Lag0015409 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015409
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RAB6-interacting golgin
Location	chr12: 12530428 .. 12533622 (+)
RNA-Seq Expression	Lag0015409
Synteny	Lag0015409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCCAGAACAAGCTCAGCAGCAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCAGCTCTCTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCACAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCCTCGCTTGCATCCGTGAGGTAAGGGGAAAAATTTTCGAAAATCATCACTAGATTTAAGGGTTTTGCTTAGATTTTGGTTTTTGAGATACCCTTTTAACTTTCTGCTGGGTTTTATATGAATTTGGTGGGATTAGGGGAAAAAGTTGGGGGTAAAATTGCTGAAGATCTCCCTTCTCCTCCGTTTCCGGCCGGAAATGGAGGAGGGAGGTCTCCTCCCTCCCTTTTCTATTTTTTTTTTTTAAAAAAACATTGAAGAAAAAGAAGAGAAGAAGAAAGAAGGGAAGAAGAAGAAAGAAGAAAGAAGAGAAAAAAAAAAATTCAGTCGCCAGCGGCGGCGGCGTGTGGTGGCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGGAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAAGAGAGAAAGAATAAAAAAATAATTAAATATTAATTTTTTAATTTTTTAATATTTTTTATTTAAAAAATAAAACAAAAATAATTTTTTATATTAAAATAATAGTGCCACGTCAGCAACCGTTAAAAGTTAACAGAAAATTTGACGGCATGGACCAAAGTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCCAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTTAATTTTATCTATAAAGTATGTTCAATGAAAATAAAAAAATCACACACAAGTTAATTAATGACAATCTAGACAAGATAAAACCTAAAGCATGCAAACTATGATTAGTTCAAATTTAAATATTATTTACCCAATAGAAATTTAAATAAAACAATAAATCTTAAATCATGCCATCAATAATGATTAATAATTTAACTAAGATAAGAAGGCGAAAAGTAAAAAGCAAGAAACAAAAGAGGGAGAGGAAAGAAAAACACCGAGAATTATAGTGGTTCGACAAATGGCCTACTTCACTCCTCAAGACTCCTTCTTAGTTAATTCACTAGGTGATCCTCTTGTAGGTGAGAACCAAACCAACACACGACCCTCTTTTTTCTAGGCTAAAGAGAAACTCAAGATCCTTTTCACTGGTTTAGGATCAAACCAATTGCTTTTTCTTACAACCCAATGTGTACCCACACCTTAATACAATTCCCAAAAAGAAGAGAACCTCACAAAACAAGTACCTCTAGAAGGCTAATTACACAAAACAAAACTCAGTCTAATGTTATCCCCCTCTAGTGTTGCCTTTAGATCCTAGAATATTATTATTATGAAGAAGAATAAGAGTGAAGAAGAAGAAATGTTAAAAAAAAAAATGATATTTTATTATTATTTATTTATTTTTATTTTATAAAATTAAAAAATAACTTTTTAATAAAAAAATATGCCACGTCAGCAATCTATTAGGGATTTAACATGAAAAATGGATGGAGGGACTAAAATGATACAAAATTCAAACCTTGGAGGCTAAATTGTCGAGTTTGAAACTTAGTGACCAAAATGAAACGTAACCCAAACCTCAAGGACTAAAAGTGTAATTTTCCCAAACTTTTTTTATTCGTTAATTTCTTGCTTTAATTTACTCTAATCTTTTGTATATCTACAATAACATTAGTTTTAGAGAAATATTCGATTTTTTTAGTTCAACAATTGTTGGACATAGATTCAAACAATAAATCTTTATATAATAGTTGGTATCTTATCTCATAAACTATAGTTGATCGACAAAAAAAAAAAATGTTTAAGTTGTCATCTCATATGTACTAATAATGTATTATTATAATTTAGATTTAATAATGATTGAATATAATATTAAGTTGTATGTATGTATATGTATATAGATATATATGTATATCTATGTATGTATAACTTATTTTTGCTATGTCTAATTGTGGAGAGCTTAGCAGTAAAATAACATTAAGAGCTCATTTGATAACGTTCTCGTTTCCTGTTTCTTGTTCCATTTTCTCTTTTTTTTTTAAGAAACATACGTGTTTGATAACTCATCTCTGTTTCTTGTTTCTAAATTTCTAGAAACGTTTGGGCAAAATTTGAGAAACTACAAAAAGTTGTTTCTCAAATTTTGTTTCTGTTTTTTTTTTTTCTATCTTTCATGCATGTATCCATCTCTCTCTCCCAATCCTACATTTTTTTGAGAAACAACTTACATTATTAGTACATATGAGATAACTCATCTCATATGTACTAATAATGTATTATTATAATTTAGATTTAATAATGATTGAATATAATATTAAGTTGTATGTATGTATGTGTATATAGATATATATGTATATCTATGTATGTATAACTTATTTTTGCTATGTCTAATTGTGGAGAGCTTAGCAGTAAAATAACATTAAGAGCTCATTTGATAACGTTCTCGTTTCCTGTTTCTTGTTCCATTTTCTCTTTTTTTTTTAAGAAACATACGTGTTTGATAACTCATCTCTGTTTCTTGTTTCTAAATTTCTAGAAACCTTTAGGCAAAATTTGAGAAACTACAAAAAGTTGTTTCTCAAATTTTGTTTCTGTTTTTTTTTTTTTCTATCTTTCATGCATGTATCCATCTCTCTCTCCCAATCCTACACCAATTTCTTTTTGCCACAGTGGACCTCAGACTACCGACCGTCACTGACCTCCGCCGATCGGTCGCCACCGTACACCTTCGTCGATCGATCGCCACTGTTGACCTCTGTCGATCAGTCCCCACCGTTGACCTCCGACTGTCGGCCGCCATCGACCTCCACCAACCAGCTGCCACCGACCGTCATCGACCTCCAACTACAAGCCGTAGCCAACCTCCACCGACCGACCGCCATCATCAACCTTTGACTACCGGTCGCCATGCTACCGACCTTTGCCAACGACGCCACCGTCGACCTCCAACTGTTGATTGTCGTCGACCTCCACTAACCGACCGCTACCGTCGACCTACGACTATCGGCCGCTATTGA

mRNA sequence

ATGCAGCCAGAACAAGCTCAGCAGCAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCAGCTCTCTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCACAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCCTCGCTTGCATCCGTGAGGGGAAAAAGTTGGGGGTAAAATTGCTGAAGATCTCCCTTCTCCTCCGTTTCCGGCCGGAAATGGAGGAGGGAGTGGACCTCAGACTACCGACCGTCACTGACCTCCGCCGATCGGTCGCCACCGTACACCTTCGTCGATCGATCGCCACTGTTGACCTCTGTCGATCAGTCCCCACCGTTGACCTCCGACTGTCGGCCGCCATCGACCTCCACCAACCAGCTGCCACCGACCGTCATCGACCTCCAACTACAAGCCGTAGCCAACCTCCACCGACCGACCGCCATCATCAACCTTTGACTACCGGTCGCCATGCTACCGACCTTTGCCAACGACGCCACCGTCGACCTCCAACTGTTGATTGTCGTCGACCTCCACTAACCGACCGCTACCGTCGACCTACGACTATCGGCCGCTATTGA

Coding sequence (CDS)

ATGCAGCCAGAACAAGCTCAGCAGCAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCAGCTCTCTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTCAGAGAGAAGGTTCAAGCACAGTTAGGCCGAGTTGAAGAAGAAACTAAACGCCTCGCTTGCATCCGTGAGGGGAAAAAGTTGGGGGTAAAATTGCTGAAGATCTCCCTTCTCCTCCGTTTCCGGCCGGAAATGGAGGAGGGAGTGGACCTCAGACTACCGACCGTCACTGACCTCCGCCGATCGGTCGCCACCGTACACCTTCGTCGATCGATCGCCACTGTTGACCTCTGTCGATCAGTCCCCACCGTTGACCTCCGACTGTCGGCCGCCATCGACCTCCACCAACCAGCTGCCACCGACCGTCATCGACCTCCAACTACAAGCCGTAGCCAACCTCCACCGACCGACCGCCATCATCAACCTTTGACTACCGGTCGCCATGCTACCGACCTTTGCCAACGACGCCACCGTCGACCTCCAACTGTTGATTGTCGTCGACCTCCACTAACCGACCGCTACCGTCGACCTACGACTATCGGCCGCTATTGA

Protein sequence

MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREGKKLGVKLLKISLLLRFRPEMEEGVDLRLPTVTDLRRSVATVHLRRSIATVDLCRSVPTVDLRLSAAIDLHQPAATDRHRPPTTSRSQPPPTDRHHQPLTTGRHATDLCQRRHRRPPTVDCRRPPLTDRYRRPTTIGRY

Homology

[Close]

BLAST of Lag0015409 vs. NCBI nr
Match: XP_004137876.1 (GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_000951 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-29
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          QAQLGRVEEETKRLACIRE
Sbjct: 61 QAQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa] >TYK25229.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-29
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          QAQLGRVEEETKRLACIRE
Sbjct: 61 QAQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. NCBI nr
Match: XP_038903091.1 (GRB10-interacting GYF protein 2-like [Benincasa hispida])

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-28
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          QAQLGRVEEETKRLACIRE
Sbjct: 61 QAQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. NCBI nr
Match: XP_022945279.1 (uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 uncharacterized protein LOC111498737 [Cucurbita maxima] >XP_023539891.1 uncharacterized protein LOC111800435 [Cucurbita pepo subsp. pepo] >KAG6596553.1 hypothetical protein SDJN03_09733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028089.1 hypothetical protein SDJN02_09269 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-27
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          Q QLGRVEEETKRLACIRE
Sbjct: 61 QVQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 6.0e-24
Identity = 73/79 (92.41%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQ E  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQTE--QPQQQLMVQNNQGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          Q QLGRVEEETKRLACIRE
Sbjct: 61 QVQLGRVEEETKRLACIRE 77

[Close]

BLAST of Lag0015409 vs. ExPASy TrEMBL
Match: A0A5D3DPH8 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003590 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          QAQLGRVEEETKRLACIRE
Sbjct: 61 QAQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. ExPASy TrEMBL
Match: A0A0A0LGI7 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          QAQLGRVEEETKRLACIRE
Sbjct: 61 QAQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. ExPASy TrEMBL
Match: A0A1S3B6L6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          QAQLGRVEEETKRLACIRE
Sbjct: 61 QAQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. ExPASy TrEMBL
Match: A0A6J1KYK3 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.6e-28
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          Q QLGRVEEETKRLACIRE
Sbjct: 61 QVQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. ExPASy TrEMBL
Match: A0A6J1G0J9 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.6e-28
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
          MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61 QAQLGRVEEETKRLACIRE 80
          Q QLGRVEEETKRLACIRE
Sbjct: 61 QVQLGRVEEETKRLACIRE 79

[Close]

BLAST of Lag0015409 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 94.7 bits (234), Expect = 9.5e-20
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIRE 80
           AQLGRVE+ETKRL+ IRE
Sbjct: 88  AQLGRVEQETKRLSTIRE 105

[Close]

BLAST of Lag0015409 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 94.7 bits (234), Expect = 9.5e-20
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIRE 80
           AQLGRVE+ETKRL+ IRE
Sbjct: 88  AQLGRVEQETKRLSTIRE 105

[Close]

BLAST of Lag0015409 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 94.7 bits (234), Expect = 9.5e-20
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIRE 80
           AQLGRVE+ETKRL+ IRE
Sbjct: 88  AQLGRVEQETKRLSTIRE 105

[Close]

BLAST of Lag0015409 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19
Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 18 TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 77
          +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29 SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 78 RE 80
          RE
Sbjct: 89 RE 90

[Close]

BLAST of Lag0015409 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 85.9 bits (211), Expect = 4.4e-17
Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 7  QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGR 66
          Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGR
Sbjct: 10 QPPQQMM------SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGR 69

Query: 67 VEEETKRLACIRE 80
          VEEET+RLA IRE
Sbjct: 70 VEEETRRLASIRE 76

The following BLAST results are available for this feature:

BLAST of Lag0015409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137876.1	4.7e-29	100.00	GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical prote...	[more]
XP_008442808.1	4.7e-29	100.00	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 put...	[more]
XP_038903091.1	4.0e-28	98.73	GRB10-interacting GYF protein 2-like [Benincasa hispida]	[more]
XP_022945279.1	2.0e-27	96.20	uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 unchar...	[more]
XP_022144720.1	6.0e-24	92.41	uncharacterized protein LOC111014340 [Momordica charantia]	[more]

BLAST of Lag0015409 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0015409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPH8	2.3e-29	100.00	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LGI7	2.3e-29	100.00	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1	[more]
A0A1S3B6L6	2.3e-29	100.00	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1	[more]
A0A6J1KYK3	9.6e-28	96.20	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1	[more]
A0A6J1G0J9	9.6e-28	96.20	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1	[more]

BLAST of Lag0015409 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36410.2	9.5e-20	67.95	Family of unknown function (DUF662)	[more]
AT2G36410.1	9.5e-20	67.95	Family of unknown function (DUF662)	[more]
AT2G36410.3	9.5e-20	67.95	Family of unknown function (DUF662)	[more]
AT3G09980.1	1.6e-19	82.26	Family of unknown function (DUF662)	[more]
AT3G52920.1	4.4e-17	71.23	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR21470:SF10	ANKYRIN REPEAT 30A-LIKE PROTEIN (DUF662)	coord: 1..80
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 18..79 e-value: 5.5E-23 score: 81.6
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015409.1	Lag0015409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus