Lag0015310 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTGAAAACAACATTTCTCAATGGAGATTTAAAAGAGGAGATATATATGATACAACCCGAAGGCTTTGTAATTCCTGGTCAAGAAGACAAGGTATGTCAACTTAAAAAATCTCTTTATGGTCTTAAACAAGCTCCCAAACAATCGTATGAGAAATTTAATAGTACCTTAGTAAACAATGAGTTTATGGTGAATTCTTCCGACACATGTGTTTACTCGAAATTGTTTGGTGTTGATTATGTGATTATTTGCTTGTTTGTTGATGAAATGCTTATTTTCGGTACGAACTTACAAGTAATAAATGATACCAAGTTATTTTTATCCTCACACTTTGAGATGAAAGATTTAGGTGAGGCCGATGTGATACTTGGTGTTAAATTGAGAAAAACCGAAAATGGTATTCATTGAGTCAATCACACTATATTGAAAAGTTGCTAAAGAGATTTGATTGTTTTGATGATATACCTATAAGAACACCTTATGATGCTAGTATGAAACTTAAGAAAAATAAAGGGGATAGTGTCTCTCAATCTGAATATGCAAAAATTATAGGTAGCGTGATGTACCTGATGAATTATACTAGACCTGATATTGCATATGTTGTGAGTAGATTGAGTAGGTATACGCATAATCCCAATAAAGATCATTGGGTTGCACTTCATCGTTTGCACTTCATCCTAGAAAATCATTATCACTAAAGCAAATATATACACAACAGGCATGCAAGATATACATTAAGCACAAACGTTGGGCCGACGCACAGATGCTCAGGGCTATTCCTGCAGTATTAGAAGGTTATTGTGATGCAAACTGAGTAACTGATGAAGTAAGCTCAACTAACGGGTATGTGTTCGTTTTTGGAGGAGGAGCTACATCATTGAAATCTGAAAAGCAGACGTGCATTGTGCGATCCACCATGGAGTCAGAGTTTATAACTCTTGAGCTAGCAGAGCAAGAGGCGGAGTGGTTGAGAAGTTTACTTCAAGACGTACCACTGTGGGGGGCGTCTATTCCAGTCTCCTTGCACTGTGATTCACAAGCAGCATATACGCCTGAGACATGGAGTTGTGAAACAATTGTTGAAAAGTGGAATTATCTCCTTGGAGTATGTGAGGTCTGAGAGGAATTTGGCAGATCCTCTCACCAAAGGCCTAACAAGGAGAGTAATTCTAGAGCCCTCAGCAAGTATGGGACTCAAATTGTTGAAATGAGTCCATAACCCAGTATTTGGGTGGTCCAAGTACGGACTTGATGGACATATTTTGGTAAGTCTTCATAGCTCAAGATTTTGAGTGGTTTACTGAGGTAGACTTGATGAAGCATGACGTGATTGTGAAGGTGTGGCCGCCTTCTATGAAAGAGTGTAATGGATCTCTTTCTAGAGATTTCACAATGACCCAAGGTATTTTGTGCATGGCCTTAAAAATAACACTTGTTCTACTATTGTATCGCGGAATCAAGGGAAACTTGAGGATTCAAACGTGTTGTGGGGTTCTAAACCATGACTATTGAAAGTTCAAAAGGTAACTTACTTTCTCTATGATGGTTATTGCCTTACTTCACTATGCATTAATTCAAATCGAAAGATATTAATGCTTAAGTTTAATATCCTCCTTTGCTCAGAAAAATATTGCTTACCATCATTCGTGGGGGATTGTTGGGAATGACTAGCATATTTGCTTGTATATTTTGGCTTTTCCATGTTTTTCATTATGTTTGTCCCACATGGAAAGATTTGGAGTTGGGAGGAGTGTTTTTATACAATCATTTTTCCCTACTCTTGTAAGAGTGGTTAAAGGTGGTGCCTAAACCTTTTCCCACACATGCGCGCCGCCGCCGGTCGGACGCGTAATAAAGAGAGGGGTTTTATACCTACCTTTTTGCCAAAATATTTTTTAATCATTCTCGATATCCCATGTGTCGGCAGCGTCTACGTCCACGTGTCAATCCGGCGTCCACACACTCCAGCAGTTGACCAGTCCGTTCGTTGACCGAGTTTGGTGCCTTTTTTGCGTGCCTTTGACCGAGGAGTTGTTATGCGTGGACTCCTCCATGGCTGACACGTGGCAGCTGGACCCTGTTTTGTGGAAGACGGTTATTTTTTAAGCCTATAAAAGAAACCTCTGAGCATAGTGGAAAGTATCGAATTCATTTTCATTCTTCCTACTTTCTCTTCTGATTCCAATCATTCTCTCTCGAGTGCACGAACGAGGAGGGTGTTGTGTTAACCTTGGGGAGCAACCGACAATAACGATTTAGCACTGTGGTCGTGCCGAAATTACTTTCAAGGCAGTGGTTATCTCCACGACACAACAATTGTTTTTCCATTTTTCTACCTACAAAAGGGGTGGTGAACAGAAAAAGGAGAACCTTCTTTTTTTGTTTATGTGAAACAAACGAAGGGAAAGGAGAAAAAAGAGGACGAAAGGAAGAGAGAGGACCAAAAAGTCACAGGCGGCGGCCAATCGTGAACGAGCGGTGGTCACCGGTTGCCGGCGACTTGTTGAAGAAGAAGAAGAAAAAAAGAAGAAGAAGAAGAATAAAAGAGAGAGAGAAAGAATTAAAAAATAATAATAAAATAATAATATTTTTATATTTTTAATATATTAATATTTTAAAAATTCAAAAATAATTTTTTTAATAAAAAATAGTGCCACATAATCAAACCGTTAAGGGGGTGTTTGAGGCAATGAGGTGGAGTTCTGAAGTCTGGAGTTGTGAAGTCTGGTGAGTTGTGAAGTCTGGAGAGTTATGAAGTATGTATTTGTAGTGCAAAGTTGTTTAGTCTAGAGTTAGGAAGTTTGTGTTTGGGGAGCAGAGTTATGAAGTCTGAAGTATGTTGTCATTTTAGCAATTTTTTTCTTCTGTTTTTTTTAGTTCTTTTAAAATAATTTTTCCAACCACAATTAATAAAGATGTTTGTGGAAAAAAAAATCAATTTTTGTTCTTGAATTTGTCCAAATTGTATTAATTTTCACTACTTTCAATTTAAGCTTAATACATATGATGTCATTTTTATCCAATATTCAATTTGTGCTCGATTCACCGATTAATTTTAATAAAAGATCAAGTAAAAATCTTTATGAACCTATTAGTTTCAACAAAAATAAAGTATTACACAAAATTACAAAATCAACCAATGAATAAATTAATAAAAATTAAACTCTAGTGTTGTTTTTCTATGAAGCTACTTTGAAATAACATATGCTTTACATTTGTTAAATGCATATAAGATACTGTTATTTTTCTCCCTTTTTTCTATGCGTTGTGTTTACTTGATCTTGATGATGGAGTCTATTTTCTAATTTCTAAAATATGTGCACTGCTCAAGGATAGATCATGCCAAGTATTCCTTATTAATTTCAATTTCACTTGAAAATTCCAAACTCTTTGGGCTACTTGATAATGAAGATTTCAAAGCAACTAAAAAGTTTCAAAATTTTGAGATACTCATCTATATCATTCCACATCACCTCCAAAAGTGAAAGATTAGAGTCAGAAAGTTCTCAATACAAACAACTCAAGCCAACCAAACATATTGGAATACAATTTTATTTATCAGAACATAGACTAACTTCATTTCTATCTCATAACGTAGTCATTTTTATAGAATTTCTTTCATGTGCACAAAATCAATTACAAATGTCAATCACAAAAGACCACATCAGAAAAAGGCATGAAAAATGCAATAAAATAAGAAAAAAATTGCATTCCTAAAGTTGAACAGCAGAAAAATCATCATAATACAGTGTCACAACATTTCTTTGTTTTGGAGCATTTTTCTGAGCTATCTACAAGGACAGTTTTCCTCTTTTTGTTCCTTCTTAATGTCTCATATACAATTGCCTTTTCTAATTGCTCAACCCACGAGCATAGCATCCGTGTTTGCACCTCATTCTTTTCAGACAACTCCTCCATCACCTTGATCATTCTCTTCTTCTCCACCATCATTTTCTACACCAAATACTTAACCTACCACATAGTTCATTTAACACAAATAACCCAATGCAAACAATTTACACATGAATGGTTAGAAAGTAACAGAAGAGTAAACAAGTTAAGGGATAAAAAGTAACAATCTAATCGGCCTCAAGTACATGAGATTCAATCATTAAAAAAAGAGGGAAATATGATAGAACACACTAAACAAAACAAAAAAAATCAGTAACAAAAAAAGAGGAAAAAAGGATAGAACCCATGAAACAGAAGCAATAGACGATAACAAAAAAAAGGAAAAATCATAGAACCCACGAAATAGAAGCAAAAAACGATAACAAACAAAAAAGAACCAAGAATCCCTAACAGAAAAAAATAATAACAGGAGGGAAATATGTTATAATTGATTACACAGAACCAAGAAATGGTTAAAAAAAAAAAGAATTACGGATTGCCTACATGTGATGTACTCATTGTCAGCCGGCTAAAAGGGAAAAGAAAACAAACCTGCGATACCCACCCCTCACCAAGCTCCAACGTACCTACCAAGCGAGTCCAACATGCTCTCTATCAAGGGAACAACCATAGACGCAACAAGACGGTTGAAGCGACAAGGAGTGGGTAGATTCTGAAACAACAAAAATAAAGTTAGGGTTTCCAAAACAAATGCGATCCGGAAAAAAACAGAGAGGGAAACGACAAAGGTGAGGGAAAGAGAGATCTGAAAGGAAAAAACAGAAAAGGAAAGAGACATCCGAGAAGGAAACAGTGAATGTGAGGGAAAGAGAGAACATACCTTTGAGATTTAGGACCAACGTCAAGATGGAGAGACGAGAAGAGAGATTTGAGAGAAGGAAGCAACATGAAAATGAAGAGATTCTATTGCATGGCTTCCAAGTGTCTGAGGAGATTGATAGCGAGCATAACTAGCTATTTTTTCCTAATTAATTTAGCTAGTCTTTGATAATTAATTGGCCAAATTTATGCATATTAGTGTTTTATTTGTAGGAAATATATATTGGAGCTAAATTGAGAAATTGGAGTTAATCAGGTGTTCGGGACGTGAAAAAGGCCAAAGAAACAGAGTTGGATCAAGTTGGAAGCTTATTGAATAAGGGCAAATCGAGGACCAGCGTCGAGACCCTAGACCTTGGGCGTCTCGACGCTGCACACTTTACTTTTCTAATTTGGGCGGCAGCAGACACAGCATCGCGACGCTCTGTCAATAGCGTTGTGACGCTCTCATATTTTTCCTTTACAGAATGCTGGATTCACTACAGCGTCGCGACGCTGTGCCTATAG ATGGATGTGAAAACAACATTTCTCAATGGAGATTTAAAAGAGGAGATATATATGATACAACCCGAAGGCTTTGTAATTCCTGGTCAAGAAGACAAGGTATGTCAACTTAAAAAATCTCTTTATGGTCTTAAACAAGCTCCCAAACAATCGTATGAGAAATTTAATAGTACCTTAGTAAACAATGAGTTTATGGTGAATTCTTCCGACACATGTGTTTACTCGAAATTGTTTGGTGTTGATTATGTGATTATTTGCTTGTTTGTTGATGAAATGCTTATTTTCGGTAGCGTGATGTACCTGATGAATTATACTAGACCTGATATTGCATATGTTGTGAGTAGATTGAGTAGCTCAACTAACGGGTATGTGTTCGTTTTTGGAGGAGGAGCTACATCATTGAAATCTGAAAAGCAGACGTGCATTGTGCGATCCACCATGGAGTCAGAGTTTATAACTCTTGAGCTAGCAGAGCAAGAGGCGGAGTGGTTGAGAAGTTTACTTCAAGACGTACCACTGTGGGGGGCGTCTATTCCAGTCTCCTTGCACTGTGATTCACAAGCAGCATATACGCCTGAGACATGGAGTTGTGAAACAATTGTTGAAAAGTGGAATTATCTCCTTGGAGTATACTTGATGAAGCATGACGTGATTGTGAAGGTGTGGCCGCCTTCTATGAAAGAGTGTAATGGATCTCTTTCTAGAGATTTCACAATGACCCAAGCGTCTACGTCCACGTGTCAATCCGGCGTCCACACACTCCAGCAGTTGACCAGTCCGTTCGTTGACCGAGTTTGGTGCCTTTTTTGCGTGCCTTTGACCGAGGAGTTGTTATGCGTGGACTCCTCCATGGCTGACACGTGGCAGCTGGACCCTGTTTTGTGGAAGACGTCTGGAGTTGTGAAGTCTGGTGTTCGGGACGTGAAAAAGGCCAAAGAAACAGAGTTGGATCAAGTTGGAAGCTTATTGAATAAGGGCAAATCGAGGACCAGCGTCGAGACCCTAGACCTTGGGCGTCTCGACGCTGCACACTTTACTTTTCTAATTTGGGCGGCAGCAGACACAGCATCGCGACGCTCTGTCAATAGCGTTGTGACGCTCTCATATTTTTCCTTTACAGAATGCTGGATTCACTACAGCGTCGCGACGCTGTGCCTATAG