAGAGTTGGAGGAGGAGATTTATATGA

Coding sequence (CDS)

ATGATTTTATCATGGTTCCTTAAGACTCTTTTCCATGTTTCAGGAAAGACAGAATATCTATATGCTCGTATAATGGAGTCTTCTCGGCTTGCTTTGGAGATTTTCTCTGAGAATTTACCTGGCATTGTAGCTAGAATATCATTCCCAAAGTCGATGAGGTGGAACTCTCAGGTCATGTTTAGTAGGCCCATTCGCTGGATTTTTGCCCTCCACGGAGATGTAGTTGTTCCATTTTCATATGCTGGTGTTTTAAGTGGGAACATAACCTATGGTCTTCGTAACACTTCTACAGCCATGGTCAAGATACATAGTGCGGAATCTTTTATGGGAGCAATGAAGGATGCTAAAATTAATCTGGAAGTTGAGGAACGTAAAAGAAAAATATTGGACCAGTCTTCCATACTGGCACAAAGTGTCGAAGGGCAAATTGTTATTCAGGAGGTCTTACTTGATGAGGTTGTAAATCTCGTTGAGTCACCTGTTTCAATACTTGGAAAGTTCGATGATTCCTTCTTGGAGCTTCCAGAAGATCTTCTAACAATGCGTACAAGGATGTCAGCTATGAACGTGAAGACCGACAAATTCATCGGGAGGAACAGTTTTGGTCTGTGGCAGATCAAGATGCGATCTCTGCTAAAGCAGCAGGGATTATGCGCGCCGCTGTCTGGTATGGAGAAGGCGGACACTGATGAAGAAGAATGGAAAACCTTGGAGGAGAAGGTCCATTCCACGATTATGTTATGTCTGGCTGATGATGTCATCATCGAGGTTGCGAATGTGGATACTGCCGCCAGTCTTTGGTCTAAGCTCGAGAGCCTCTGCATGACGAAGTCTTTGACTAAGAAGTTGCTCTTGAAGCAATATGATGAGGATGCTGCTTTGATTCTGTTAGTATCTTTGTCGTTGCCGTATGAGAATTTTGTAGATTCTTTTATTAGTGGTAAAGATAAGTTGTCTCCAGAAGAAGTAAAAACAGCCCTTCTGACTAGAGAAGTCCGTCATAAAGTAGCAGGTTCGGTTGCAGAAAATCAGGCATCTGGGTTGGTTGCTTCGAGTAGTAAAGGACATAGGAAATCTGAAAATGGGCATTTGAAATATGACTGTAAAAAGAAGAGTAATAGGTATAAAAAGAAGGAAGGTTCTGCCGCTGTGGCAGAACCTAATACTGATTCAGATGATGACTTAGCCCTAGGTGTAAATGAAGAACCATGTCTTAAAGATTTGTGGGTTCTTGATTCTTGGGTGTCGTATCATATGTGTCCAAATAGAGAGTGGTTTTCAACTTATCAGCAGGTAGATGGTGGTAATGTCACTATGGCTAACAACGCTGTCTGTAAGGTAGTTGGGATAGGCTCAGTCAGGATACGGACACATGATGGTTTTTTCTGCACTTTGGATGAGGTTAGGCATGTTCCACTCATGACCAAGAGTCTGATATCTTTGAGTGTTTTAGACAGTAAGGGTTTCAGTTTCAGAGGTGAAGGTGGAGTTACTTATGTCTGCAAAGGTTTCAAGGTGGTTCTGAAAGGTGTCAAGCGTGGAACTCTGTATTATCTGGCAGGTTCTACGCTGACTAGTTTTGCTGCTGTTGCATCCTCTACAGTTCACAAAGATTATACGACTAAGTTGCGGCATATGAGACTTGGTCATATGAATGAAAGAGGGATGCAAATTTTGTCAAAGAGAGATCTTCTTTGTGGACACAAGGTGCAGGATCTTGAATTTTGTGAGCATTGTGTGTTTGGCAAGCTTCGTCGCAGAATGACTTGGGTTTTTATGATGAAGCTCAAAAGTGAAGCCTTCAAGAATTTCAAGCAGTGGAAGACCTTAGTAGAAAATCAAACTGGGAAGAAGATCAAAAGGCTACGAATTGATAATGGTCTGGAATTCTGTGGATCTGAGTTCAATGAGTTTTGCAAGAATGAGGGGATTGCCCGTCATCGCACCGTTAGAGATATGCCACAACAAAACGGGGTGGCAGAACGAATGAATCAGACACTTTTTGAGAGAGCAAGATGCATGCTTTCTAATGTTGGGTTACCTAGAAGATTTTGGGCAGAAGCAGTAAGCACAGCGTGTTATTTGATTAACCGAGGACCTCATACAGGTATTGATTGCAAAACACCTTATGAGGTGTGGTCTGGTAAGCCTGCAGATTACTCTTTGCTGAAAGTTTTTGGTTGTTCAGTTTATTATCATGTGAATGAGGGTAAATTAGAACCTAGAGCTAAAAATGGTATATTTGTGGGATTTGGTGATGGGGTCAAAGAAGAAAGTAGTGATGTTGATAAACAGGTGGAGCTGCAATTATCTTCTGGTACAAGAACAGATGAGCCAGAGTCTTCTAGTTCAGAAACAGCACGTCAGCCAAGTATAGCTCTTGATAGAGCTAGGAGAGTTGACATTCGACCCCCACAGAGGTATGATTTTGAGGATATGATTGCTTATGCACTACAGGTTGCTGAAGAGGTGGATCCCCATGAACCGTCCACCTATAGAGAAGCTGTTTCGAGTAGTGAGTCTGCTCAATGGCTTGCTGCAATAGGAGATGAGATTGAGTCACTTGATAAACATCAGACTTGGGAGCTAGTCAAACGACCTAAGGAAAGAAAGATTGTTACTTGCAAATGGGTCTTTAAGAAAAATGAAGGAATCTCACCTATAGAGGGTATTAAGTTTAAAGCTCGAGTTGTTGCAAGAGGGTTTACACAGAGAGAAGGAGTTGACTACAATGAAATATTTTCACCAGTAGTCAGACATACTTCCATCAGGGTGCTTCTAGCCATGGTTGCACATCAGAATTTAGAACTTGAGCAACTAGATGTGCTTTCTTACATGGAGAGTTGGAGGAGGAGATTTATATGA

Protein sequence

MILSWFLKTLFHVSGKTEYLYARIMESSRLALEIFSENLPGIVARISFPKSMRWNSQVMFSRPIRWIFALHGDVVVPFSYAGVLSGNITYGLRNTSTAMVKIHSAESFMGAMKDAKINLEVEERKRKILDQSSILAQSVEGQIVIQEVLLDEVVNLVESPVSILGKFDDSFLELPEDLLTMRTRMSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEKADTDEEEWKTLEEKVHSTIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQYDEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALLTREVRHKVAGSVAENQASGLVASSSKGHRKSENGHLKYDCKKKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHMCPNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLISLSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDYTTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRRRMTWVFMMKLKSEAFKNFKQWKTLVENQTGKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCMLSNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVNEGKLEPRAKNGIFVGFGDGVKEESSDVDKQVELQLSSGTRTDEPESSSSETARQPSIALDRARRVDIRPPQRYDFEDMIAYALQVAEEVDPHEPSTYREAVSSSESAQWLAAIGDEIESLDKHQTWELVKRPKERKIVTCKWVFKKNEGISPIEGIKFKARVVARGFTQREGVDYNEIFSPVVRHTSIRVLLAMVAHQNLELEQLDVLSYMESWRRRFI

Homology

[Close]

BLAST of Lag0015502 vs. NCBI nr
Match: ABO36622.1 (copia LTR rider [Solanum lycopersicum] >ABO36636.1 copia LTR rider [Solanum lycopersicum])

HSP 1 Score: 991.5 bits (2562), Expect = 5.0e-285
Identity = 540/907 (59.54%), Postives = 621/907 (68.47%), Query Frame = 0


Query: 185 MSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEKADTDEEEWKTLEEKVHST 244
           MSA+NVK DKF GRNSF LWQIKMR+LLKQQG  APLS  +K      E   LEEK HST
Sbjct: 1   MSALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLS-KDKNAVVTPEMAILEEKAHST 60

Query: 245 IMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQ----------------- 304
           IMLCLADDVI EV++ +TAA LW KLESL MTKSLT KLLLKQ                 
Sbjct: 61  IMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHL 120

Query: 305 -----------------YDEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALLTR 364
                             DEDAALILLVSL + +ENFV SFI GKD +S EEV++AL +R
Sbjct: 121 EQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSR 180

Query: 365 EVRHKVAGSVAENQASGLVASSSKGHRK---------------------SENGHLKYDCK 424
           E+RHK  G+  + Q SGL  SS KG +                       E GH K+DC 
Sbjct: 181 ELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCP 240

Query: 425 KKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHMCPNREWFSTY 484
           KK  + +K+  SAAVAE +T+S++D+AL  +E     D+WVLDS  SYH+CP REWF+TY
Sbjct: 241 KKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRREWFTTY 300

Query: 485 QQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLISLSVLDSKGF 544
           +QVDGG+++MAN++VCKVVG GS++IRTHDG FCTL+EVRHVPLMTK+LISLS+LDSKGF
Sbjct: 301 EQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGF 360

Query: 545 SFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDYTTKLRHMRLG 604
           S+ G+ GV  V KG  ++LKGV RGTLY+L GST+T  A VASS  H+   TKL H+RLG
Sbjct: 361 SWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLG 420

Query: 605 HMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR----------------------- 664
           HM ERGMQILSK DLL GHKV+ LEFCEHCVFGKL R                       
Sbjct: 421 HMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWG 480

Query: 665 ---------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQTGKKIKRLRID 724
                                RMTWV+MMK KSEAF+ FK+WK L+ENQTGKKIKRLR D
Sbjct: 481 PCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTD 540

Query: 725 NGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCMLSNVGLPRRFW 784
           NGLEFC SEF++FCK+EGIARHRTVR+ PQQNGVAERMNQTL ERARCMLSN GL RRFW
Sbjct: 541 NGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFW 600

Query: 785 AEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVNEGKLEPRAKN 844
           AEAVSTACYLINRGPHTGI CKTP E+WSGK ADYS LK FGC+ YYHV+EGKLEPRAK 
Sbjct: 601 AEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKK 660

Query: 845 GIFVGFGDGVK-----------------------------------EESSDVDKQVELQL 904
           G+FVG+GDGVK                                    E+  +DKQVE Q+
Sbjct: 661 GVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEFQV 720

Query: 905 SSG---------------TRTDEPESSSSETARQPSIALDRARRVDIRPPQRYDFEDMIA 943
                             T TD PES  S+     SIA DR RRV +RPP RY FEDM+ 
Sbjct: 721 IQNESDLKEPEEEDQEPQTETDIPESMPSDI--HQSIAQDRPRRVGVRPPTRYGFEDMVG 780

[Close]

BLAST of Lag0015502 vs. NCBI nr
Match: KAG7627205.1 (F-box-like domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 805.8 bits (2080), Expect = 3.9e-229
Identity = 459/891 (51.52%), Postives = 554/891 (62.18%), Query Frame = 0


Query: 185 MSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEKADTDEEEWKTLEEKVHST 244
           M AMNVK DKF GRNSF LWQIKM++LLKQQGL APLS   K  +D  E   +EEK HST
Sbjct: 1   MFAMNVKIDKFSGRNSFSLWQIKMQALLKQQGLWAPLSNDSKGKSDAAEMAVMEEKAHST 60

Query: 245 IMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQ----------------- 304
           IMLCL D+VIIEV+    +A+LW KLE+L MTKSL  KL+LK+                 
Sbjct: 61  IMLCLEDEVIIEVSGETISANLWKKLENLYMTKSLQNKLILKRRLFALRMQEGTPLKDHL 120

Query: 305 -----------------YDEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALLTR 364
                             DEDAAL+LLVSL L YENFV+SFI  K  ++ EEV++AL +R
Sbjct: 121 DQLNSVLLELRNIDVKVEDEDAALLLLVSLPLSYENFVESFIVNKATVTLEEVRSALHSR 180

Query: 365 EVRHKVAGSVAENQASGLVASSSKGHRKSENGHLKYDCKKKSNRYKKKEGSAAVAEPNTD 424
            +RH+ AG+V + QASGLVAS S G   ++    + DC K     +K++GSAAVAE +  
Sbjct: 181 VLRHQAAGTVTDYQASGLVASGSSGLGHAKKNRSRNDCPK-----RKQQGSAAVAEDDNK 240

Query: 425 SDDDLALGVNEEPCLKDLWVLDSWVSYHMCPNREWFSTYQQVDGGNVTMANNAVCKVVGI 484
           S+ D+AL         D+WVLD   SYHMCP REWFSTY QV+ G + MAN++V +V GI
Sbjct: 241 SEHDVALVAAGNAHNSDVWVLDRGASYHMCPWREWFSTYAQVENGCIKMANSSVSQVAGI 300

Query: 485 GSVRIRTHDGFFCTLDEVRHVPLMTKSLISLSVLDSKGFSFRGEGGVTYVCKGFKVVLKG 544
           GS++IRTHDG FCTL++VRHVP M K+LISLS+LDS+G  + G  G+  V +G  V+LKG
Sbjct: 301 GSIQIRTHDGRFCTLNDVRHVPSMEKNLISLSLLDSRGLKYSGGDGILQVYQGSHVILKG 360

Query: 545 VKRGTLYYLAGSTLTSFAAVASSTVHKDYTTKLRHMRLGHMNERGMQILSKRDLLCGHKV 604
           V  GTLY L G T+   + VAS+ +HK+  TKL HMRLGHM+ERGMQILSK DLLCGH+V
Sbjct: 361 VISGTLYILQGFTVIGTSNVASAEIHKEDMTKLWHMRLGHMSERGMQILSKEDLLCGHEV 420

Query: 605 QDLEFCEHCVFGKLRR-------------------------------------------- 664
           + LEFCEHCV+GKL R                                            
Sbjct: 421 KSLEFCEHCVYGKLHRSKFPKAVHITKGTLDYIHSDCWGPARVEPLAGHRYFMSMIDDYS 480

Query: 665 RMTWVFMMKLKSEAFKNFKQWKTLVENQTGKKIKRLRIDNGLEFCGSEFNEFCKNEGIAR 724
           R TWV M+K KSEAFKNF++WK LVENQTGKKIKRL+ DNGLEFC SEFN+         
Sbjct: 481 RKTWVIMLKHKSEAFKNFREWKILVENQTGKKIKRLQTDNGLEFCSSEFNQL-------- 540

Query: 725 HRTVRDMPQQNGVAERMNQTLFERARCMLSNVGLPRRFWAEAVSTACYLINRGPHTGIDC 784
                                                     +STACYLINRGPH GI  
Sbjct: 541 ------------------------------------------LSTACYLINRGPHRGIKW 600

Query: 785 KTPYEVWSGKPADYSLLKVFGCSVYYHVNEGKLEPRAKNGIFVGFGDGVK---------- 844
           +TP E+WSGK ADYS LK+FGC+VYYHVNEGKLEPRA+ G+FVG+GDGVK          
Sbjct: 601 RTPAEMWSGKSADYSNLKIFGCTVYYHVNEGKLEPRARKGVFVGYGDGVKGFRVWSPLEN 660

Query: 845 -------------------------EESSDVDKQVELQLSSGTRTDEPESS--------S 904
                                    EESS  DKQVEL  +      +PE S        S
Sbjct: 661 RVILSRNVVFDEVSMLGRSEKSTTTEESSSFDKQVELTPNMKADVQKPEDSKELQAADGS 720

Query: 905 SETARQP----SIALDRARRVDIRPPQRYDFEDMIA--------YALQVAEEVDPHEPST 943
           ++T +      SIA +R RR+ + PPQRY +EDM          YALQVAEEVD HEP+T
Sbjct: 721 ADTIKPELKPYSIAQNRTRRIGVGPPQRYGYEDMAGFCLEDMARYALQVAEEVDTHEPTT 780

[Close]

BLAST of Lag0015502 vs. NCBI nr
Match: PPS20553.1 (hypothetical protein GOBAR_AA00016 [Gossypium barbadense])

HSP 1 Score: 721.8 bits (1862), Expect = 7.5e-204
Identity = 430/921 (46.69%), Postives = 546/921 (59.28%), Query Frame = 0


Query: 181  MRTRMSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEK--ADTDEEEWKTLE 240
            M T +S+     +KF G+NSF LW+IKMR++L QQGL   LSG +K  +   EE+   + 
Sbjct: 500  MATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDML 559

Query: 241  EKVHSTIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQY---------- 300
            E+ HS I+LCL D+V+ EVA+  TA+ LW +LES  MTKSLT +L LKQ           
Sbjct: 560  ERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGT 619

Query: 301  ------------------------DEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVK 360
                                    DED A+I+L SL   YENFVD+ + G+D L+ EEVK
Sbjct: 620  PVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVK 679

Query: 361  TALLTREVRHKVAGSVAE-NQASGLVA---------SSSKGHRKSEN------------G 420
             AL + E+R K+ G V E N+  GLVA         SSSK H +S++            G
Sbjct: 680  NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYG 739

Query: 421  HLKYDC---KKKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHM 480
            H+K DC   K+KS   +++   A VA+ ++ SD ++ L V++       W+LD+  ++H+
Sbjct: 740  HMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDS-YAGGRWILDTGATFHI 799

Query: 481  CPNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLI 540
              +++ FSTY++   G+V M N+  C+V+GIG+VRI+  DG   TL +VRH+P M K+LI
Sbjct: 800  STSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLI 859

Query: 541  SLSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDY 600
            SLS LD KGF +  EGGV  V  G   V++G     LY+L GS++T  A V+SS      
Sbjct: 860  SLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSD 919

Query: 601  TTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR------------- 660
            TTKL HMRLGHM+ERG+ +LSKR LL G     L FCEHCVFGK  R             
Sbjct: 920  TTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGT 979

Query: 661  -------------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQT 720
                                           R  WV+ +K K E   NFKQ+K L+ENQT
Sbjct: 980  VDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQT 1039

Query: 721  GKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCML 780
            GKKIKR R DNGLEFC  EFNEFCKNEGI RHRTVR  PQQNGVAERMN+TL ERARCM 
Sbjct: 1040 GKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMR 1099

Query: 781  SNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVN 840
            SN GL   FWAEAV+TACYL+NR P T I+ KTP EVWSG PADYS L+VFGC  Y HVN
Sbjct: 1100 SNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVN 1159

Query: 841  EGKLEPRAKNGIFVGFGDGVK------------------------------------EES 900
            EGKL+PRAK  IF+G+G GVK                                    +E 
Sbjct: 1160 EGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEE 1219

Query: 901  SD------VDKQVELQL-------SSGTRTDEPESSSSETARQP-----SIALDRARRVD 943
            SD      V+KQVE Q+        +  + D+ E   S+    P     SIA  R +R  
Sbjct: 1220 SDRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKR-Q 1279

[Close]

BLAST of Lag0015502 vs. NCBI nr
Match: PPR84446.1 (hypothetical protein GOBAR_AA36262 [Gossypium barbadense])

HSP 1 Score: 721.8 bits (1862), Expect = 7.5e-204
Identity = 430/921 (46.69%), Postives = 546/921 (59.28%), Query Frame = 0


Query: 181  MRTRMSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEK--ADTDEEEWKTLE 240
            M T +S+     +KF G+NSF LW+IKMR++L QQGL   LSG +K  +   EE+   + 
Sbjct: 521  MATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDML 580

Query: 241  EKVHSTIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQY---------- 300
            E+ HS I+LCL D+V+ EVA+  TA+ LW +LES  MTKSLT +L LKQ           
Sbjct: 581  ERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGT 640

Query: 301  ------------------------DEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVK 360
                                    DED A+I+L SL   YENFVD+ + G+D L+ EEVK
Sbjct: 641  PVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVK 700

Query: 361  TALLTREVRHKVAGSVAE-NQASGLVA---------SSSKGHRKSEN------------G 420
             AL + E+R K+ G V E N+  GLVA         SSSK H +S++            G
Sbjct: 701  NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYG 760

Query: 421  HLKYDC---KKKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHM 480
            H+K DC   K+KS   +++   A VA+ ++ SD ++ L V++       W+LD+  ++H+
Sbjct: 761  HMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDS-YAGGRWILDTGATFHI 820

Query: 481  CPNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLI 540
              +++ FSTY++   G+V M N+  C+V+GIG+VRI+  DG   TL +VRH+P M K+LI
Sbjct: 821  STSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLI 880

Query: 541  SLSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDY 600
            SLS LD KGF +  EGGV  V  G   V++G     LY+L GS++T  A V+SS      
Sbjct: 881  SLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSD 940

Query: 601  TTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR------------- 660
            TTKL HMRLGHM+ERG+ +LSKR LL G     L FCEHCVFGK  R             
Sbjct: 941  TTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGT 1000

Query: 661  -------------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQT 720
                                           R  WV+ +K K E   NFKQ+K L+ENQT
Sbjct: 1001 VDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQT 1060

Query: 721  GKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCML 780
            GKKIKR R DNGLEFC  EFNEFCKNEGI RHRTVR  PQQNGVAERMN+TL ERARCM 
Sbjct: 1061 GKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMR 1120

Query: 781  SNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVN 840
            SN GL   FWAEAV+TACYL+NR P T I+ KTP EVWSG PADYS L+VFGC  Y HVN
Sbjct: 1121 SNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVN 1180

Query: 841  EGKLEPRAKNGIFVGFGDGVK------------------------------------EES 900
            EGKL+PRAK  IF+G+G GVK                                    +E 
Sbjct: 1181 EGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEE 1240

Query: 901  SD------VDKQVELQL-------SSGTRTDEPESSSSETARQP-----SIALDRARRVD 943
            SD      V+KQVE Q+        +  + D+ E   S+    P     SIA  R +R  
Sbjct: 1241 SDRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKR-Q 1300

[Close]

BLAST of Lag0015502 vs. NCBI nr
Match: KAG9442664.1 (hypothetical protein H6P81_018518 [Aristolochia fimbriata])

HSP 1 Score: 676.4 bits (1744), Expect = 3.6e-190
Identity = 399/888 (44.93%), Postives = 518/888 (58.33%), Query Frame = 0


Query: 185 MSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEKADTD--EEEWKTLEEKVH 244
           M+      DKF    SFGLW+++M ++L Q  L   L G EK  TD  E +W+ L+EK  
Sbjct: 1   MTITKFNIDKFDDNMSFGLWRVRMLAVLTQNDLKPALKGKEKKPTDMSEADWEQLDEKAL 60

Query: 245 STIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQY-------------- 304
           + I LC+ D V+ EV    TAA LW +LE+L M KSLT +L LK+               
Sbjct: 61  TAIQLCVTDTVLKEVLTETTAAGLWLRLETLYMKKSLTNRLTLKERLYTLRMAEGTSIKD 120

Query: 305 --------------------DEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALL 364
                               DED AL+LL SL   Y+NF +  + G++ ++ E VKT+LL
Sbjct: 121 HLSEFNSIIVDLTNIDVKLDDEDQALLLLCSLPQSYKNFREIILYGRETITIENVKTSLL 180

Query: 365 TRE-VRHKVAGSVAENQA-----------------SGLVASSSKGHRKS-------ENGH 424
           ++  V  ++ G+   N +                 SG   S SK   K+       + GH
Sbjct: 181 SKNLVDTQLVGTSGSNSSHGDALVTRGRSKEKKSGSGKQKSRSKSRHKNLICNYCKKQGH 240

Query: 425 LKYDCKKKSNRYKKKEG-SAAVAEPNTDSDDDLALGVNEEPCLK--DLWVLDSWVSYHMC 484
           +K DC +  N+ ++ +  +   A+ +    D   L V  +   K  D W+LDS  SYHMC
Sbjct: 241 IKVDCYRLKNKLQRNDSKNQKYADASIAEADGNVLSVVSDDKTKGCDEWILDSGCSYHMC 300

Query: 485 PNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLIS 544
             REWF+TY  VD G V MAN++VCK VG G+V ++ HDG   TL +VR+VP + ++LIS
Sbjct: 301 SYREWFTTYDVVDSGVVMMANDSVCKAVGKGTVHLKMHDGVVRTLTDVRYVPDLKRNLIS 360

Query: 545 LSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDYT 604
           L  LDS G  +  EGGV  + +G  +V+KG K GTLY L GST+T  A VASS++ +  T
Sbjct: 361 LGTLDSIGCRYSAEGGVMKISRGALIVMKGKKIGTLYVLDGSTVTGSAVVASSSMTESDT 420

Query: 605 TKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR-------------- 664
           TKL HMRLGHM+ERG+ +LSKR LLCG     ++F     F + +R              
Sbjct: 421 TKLWHMRLGHMSERGLNLLSKRGLLCGQSTGKMDFVNIVFFLEKQRVAFKDSAFIGRKGT 480

Query: 665 -------------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQT 724
                                          R  WV+ +K KS+ F NFKQWK ++E QT
Sbjct: 481 LDYIHSDLWGPAQVVSKGGSRYLLTFIDDFSRKVWVYFLKSKSDVFTNFKQWKCMIEKQT 540

Query: 725 GKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCML 784
           G++IKRLR DNGLEFC  EFN+FCK++GI RH TVR  PQQNG+AERMN+TL ERARCML
Sbjct: 541 GRQIKRLRTDNGLEFCSGEFNKFCKDKGIGRHHTVRHTPQQNGIAERMNRTLLERARCML 600

Query: 785 SNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVN 844
           SN GL + FWAEA   ACYL+NR P T I+CKTP EVWSG PADYS LKVFGC  Y HVN
Sbjct: 601 SNAGLGKDFWAEATGMACYLVNRSPSTAIECKTPEEVWSGTPADYSDLKVFGCIAYMHVN 660

Query: 845 EGKLEPRAKNGIFVG----FGDGVKEE-------------SSDVDK-QVELQLSSGTRTD 904
           EGKLEPRAK  IF+G       G +EE             SS V K QV  Q  +   T 
Sbjct: 661 EGKLEPRAKKCIFLGKKSTISLGTREEPKSSKKVVCEVGVSSKVSKGQVCSQEVAQDTTK 720

Query: 905 EPESSSSE---TARQPSIALDRARRVDIRPPQRYDFEDMIAYALQVAEEVDPHEPSTYRE 943
           E +  SSE        SIA DR RR  I+ P+RY   D++AYAL VAE +D  EPSTY+E
Sbjct: 721 EEDGGSSEPIVETENYSIARDRPRR-KIQKPKRYSDADLVAYALSVAETIDESEPSTYKE 780

[Close]

BLAST of Lag0015502 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.7e-118
Identity = 302/937 (32.23%), Postives = 457/937 (48.77%), Query Frame = 0


Query: 185 MSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLS-GMEKADT-DEEEWKTLEEKVH 244
           MS +  +  KF G N F  WQ +MR LL QQGL   L    +K DT   E+W  L+E+  
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 245 STIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQY-------------- 304
           S I L L+DDV+  + + DTA  +W++LESL M+K+LT KL LK+               
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 120

Query: 305 --------------------DEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALL 364
                               +ED A++LL SL   Y+N   + + GK  +  ++V +ALL
Sbjct: 121 HLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALL 180

Query: 365 TREVRHKVAGSVAENQASGLVA----------------SSSKGHRKSEN----------- 424
             E   K      ENQ   L+                 S ++G  K+ +           
Sbjct: 181 LNEKMRK----KPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCN 240

Query: 425 --GHLKYDC------KKKSNRYKKKEGSAAVAEPNTDSDDDLALGVN-EEPCL-----KD 484
             GH K DC      K +++  K  + +AA+ + N    D++ L +N EE C+     + 
Sbjct: 241 QPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNN----DNVVLFINEEEECMHLSGPES 300

Query: 485 LWVLDSWVSYHMCPNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDE 544
            WV+D+  S+H  P R+ F  Y   D G V M N +  K+ GIG + I+T+ G    L +
Sbjct: 301 EWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKD 360

Query: 545 VRHVPLMTKSLISLSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSF 604
           VRHVP +  +LIS   LD  G+          + KG  V+ KGV RGTLY     T    
Sbjct: 361 VRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLY----RTNAEI 420

Query: 605 AAVASSTVHKDYTTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR- 664
                +    + +  L H R+GHM+E+G+QIL+K+ L+   K   ++ C++C+FGK  R 
Sbjct: 421 CQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRV 480

Query: 665 -------------------------------------------RMTWVFMMKLKSEAFKN 724
                                                      R  WV+++K K + F+ 
Sbjct: 481 SFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQV 540

Query: 725 FKQWKTLVENQTGKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERM 784
           F+++  LVE +TG+K+KRLR DNG E+   EF E+C + GI   +TV   PQ NGVAERM
Sbjct: 541 FQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERM 600

Query: 785 NQTLFERARCMLSNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLL 844
           N+T+ E+ R ML    LP+ FW EAV TACYLINR P   +  + P  VW+ K   YS L
Sbjct: 601 NRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHL 660

Query: 845 KVFGCSVYYHV---NEGKLEPRAKNGIFVGFG---------DGVKEE------------- 904
           KVFGC  + HV      KL+ ++   IF+G+G         D VK++             
Sbjct: 661 KVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE 720

Query: 905 ---SSDVDKQVELQL-----------SSGTRTDEPESSSSETARQPSIALDRARRVD--- 943
              ++D+ ++V+  +           ++ T  +      SE   QP   +++  ++D   
Sbjct: 721 VRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGV 780

[Close]

BLAST of Lag0015502 vs. ExPASy Swiss-Prot
Match: Q8L785 (Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3702 GN=EDD1 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-57
Identity = 106/169 (62.72%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 13  VSGKTEYLYARIMESSRLALEIFSENLPGIVARISFPKSMRWNSQVMFSRPIRWIFALHG 72
           VSGKTEY++AR+ E +RLALE+ SE+LPGI+A+ISFPKSMRWNS VMFSRPIRW+ ALHG
Sbjct: 489 VSGKTEYVHARVTEPARLALEVLSEDLPGILAKISFPKSMRWNSSVMFSRPIRWVMALHG 548

Query: 73  DVVVPFSYAGVLSGNITYGLRNTSTAMVKIHSAESFMGAMKDAKINLEVEERKRKILDQS 132
           D+VVPFS+AG+ SGN++ GLRNT++A + + +AES+   M+++ IN+E+EERK+ IL++S
Sbjct: 549 DLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKS 608

Query: 133 SILAQSVEGQIVIQEVLLDEVVNLVESPVSILGKFDDSFLELPEDLLTM 182
           + LA+SV G++V+ + LL+EV NLVE+PV ++GKF +SFLELPE+LLT+
Sbjct: 609 NALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTI 657

[Close]

BLAST of Lag0015502 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 181.0 bits (458), Expect = 6.2e-44
Identity = 218/862 (25.29%), Postives = 332/862 (38.52%), Query Frame = 0


Query: 301  SLPYENFVDSFISGKDKLSPEEVKTALLTREVRHKVAGSVAENQAS-------------- 360
            +L  EN   +F+  K++L  +E+K      +   KV  ++  N  +              
Sbjct: 161  TLSEENLTLAFV--KNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKP 220

Query: 361  -----GLVASSSKGHRKSENGHLKYDC--KKKSNRYKKKEGSAAVAEPNTDSDDDLALGV 420
                 G      K H     GH+K DC   K+    K KE    V    +     +   V
Sbjct: 221  KKIFKGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEV 280

Query: 421  NEEPCLKDL-WVLDSWVSYHMCPNREWFSTYQQVDGGNVTMANNAVCK------VVGIGS 480
            N    + +  +VLDS  S H+  +   ++   +V    V     AV K          G 
Sbjct: 281  NNTSVMDNCGFVLDSGASDHLINDESLYTDSVEV----VPPLKIAVAKQGEFIYATKRGI 340

Query: 481  VRIRT-HDGFFCTLDEVRHVPLMTKSLISLSVLDSKGFSFR-GEGGVTYVCKGFKVVLKG 540
            VR+R  H+    TL++V        +L+S+  L   G S    + GVT    G  VV   
Sbjct: 341  VRLRNDHE---ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNS 400

Query: 541  VKRGTLYYLAGSTLTSFAAVASSTVHKDYTTKLRHMRLGHMNERGMQILSKRDL-----L 600
                    L    + +F A + +  HK+   +L H R GH+++  +  + ++++     L
Sbjct: 401  ------GMLNNVPVINFQAYSINAKHKN-NFRLWHERFGHISDGKLLEIKRKNMFSDQSL 460

Query: 601  CGHKVQDLEFCEHCVFGKLRR-------------RMTWV--------------------- 660
              +     E CE C+ GK  R             R  +V                     
Sbjct: 461  LNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFV 520

Query: 661  ------------FMMKLKSEAFKNFKQWKTLVENQTGKKIKRLRIDNGLEFCGSEFNEFC 720
                        +++K KS+ F  F+ +    E     K+  L IDNG E+  +E  +FC
Sbjct: 521  IFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFC 580

Query: 721  KNEGIARHRTVRDMPQQNGVAERMNQTLFERARCMLSNVGLPRRFWAEAVSTACYLINRG 780
              +GI+ H TV   PQ NGV+ERM +T+ E+AR M+S   L + FW EAV TA YLINR 
Sbjct: 581  VKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRI 640

Query: 781  PHTGI--DCKTPYEVWSGKPADYSLLKVFGCSVYYHV--NEGKLEPRAKNGIFVGF---- 840
            P   +    KTPYE+W  K      L+VFG +VY H+   +GK + ++   IFVG+    
Sbjct: 641  PSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNG 700

Query: 841  ---GDGVKE--------------------------------------------------- 900
                D V E                                                   
Sbjct: 701  FKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 760

Query: 901  --ESSDVDK-----------------------QVE------------------------L 943
              ES + D                        Q E                        L
Sbjct: 761  PNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFL 820

[Close]

BLAST of Lag0015502 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.6e-31
Identity = 179/815 (21.96%), Postives = 290/815 (35.58%), Query Frame = 0


Query: 359  SENGHLKYDCKKKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYH 418
            S  GH    C  + ++++          P T       L VN  P   + W+LDS  ++H
Sbjct: 262  SVQGHSAKRC-PQLHQFQSTTNQQQSTSPFTPWQPRANLAVN-SPYNANNWLLDSGATHH 321

Query: 419  MCPNREWFSTYQQVDGG-NVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKS 478
            +  +    S +Q   GG +V +A+ +   +   GS  + T       L++V +VP + K+
Sbjct: 322  ITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSL-DLNKVLYVPNIHKN 381

Query: 479  LISLSVLDSKGFSFRGEGGVTYVCKGFKV--------VLKGVKRGTLY---YLAGSTLTS 538
            LIS+  L +          V +    F+V        +L+G  +  LY     +   ++ 
Sbjct: 382  LISVYRLCN-----TNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 441

Query: 539  FAAVASSTVHKDYTTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR 598
            FA+  S   H  + ++L H  L  +N     ++S   L   +    L  C  C   K  +
Sbjct: 442  FASPCSKATHSSWHSRLGHPSLAILN----SVISNHSLPVLNPSHKLLSCSDCFINKSHK 501

Query: 599  -------------------------------------------RMTWVFMMKLKSEAFKN 658
                                                       R TW++ +K KS+    
Sbjct: 502  VPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDT 561

Query: 659  FKQWKTLVENQTGKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERM 718
            F  +K+LVEN+   +I  L  DNG EF      ++    GI+   +    P+ NG++ER 
Sbjct: 562  FIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERK 621

Query: 719  NQTLFERARCMLSNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLL 778
            ++ + E    +LS+  +P+ +W  A S A YLINR P   +  ++P++   G+P +Y  L
Sbjct: 622  HRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKL 681

Query: 779  KVFGCSVYYHV---NEGKLEPRAKNGIFVG------------------------------ 838
            KVFGC+ Y  +   N  KLE ++K   F+G                              
Sbjct: 682  KVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERC 741

Query: 839  -------FGDGVKEES--------------------------------------SDVDKQ 898
                   FG    +E                                       S     
Sbjct: 742  FPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPL 801

Query: 899  VELQLSS----------------------------------------------------- 943
               Q+SS                                                     
Sbjct: 802  CTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSP 861

[Close]

BLAST of Lag0015502 vs. ExPASy Swiss-Prot
Match: A4J7C9 (Glycine--tRNA ligase beta subunit OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=glyS PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-26
Identity = 66/171 (38.60%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 15  GKTEYLYARIMESSRLALEIFSENLPGIVARISFPKSMRWNS-QVMFSRPIRWIFALHGD 74
           G+ EYLYA   E  R   ++ +E  PG++A + FPK MRW   ++ F+RPIRW+ AL G+
Sbjct: 110 GQVEYLYALKREEGRPTAQVLAEICPGLIAGLHFPKPMRWGELELRFARPIRWLLALFGE 169

Query: 75  VVVPFSYAGVLSGNITYGLRNTSTAMVKIHSAESFMGAMKDAKINLEVEERKRKILDQSS 134
            VVPF  A + S   TYG R  ST  + I + E +   ++ A + ++  ERK  I  Q  
Sbjct: 170 AVVPFELANLQSNRFTYGHRFLSTGDLSIANPEDYFTKIRGAYVLIDPAERKELIWQQVQ 229

Query: 135 ILAQSVEGQIVIQEVLLDEVVNLVESPVSILGKFDDSFLELPEDLLTMRTR 185
            LA +  G +   E LLDE+ N++E P ++ G FD+ +L+LP  +L    R
Sbjct: 230 ELATAEGGVVEKDEDLLDEITNILEWPTALCGTFDEDYLKLPGAVLVTPMR 280

[Close]

BLAST of Lag0015502 vs. ExPASy TrEMBL
Match: B1N668 (Copia LTR rider OS=Solanum lycopersicum OX=4081 GN=LYC_68t000004 PE=4 SV=1)

HSP 1 Score: 991.5 bits (2562), Expect = 2.4e-285
Identity = 540/907 (59.54%), Postives = 621/907 (68.47%), Query Frame = 0


Query: 185 MSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEKADTDEEEWKTLEEKVHST 244
           MSA+NVK DKF GRNSF LWQIKMR+LLKQQG  APLS  +K      E   LEEK HST
Sbjct: 1   MSALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLS-KDKNAVVTPEMAILEEKAHST 60

