Lag0015290 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015290
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr12: 9764654 .. 9766520 (+)
RNA-Seq Expression	Lag0015290
Synteny	Lag0015290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATTGGTCTGGAACGGGACAGAGACACCATCAACAAATTGATGGCATTTTGTGCAGACCCATCAGTTGGAAACTTGCACTACGCGGAGAGGATGTTTGATTACGTACATGGCCCATCTCTATTTGTTTATAATGTGATGGTTAAAGCATATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCATTTGTTCTGAAAGCCATTGGTTGCTTAAGGACGTGAGGCAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAGACGGGAATGGCTTATGATAATTATGTTTGTAATTCACTTATGGATATGTATGCTGAATTGGGCAAGGTTGAGAATGCTAAGAAGTTGTTTGACGAAATGCCAACTAGAGATTCTATTTCTTGGAATGTTATGATTTCTGGGTATGTTAGGTGTCGGAGATTTGAGGATGCGGTTAGTGTATTTAAGGAAATGCAGCAAGAGAGCAATGAGAAACCTGGTGAAGCTACTGTAGTTAGCACTCTTTCTGCCTGTACAGCACTAAAAATCTGGAGCTTGGGGAGGAAATTCACAACTATGTTAGAAAGGAGCTTGGTTTTACCACTATAATCAACAATGCATTGTTAGATATGTATGCAAAATGTGGGTGTTTAAGTATTGCCCGCAAAGTATTTGATGAAATGCTGATGAAAAATGTAATTTGTTGGACAAGCATGATTTCTGGCTATATTAACTGTGGTGATTTGAGAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCTATGATTAATGGGTATGTGCAGTTCAACCATTTTGACGAGGCTGTGGCCTTGTTCCGTGAAATGCAAATTCGAAAGGTTAAACCAGATAAGTTCACGGTGGTCTCTCTTCTTACAGGTTGTGCACAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATATTGATGAGAACAGAATAACAATGGATGCCGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGACGTGTGGATAAATCTTTAGAAATTTTCTATGAGTTACTGGAGAAGGACACATCATCCTGGACATCGATGATTTGCGGTCTCGCCATGAATGGAAAGACTGGTGAAGCACTTAGGTTGTTCTCAGAAATGGAACTTGGGGGAGCTAAACCTGATGATATCACCTTTATTGGTGTTTTAAGTGCCTGTAGTCATGGTGGACTAGTTGAGGAAGGTCGTAGGTTTTTCAACTTGATGAAAAAGGTTTATCAGATTGAGCCAAAGGTAGAACATTATGGGTGCGTAATTGACCTCCTTGGTCGTGCTGGGCTGTTGGATGAAGCAGAGGAACTGATACAAGAGATTCCCAATGAAAATGACGAAATTGTGATTCCACTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCACAACAATGTTGACATGGGGGAAAGAATAGCTAAAAAACTGGTAAACATTCAATCATGTGATTCTAGCATTCACACACTTCTTGCAAATATATACGCTTCTGCTGACAGGTGGGAAGATGCAAAGAAAGTGAGAAAGAAAATGAAAGAACTTGGAGTTAAGAAGATGCCTGGATGTAGTTCAATCGAGGTCGATGGCATTGTTCACGAGTTTCTTGTCGGGGATCCATCTCATCCAGAAATGATAGAAATATGCTCCATGTTGGATAGAGTGGCTGGACCATTACTAGGATCTAAGGAATCTCATCTTGAAAGTGTGATGCCACTTCACATGGACGTCAATATTGCAGTTTGA

mRNA sequence

ATGGATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATTGGTCTGGAACGGGACAGAGACACCATCAACAAATTGATGGCATTTTGTGCAGACCCATCAGTTGGAAACTTGCACTACGCGGAGAGGATGTTTGATTACGTACATGGCCCATCTCTATTTGTTTATAATGTGATGGTTAAAGCATATGCCAAAAGGGGTATTTTCAGAAAAGACGTGAGGCAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAGACGGGAATGGCTTATGATAATTATGTTTGTAATTCACTTATGGATATGTATGCTGAATTGGGCAAGGTTGAGAATGCTAAGAAGTTGTTTGACGAAATGCCAACTAGAGATTCTATTTCTTGGAATGTTATGATTTCTGGCACTAAAAATCTGGAGCTTGGGGAGGAAATTCACAACTATGTTAGAAAGGAGCTTGGTTTTACCACTATAATCAACAATGCATTGTTAGATATGTATGCAAAATGTGGGTGTTTAAGTATTGCCCGCAAAGTATTTGATGAAATGCTGATGAAAAATGTAATTTGTTGGACAAGCATGATTTCTGGCTATATTAACTGTGGTGATTTGAGAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCTATGATTAATGGGTATGTGCAGTTCAACCATTTTGACGAGGCTGTGGCCTTGTTCCGTGAAATGCAAATTCGAAAGGTTAAACCAGATAAGTTCACGGTGGTCTCTCTTCTTACAGGTTGTGCACAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATATTGATGAGAACAGAATAACAATGGATGCCGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGACGTGTGGATAAATCTTTAGAAATTTTCTATGAGTTACTGGAGAAGGACACATCATCCTGGACATCGATGATTTGCGGTCTCGCCATGAATGGAAAGACTGGTGAAGCACTTAGGTTGTTCTCAGAAATGGAACTTGGGGGAGCTAAACCTGATGATATCACCTTTATTGGTGTTTTAAGTGCCTGTAGTCATGGTGGACTAGTTGAGGAAGGTCGTAGGTTTTTCAACTTGATGAAAAAGGTTTATCAGATTGAGCCAAAGGTAGAACATTATGGGTGCGTAATTGACCTCCTTGGTCGTGCTGGGCTGTTGGATGAAGCAGAGGAACTGATACAAGAGATTCCCAATGAAAATGACGAAATTGTGATTCCACTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCACAACAATGTTGACATGGGGGAAAGAATAGCTAAAAAACTGGTAAACATTCAATCATGTGATTCTAGCATTCACACACTTCTTGCAAATATATACGCTTCTGCTGACAGGTGGGAAGATGCAAAGAAAGTGAGAAAGAAAATGAAAGAACTTGGAGTTAAGAAGATGCCTGGATGTAGTTCAATCGAGGTCGATGGCATTGTTCACGAGTTTCTTGTCGGGGATCCATCTCATCCAGAAATGATAGAAATATGCTCCATGTTGGATAGAGTGGCTGGACCATTACTAGGATCTAAGGAATCTCATCTTGAAAGTGTGATGCCACTTCACATGGACGTCAATATTGCAGTTTGA