ATGGATGTGAAAACAACATTTCTCAATGGAGATTTAAAAGAGGAGATATATATGATACAACCCGAAGGCTTTGTAATTCCTGGTCAAGAAGACAAGGTATGTCAACTTAAAAAATCTCTTTATGGTCTTAAACAAGCTCCCAAACAATCGTATGAGAAATTTAATAGTACCTTAGTAAACAATGAGTTTATGGTGAATTCTTCCGACACATGTGTTTACTCGAAATTGTTTGGTGTTGATTATGTGATTATTTGCTTGTTTGTTGATGAAATGCTTATTTTCGGTAGCGTGATGTACCTGATGAATTATACTAGACCTGATATTGCATATGTTGTGAGTAGATTGAGTAGCTCAACTAACGGGTATGTGTTCGTTTTTGGAGGAGGAGCTACATCATTGAAATCTGAAAAGCAGACGTGCATTGTGCGATCCACCATGGAGTCAGAGTTTATAACTCTTGAGCTAGCAGAGCAAGAGGCGGAGTGGTTGAGAAGTTTACTTCAAGACGTACCACTGTGGGGGGCGTCTATTCCAGTCTCCTTGCACTGTGATTCACAAGCAGCATATACGCCTGAGACATGGAGTTGTGAAACAATTGTTGAAAAGTGGAATTATCTCCTTGGAGTATACTTGATGAAGCATGACGTGATTGTGAAGGTGTGGCCGCCTTCTATGAAAGAGTGTAATGGATCTCTTTCTAGAGATTTCACAATGACCCAAGCGTCTACGTCCACGTGTCAATCCGGCGTCCACACACTCCAGCAGTTGACCAGTCCGTTCGTTGACCGAGTTTGGTGCCTTTTTTGCGTGCCTTTGACCGAGGAGTTGTTATGCGTGGACTCCTCCATGGCTGACACGTGGCAGCTGGACCCTGTTTTGTGGAAGACGTCTGGAGTTGTGAAGTCTGGTGTTCGGGACGTGAAAAAGGCCAAAGAAACAGAGTTGGATCAAGTTGGAAGCTTATTGAATAAGGGCAAATCGAGGACCAGCGTCGAGACCCTAGACCTTGGGCGTCTCGACGCTGCACACTTTACTTTTCTAATTTGGGCGGCAGCAGACACAGCATCGCGACGCTCTGTCAATAGCGTTGTGACGCTCTCATATTTTTCCTTTACAGAATGCTGGATTCACTACAGCGTCGCGACGCTGTGCCTATAG MDVKTTFLNGDLKEEIYMIQPEGFVIPGQEDKVCQLKKSLYGLKQAPKQSYEKFNSTLVNNEFMVNSSDTCVYSKLFGVDYVIICLFVDEMLIFGSVMYLMNYTRPDIAYVVSRLSSSTNGYVFVFGGGATSLKSEKQTCIVRSTMESEFITLELAEQEAEWLRSLLQDVPLWGASIPVSLHCDSQAAYTPETWSCETIVEKWNYLLGVYLMKHDVIVKVWPPSMKECNGSLSRDFTMTQASTSTCQSGVHTLQQLTSPFVDRVWCLFCVPLTEELLCVDSSMADTWQLDPVLWKTSGVVKSGVRDVKKAKETELDQVGSLLNKGKSRTSVETLDLGRLDAAHFTFLIWAAADTASRRSVNSVVTLSYFSFTECWIHYSVATLCL Homology
BLAST of Lag0015310 vs. NCBI nr
Match: TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 236.9 bits (603), Expect = 2.9e-58 Identity = 145/332 (43.67%), Postives = 166/332 (50.00%), Query Frame = 0
BLAST of Lag0015310 vs. NCBI nr
Match: KAD6453934.1 (hypothetical protein E3N88_08640 [Mikania micrantha]) HSP 1 Score: 217.2 bits (552), Expect = 2.4e-52 Identity = 138/333 (41.44%), Postives = 160/333 (48.05%), Query Frame = 0
BLAST of Lag0015310 vs. NCBI nr
Match: RVW67328.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-50 Identity = 111/213 (52.11%), Postives = 138/213 (64.79%), Query Frame = 0
BLAST of Lag0015310 vs. NCBI nr
Match: GEW19298.1 (peroxidase 72 [Tanacetum cinerariifolium]) HSP 1 Score: 211.1 bits (536), Expect = 1.7e-50 Identity = 111/200 (55.50%), Postives = 139/200 (69.50%), Query Frame = 0
BLAST of Lag0015310 vs. NCBI nr
Match: KAG7551885.1 (Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 200.7 bits (509), Expect = 2.3e-47 Identity = 135/333 (40.54%), Postives = 155/333 (46.55%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.7e-22 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.3e-13 Identity = 40/104 (38.46%), Postives = 65/104 (62.50%), Query Frame = 0
HSP 2 Score: 46.2 bits (108), Expect = 9.6e-04 Identity = 25/71 (35.21%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 77.0 bits (188), Expect = 5.1e-13 Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-12 Identity = 39/109 (35.78%), Postives = 68/109 (62.39%), Query Frame = 0
HSP 2 Score: 45.4 bits (106), Expect = 1.6e-03 Identity = 25/71 (35.21%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy TrEMBL
Match: A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.4e-58 Identity = 145/332 (43.67%), Postives = 166/332 (50.00%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy TrEMBL
Match: A0A5N6PGV2 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_08640 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52 Identity = 138/333 (41.44%), Postives = 160/333 (48.05%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy TrEMBL
Match: A0A438G546 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3124 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 6.4e-51 Identity = 111/213 (52.11%), Postives = 138/213 (64.79%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy TrEMBL
Match: A0A2N9EQT1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4851 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50 Identity = 137/333 (41.14%), Postives = 156/333 (46.85%), Query Frame = 0
BLAST of Lag0015310 vs. ExPASy TrEMBL
Match: A0A2N9H4B0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50 Identity = 137/333 (41.14%), Postives = 156/333 (46.85%), Query Frame = 0
BLAST of Lag0015310 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 72.4 bits (176), Expect = 8.9e-13 Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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