Lag0015360 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAGTTTCTCCTCAGTCGATATTAACAGGGTGTACAGGATCAAAGCACCCTTGAACCCAAGAGGGAATGATGTGATTAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAAACTTGTGGCCAACAAGGGGGTTCAATGGAAAGAATCACAGATAAAAGTGAAGTCGTTAGTGTCAAGCGATCTAAAGCCAGAATCGGCAGCTTGGCTTCACTTCATCAAAAACCGCTTGATGCCAACCACCCACGACAGCACAATTTTAGTGGATAGAGTTATGCAACTCTATTGCCTTATGAAGGGGTTGGAGATCAATGTAGGGAGCATTATCAAGGAAGAGATTTTAGCCTGTGGGAGAAAGCGAGCATGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGCCAAAGGGTGAAGATCGTTCTGGGCAAGGACGAGGAGCTCACTTTTTCAAGTCGACCATTGGCATGTCCTTGATCGGAAAGCTCCAACAGAACAATATCCAGAGGAAAGACAAAGCCTCTACATCTCAGGCTACTACTCCACCTACAGGGCCAAATGTAGCATCTTCATCCCAGCACACTCCTTTTACAGGGCCTTCACCAACATCAGAAGCCCTAGGCATGGTCTACCGCCAGTTAGATCAAATCAGGGAAAACCCATAAGACGTACTAGGTATATGCAAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATCGCCCCAAGCATTGCTCCGGTCTTTCCCAATTTTCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGATGAGAAAGAGAGTTCCTTGGACGAGGAATAG ATGGTCAGTTTCTCCTCAGTCGATATTAACAGGGTGTACAGGATCAAAGCACCCTTGAACCCAAGAGGGAATGATGTGATTAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAAACTTGTGGCCAACAAGGGGGTTCAATGGAAAGAATCACAGATAAAAGTGAAGTCGTTAGTGTCAAGCGATCTAAAGCCAGAATCGGCAGCTTGGCTTCACTTCATCAAAAACCGCTTGATGCCAACCACCCACGACAGCACAATTTTAGTGGATAGAGTTATGCAACTCTATTGCCTTATGAAGGGGTTGGAGATCAATGGTGAAGATCGTTCTGGGCAAGGACGAGGAGCTCACTTTTTCAAGTCGACCATTGGCATGTCCTTGATCGGAAAGCTCCAACAGAACAATATCCAGAGGAAAGACAAAGCCTCTACATCTCAGGCTACTACTCCACCTACAGGGCCAAATGTAGCATCTTCATCCCAGCACACTCCTTTTACAGGGCCTTCACCAACATCAGAAGCCCTAGGCATGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGATGAGAAAGAGAGTTCCTTGGACGAGGAATAG ATGGTCAGTTTCTCCTCAGTCGATATTAACAGGGTGTACAGGATCAAAGCACCCTTGAACCCAAGAGGGAATGATGTGATTAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAAACTTGTGGCCAACAAGGGGGTTCAATGGAAAGAATCACAGATAAAAGTGAAGTCGTTAGTGTCAAGCGATCTAAAGCCAGAATCGGCAGCTTGGCTTCACTTCATCAAAAACCGCTTGATGCCAACCACCCACGACAGCACAATTTTAGTGGATAGAGTTATGCAACTCTATTGCCTTATGAAGGGGTTGGAGATCAATGGTGAAGATCGTTCTGGGCAAGGACGAGGAGCTCACTTTTTCAAGTCGACCATTGGCATGTCCTTGATCGGAAAGCTCCAACAGAACAATATCCAGAGGAAAGACAAAGCCTCTACATCTCAGGCTACTACTCCACCTACAGGGCCAAATGTAGCATCTTCATCCCAGCACACTCCTTTTACAGGGCCTTCACCAACATCAGAAGCCCTAGGCATGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGATGAGAAAGAGAGTTCCTTGGACGAGGAATAG MVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQIKVKSLVSSDLKPESAAWLHFIKNRLMPTTHDSTILVDRVMQLYCLMKGLEINGEDRSGQGRGAHFFKSTIGMSLIGKLQQNNIQRKDKASTSQATTPPTGPNVASSSQHTPFTGPSPTSEALGMSLLPQEEEDSDEEEDEENDEKESSLDEE Homology
BLAST of Lag0015360 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 92.8 bits (229), Expect = 3.7e-15 Identity = 42/106 (39.62%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Lag0015360 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-13 Identity = 41/105 (39.05%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of Lag0015360 vs. NCBI nr
Match: XP_038888747.1 (vicilin-like seed storage protein At2g18540 [Benincasa hispida]) HSP 1 Score: 75.5 bits (184), Expect = 6.1e-10 Identity = 33/87 (37.93%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Lag0015360 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-09 Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Lag0015360 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]) HSP 1 Score: 71.6 bits (174), Expect = 8.7e-09 Identity = 34/103 (33.01%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Lag0015360 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 8.5e-10 Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Lag0015360 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 4.2e-09 Identity = 34/103 (33.01%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Lag0015360 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08 Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of Lag0015360 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.6e-08 Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Lag0015360 vs. ExPASy TrEMBL
Match: A0A0A0L2P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569710 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.6e-08 Identity = 33/95 (34.74%), Postives = 57/95 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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