Coding sequence (CDS)

ATGGATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATTGGTCTGGAACGGGACAGAGACACCATCAACAAATTGATGGCATTTTGTGCAGACCCATCAGTTGGAAACTTGCACTACGCGGAGAGGATGTTTGATTACGTACATGGCCCATCTCTATTTGTTTATAATGTGATGGTTAAAGCATATGCCAAAAGGGGTATTTTCAGAAAAGACGTGAGGCAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAGACGGGAATGGCTTATGATAATTATGTTTGTAATTCACTTATGGATATGTATGCTGAATTGGGCAAGGTTGAGAATGCTAAGAAGTTGTTTGACGAAATGCCAACTAGAGATTCTATTTCTTGGAATGTTATGATTTCTGGCACTAAAAATCTGGAGCTTGGGGAGGAAATTCACAACTATGTTAGAAAGGAGCTTGGTTTTACCACTATAATCAACAATGCATTGTTAGATATGTATGCAAAATGTGGGTGTTTAAGTATTGCCCGCAAAGTATTTGATGAAATGCTGATGAAAAATGTAATTTGTTGGACAAGCATGATTTCTGGCTATATTAACTGTGGTGATTTGAGAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCTATGATTAATGGGTATGTGCAGTTCAACCATTTTGACGAGGCTGTGGCCTTGTTCCGTGAAATGCAAATTCGAAAGGTTAAACCAGATAAGTTCACGGTGGTCTCTCTTCTTACAGGTTGTGCACAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATATTGATGAGAACAGAATAACAATGGATGCCGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGACGTGTGGATAAATCTTTAGAAATTTTCTATGAGTTACTGGAGAAGGACACATCATCCTGGACATCGATGATTTGCGGTCTCGCCATGAATGGAAAGACTGGTGAAGCACTTAGGTTGTTCTCAGAAATGGAACTTGGGGGAGCTAAACCTGATGATATCACCTTTATTGGTGTTTTAAGTGCCTGTAGTCATGGTGGACTAGTTGAGGAAGGTCGTAGGTTTTTCAACTTGATGAAAAAGGTTTATCAGATTGAGCCAAAGGTAGAACATTATGGGTGCGTAATTGACCTCCTTGGTCGTGCTGGGCTGTTGGATGAAGCAGAGGAACTGATACAAGAGATTCCCAATGAAAATGACGAAATTGTGATTCCACTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCACAACAATGTTGACATGGGGGAAAGAATAGCTAAAAAACTGGTAAACATTCAATCATGTGATTCTAGCATTCACACACTTCTTGCAAATATATACGCTTCTGCTGACAGGTGGGAAGATGCAAAGAAAGTGAGAAAGAAAATGAAAGAACTTGGAGTTAAGAAGATGCCTGGATGTAGTTCAATCGAGGTCGATGGCATTGTTCACGAGTTTCTTGTCGGGGATCCATCTCATCCAGAAATGATAGAAATATGCTCCATGTTGGATAGAGTGGCTGGACCATTACTAGGATCTAAGGAATCTCATCTTGAAAGTGTGATGCCACTTCACATGGACGTCAATATTGCAGTTTGA

Protein sequence

MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVKAYAKRGIFRKDVRQGEKVHGFVVKTGMAYDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISGTKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPLLGSKESHLESVMPLHMDVNIAV

Homology

[Close]

BLAST of Lag0015290 vs. NCBI nr
Match: XP_022960435.1 (pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960436.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960437.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960438.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata])

HSP 1 Score: 978.8 bits (2529), Expect = 2.0e-281
Identity = 488/622 (78.46%), Postives = 517/622 (83.12%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQLKQIQSQIFRIGLERDRDT NKLMAFCADPSVGNL Y ERMFDY+ GPSLFVYNVMV
Sbjct: 55  MDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMV 114

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D R+GEKVHGFVVKTGM 
Sbjct: 115 KAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMV 174

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            D YVCNSLMDMYAELGKV NAKKLFDEMP RDS+SWNV+ISG                 
Sbjct: 175 CDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEM 234

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELG EIHNYVRK+LGFTTIINNALLDMYAKCGCL
Sbjct: 235 QQESNEKPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCL 294

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
            IARK+FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFN
Sbjct: 295 DIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFN 354

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGT
Sbjct: 355 HFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGT 414

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKP
Sbjct: 415 ALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKP 474

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEEL
Sbjct: 475 DDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGQLDEAEEL 534

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           I+EIP+END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A
Sbjct: 535 IREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFA 594

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 553
            RWEDAK+VR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPL
Sbjct: 595 HRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPL 654

[Close]

BLAST of Lag0015290 vs. NCBI nr
Match: KAG6592918.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 977.6 bits (2526), Expect = 4.4e-281
Identity = 487/622 (78.30%), Postives = 517/622 (83.12%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           +DQLKQIQSQIFRIGLERDRDT NKLMAFCADPSVGNL Y ERMFDY+ GPSLFVYNVMV
Sbjct: 48  LDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMV 107

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D R+GEKVHGFVVKTGM 
Sbjct: 108 KAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMV 167

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            D YVCNSLMDMYAELGKV NAKKLFDEMP RDS+SWNV+ISG                 
Sbjct: 168 CDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEM 227

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELG EIHNYVRK+LGFTTIINNALLDMYAKCGCL
Sbjct: 228 QQESNEKPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCL 287

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
            IARK+FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFN
Sbjct: 288 DIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFN 347

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGT
Sbjct: 348 HFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGT 407

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKP
Sbjct: 408 ALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKP 467

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEEL
Sbjct: 468 DDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEEL 527

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           I+EIP+END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A
Sbjct: 528 IREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFA 587

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 553
            RWEDAK+VR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPL
Sbjct: 588 HRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPL 647

[Close]

BLAST of Lag0015290 vs. NCBI nr
Match: KAG7025324.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 975.3 bits (2520), Expect = 2.2e-280
Identity = 486/622 (78.14%), Postives = 516/622 (82.96%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           +DQLKQIQSQIFRIGLERDRDT NKLMAFCADPSVGNL Y ERMFDY+ GPSLFVYNVMV
Sbjct: 55  LDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMV 114

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D R+GEKVHGFVVKTGM 
Sbjct: 115 KAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMV 174

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            D YVCNSLMDMYAELGKV NAKKLFDEMP RDS+SWNV+ISG                 
Sbjct: 175 CDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEM 234