Query: 245 IMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQ----------------- 304
           IMLCLADDVI EV++ +TAA LW KLESL MTKSLT KLLLKQ                 
Sbjct: 61  IMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHL 120

Query: 305 -----------------YDEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALLTR 364
                             DEDAALILLVSL + +ENFV SFI GKD +S EEV++AL +R
Sbjct: 121 EQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSR 180

Query: 365 EVRHKVAGSVAENQASGLVASSSKGHRK---------------------SENGHLKYDCK 424
           E+RHK  G+  + Q SGL  SS KG +                       E GH K+DC 
Sbjct: 181 ELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCP 240

Query: 425 KKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHMCPNREWFSTY 484
           KK  + +K+  SAAVAE +T+S++D+AL  +E     D+WVLDS  SYH+CP REWF+TY
Sbjct: 241 KKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRREWFTTY 300

Query: 485 QQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLISLSVLDSKGF 544
           +QVDGG+++MAN++VCKVVG GS++IRTHDG FCTL+EVRHVPLMTK+LISLS+LDSKGF
Sbjct: 301 EQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGF 360

Query: 545 SFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDYTTKLRHMRLG 604
           S+ G+ GV  V KG  ++LKGV RGTLY+L GST+T  A VASS  H+   TKL H+RLG
Sbjct: 361 SWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLG 420

Query: 605 HMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR----------------------- 664
           HM ERGMQILSK DLL GHKV+ LEFCEHCVFGKL R                       
Sbjct: 421 HMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWG 480

Query: 665 ---------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQTGKKIKRLRID 724
                                RMTWV+MMK KSEAF+ FK+WK L+ENQTGKKIKRLR D
Sbjct: 481 PCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTD 540

Query: 725 NGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCMLSNVGLPRRFW 784
           NGLEFC SEF++FCK+EGIARHRTVR+ PQQNGVAERMNQTL ERARCMLSN GL RRFW
Sbjct: 541 NGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFW 600

Query: 785 AEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVNEGKLEPRAKN 844
           AEAVSTACYLINRGPHTGI CKTP E+WSGK ADYS LK FGC+ YYHV+EGKLEPRAK 
Sbjct: 601 AEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKK 660

Query: 845 GIFVGFGDGVK-----------------------------------EESSDVDKQVELQL 904
           G+FVG+GDGVK                                    E+  +DKQVE Q+
Sbjct: 661 GVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEFQV 720

Query: 905 SSG---------------TRTDEPESSSSETARQPSIALDRARRVDIRPPQRYDFEDMIA 943
                             T TD PES  S+     SIA DR RRV +RPP RY FEDM+ 
Sbjct: 721 IQNESDLKEPEEEDQEPQTETDIPESMPSDI--HQSIAQDRPRRVGVRPPTRYGFEDMVG 780

[Close]

BLAST of Lag0015502 vs. ExPASy TrEMBL
Match: A0A2P5YYC3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 3.6e-204
Identity = 430/921 (46.69%), Postives = 546/921 (59.28%), Query Frame = 0


Query: 181  MRTRMSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEK--ADTDEEEWKTLE 240
            M T +S+     +KF G+NSF LW+IKMR++L QQGL   LSG +K  +   EE+   + 
Sbjct: 500  MATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDML 559

Query: 241  EKVHSTIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQY---------- 300
            E+ HS I+LCL D+V+ EVA+  TA+ LW +LES  MTKSLT +L LKQ           
Sbjct: 560  ERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGT 619

Query: 301  ------------------------DEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVK 360
                                    DED A+I+L SL   YENFVD+ + G+D L+ EEVK
Sbjct: 620  PVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVK 679

Query: 361  TALLTREVRHKVAGSVAE-NQASGLVA---------SSSKGHRKSEN------------G 420
             AL + E+R K+ G V E N+  GLVA         SSSK H +S++            G
Sbjct: 680  NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYG 739

Query: 421  HLKYDC---KKKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHM 480
            H+K DC   K+KS   +++   A VA+ ++ SD ++ L V++       W+LD+  ++H+
Sbjct: 740  HMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDS-YAGGRWILDTGATFHI 799

Query: 481  CPNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLI 540
              +++ FSTY++   G+V M N+  C+V+GIG+VRI+  DG   TL +VRH+P M K+LI
Sbjct: 800  STSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLI 859

Query: 541  SLSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDY 600
            SLS LD KGF +  EGGV  V  G   V++G     LY+L GS++T  A V+SS      
Sbjct: 860  SLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSD 919

Query: 601  TTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR------------- 660
            TTKL HMRLGHM+ERG+ +LSKR LL G     L FCEHCVFGK  R             
Sbjct: 920  TTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGT 979

Query: 661  -------------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQT 720
                                           R  WV+ +K K E   NFKQ+K L+ENQT
Sbjct: 980  VDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQT 1039

Query: 721  GKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCML 780
            GKKIKR R DNGLEFC  EFNEFCKNEGI RHRTVR  PQQNGVAERMN+TL ERARCM 
Sbjct: 1040 GKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMR 1099

Query: 781  SNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVN 840
            SN GL   FWAEAV+TACYL+NR P T I+ KTP EVWSG PADYS L+VFGC  Y HVN
Sbjct: 1100 SNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVN 1159

Query: 841  EGKLEPRAKNGIFVGFGDGVK------------------------------------EES 900
            EGKL+PRAK  IF+G+G GVK                                    +E 
Sbjct: 1160 EGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEE 1219

Query: 901  SD------VDKQVELQL-------SSGTRTDEPESSSSETARQP-----SIALDRARRVD 943
            SD      V+KQVE Q+        +  + D+ E   S+    P     SIA  R +R  
Sbjct: 1220 SDRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKR-Q 1279

[Close]

BLAST of Lag0015502 vs. ExPASy TrEMBL
Match: A0A2P5W031 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36262 PE=3 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 3.6e-204
Identity = 430/921 (46.69%), Postives = 546/921 (59.28%), Query Frame = 0


Query: 181  MRTRMSAMNVKTDKFIGRNSFGLWQIKMRSLLKQQGLCAPLSGMEK--ADTDEEEWKTLE 240
            M T +S+     +KF G+NSF LW+IKMR++L QQGL   LSG +K  +   EE+   + 
Sbjct: 521  MATSVSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDML 580

Query: 241  EKVHSTIMLCLADDVIIEVANVDTAASLWSKLESLCMTKSLTKKLLLKQY---------- 300
            E+ HS I+LCL D+V+ EVA+  TA+ LW +LES  MTKSLT +L LKQ           
Sbjct: 581  ERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGT 640

Query: 301  ------------------------DEDAALILLVSLSLPYENFVDSFISGKDKLSPEEVK 360
                                    DED A+I+L SL   YENFVD+ + G+D L+ EEVK
Sbjct: 641  PVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVK 700

Query: 361  TALLTREVRHKVAGSVAE-NQASGLVA---------SSSKGHRKSEN------------G 420
             AL + E+R K+ G V E N+  GLVA         SSSK H +S++            G
Sbjct: 701  NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYG 760

Query: 421  HLKYDC---KKKSNRYKKKEGSAAVAEPNTDSDDDLALGVNEEPCLKDLWVLDSWVSYHM 480
            H+K DC   K+KS   +++   A VA+ ++ SD ++ L V++       W+LD+  ++H+
Sbjct: 761  HMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDS-YAGGRWILDTGATFHI 820

Query: 481  CPNREWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLI 540
              +++ FSTY++   G+V M N+  C+V+GIG+VRI+  DG   TL +VRH+P M K+LI
Sbjct: 821  STSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLI 880

Query: 541  SLSVLDSKGFSFRGEGGVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDY 600
            SLS LD KGF +  EGGV  V  G   V++G     LY+L GS++T  A V+SS      
Sbjct: 881  SLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSD 940

Query: 601  TTKLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR------------- 660
            TTKL HMRLGHM+ERG+ +LSKR LL G     L FCEHCVFGK  R             
Sbjct: 941  TTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGT 1000

