Lag0015500 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTTCCCAAATGTTTTCGGGAATGGGAAGAGGTGTGTAAAGTCCTGTATTTTGACCATGTCCTTTAAAACTCTGGCAAGTGTAACATCGTGCTACGAAATTGGTGACATCCCTCTTTAATTGCGGCCAAAAATATCTGGTCTCTAGGATTTGTAGTGTCTTGTCTCGTCCAAGATGTCCGGCTAAATCTCCAGCATGAGCTTCTCGAATGAGCACTTCCCTTAAGGACGAATGTGGAATGCATAAGACATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTATCTATTTTTCTTTCAGCCTCTTGGTATTACTTCTTTTCTTAAGTTTTGATTTTGAAAACATGATCTTTGAAATTCTTCTTTTCAGTTGCAATTTTCTCAAAATTTTCATTCTATATTTGCAATATTCATCAACCAAGTAATTAGTTTTGATTTCTTTATGTGCTAAAGTTATTTTTCATTCCATCAGTTTAGCTCGTCAGTGTGCACAACTGTGGTTGAAAACTCGAGAATCCCTAGGACATCCTCTTGGTGTTGTTTCTGATCCTGTTGATCTTGTATGTCCTAAAGAACTTCTGGACGCAGCCATCAAAAAGGTTAATATTCATATGCTGGTGATTTAGTTCATTATCATTATCGTTGATAACACAGCTACATATTTTCAAATTTTATCCGGGTGGGTTTTTTTTCTTTGTTTTTTTTTTATTATTATTTTTTTAAAATGTGTGAGGTTTGTTCGCATAGGTTAGGATTAGACTTGTTTTATGTTCAAGAAGCCTTTTGCTACCCTTCTAATTGCTGTATTTATCTTTATAGGTGTTTGTTTCTTTTGAACATCTGTCATATCTTTTCATTTTATCAATGAGAAGTTCATATCTTTTTTTTTTTTTAATAAAAAAACACTGATGTGGCTTGGGGAAAAGTTAATTTCCTATCTTTCCTTTCAGGATCTAAATCTAGATATTTCTATAGACGAGATTGCAACCAACCGTGTGAAACTGAACTTGTAAGATTAAATATGGATAATTCCTGATTGAAAAGTTGTTTGTTAAAAAAAAAAAGCTTTTACATAGTCATCCATTTCAATTTGGCCACTGTTATCAAACTAAGCTGCTCAATTTTCCGTCCATCATGTTTTGATTATATGTTTTACAATTTCTAATGTACTAGTTATTATTTCCTGTACATTTTACTTTTAACAAGATATCATCTCTTATATGTGACAGGTGCATGAAGATGTGAGGTGGTTTGTTCTTGAAATTGGAACTGAAGAAATACCACCGAAAGATGTTGTGGATGCAAGCCAACAAGTATGAATTAATTATTTATTATTTGGTTTCTTTTTTGAAACATGAAAAGATACAAAAGCAAGAGAGAGACAAATATCGTAGCAGATTATAGAATTCCTGTAGTCCCTGAAGATTACACAAAACCTTCCTCATAGGTAGCAATGGAAACATAAGAATAATCACACAAGAGAGGGCGAGAGTGCACCAAAAGGATTCTAACCAAATCTTCCGTAGCATTGCCTTAACCACGTTATTCCAGAGTCTTTTCTTTCTTTTCGAGGGCATTCCACTTAGAAGTTGCTGAATATTTCTTGGAGCAGAGTCAGCTAAACACCAATTGATGTTAAATTCTTTGAACAACTTATGCTAGCTGCTAGGATAGACCCTTTAATTGAAGAAGGATTGGATGGCAGTTTGTAAATAGTTTTGGCACATAATACACCTACGCAGGGAGAGATAACTCAAACATTTCATGTCTTGAATATTACTAACCTGATCCTGATGTACGTTGGTTCTATTTCTAAATCCACCTACGCAGAGAGAGATAACTCAAAGGTTTCCTGTCTTGAATATCATCAACCTGATGAAGGATGCAGACTAACTCTTCAACGAACTTCTGAATCATAAACTACTTTATTTGTTTGAACTTTAAAATAGTTAGGAAATTCCTTTACTTTCATTAAAAAATTTTAAAATAATTTTAGTGAAGCAGAGTAGAAAATAAGTTAGGCAAATTATTATAATTTCATCATTAAATATCTATTAAAAAAATCATATATATGCATATTTATTTATTTATTTATTTAAATTTTAAGATTTTGAAAATAGTTATTGAAGGTAAATGTCTTTCTAGATATTTAATTATTTTTAGTTATAACTCTATTTCCATTTTTTTTTTAAAAAAATTAATTTCATCCGGTAAAGGACCAAAATAGTTTAAAGGTAACATTCCCATTCACATCTAATTGCATGAGATAATTTTTGAAACTTTCCTGCTTATTGTAGGGGAAGTAAAATAACTTCTTTACTTATTAAATAGGGTGCGGTTTGAAAGGGTTGTTCTATTGATTATGTTTTTTGAGGCCGTGAGTTCAATCTTATCCGTTTCTTTTTGCTGTTACAGGAGGTCTAGTTGCTTCTTGTTTGTTTTGAACTTTTAGTTTTGAGATCAATTAAGATCATTGTTTTGGTTCATTTTTGCTTTGAAGTTCGTGGAAGCTCCATATTTGTTTGGGACAGTTTTGTGGTTGGTTTGGTTTCAGTTCAGGATACGTCTTGTTTCAATTCATTATATTAGAATCTTCAAACTTCATTATGAGAATTTTGGTCGGATCGTAATCAATGGATCTTCCATAGCAAGTCTCTTTCATGGCCCCTTTGGTTTGAATCAGCTCATCTAAAGACCGTTTCTTGAAGTTCTCTCTCAAAGTTTTTATTGTCTTCTCATCACAGGGCTCTCATCTGAATCATCTGAATTGAAATGCTTGCATTTATCCTTTGTTATTTATCTATTTATTTTTCGGTCCTTATGCTTTTATTGTTTCTCTTTCATTTTCACTCCCTCGTCGAGTTTGTATCCTTTGAGCAGTAGTCTCTTTTCATTTCATCAATGAAAAGTCTTAAATTTAGGAGAATAATTTTGTTTCTTATTCCAATATGTGCAACCTAGGTCTTCTTATATAGGAGAAAGACCCACTACAATATAAGGAAAAAATAAAGACAATAATGACAAAATATTGACAAATAATATATACAATTGTAAATATTAGAAATTCCAACAAAAAGTTTCGCTTCTTGTTAAAAAAAAAAAAAAAAGGTGCTGCATGGTTCTATTATTAGGACAATTTGAGAAGGGACGGTTAGAAAGTTATAAAGGAAAGGTAATATTTACTTAGGAAAGGAAAAGAAAATCTTCATCTTAAGAAGCAAACTCAAGGAGCTTTCTCGCCAGTATTACTTTTGTTTCATGAAAATGCAGTAGTGGAGAATGATTGAGAACCCAAGCCTTTAGCAGAATTTCCGACAATATTATACTAATGTCCGCAATACATATATACATCTATACCCTGAAGGACCAGAAAAATGTAGACTAAAGACGATAAACTGACACATTTATCTACTTTTTTGATGGAAAAAGTATATAGTAACTTAACATCTGGGAATGAGATACCATGCTATGTCATCATCCCTCTCGATTTTTGAAAACCCTAAACAGTTGAATAATCAGACCTACTTGGCACCATTGCTTGCAAATTGAAGAGAATTTACTCTTTAAGTCAAAGTGTCAAACCAGATGCCTATATTTTGTTATTTCTATCCACTATACCAAACCCCGTATTTTATTTCTCTTGGCATTTTCTTCATATTCATATCTTCCTTTTTGACTGGATCATATTCATACCATTAGGATTTTACAGTCTATATTTTATTATTGCTAGAGTGGTTGCACTTGAATTGCGTTATGGCTATTTCCTTTTCCTTCTTTAATAGCTTAATTCTCCAGAAAGTATTCTTATTCGTATTTTTGTCTTCAGGGAAATAACTATCATTACTATAATGTTGCTGTCAACAAGCATTATTTTATTTCTCTGCTAGTTGATATTGACTATGCTTGACTTTTTATTGCAGCTCAAAACATATATGCTGCAGTTACTTGAAAAGCATAGGCTAAGCCATGGTAATGTGCAAGCTTTTGGCACACCTCGCAGGCTAGTGGTATAGCAATTACTTCACGCCCTTTTAGTATGTTGACAAATGCTTGATGAATTTTTGTTAATATTGAGAAGGGGTTATTTTGTAGATTGCTTTTGTAACCAAAATTCATTTGGCTGGGTTAAAACTATGGTGGCCGACAGCTTGTCTAGGTGCCTAGAAATGAGAAGAGGTCTTAATCTATTTTTCCTATTAGAAGGGATCCAAAATGCTTATTGAAATACGTTCTCTTTTTCTGTGTGCTTGATTTGAACTTGATCTAACCTACCACAGGGACGAGGAAGGATTAGAATTATCTTTAAACAGCATCTAGTTGATTTCTTTAGTTGGGGAGTTTCTTTGGCTTGTGGTTAGTTTGTTGTTTTGGAGTTTTTGGTTAGTTTGCTGTTTTGGTGAGCTTTTAGTTGGGTTTTTTTTTCCTTCCTTTTTCTTTCGGTGGTTGCTGTTTTGGCCTTTCTTTTTTGGTTTACTGATTTTTTTCTCCCTTTAGAAGGTTGTTTCCCTGCAGTTTTTGTATCTTTTCATCTATTAATGAAATGTTTGAAATTATAATGGACCTCATAGTTATCCTTTCCGTTAGCAAGTAGTCCCCTGGAACTTCTAAATGCAGACCACTGCTTCTCTAGAAAAGAAAAATATCTCTAATCTAAACTCTCAAGGTACATTATGTCAATAGGAAACACTTCGAGAGTGTTGGAATTTCTGATTTTTACAATTGTGTAAATATTATTTGTCAATATTTAGTCATTATTGTCTTTATTCTTTCCTTATATTGTAGTGGGTCTTTCTCCTATATAAGAAGACCTAGGTTGCACATATTTGAATAACAAAGAATTATTCTCCTAAATTAAAGATGGTATTAGAGCAAGGTTAAACCCAAGCTGTCCCTAAAACCATAAAAACCCTAGCCACCATACTTTTTTGAAACCCTATCCGCCACTGTCGTCGGAACTCTAGCTGCCATTCTTGCTTGGTGCATCCTACTTCTGGCATCGGTGGTCTTGTTTTTCCTTGACCCAAACTTTTCCAGTAAAGTACCCAGACATTCGCGATTCACCTAGGTCAGTTCGCGCTCGTCACTGCAACTCACCTTGGCAATTCGCGATTCTCAGGTTTTTTCGTTTGCAAACAAGTGGTCCTTTGTTTGACGACATCAAAGCTGCTCGAACCTTCTGCTATTTCACAGAATCACCTTGCAAGAAGGGGCCGGTTCGGTCAACTTGAGACCCTCCCGCTATGCTCATGCCCAAAAGATGGAGATTGAGAAACTGATTGCGGAAATGCTTGAAGTTGGTATTATACGACCTAGTGTCAGCCCCTACTCGAGTCTCGTCCTCCTAATCAAGAAGAAAGACGGCAGTTGGAGGTTCTGCGTTGATTACAGGGCTCTTAATAATGTGACGGTCCCTGAAAAATTCCCGATCCCTGTGGTCGAAGAACTATTGGATGAACTTCACGGCTCAACGATTTACTCCAAAATCGACCTTAAGTCCAGTTACGACCAAATCCGGGTTCACAGAGAGGACATTACGAAAACGGCTTTCCGCATTCATGAGGGGCACTATGAATTTCCTGTGATGCGATTCGGCCTCACTAACGCTCCGACCACGTTCCAACCGTTGATGAATCGGATATTCCGACATCTCCTTTGA ATGGTCTTCCCAAATGTTTTCGGGAATGGGAAGAGTTTAGCTCGTCAGTGTGCACAACTGTGGTTGAAAACTCGAGAATCCCTAGGACATCCTCTTGGTGTTGTTTCTGATCCTGTTGATCTTGTATGTCCTAAAGAACTTCTGGACGCAGCCATCAAAAAGGTGCATGAAGATGTGAGGTGGTTTGTTCTTGAAATTGGAACTGAAGAAATACCACCGAAAGATGTTGTGGATGCAAGCCAACAACTCAAAACATATATGCTGCAGTTACTTGAAAAGCATAGGCTAAGCCATGGTAATGTGCAAGCTTTTGGCACACCTCGCAGGCTAGTGACCACTGCTTCTCTAGAAAAGAAAAATATCTCTAATCTAAACTCTCAAGTAAAGTACCCAGACATTCGCGATTCACCTAGGTCAGTTCGCGCTCGTCACTGCAACTCACCTTGGCAATTCGCGATTCTCAGAATCACCTTGCAAGAAGGGGCCGGTTCGGTCAACTTGAGACCCTCCCGCTATGCTCATGCCCAAAAGATGGAGATTGAGAAACTGATTGCGGAAATGCTTGAAGTTGGTATTATACGACCTAGTGTCAGCCCCTACTCGAGTCTCGTCCTCCTAATCAAGAAGAAAGACGGCAGTTGGAGGTTCTGCGTTGATTACAGGGCTCTTAATAATGTGACGGTCCCTGAAAAATTCCCGATCCCTGTGGTCGAAGAACTATTGGATGAACTTCACGGCTCAACGATTTACTCCAAAATCGACCTTAAGTCCAGTTACGACCAAATCCGGGTTCACAGAGAGGACATTACGAAAACGGCTTTCCGCATTCATGAGGGGCACTATGAATTTCCTGTGATGCGATTCGGCCTCACTAACGCTCCGACCACGTTCCAACCGTTGATGAATCGGATATTCCGACATCTCCTTTGA ATGGTCTTCCCAAATGTTTTCGGGAATGGGAAGAGTTTAGCTCGTCAGTGTGCACAACTGTGGTTGAAAACTCGAGAATCCCTAGGACATCCTCTTGGTGTTGTTTCTGATCCTGTTGATCTTGTATGTCCTAAAGAACTTCTGGACGCAGCCATCAAAAAGGTGCATGAAGATGTGAGGTGGTTTGTTCTTGAAATTGGAACTGAAGAAATACCACCGAAAGATGTTGTGGATGCAAGCCAACAACTCAAAACATATATGCTGCAGTTACTTGAAAAGCATAGGCTAAGCCATGGTAATGTGCAAGCTTTTGGCACACCTCGCAGGCTAGTGACCACTGCTTCTCTAGAAAAGAAAAATATCTCTAATCTAAACTCTCAAGTAAAGTACCCAGACATTCGCGATTCACCTAGGTCAGTTCGCGCTCGTCACTGCAACTCACCTTGGCAATTCGCGATTCTCAGAATCACCTTGCAAGAAGGGGCCGGTTCGGTCAACTTGAGACCCTCCCGCTATGCTCATGCCCAAAAGATGGAGATTGAGAAACTGATTGCGGAAATGCTTGAAGTTGGTATTATACGACCTAGTGTCAGCCCCTACTCGAGTCTCGTCCTCCTAATCAAGAAGAAAGACGGCAGTTGGAGGTTCTGCGTTGATTACAGGGCTCTTAATAATGTGACGGTCCCTGAAAAATTCCCGATCCCTGTGGTCGAAGAACTATTGGATGAACTTCACGGCTCAACGATTTACTCCAAAATCGACCTTAAGTCCAGTTACGACCAAATCCGGGTTCACAGAGAGGACATTACGAAAACGGCTTTCCGCATTCATGAGGGGCACTATGAATTTCCTGTGATGCGATTCGGCCTCACTAACGCTCCGACCACGTTCCAACCGTTGATGAATCGGATATTCCGACATCTCCTTTGA MVFPNVFGNGKSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAIKKVHEDVRWFVLEIGTEEIPPKDVVDASQQLKTYMLQLLEKHRLSHGNVQAFGTPRRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHLL Homology
BLAST of Lag0015500 vs. NCBI nr
Match: TYK21209.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 239.6 bits (610), Expect = 3.6e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. NCBI nr
Match: TYK10423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 239.6 bits (610), Expect = 3.6e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. NCBI nr
Match: TYK23724.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 239.6 bits (610), Expect = 3.6e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. NCBI nr
Match: TYK26407.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 239.6 bits (610), Expect = 3.6e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. NCBI nr
Match: KAA0041253.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 239.2 bits (609), Expect = 4.8e-59 Identity = 122/209 (58.37%), Postives = 152/209 (72.73%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy Swiss-Prot
Match: Q8L785 (Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3702 GN=EDD1 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33 Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 130.2 bits (326), Expect = 4.1e-29 Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 4.1e-29 Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26 Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.5e-26 Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy TrEMBL
Match: A0A5D3CEX8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00690 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy TrEMBL
Match: A0A5D3DRT3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00710 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy TrEMBL
Match: A0A5D3DD68 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00150 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy TrEMBL
Match: A0A5D3DJA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00370 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Lag0015500 vs. ExPASy TrEMBL
Match: A0A5A7TDM4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002330 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 2.3e-59 Identity = 122/209 (58.37%), Postives = 152/209 (72.73%), Query Frame = 0
BLAST of Lag0015500 vs. TAIR 10
Match: AT3G48110.1 (glycine-tRNA ligases ) HSP 1 Score: 145.2 bits (365), Expect = 8.7e-35 Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Lag0015500 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 5.0e-06 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|