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELG  IHNYVRK+LGFTTIINNALLDMYAKCGCL
Sbjct: 235 QQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCL 294

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
            IARK+FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFN
Sbjct: 295 DIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFN 354

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGT
Sbjct: 355 HFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGT 414

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKP
Sbjct: 415 ALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKP 474

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEEL
Sbjct: 475 DDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEEL 534

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           I+EIP+END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A
Sbjct: 535 IREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFA 594

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 553
            RWEDAK+VR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPL
Sbjct: 595 HRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPL 654

[Close]

BLAST of Lag0015290 vs. NCBI nr
Match: XP_038880251.1 (pentatricopeptide repeat-containing protein At1g31430 [Benincasa hispida] >XP_038880252.1 pentatricopeptide repeat-containing protein At1g31430 [Benincasa hispida] >XP_038880253.1 pentatricopeptide repeat-containing protein At1g31430 [Benincasa hispida] >XP_038880254.1 pentatricopeptide repeat-containing protein At1g31430 [Benincasa hispida])

HSP 1 Score: 974.5 bits (2518), Expect = 3.7e-280
Identity = 487/617 (78.93%), Postives = 517/617 (83.79%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQLKQIQSQIFRIGLE D+DTI+K M FCAD S+GNLHYAERMFDY+  PSL VYNVMV
Sbjct: 48  MDQLKQIQSQIFRIGLEGDQDTIDKFMTFCADSSLGNLHYAERMFDYIQEPSLLVYNVMV 107

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           K YAKRGIF K                               DVRQGEKVHGFVVKTGM 
Sbjct: 108 KVYAKRGIFSKVILLFQQLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMD 167

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
           +DNYVCNSLMDMY++LG VENAKKLFD+M TRDS+SWNVMISG                 
Sbjct: 168 FDNYVCNSLMDMYSKLGNVENAKKLFDKMTTRDSVSWNVMISGYVRCRRFEDAIGTFREM 227

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELGEEIH+YVRKELGFTTIINNALLDMYAKCGCL
Sbjct: 228 QQESNEKPNEATVVSTLSACIALKNLELGEEIHDYVRKELGFTTIINNALLDMYAKCGCL 287

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
           +IAR +FDEM +KNVICWTSMISGYINCGDLREARDLFDRSPV+DVVLWTAMINGYVQF+
Sbjct: 288 NIARNIFDEMPVKNVICWTSMISGYINCGDLREARDLFDRSPVKDVVLWTAMINGYVQFH 347

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQIR+VKPDKFTVV+LLTGCAQLGALEQGKWIHGY+DENRITMD VVGT
Sbjct: 348 HFDEAVALFREMQIRRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 407

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L  KDT+SWTS+ICGLAMNGKTGEALRLFSEME  GAKP
Sbjct: 408 ALIEMYSKCGCVDKSLEIFYKLKNKDTASWTSIICGLAMNGKTGEALRLFSEMEFVGAKP 467

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGR FFNLMKKVY+IEPKVEHYGCVIDLLGRAGLLDEAEEL
Sbjct: 468 DDITFIGVLSACSHGGLVEEGRMFFNLMKKVYRIEPKVEHYGCVIDLLGRAGLLDEAEEL 527

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           IQ IPNEN EIV+PLYGALLSAC+IHNNVDMGER+AKKLV+I+SCDSSIHTLLA+IYAS 
Sbjct: 528 IQGIPNENGEIVVPLYGALLSACKIHNNVDMGERLAKKLVSIESCDSSIHTLLASIYASV 587

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 548
           DRWEDAKKVR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLD VAG L
Sbjct: 588 DRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDIVAGQL 647

[Close]

BLAST of Lag0015290 vs. NCBI nr
Match: XP_023004947.1 (pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004948.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004949.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004950.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima])

HSP 1 Score: 973.0 bits (2514), Expect = 1.1e-279
Identity = 485/622 (77.97%), Postives = 515/622 (82.80%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQLKQIQSQIFRIGL+RDRDT NKLMAFCADPSVGNLHY ERMFDY+ GPSLFVYNVMV
Sbjct: 55  MDQLKQIQSQIFRIGLDRDRDTTNKLMAFCADPSVGNLHYTERMFDYIQGPSLFVYNVMV 114

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D R+GEKVHGFVVKTGM 
Sbjct: 115 KAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMV 174

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            D YVCNSLMDMYAELGKV NAKKLFDEMP RDS+SWNV+ISG                 
Sbjct: 175 CDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEM 234

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNL LG EIHNYVRKELGFTTIINNALLDMYAKCGCL
Sbjct: 235 QQESNEKPGEATVVSTLSACTALKNLALGVEIHNYVRKELGFTTIINNALLDMYAKCGCL 294

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
            IARK+FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFN
Sbjct: 295 DIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFN 354

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGT
Sbjct: 355 HFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGT 414

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L EKDT+SWTSMICGLAMNG+TGEAL+LF+EMEL GAKP
Sbjct: 415 ALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALKLFTEMELEGAKP 474

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRR+F+ MK VY+IEPKVEHYGC IDLLGRAG LDEAEEL
Sbjct: 475 DDITFIGVLSACSHGGLVEEGRRYFDSMKTVYRIEPKVEHYGCAIDLLGRAGRLDEAEEL 534

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           I+EIP+END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A
Sbjct: 535 IREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFA 594

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 553
            RWEDAK+VR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPL
Sbjct: 595 HRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPL 654

[Close]

BLAST of Lag0015290 vs. ExPASy Swiss-Prot
Match: Q9C866 (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E55 PE=2 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 1.6e-164
Identity = 290/539 (53.80%), Postives = 376/539 (69.76%), Query Frame = 0


Query: 44  MFDYVHGPSLFVYNVMVKAYAKR-GIFRKDVRQGEKVHGFVVKTGMAYDNYVCNSLMDMY 103
           +F  + G  L+  N  +    K  G  RK V +GEKVHG+ VK G+ +D+YV NSLM MY
Sbjct: 33  LFGELRGQGLYPDNFTLPVVLKSIGRLRK-VIEGEKVHGYAVKAGLEFDSYVSNSLMGMY 92

Query: 104 AELGKVENAKKLFDEMPTRDSISWNVMIS----------------------------GT- 163
           A LGK+E   K+FDEMP RD +SWN +IS                            GT 
Sbjct: 93  ASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTI 152

Query: 164 ----------KNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDEMLMK 223
                     KNLE+GE I+ +V  E   +  I NAL+DM+ KCGCL  AR VFD M  K
Sbjct: 153 VSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 212

