Lag0015491 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015491
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr12: 14180530 .. 14180961 (+)
RNA-Seq Expression	Lag0015491
Synteny	Lag0015491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGACGAGAGCGCGAAAGAAAGGGAGAGTGAGGAGGAAGAGATACCGGTCACACCGGAAGTTCAAAAAGGAAAGTCTAAGAAGAAGAGGACGCCAGAGGAAAAGGAAGCAAAGAGAAGAAGAAGGCAACAGAGGGCTACAGAACAGAAGGAAGTTCAGGAGGTGGCGACGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTGCATACAAACCCAGATACGGTTCAAGAACAGATTGCTGAGAAAAATCAAGAAACAGAGAATGAAGGTGAATAACAAGGAGAAAACACCAGAGCCGGTGCAGGAGGACCATGTTGAAATCATTATGCCTGAACCGCCCAAGGCCGCCGCATCAAAAGGAAGGCGGGTCGCTGAGGGTGGTTCGGACCACGCCATCACCTCCGACGTCGGACTCTGA

mRNA sequence

ATGGCTAAGACGAGAGCGCGAAAGAAAGGGAGAGTGAGGAGGAAGAGATACCGGTCACACCGGAAGTTCAAAAAGGAAAGTCTAAGAAGAAGAGGACGCCAGAGGAAAAGGAAGCAAAGAGAAGAAGAAGGCAACAGAGGGCTACAGAACAGAAGGAAGTTCAGGAGGTGGCGACGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTGCATACAAACCCAGATACGGTTCAAGAACAGATTGCTGAGAAAAATCAAGAAACAGAGAATGAAGGTGAATAACAAGGAGAAAACACCAGAGCCGGTGCAGGAGGACCATGTTGAAATCATTATGCCTGAACCGCCCAAGGCCGCCGCATCAAAAGGAAGGCGGGTCGCTGAGGGTGGTTCGGACCACGCCATCACCTCCGACGTCGGACTCTGA

Coding sequence (CDS)

ATGGCTAAGACGAGAGCGCGAAAGAAAGGGAGAGTGAGGAGGAAGAGATACCGGTCACACCGGAAGTTCAAAAAGGAAAGTCTAAGAAGAAGAGGACGCCAGAGGAAAAGGAAGCAAAGAGAAGAAGAAGGCAACAGAGGGCTACAGAACAGAAGGAAGTTCAGGAGGTGGCGACGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTGCATACAAACCCAGATACGGTTCAAGAACAGATTGCTGAGAAAAATCAAGAAACAGAGAATGAAGGTGAATAACAAGGAGAAAACACCAGAGCCGGTGCAGGAGGACCATGTTGAAATCATTATGCCTGAACCGCCCAAGGCCGCCGCATCAAAAGGAAGGCGGGTCGCTGAGGGTGGTTCGGACCACGCCATCACCTCCGACGTCGGACTCTGA

Protein sequence

MAKTRARKKGRVRRKRYRSHRKFKKESLRRRGRQRKRKQREEEGNRGLQNRRKFRRWRRCCHYCGGRKYSRTCIQTQIRFKNRLLRKIKKQRMKVNNKEKTPEPVQEDHVEIIMPEPPKAAASKGRRVAEGGSDHAITSDVGL

Homology

The following BLAST results are available for this feature:

BLAST of Lag0015491 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0015491 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 1..26 score: 6.7051

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015491.1	Lag0015491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding