Lag0015387 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015387
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionglycosyltransferase family protein 64 protein C5-like
Locationchr12: 11998908 .. 12001609 (-)
RNA-Seq ExpressionLag0015387
SyntenyLag0015387
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCGAGTCCAATAGGGGCCGATGGGAGTGGAGCAGCGAGTAATTTCATTATGGGCGGTGGGGCTGGGGCTACGGGCGACGACAGAGTTGGCGGCGGTGCTAATGGTTCCGGCAGCAGTTGCGGTTGTGGTTGGAAGGGGGAGGGAAACGCGGCGCCGGAAACGTGGGAGGGAGGTCCCTCCCTCCCTCCCCATTACATTCTGCGTTTTTTTTTATTTAAATTATTACTATTTAAAAAAAATAGAAGAAGGAAGAAAGAAGAGAAGGGAAAGAGAAGAGAAAGAGAAGAGAAAATAAAAAAAATAATAAAAAAAAATGTCGTTGGTCGCCGGCGCTGGCGATGGGCGGCAGTCGGTTGTTGAAGAAGTAGAAGAGGAAGATAATAGATTAGAAGAGGAAGAAGAAGAGGAGGAAGAGAGAGGGAAAAAGAAATAAAATAATAATAAAATATATTTTTTATTTAAATTATTACTCTTTTATTTTTAAAAATTAGAAAAATAATTTTTTTTATTAAAATAATAGTGCCACATCAGCAACTGTTAAGATTTAACAGAAAAATTGATGGTAGGGACCAAAATGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAACTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTTTTCTCAATTATATATTTTCTTTTTATACATGGATCACACCTATACACGAATGAATGCACCAATTCAATGTGTAACCATCTCCATATGAACAGTCGCATCCTATCGACATCAATTGCACCTATTGGACAAATTTTCATATAGTTTGACATTTTGACAATTATATATCATATATATTTTTTTCTTATACATGGATCAGACTTATACACGAATGGATGCACCAATTCAATGTGTAACCATCTTTACATGAACAGTTGCATCTTGTCGACATCAATTGCATCTATTGAACTCAATGGAAACTTACTCTTGAAGAGTCGTGTCCCATCAGCAAAGGGTAAAATAGGAATTTACTTTAAAAGTAAGGGCAAAAGAGGAAACAAAAGATTCTCCCCTCTTAGCCCCAAACTTGATCGATGAATCTCATTCGATCGGTGACCCTTGCTTCACGAACCAAAACATATCATCCATTATCGAGTGGATTTCTAATTAAATACAAACATAATTTATAGAAAGAGAAAATAGTCATTATAAGAAGTTTTAAGGGCAATAAGGGAATGTAAAAATTCTCCCCTCTTAGCCCCTTTTAATATAGTAGAGATTATAAAAAATACATCTAGAAATTAATTTAAAAAATACTCCTGAACTTTAACAAGTTTCAAAAATACTTCTGAACTTTAAAAAATGTTAAAAAATACCTCTACCATCAAGTTTTGGATGAAAAACATTAAGGTCCCATCCATTTCGTTTTGGGTTTTTGGTTTTTGAAAATTAAGCTTATAAACACTCTTTTTACCCACAAGTTTCTTTGTTTGTTATCTACCTTATTTTCCATGTTTTCAAAAACCAAGCCAAATTTTGAAAAAAATAAAAATAAAAAACTTGTCTTTGTCAAGTTTTTGGAATTTGACTAGAAACTTAAATGACTCCTTAACAAAAATGAAAACCATTTTAAGAAGATGGAAAGAAAACAAACACAATTTTTAAAAACAAAAAACAAAAAACGAAATGGTTATCAAACGGGGCCTAAAGTTTCAGTTTCATTAATACCCTTGATCTTTTAAAACATTTCAAAAACACATTTATTGGAAAATGCTTCTTTTTTCCTCTTCTTTCCGCAAATTCTTCCTCCATGAAAATTAATATAAATTTTTTTTTATATAAAAACTATGTGCAACACACAACACTAGATGAAAATAAAGTTTGAAATCGAGTTTTCTCTTTCAAAAGTTTGAAGAAGAGAGAAAAAAAAAACATAACTTTTCTTTTTTCTTTTTTTTGCACCCATTATTTGTGTGTATTAGTTATAAACAATAAAATAATGTGGTTGGTGATTACGATGAATTGATGGTGAAGGAGGAGAAAAGTAAGATTATTATTATTATTACTACTTTCTAGAGTTACTAGGGAGGGTTATGGTTAAGGATTTTGAGTTTTTAGAGCTTTTGTAGATTGCGGGTTCAGTCTAGTTTACCAGAATAATTAATCAATTATACATTTGTTCACACGAGACTTCAAAGATGGAGACACGTGGAGTAAATAATATATTGTATTGATGTTTGTATGCGTGTGGGTATACAATCTCTAACTTTAATCCTCTGATTCTCTCTCTTGTGTATGTGTGGTTGTGTTTCACTCGAGGACTGAATGCTTATTCTCGAGTCTGAAGCTTCAATTGATCATTGAAGCTTTTGGAATCTTCGGATCCTGAAGTCTTGGAGTCTTGAAGAGCTTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAGTCCTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTAAAGAGTCTTTGGTTTTCAAGGATTGTTGAAGTCTTCCAGTCTTGAAGGATCTTCTTGGGCCAGTTTGTTGAGCTTCTTGGATGATCGGTCTGCTAGGTTGATGATCTCTTGGATCGGCCTATTGGCTTGTTGATCTTCTTGGATGATCGACATGTTGGCGTGATGATCTCTTGGATCGCTTGTTGGCTTGTTGATCTTCCTGGATGA

mRNA sequence

ATGGGTTCGAGTCCAATAGGGGCCGATGGGAGTGGAGCAGCGAGTAATTTCATTATGGGCGGTGGGGCTGGGGCTACGGGCGACGACAGAGTTGGCGGCGGTGCTAATGGTTCCGGCAGCAGTTGCGGTTGTGGTTGGAAGGGGGAGGGAAACGCGGCGCCGGAAACGTGGGAGGGAGGATTGTTGAAGTCTTCTAGTCCTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTAAAGAGTCTTTGGTTTTCAAGGATTGTTGAAGTTGATGATCTCTTGGATCGGCCTATTGGCTTGTTGATCTTCTTGGATGATCGACATGTTGGCGTGATGATCTCTTGGATCGCTTGTTGGCTTGTTGATCTTCCTGGATGA

Coding sequence (CDS)

ATGGGTTCGAGTCCAATAGGGGCCGATGGGAGTGGAGCAGCGAGTAATTTCATTATGGGCGGTGGGGCTGGGGCTACGGGCGACGACAGAGTTGGCGGCGGTGCTAATGGTTCCGGCAGCAGTTGCGGTTGTGGTTGGAAGGGGGAGGGAAACGCGGCGCCGGAAACGTGGGAGGGAGGATTGTTGAAGTCTTCTAGTCCTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTAAAGAGTCTTTGGTTTTCAAGGATTGTTGAAGTTGATGATCTCTTGGATCGGCCTATTGGCTTGTTGATCTTCTTGGATGATCGACATGTTGGCGTGATGATCTCTTGGATCGCTTGTTGGCTTGTTGATCTTCCTGGATGA

Protein sequence

MGSSPIGADGSGAASNFIMGGGAGATGDDRVGGGANGSGSSCGCGWKGEGNAAPETWEGGLLKSSSPEGSSVFKKSWGLEVLKSLWFSRIVEVDDLLDRPIGLLIFLDDRHVGVMISWIACWLVDLPG
Homology
[Close]
BLAST of Lag0015387 vs. NCBI nr
Match: KAG7031996.1 (Glycosyltransferase family protein 64 protein C5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-06
Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 1  MGSSPIGADGSGAASNFIMGGGAGATGDDRVGGGANGSGSSCGCGWK 48
          MGSSPIG  GSGAA+NF+MG GA  TG   VGGGANGS SSCGCGWK
Sbjct: 1  MGSSPIGTGGSGAANNFVMGSGALGTGGGGVGGGANGSTSSCGCGWK 47

[Close]
BLAST of Lag0015387 vs. NCBI nr
Match: KAG6601201.1 (Glucosamine inositolphosphorylceramide transferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-06
Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 1  MGSSPIGADGSGAASNFIMGGGAGATGDDRVGGGANGSGSSCGCGWK 48
          MGSSPIG  GSGAA+NF+MG GA  TG   VGGGANGS SSCGCGWK
Sbjct: 1  MGSSPIGTGGSGAANNFVMGSGALGTGGGGVGGGANGSTSSCGCGWK 47

[Close]
BLAST of Lag0015387 vs. NCBI nr
Match: XP_022993277.1 (glycosyltransferase family protein 64 protein C5-like [Cucurbita maxima])

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1  MGSSPIGADGSGAASNFIMGGGAGATGDDRVGGGANGSGSSCGCGWK 48
          MGSSPIGA GSGAA+N +MG GA   G   VGGGANGS SSCGCGWK
Sbjct: 1  MGSSPIGAGGSGAANNSVMGSGASGKGGGVVGGGANGSTSSCGCGWK 47

[Close]
BLAST of Lag0015387 vs. NCBI nr
Match: XP_023539804.1 (glycosyltransferase family protein 64 protein C5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.2 bits (139), Expect = 6.2e-05
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1  MGSSPIGADGSGAASNFIMGGGAGATGDDRVGGGANGSGSSCGCGWK 48
          MGSSPIGA GSGAA+N +MG GA  T    VGGGANGS SSCGCGWK
Sbjct: 1  MGSSPIGAGGSGAANNSVMGSGALGTVGGGVGGGANGSTSSCGCGWK 47

[Close]
BLAST of Lag0015387 vs. NCBI nr
Match: XP_022957563.1 (glycosyltransferase family protein 64 protein C5-like [Cucurbita moschata])

HSP 1 Score: 55.5 bits (132), Expect = 4.0e-04
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1  MGSSPIGADGSGAASNFIMGGGAGATGDDRVGGGANGSGSSCGCGWK 48
          MGSSPIGA GSGAA+N +MG GA  TG    GGGANGS SSCGCGWK
Sbjct: 1  MGSSPIGAGGSGAANNSVMGSGALGTG----GGGANGSTSSCGCGWK 43

The following BLAST results are available for this feature:
BLAST of Lag0015387 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7031996.11.9e-0676.60Glycosyltransferase family protein 64 protein C5, partial [Cucurbita argyrosperm... [more]
KAG6601201.11.9e-0676.60Glucosamine inositolphosphorylceramide transferase 1, partial [Cucurbita argyros... [more]
XP_022993277.11.3e-0574.47glycosyltransferase family protein 64 protein C5-like [Cucurbita maxima][more]
XP_023539804.16.2e-0574.47glycosyltransferase family protein 64 protein C5-like [Cucurbita pepo subsp. pep... [more]
XP_022957563.14.0e-0474.47glycosyltransferase family protein 64 protein C5-like [Cucurbita moschata][more]
BLAST of Lag0015387 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015387.1Lag0015387.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016757 glycosyltransferase activity