Query: 224 NVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 283
           NV CWTSM+ GY++ G + EAR LF+RSPV+DVVLWTAM+NGYVQFN FDEA+ LFR MQ
Sbjct: 213 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 272

Query: 284 IRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKCGRVD 343
              ++PD F +VSLLTGCAQ GALEQGKWIHGYI+ENR+T+D VVGTAL++MY+KCG ++
Sbjct: 273 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIE 332

Query: 344 KSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVLSACS 403
            +LE+FYE+ E+DT+SWTS+I GLAMNG +G AL L+ EME  G + D ITF+ VL+AC+
Sbjct: 333 TALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACN 392

Query: 404 HGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDEIVI 463
           HGG V EGR+ F+ M + + ++PK EH  C+IDLL RAGLLDEAEELI ++  E+DE ++
Sbjct: 393 HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLV 452

Query: 464 PLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKVRKKM 523
           P+Y +LLSA R + NV + ER+A+KL  ++  DSS HTLLA++YASA+RWED   VR+KM
Sbjct: 453 PVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKM 512

Query: 524 KELGVKKMPGCSSIEVDGIVHEFLVGDP--SHPEMIEICSMLDRVAGPLLGSKESHLES 541
           K+LG++K PGCSSIE+DG+ HEF+VGD   SHP+M EI SML +    +L  +   ++S
Sbjct: 513 KDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLDLEHKEIDS 570

[Close]

BLAST of Lag0015290 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 8.7e-123
Identity = 226/593 (38.11%), Postives = 354/593 (59.70%), Query Frame = 0


Query: 4   LKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVKAY 63
           LKQIQ+Q+   GL  D    ++L+AFCA      L Y+ ++   +  P++F +NV ++ +
Sbjct: 69  LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128

Query: 64  AKRG-------IFRKDVRQ---------------------------GEKVHGFVVKTGMA 123
           ++         ++++ +R                            G  + G V+K  + 
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188

Query: 124 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISGTK--------------- 183
             ++V N+ + M+A  G +ENA+K+FDE P RD +SWN +I+G K               
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248

Query: 184 -----------------------NLELGEEIHNYVRKE-LGFTTIINNALLDMYAKCGCL 243
                                  +L  G+E + YV++  L  T  + NAL+DM++KCG +
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308

Query: 244 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 303
             AR++FD +  + ++ WT+MISGY  CG L  +R LFD    +DVVLW AMI G VQ  
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368

Query: 304 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 363
              +A+ALF+EMQ    KPD+ T++  L+ C+QLGAL+ G WIH YI++  ++++  +GT
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428

Query: 364 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 423
           +L++MY+KCG + ++L +F+ +  +++ ++T++I GLA++G    A+  F+EM   G  P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488

Query: 424 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 483
           D+ITFIG+LSAC HGG+++ GR +F+ MK  + + P+++HY  ++DLLGRAGLL+EA+ L
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548

Query: 484 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 524
           ++ +P E D  V   +GALL  CR+H NV++GE+ AKKL+ +   DS I+ LL  +Y  A
Sbjct: 549 MESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEA 608

[Close]

BLAST of Lag0015290 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 430.6 bits (1106), Expect = 2.6e-119
Identity = 225/597 (37.69%), Postives = 353/597 (59.13%), Query Frame = 0


Query: 2   DQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVK 61
           DQ KQ+ SQ    G+  +     KL  F      G++ YA ++F  +  P + V+N M+K
Sbjct: 48  DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIK 107

Query: 62  AYAKRGIFRKDVRQ--------------------------------GEKVHGFVVKTGMA 121
            ++K     + VR                                 G+K+H  VVK G+ 
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLG 167

Query: 122 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 181
            + YV N+L+ MY+  G ++ A+ +FD     D  SWN+MISG                 
Sbjct: 168 SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227

Query: 182 ---------------------TKNLELGEEIHNYVRK-ELGFTTIINNALLDMYAKCGCL 241
                                 K+ +L + +H YV + +   +  + NAL++ YA CG +
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287

Query: 242 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 301
            IA ++F  M  ++VI WTS++ GY+  G+L+ AR  FD+ PVRD + WT MI+GY++  
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347

Query: 302 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 361
            F+E++ +FREMQ   + PD+FT+VS+LT CA LG+LE G+WI  YID+N+I  D VVG 
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407

Query: 362 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 421
           ALI+MY KCG  +K+ ++F+++ ++D  +WT+M+ GLA NG+  EA+++F +M+    +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467

Query: 422 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 481
           DDIT++GVLSAC+H G+V++ R+FF  M+  ++IEP + HYGC++D+LGRAGL+ EA E+
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527

Query: 482 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 528
           ++++P   + IV   +GALL A R+HN+  M E  AKK++ ++  + +++ LL NIYA  
Sbjct: 528 LRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 587

[Close]

BLAST of Lag0015290 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 9.9e-111
Identity = 210/596 (35.23%), Postives = 330/596 (55.37%), Query Frame = 0


Query: 3   QLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVKA 62
           QLKQ    + R G   D  + +KL A  A  S  +L YA ++FD +  P+ F +N +++A
Sbjct: 45  QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104

Query: 63  YA--------------------------------KRGIFRKDVRQGEKVHGFVVKTGMAY 122
           YA                                K       +  G+ +HG  VK+ +  
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164

Query: 123 DNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG------------------ 182
           D +V NSL+  Y   G +++A K+F  +  +D +SWN MI+G                  
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224

Query: 183 --------------------TKNLELGEEIHNYVRK-ELGFTTIINNALLDMYAKCGCLS 242
                                +NLE G ++ +Y+ +  +     + NA+LDMY KCG + 
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284

Query: 243 IARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNH 302
            A+++FD M  K+ + WT+M+ GY    D   AR++ +  P +D+V W A+I+ Y Q   
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344

Query: 303 FDEAVALFREMQIRK-VKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 362
            +EA+ +F E+Q++K +K ++ T+VS L+ CAQ+GALE G+WIH YI ++ I M+  V +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404

Query: 363 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 422
           ALI MYSKCG ++KS E+F  + ++D   W++MI GLAM+G   EA+ +F +M+    KP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464

Query: 423 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 482
           + +TF  V  ACSH GLV+E    F+ M+  Y I P+ +HY C++D+LGR+G L++A + 
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524

Query: 483 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 527
           I+ +P      V   +GALL AC+IH N+++ E    +L+ ++  +   H LL+NIYA  
Sbjct: 525 IEAMPIPPSTSV---WGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 584

[Close]

BLAST of Lag0015290 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.4e-109
Identity = 217/604 (35.93%), Postives = 330/604 (54.64%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFC-ADPSVGNLHYAERMFDYVHGPSLFVYNVM 60
           +  L+ I +Q+ +IGL      ++KL+ FC   P    L YA  +F  +  P+L ++N M
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  VKAYA-------------------------------KRGIFRKDVRQGEKVHGFVVKTGM 120
            + +A                               K     K  ++G+++HG V+K G 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 AYDNYVCNSLMDMYAELGK-------------------------------VENAKKLFDE 180
             D YV  SL+ MY + G+                               +ENA+KLFDE
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225

Query: 181 MPTRDSISWNVMISG---TKNLELGEEIHNYVRK------ELGFTTIINNALLDMYAKCG 240
           +P +D +SWN MISG   T N +   E+   + K      E    T+++       A+ G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC-----AQSG 285

Query: 241 CLSIARKVF----DEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMIN 300
            + + R+V     D     N+    ++I  Y  CG+L  A  LF+R P +DV+ W  +I 
Sbjct: 286 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 345

Query: 301 GYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDE--NRI 360
           GY   N + EA+ LF+EM      P+  T++S+L  CA LGA++ G+WIH YID+    +
Sbjct: 346 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 405

Query: 361 TMDAVVGTALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSE 420
           T  + + T+LI+MY+KCG ++ + ++F  +L K  SSW +MI G AM+G+   +  LFS 
Sbjct: 406 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 465

Query: 421 MELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAG 480
           M   G +PDDITF+G+LSACSH G+++ GR  F  M + Y++ PK+EHYGC+IDLLG +G
Sbjct: 466 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 525

Query: 481 LLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTL 527
           L  EAEE+I  +  E D ++   + +LL AC++H NV++GE  A+ L+ I+  +   + L
Sbjct: 526 LFKEAEEMINMMEMEPDGVI---WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 585

[Close]

BLAST of Lag0015290 vs. ExPASy TrEMBL
Match: A0A6J1H7E9 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita moschata OX=3662 GN=LOC111461170 PE=4 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 9.5e-282
Identity = 488/622 (78.46%), Postives = 517/622 (83.12%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQLKQIQSQIFRIGLERDRDT NKLMAFCADPSVGNL Y ERMFDY+ GPSLFVYNVMV
Sbjct: 55  MDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMV 114

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D R+GEKVHGFVVKTGM 
Sbjct: 115 KAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMV 174

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            D YVCNSLMDMYAELGKV NAKKLFDEMP RDS+SWNV+ISG                 
Sbjct: 175 CDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEM 234

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELG EIHNYVRK+LGFTTIINNALLDMYAKCGCL
Sbjct: 235 QQESNEKPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCL 294

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
            IARK+FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFN
Sbjct: 295 DIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFN 354

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGT
Sbjct: 355 HFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGT 414

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKP
Sbjct: 415 ALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKP 474

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEEL
Sbjct: 475 DDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGQLDEAEEL 534

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           I+EIP+END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A
Sbjct: 535 IREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFA 594

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 553
            RWEDAK+VR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPL
Sbjct: 595 HRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPL 654

[Close]

BLAST of Lag0015290 vs. ExPASy TrEMBL
Match: A0A6J1KW17 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita maxima OX=3661 GN=LOC111498101 PE=4 SV=1)

HSP 1 Score: 973.0 bits (2514), Expect = 5.2e-280
Identity = 485/622 (77.97%), Postives = 515/622 (82.80%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQLKQIQSQIFRIGL+RDRDT NKLMAFCADPSVGNLHY ERMFDY+ GPSLFVYNVMV
Sbjct: 55  MDQLKQIQSQIFRIGLDRDRDTTNKLMAFCADPSVGNLHYTERMFDYIQGPSLFVYNVMV 114

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D R+GEKVHGFVVKTGM 
Sbjct: 115 KAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMV 174

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            D YVCNSLMDMYAELGKV NAKKLFDEMP RDS+SWNV+ISG                 
Sbjct: 175 CDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEM 234

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNL LG EIHNYVRKELGFTTIINNALLDMYAKCGCL
Sbjct: 235 QQESNEKPGEATVVSTLSACTALKNLALGVEIHNYVRKELGFTTIINNALLDMYAKCGCL 294

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
            IARK+FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFN
Sbjct: 295 DIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFN 354

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGT
Sbjct: 355 HFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGT 414

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFY+L EKDT+SWTSMICGLAMNG+TGEAL+LF+EMEL GAKP
Sbjct: 415 ALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALKLFTEMELEGAKP 474

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRR+F+ MK VY+IEPKVEHYGC IDLLGRAG LDEAEEL
Sbjct: 475 DDITFIGVLSACSHGGLVEEGRRYFDSMKTVYRIEPKVEHYGCAIDLLGRAGRLDEAEEL 534

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           I+EIP+END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A
Sbjct: 535 IREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFA 594

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 553
            RWEDAK+VR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPL
Sbjct: 595 HRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPL 654

[Close]

BLAST of Lag0015290 vs. ExPASy TrEMBL
Match: A0A6J1CTE5 (pentatricopeptide repeat-containing protein At1g31430 OS=Momordica charantia OX=3673 GN=LOC111014415 PE=4 SV=1)

HSP 1 Score: 972.2 bits (2512), Expect = 8.9e-280
Identity = 486/619 (78.51%), Postives = 520/619 (84.01%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQ KQIQ+ IFRIGLE+DRDT+NK MAFCADPS+GNL YAER+FDY+  P LFVYNVMV
Sbjct: 48  MDQFKQIQTHIFRIGLEQDRDTLNKSMAFCADPSLGNLRYAERVFDYIQEPCLFVYNVMV 107

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           KAYAKRGIFRK                               D+  GEK+HGFVVKTGM 
Sbjct: 108 KAYAKRGIFRKVILLFQRLKEDGLWPDNFTYPFVLKAIGCLRDLCHGEKIHGFVVKTGMD 167

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
           +DNYVCNSLMDMYAELGK+E A+KLFDEM T+DS+SWNV+ISG                 
Sbjct: 168 FDNYVCNSLMDMYAELGKIEYAEKLFDEMHTKDSVSWNVLISGYVRCRRFEDAINTFKEM 227

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELGEEIHNYVR ELGFTTIINNALLDMYAKCG L
Sbjct: 228 QRESNVKPGEAGIVSTLSACTALKNLELGEEIHNYVRNELGFTTIINNALLDMYAKCGRL 287

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
           +IARKVFDEM MKNVICWTSMISGYINCGDL+EARDLFD SPVRDVVLWTAMINGYVQFN
Sbjct: 288 NIARKVFDEMPMKNVICWTSMISGYINCGDLKEARDLFDISPVRDVVLWTAMINGYVQFN 347

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFDEAVALFR+MQI+KVKPDKFTVV+LLTGCAQLGALEQGKW+HGY+DENRITMDAVVGT
Sbjct: 348 HFDEAVALFRKMQIQKVKPDKFTVVALLTGCAQLGALEQGKWMHGYLDENRITMDAVVGT 407

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG V+KSLEIFYEL EKDT+SWTS+ICGLAMNGKTGEALRLFSEMEL GAKP
Sbjct: 408 ALIEMYSKCGCVNKSLEIFYELEEKDTASWTSIICGLAMNGKTGEALRLFSEMELVGAKP 467

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRRFFNLMKKVY+IEPKVEHYGCVIDLLGRAGLLDEAEEL
Sbjct: 468 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYRIEPKVEHYGCVIDLLGRAGLLDEAEEL 527

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           IQEIPNEND+I++PLYGALLSACRIHNNVDMGER++KKLVN +SCDSSIHTLLANIYASA
Sbjct: 528 IQEIPNENDQILVPLYGALLSACRIHNNVDMGERLSKKLVNFESCDSSIHTLLANIYASA 587

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 548
           DRWEDAKKVR+KMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRV GPL
Sbjct: 588 DRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVTGPL 647

[Close]

BLAST of Lag0015290 vs. ExPASy TrEMBL
Match: A0A0A0LWP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418260 PE=4 SV=1)

HSP 1 Score: 953.0 bits (2462), Expect = 5.6e-274
Identity = 480/617 (77.80%), Postives = 511/617 (82.82%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           MDQLKQIQSQIFRIGLE DRDTINKLMAFCAD S+GNL YAE++F+YV  PSLFVYNVMV
Sbjct: 186 MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV 245

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           K YAKRGI RK                               DVRQGEKV GF+VKTGM 
Sbjct: 246 KMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD 305

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            DNYV NSL+DMY EL  VENAKKLFDEM TRDS+SWNVMISG                 
Sbjct: 306 LDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREM 365

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELG+EIHNYVRKELGFTT I+NALLDMYAKCGCL
Sbjct: 366 QQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCL 425

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
           +IAR +FDEM MKNVICWTSMISGYINCGDLREARDLFD+SPVRDVVLWTAMINGYVQF+
Sbjct: 426 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 485

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFD+AVALFREMQI++VKPDKFTVV+LLTGCAQLGALEQGKWIHGY+DENRITMD VVGT
Sbjct: 486 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 545

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFYEL +KDT+SWTS+ICGLAMNGKT EALRLFSEME  GAKP
Sbjct: 546 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 605

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRRFFN MKKV++IEPKVEHYGCVIDLLGRAGLLDEAEEL
Sbjct: 606 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 665

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           IQEIP EN EIV+PLYGALLSACRIHNNVDMGER+AKKL NI+SCDSSIHTLLANIYAS 
Sbjct: 666 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 725

Query: 541 DRWEDAKKVRKKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVAGPL 548
           DRWEDAKKVR+KMKELGVKKMPGCS IEVDGIVHEFLVGDPSHPEM+EICSML+RV G L
Sbjct: 726 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 785

[Close]

BLAST of Lag0015290 vs. ExPASy TrEMBL
Match: A0A1S3CPD2 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucumis melo OX=3656 GN=LOC103502722 PE=4 SV=1)

HSP 1 Score: 932.2 bits (2408), Expect = 1.0e-267
Identity = 471/610 (77.21%), Postives = 503/610 (82.46%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMV 60
           M+QLK+IQSQIFRIGLE DRD INKLMAFCAD S+GNL YAE++FDYV  PSLFVYNVMV
Sbjct: 48  MEQLKRIQSQIFRIGLEGDRDIINKLMAFCADLSLGNLRYAEKIFDYVQDPSLFVYNVMV 107

Query: 61  KAYAKRGIFRK-------------------------------DVRQGEKVHGFVVKTGMA 120
           K YAKRG+ RK                               DV QGEK+HGFVVKTGM 
Sbjct: 108 KMYAKRGLLRKVLLLFQQLREDQLWPDNFTYPFVLKAIGCLRDVGQGEKLHGFVVKTGMN 167

Query: 121 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 180
            DNYVCNSLMDMY+ELG VENAKKLFDEM TRDS+SWNVMISG                 
Sbjct: 168 LDNYVCNSLMDMYSELGNVENAKKLFDEMTTRDSVSWNVMISGYVGCRRFEDAINTFREM 227

Query: 181 ----------------------TKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCL 240
                                  KNLELG+EIHNYVRKELGFT  I+NALLDMYAKCGCL
Sbjct: 228 QQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTPRIDNALLDMYAKCGCL 287

Query: 241 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 300
           +I+R +FDEM MKNVICWTSMISGYINCGDLREARDLFD+SPVRDVVLWTAMINGYVQF+
Sbjct: 288 NISRNIFDEMPMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 347

Query: 301 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 360
           HFD+AVALFREMQI+KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+DENRIT+D VVGT
Sbjct: 348 HFDDAVALFREMQIQKVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITIDVVVGT 407

Query: 361 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 420
           ALIEMYSKCG VDKSLEIFYEL +KDT+SWTS+ICGLAMNGKT EALRLFSEMEL GAKP
Sbjct: 408 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMELVGAKP 467

Query: 421 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 480
           DDITFIGVLSACSHGGLVEEGRRFFN MKKVY+IEPKVEHYGCV+DLLGRAGLLDEAEEL
Sbjct: 468 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVYRIEPKVEHYGCVVDLLGRAGLLDEAEEL 527

Query: 481 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 540
           IQEI  EN EIV+ LYGALLSACRIHNNVDMGER+AKKLVNI+ CDSSIH LLANIYASA
Sbjct: 528 IQEISIENCEIVVSLYGALLSACRIHNNVDMGERLAKKLVNIEPCDSSIHALLANIYASA 587

[Close]

BLAST of Lag0015290 vs. TAIR 10
Match: AT1G31430.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 580.9 bits (1496), Expect = 1.1e-165
Identity = 290/539 (53.80%), Postives = 376/539 (69.76%), Query Frame = 0