Query: 661  -------------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQT 720
                                           R  WV+ +K K E   NFKQ+K L+ENQT
Sbjct: 1001 VDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQT 1060

Query: 721  GKKIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCML 780
            GKKIKR R DNGLEFC  EFNEFCKNEGI RHRTVR  PQQNGVAERMN+TL ERARCM 
Sbjct: 1061 GKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMR 1120

Query: 781  SNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVN 840
            SN GL   FWAEAV+TACYL+NR P T I+ KTP EVWSG PADYS L+VFGC  Y HVN
Sbjct: 1121 SNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVN 1180

Query: 841  EGKLEPRAKNGIFVGFGDGVK------------------------------------EES 900
            EGKL+PRAK  IF+G+G GVK                                    +E 
Sbjct: 1181 EGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEE 1240

Query: 901  SD------VDKQVELQL-------SSGTRTDEPESSSSETARQP-----SIALDRARRVD 943
            SD      V+KQVE Q+        +  + D+ E   S+    P     SIA  R +R  
Sbjct: 1241 SDRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKR-Q 1300

[Close]

BLAST of Lag0015502 vs. ExPASy TrEMBL
Match: Q2RAC8 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g05840 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 4.3e-173
Identity = 382/917 (41.66%), Postives = 510/917 (55.62%), Query Frame = 0


Query: 201  FGLWQIKMRSLLKQQGLCAPLSGMEKADTD-EEEWKTLEEKVHSTIMLCLADDVIIEVAN 260
            F LWQ+KMR++L QQ L   LSG +K   D   + K  + K  S I L L+++++ EV  
Sbjct: 224  FSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKRDRKAMSYIHLHLSNNILQEVLK 283

Query: 261  VDTAASLWSKLESLCMTKSLTKKLLLKQ-------------------------------- 320
             + AA LW KLE +CMTK LT K+ LKQ                                
Sbjct: 284  EEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSAFKEIIADLESMEV 343

Query: 321  -YD-EDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALLTREVRHKVAGSVAEN-Q 380
             YD ED  LILL SL   Y NF D+ +  +D L+ +EV  AL  +E   K+  S   N Q
Sbjct: 344  KYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQ 403

Query: 381  ASGLVA------------------------SSSKGHRKS-----ENGHLKYDC------K 440
            A GL+                         S S+G  KS      +GH  ++C       
Sbjct: 404  AEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKD 463

Query: 441  KKSNRY-----KKKEGSAAVAEPNTDSDDDLALGVNEEPCLK--DLWVLDSWVSYHMCPN 500
            K++ +Y     K++EG AAV    TD   D  L V    C +  D W+L++   YHMCPN
Sbjct: 464  KRTGKYVPKGKKEEEGKAAVV---TDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPN 523

Query: 501  REWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLISLS 560
            R+WF+TY+ V  G V M ++  C+V GIG+V+I+  DG   TL +VRH+P + +SLISL 
Sbjct: 524  RDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLC 583

Query: 561  VLDSKGFSFRGEGGVTYVCKGFKVVLKG-VKRGTLYYLAGSTLTSFAAVASSTVHKDYTT 620
             LD KG+ + G  G+  V KG  VV+K  +K   LY+L G+T+    A  S ++     T
Sbjct: 584  TLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDAT 643

Query: 621  KLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR--------------- 680
             L HMRLGHM E G+  LSKR LL G  +  L+FCEHC+FGK +R               
Sbjct: 644  NLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILD 703

Query: 681  -----------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQTGK 740
                                         R  W + +K K +AF  FK+WKT+VE QT +
Sbjct: 704  YVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 763

Query: 741  KIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCMLSN 800
            K+K LR DNG+EFC   F  +CK+EGI RH TV   PQQNGVAERMN+T+  +ARC+LSN
Sbjct: 764  KVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSN 823

Query: 801  VGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVNEG 860
             GLP++FWAEAVSTACYLINR P   ID KTP EVWSG PA+YS L+VFGC+ Y HV+ G
Sbjct: 824  AGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 883

Query: 861  KLEPRAKNGIFVGFGDGVK------------------------------------EESSD 920
            KLEPRA   IF+G+  GVK                                    E    
Sbjct: 884  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 943

Query: 921  VDKQVELQLSSG---------TRTDEP---ESSSSETARQP--SIALDRARRVDIRPPQR 943
               QVE  +SSG            DEP   +S+SS   + P  SIA DR +R +I+PPQR
Sbjct: 944  ASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKR-NIKPPQR 1003

[Close]

BLAST of Lag0015502 vs. ExPASy TrEMBL
Match: Q53ND1 (Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g05840 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 4.3e-173
Identity = 382/917 (41.66%), Postives = 510/917 (55.62%), Query Frame = 0


Query: 201  FGLWQIKMRSLLKQQGLCAPLSGMEKADTD-EEEWKTLEEKVHSTIMLCLADDVIIEVAN 260
            F LWQ+KMR++L QQ L   LSG +K   D   + K  + K  S I L L+++++ EV  
Sbjct: 224  FSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKRDRKAMSYIHLHLSNNILQEVLK 283

Query: 261  VDTAASLWSKLESLCMTKSLTKKLLLKQ-------------------------------- 320
             + AA LW KLE +CMTK LT K+ LKQ                                
Sbjct: 284  EEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSAFKEIIADLESMEV 343

Query: 321  -YD-EDAALILLVSLSLPYENFVDSFISGKDKLSPEEVKTALLTREVRHKVAGSVAEN-Q 380
             YD ED  LILL SL   Y NF D+ +  +D L+ +EV  AL  +E   K+  S   N Q
Sbjct: 344  KYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQ 403

Query: 381  ASGLVA------------------------SSSKGHRKS-----ENGHLKYDC------K 440
            A GL+                         S S+G  KS      +GH  ++C       
Sbjct: 404  AEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKD 463

Query: 441  KKSNRY-----KKKEGSAAVAEPNTDSDDDLALGVNEEPCLK--DLWVLDSWVSYHMCPN 500
            K++ +Y     K++EG AAV    TD   D  L V    C +  D W+L++   YHMCPN
Sbjct: 464  KRTGKYVPKGKKEEEGKAAVV---TDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPN 523

Query: 501  REWFSTYQQVDGGNVTMANNAVCKVVGIGSVRIRTHDGFFCTLDEVRHVPLMTKSLISLS 560
            R+WF+TY+ V  G V M ++  C+V GIG+V+I+  DG   TL +VRH+P + +SLISL 
Sbjct: 524  RDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLC 583

Query: 561  VLDSKGFSFRGEGGVTYVCKGFKVVLKG-VKRGTLYYLAGSTLTSFAAVASSTVHKDYTT 620
             LD KG+ + G  G+  V KG  VV+K  +K   LY+L G+T+    A  S ++     T
Sbjct: 584  TLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDAT 643

Query: 621  KLRHMRLGHMNERGMQILSKRDLLCGHKVQDLEFCEHCVFGKLRR--------------- 680
             L HMRLGHM E G+  LSKR LL G  +  L+FCEHC+FGK +R               
Sbjct: 644  NLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILD 703

Query: 681  -----------------------------RMTWVFMMKLKSEAFKNFKQWKTLVENQTGK 740
                                         R  W + +K K +AF  FK+WKT+VE QT +
Sbjct: 704  YVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 763

Query: 741  KIKRLRIDNGLEFCGSEFNEFCKNEGIARHRTVRDMPQQNGVAERMNQTLFERARCMLSN 800
            K+K LR DNG+EFC   F  +CK+EGI RH TV   PQQNGVAERMN+T+  +ARC+LSN
Sbjct: 764  KVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSN 823

Query: 801  VGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSLLKVFGCSVYYHVNEG 860
             GLP++FWAEAVSTACYLINR P   ID KTP EVWSG PA+YS L+VFGC+ Y HV+ G
Sbjct: 824  AGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 883