Query: 44  MFDYVHGPSLFVYNVMVKAYAKR-GIFRKDVRQGEKVHGFVVKTGMAYDNYVCNSLMDMY 103
           +F  + G  L+  N  +    K  G  RK V +GEKVHG+ VK G+ +D+YV NSLM MY
Sbjct: 33  LFGELRGQGLYPDNFTLPVVLKSIGRLRK-VIEGEKVHGYAVKAGLEFDSYVSNSLMGMY 92

Query: 104 AELGKVENAKKLFDEMPTRDSISWNVMIS----------------------------GT- 163
           A LGK+E   K+FDEMP RD +SWN +IS                            GT 
Sbjct: 93  ASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTI 152

Query: 164 ----------KNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDEMLMK 223
                     KNLE+GE I+ +V  E   +  I NAL+DM+ KCGCL  AR VFD M  K
Sbjct: 153 VSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 212

Query: 224 NVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 283
           NV CWTSM+ GY++ G + EAR LF+RSPV+DVVLWTAM+NGYVQFN FDEA+ LFR MQ
Sbjct: 213 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 272

Query: 284 IRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKCGRVD 343
              ++PD F +VSLLTGCAQ GALEQGKWIHGYI+ENR+T+D VVGTAL++MY+KCG ++
Sbjct: 273 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIE 332

Query: 344 KSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVLSACS 403
            +LE+FYE+ E+DT+SWTS+I GLAMNG +G AL L+ EME  G + D ITF+ VL+AC+
Sbjct: 333 TALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACN 392

Query: 404 HGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDEIVI 463
           HGG V EGR+ F+ M + + ++PK EH  C+IDLL RAGLLDEAEELI ++  E+DE ++
Sbjct: 393 HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLV 452

Query: 464 PLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKVRKKM 523
           P+Y +LLSA R + NV + ER+A+KL  ++  DSS HTLLA++YASA+RWED   VR+KM
Sbjct: 453 PVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKM 512

Query: 524 KELGVKKMPGCSSIEVDGIVHEFLVGDP--SHPEMIEICSMLDRVAGPLLGSKESHLES 541
           K+LG++K PGCSSIE+DG+ HEF+VGD   SHP+M EI SML +    +L  +   ++S
Sbjct: 513 KDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLDLEHKEIDS 570

[Close]

BLAST of Lag0015290 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 442.2 bits (1136), Expect = 6.1e-124
Identity = 226/593 (38.11%), Postives = 354/593 (59.70%), Query Frame = 0


Query: 4   LKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVKAY 63
           LKQIQ+Q+   GL  D    ++L+AFCA      L Y+ ++   +  P++F +NV ++ +
Sbjct: 69  LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128

Query: 64  AKRG-------IFRKDVRQ---------------------------GEKVHGFVVKTGMA 123
           ++         ++++ +R                            G  + G V+K  + 
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188

Query: 124 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISGTK--------------- 183
             ++V N+ + M+A  G +ENA+K+FDE P RD +SWN +I+G K               
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248

Query: 184 -----------------------NLELGEEIHNYVRKE-LGFTTIINNALLDMYAKCGCL 243
                                  +L  G+E + YV++  L  T  + NAL+DM++KCG +
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308

Query: 244 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 303
             AR++FD +  + ++ WT+MISGY  CG L  +R LFD    +DVVLW AMI G VQ  
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368

Query: 304 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 363
              +A+ALF+EMQ    KPD+ T++  L+ C+QLGAL+ G WIH YI++  ++++  +GT
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428

Query: 364 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 423
           +L++MY+KCG + ++L +F+ +  +++ ++T++I GLA++G    A+  F+EM   G  P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488

Query: 424 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 483
           D+ITFIG+LSAC HGG+++ GR +F+ MK  + + P+++HY  ++DLLGRAGLL+EA+ L
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548

Query: 484 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 524
           ++ +P E D  V   +GALL  CR+H NV++GE+ AKKL+ +   DS I+ LL  +Y  A
Sbjct: 549 MESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEA 608

[Close]

BLAST of Lag0015290 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.9e-120
Identity = 225/597 (37.69%), Postives = 353/597 (59.13%), Query Frame = 0


Query: 2   DQLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVK 61
           DQ KQ+ SQ    G+  +     KL  F      G++ YA ++F  +  P + V+N M+K
Sbjct: 48  DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIK 107

Query: 62  AYAKRGIFRKDVRQ--------------------------------GEKVHGFVVKTGMA 121
            ++K     + VR                                 G+K+H  VVK G+ 
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLG 167

Query: 122 YDNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG----------------- 181
            + YV N+L+ MY+  G ++ A+ +FD     D  SWN+MISG                 
Sbjct: 168 SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227

Query: 182 ---------------------TKNLELGEEIHNYVRK-ELGFTTIINNALLDMYAKCGCL 241
                                 K+ +L + +H YV + +   +  + NAL++ YA CG +
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287

Query: 242 SIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFN 301
            IA ++F  M  ++VI WTS++ GY+  G+L+ AR  FD+ PVRD + WT MI+GY++  
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347

Query: 302 HFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 361
            F+E++ +FREMQ   + PD+FT+VS+LT CA LG+LE G+WI  YID+N+I  D VVG 
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407

Query: 362 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 421
           ALI+MY KCG  +K+ ++F+++ ++D  +WT+M+ GLA NG+  EA+++F +M+    +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467

Query: 422 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 481
           DDIT++GVLSAC+H G+V++ R+FF  M+  ++IEP + HYGC++D+LGRAGL+ EA E+
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527

Query: 482 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 528
           ++++P   + IV   +GALL A R+HN+  M E  AKK++ ++  + +++ LL NIYA  
Sbjct: 528 LRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 587

[Close]

BLAST of Lag0015290 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 402.1 bits (1032), Expect = 7.1e-112
Identity = 210/596 (35.23%), Postives = 330/596 (55.37%), Query Frame = 0


Query: 3   QLKQIQSQIFRIGLERDRDTINKLMAFCADPSVGNLHYAERMFDYVHGPSLFVYNVMVKA 62
           QLKQ    + R G   D  + +KL A  A  S  +L YA ++FD +  P+ F +N +++A
Sbjct: 45  QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104

Query: 63  YA--------------------------------KRGIFRKDVRQGEKVHGFVVKTGMAY 122
           YA                                K       +  G+ +HG  VK+ +  
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164

Query: 123 DNYVCNSLMDMYAELGKVENAKKLFDEMPTRDSISWNVMISG------------------ 182
           D +V NSL+  Y   G +++A K+F  +  +D +SWN MI+G                  
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224

Query: 183 --------------------TKNLELGEEIHNYVRK-ELGFTTIINNALLDMYAKCGCLS 242
                                +NLE G ++ +Y+ +  +     + NA+LDMY KCG + 
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284

Query: 243 IARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNH 302
            A+++FD M  K+ + WT+M+ GY    D   AR++ +  P +D+V W A+I+ Y Q   
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344

Query: 303 FDEAVALFREMQIRK-VKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGT 362
            +EA+ +F E+Q++K +K ++ T+VS L+ CAQ+GALE G+WIH YI ++ I M+  V +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404

Query: 363 ALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKP 422
           ALI MYSKCG ++KS E+F  + ++D   W++MI GLAM+G   EA+ +F +M+    KP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464

Query: 423 DDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEEL 482
           + +TF  V  ACSH GLV+E    F+ M+  Y I P+ +HY C++D+LGR+G L++A + 
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524

Query: 483 IQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASA 527
           I+ +P      V   +GALL AC+IH N+++ E    +L+ ++  +   H LL+NIYA  
Sbjct: 525 IEAMPIPPSTSV---WGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 584

[Close]

BLAST of Lag0015290 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-110
Identity = 217/604 (35.93%), Postives = 330/604 (54.64%), Query Frame = 0


Query: 1   MDQLKQIQSQIFRIGLERDRDTINKLMAFC-ADPSVGNLHYAERMFDYVHGPSLFVYNVM 60
           +  L+ I +Q+ +IGL      ++KL+ FC   P    L YA  +F  +  P+L ++N M
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  VKAYA-------------------------------KRGIFRKDVRQGEKVHGFVVKTGM 120
            + +A                               K     K  ++G+++HG V+K G 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 AYDNYVCNSLMDMYAELGK-------------------------------VENAKKLFDE 180
             D YV  SL+ MY + G+                               +ENA+KLFDE
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225

Query: 181 MPTRDSISWNVMISG---TKNLELGEEIHNYVRK------ELGFTTIINNALLDMYAKCG 240
           +P +D +SWN MISG   T N +   E+   + K      E    T+++       A+ G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC-----AQSG 285

Query: 241 CLSIARKVF----DEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMIN 300
            + + R+V     D     N+    ++I  Y  CG+L  A  LF+R P +DV+ W  +I 
Sbjct: 286 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 345

Query: 301 GYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDE--NRI 360
           GY   N + EA+ LF+EM      P+  T++S+L  CA LGA++ G+WIH YID+    +
Sbjct: 346 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 405

Query: 361 TMDAVVGTALIEMYSKCGRVDKSLEIFYELLEKDTSSWTSMICGLAMNGKTGEALRLFSE 420
           T  + + T+LI+MY+KCG ++ + ++F  +L K  SSW +MI G AM+G+   +  LFS 
Sbjct: 406 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 465

Query: 421 MELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAG 480
           M   G +PDDITF+G+LSACSH G+++ GR  F  M + Y++ PK+EHYGC+IDLLG +G
Sbjct: 466 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 525

Query: 481 LLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTL 527
           L  EAEE+I  +  E D ++   + +LL AC++H NV++GE  A+ L+ I+  +   + L
Sbjct: 526 LFKEAEEMINMMEMEPDGVI---WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 585

The following BLAST results are available for this feature:

BLAST of Lag0015290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960435.1	2.0e-281	78.46	pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_0...	[more]
KAG6592918.1	4.4e-281	78.30	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7025324.1	2.2e-280	78.14	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_038880251.1	3.7e-280	78.93	pentatricopeptide repeat-containing protein At1g31430 [Benincasa hispida] >XP_03...	[more]
XP_023004947.1	1.1e-279	77.97	pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023...	[more]

BLAST of Lag0015290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C866	1.6e-164	53.80	Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	8.7e-123	38.11	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9LSB8	2.6e-119	37.69	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]
O82380	9.9e-111	35.23	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LN01	1.4e-109	35.93	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]

BLAST of Lag0015290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7E9	9.5e-282	78.46	pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KW17	5.2e-280	77.97	pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita maxima OX=366...	[more]
A0A6J1CTE5	8.9e-280	78.51	pentatricopeptide repeat-containing protein At1g31430 OS=Momordica charantia OX=...	[more]
A0A0A0LWP8	5.6e-274	77.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418260 PE=4 SV=1	[more]
A0A1S3CPD2	1.0e-267	77.21	pentatricopeptide repeat-containing protein At1g31430 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Lag0015290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31430.1	1.1e-165	53.80	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G22410.1	6.1e-124	38.11	SLOW GROWTH 1	[more]
AT3G15930.1	1.9e-120	37.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	7.1e-112	35.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	1.0e-110	35.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 400..420
None	No IPR available	PANTHER	PTHR47928:SF123	OS06G0597500 PROTEIN	coord: 71..132
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 71..132
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..67
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 133..530
None	No IPR available	PANTHER	PTHR47928:SF123	OS06G0597500 PROTEIN	coord: 1..67
None	No IPR available	PANTHER	PTHR47928:SF123	OS06G0597500 PROTEIN	coord: 133..530
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 94..121 e-value: 1.6E-5 score: 24.8 coord: 390..415 e-value: 0.0028 score: 17.8 coord: 461..488 e-value: 0.011 score: 16.0 coord: 158..185 e-value: 5.2E-4 score: 20.1 coord: 187..210 e-value: 1.5E-5 score: 24.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 214..262 e-value: 1.0E-13 score: 51.2 coord: 315..363 e-value: 1.2E-9 score: 38.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 186..210 e-value: 1.4E-4 score: 19.8 coord: 319..351 e-value: 6.2E-7 score: 27.2 coord: 217..250 e-value: 2.6E-8 score: 31.5 coord: 93..125 e-value: 8.8E-6 score: 23.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 184..214 score: 8.845827
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 316..350 score: 11.673842
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 91..125 score: 10.183105
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..249 score: 12.24383
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 456..490 score: 9.229472
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..315 score: 8.6266
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 34..183 e-value: 2.3E-22 score: 81.8 coord: 290..501 e-value: 8.3E-42 score: 145.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 210..287 e-value: 1.7E-14 score: 55.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 64..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015290.1	Lag0015290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000228	nuclear chromosome
cellular_component	GO:0070603	SWI/SNF superfamily-type complex
molecular_function	GO:0005515	protein binding