Query: 861  KLEPRAKNGIFVGFGDGVK------------------------------------EESSD 920
            KLEPRA   IF+G+  GVK                                    E    
Sbjct: 884  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 943

Query: 921  VDKQVELQLSSG---------TRTDEP---ESSSSETARQP--SIALDRARRVDIRPPQR 943
               QVE  +SSG            DEP   +S+SS   + P  SIA DR +R +I+PPQR
Sbjct: 944  ASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKR-NIKPPQR 1003

[Close]

BLAST of Lag0015502 vs. TAIR 10
Match: AT3G48110.1 (glycine-tRNA ligases )

HSP 1 Score: 224.9 bits (572), Expect = 2.7e-58
Identity = 106/169 (62.72%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 13  VSGKTEYLYARIMESSRLALEIFSENLPGIVARISFPKSMRWNSQVMFSRPIRWIFALHG 72
           VSGKTEY++AR+ E +RLALE+ SE+LPGI+A+ISFPKSMRWNS VMFSRPIRW+ ALHG
Sbjct: 489 VSGKTEYVHARVTEPARLALEVLSEDLPGILAKISFPKSMRWNSSVMFSRPIRWVMALHG 548

Query: 73  DVVVPFSYAGVLSGNITYGLRNTSTAMVKIHSAESFMGAMKDAKINLEVEERKRKILDQS 132
           D+VVPFS+AG+ SGN++ GLRNT++A + + +AES+   M+++ IN+E+EERK+ IL++S
Sbjct: 549 DLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKS 608

Query: 133 SILAQSVEGQIVIQEVLLDEVVNLVESPVSILGKFDDSFLELPEDLLTM 182
           + LA+SV G++V+ + LL+EV NLVE+PV ++GKF +SFLELPE+LLT+
Sbjct: 609 NALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTI 657

[Close]

BLAST of Lag0015502 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 95.9 bits (237), Expect = 1.9e-19
Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 758 ESSDVDKQVELQLSSGTRTDEPESS---SSETARQPSIALDRARRVDIRPPQRYDFEDMI 817
           ++S     +++  S+  + D PE S   S    R+P+   D      +     +D    +
Sbjct: 6   DASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCH-SVASLTIHDISQFL 65

Query: 818 AYALQVAEEVDP------------HEPSTYREAVSSSESAQWLAAIGDEIESLDKHQTWE 877
           +Y     E+V P             EPSTY EA    E   W  A+ DEI +++   TWE
Sbjct: 66  SY-----EKVSPLYHSFLVCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWE 125

Query: 878 LVKRPKERKIVTCKWVFK-KNEGISPIEGIKFKARVVARGFTQREGVDYNEIFSPVVRHT 937
           +   P  +K + CKWV+K K      IE  ++KAR+VA+G+TQ+EG+D+ E FSPV + T
Sbjct: 126 ICTLPPNKKPIGCKWVYKIKYNSDGTIE--RYKARLVAKGYTQQEGIDFIETFSPVCKLT 185

Query: 938 SIRVLLAMVAHQNLELEQLDV 943
           S++++LA+ A  N  L QLD+
Sbjct: 186 SVKLILAISAIYNFTLHQLDI 195

[Close]

BLAST of Lag0015502 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 7.8e-18
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 663 MNQTLFERARCMLSNVGLPRRFWAEAVSTACYLINRGPHTGIDCKTPYEVWSGKPADYSL 722
           MN+T+ E+ R ML   GLP+ F A+A +TA ++IN+ P T I+   P EVW      YS 
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 723 LKVFGCSVYYHVNEGKLEPRAKNG 747
           L+ FGC  Y H +EGKL+PRAK G
Sbjct: 61  LRRFGCVAYIHCDEGKLKPRAKKG 84

[Close]

BLAST of Lag0015502 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12
Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 844 WLAAIGDEIESLDKHQTWELVKRPKERKIVTCKWVFK-KNEGISPIEGIKFKARVVARGF 903
           W  A+ +E+++L +++TW LV  P  + I+ CKWVFK K      ++  + KAR+VA+GF
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD--RLKARLVAKGF 99

Query: 904 TQREGVDYNEIFSPVVRHTSIRVLLAMVAHQNLELEQ 940
            Q EG+ + E +SPVVR  +IR +L +   Q LE+ Q
Sbjct: 100 HQEEGIYFVETYSPVVRTATIRTILNVA--QQLEVGQ 132

[Close]

BLAST of Lag0015502 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-12
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 496 GVTYVCKGFKVVLKGVKRGTLYYLAGSTLTSFAAVASSTVHKDYTTKLRHMRLGHMNERG 555
           GV  V KG + +LKG +  +LY L GS  T  + +A +   KD  T+L H RL HM++RG
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETA--KD-ETRLWHSRLAHMSQRG 86

Query: 556 MQILSKRDLLCGHKVQDLEFCEHCVFGKLRR 587
           M++L K+  L   KV  L+FCE C++GK  R
Sbjct: 87  MELLVKKGFLDSSKVSSLKFCEDCIYGKTHR 114

The following BLAST results are available for this feature:

BLAST of Lag0015502 vs. NCBI nr


Match Name	E-value	Identity	Description
ABO36622.1	5.0e-285	59.54	copia LTR rider [Solanum lycopersicum] >ABO36636.1 copia LTR rider [Solanum lyco...	[more]
KAG7627205.1	3.9e-229	51.52	F-box-like domain superfamily [Arabidopsis thaliana x Arabidopsis arenosa]	[more]
PPS20553.1	7.5e-204	46.69	hypothetical protein GOBAR_AA00016 [Gossypium barbadense]	[more]
PPR84446.1	7.5e-204	46.69	hypothetical protein GOBAR_AA36262 [Gossypium barbadense]	[more]
KAG9442664.1	3.6e-190	44.93	hypothetical protein H6P81_018518 [Aristolochia fimbriata]	[more]

BLAST of Lag0015502 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.7e-118	32.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q8L785	3.8e-57	62.72	Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3...	[more]
P04146	6.2e-44	25.29	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.6e-31	21.96	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
A4J7C9	2.6e-26	38.60	Glycine--tRNA ligase beta subunit OS=Desulfotomaculum reducens (strain MI-1) OX=...	[more]

BLAST of Lag0015502 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B1N668	2.4e-285	59.54	Copia LTR rider OS=Solanum lycopersicum OX=4081 GN=LYC_68t000004 PE=4 SV=1	[more]
A0A2P5YYC3	3.6e-204	46.69	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV...	[more]
A0A2P5W031	3.6e-204	46.69	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36262 PE=3 SV...	[more]
Q2RAC8	4.3e-173	41.66	Retrotransposon protein, putative, Ty1-copia sub-class OS=Oryza sativa subsp. ja...	[more]
Q53ND1	4.3e-173	41.66	Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. jap...	[more]

BLAST of Lag0015502 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48110.1	2.7e-58	62.72	glycine-tRNA ligases	[more]
AT4G23160.1	1.9e-19	33.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00710.1	7.8e-18	48.81	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00820.1	1.3e-12	41.24	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00300.1	1.7e-12	43.96	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 234..287 e-value: 1.6E-7 score: 31.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 760..790
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 765..790
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 569..726 e-value: 4.0E-28 score: 100.1
IPR015944	Glycine-tRNA ligase, beta subunit	PFAM	PF02092	tRNA_synt_2f	coord: 12..182 e-value: 8.0E-45 score: 153.8
IPR015944	Glycine-tRNA ligase, beta subunit	PANTHER	PTHR30075	GLYCYL-TRNA SYNTHETASE	coord: 12..183
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 516..583 e-value: 2.9E-13 score: 49.5
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 859..944 e-value: 7.8E-22 score: 78.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 620..717 score: 15.003563
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 587..726

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015502.1	Lag0015502.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006426	glycyl-tRNA aminoacylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004820	glycine-tRNA ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding