
Lag0015263 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGAGATGATGATGAATGGGAGCTGCAAAAAGGGAGGTGGAGCTCCATCGCCTTGCGCTGCGTGCAAGCTTCTGCGGCGGCGGTGCGCTCAGGACTGCGTTTTTGCGCCTTATTTTCCTGCTGATCAGCCTCACAAATTCTCCAGTGTTCACAAGGTCTTTGGAGCTAGTAATGTCAGCAAATTGTTGCAGGTTTTAATCAATTCTCTCTTTACCTTCCCCATTTATCCCTTAATTTTTCTGTTTCACTTTCCCACTATGTGGAGTGGAGAATCGAATCTTTGAATGTTTATAAAACGACGAGTTCAAGAATCATAATTAGTGAGCTATGTGTTTGATGTAGATTAATTCAATGGGTTTGTTTGATGTGTTTGATAAACTAAATATTTCCGAGTTACTCAAAATACCCAAAATTTTCATTATTACAAAGTATCTACCACGTACTTTCTATATTCACACTATGATTTAAATAATTCTTTAATGGGGAAATTTCTAGTACTATGAAAGTACTTTACTTCCCTTGATACTTCCTTTGTTCACATTATTATATTTTTGTATTTTTTGTAAATATTTTTTTAATTCCGTAGACCCTACATCATTATTAAAAAGATGATGAGGTAGGCAACATCCAACTCGAGAACAATACTTGGTTGGGTGTATAGGAAGGAAAAAACTTGGCTGCATACTCGTATGTATTAAAATGTTGACAACTAGGAGAGATAAATTTTTTTTCCCATTTTCTACCTTTCTCTTTCTTAGTTATCAAGATTTTATTGGGGTATGTTGGGAGATCCCTACATACTGGTATACAGCTAAGTTTTTGTTTGTGTAGGAATCTCTTTGTACACCTCATCAAAATCTTGACAACTAAAAGGGGAAAATGTAGAAAATGTGAAATTTTTTTCTAACTCTTCTAATTATCAGTGGTGTGTAGGGAGGTACCTATATAATGATATGCAACCAAGTATTTTTTTTTCATTCTTTAATGCAGCTAAATGACATCTAATGAGAGTAGTATTTATAGTAATTTTTTTTTCTTTCAGAAAATTAGTGAGAATATTTGATTATGGGTAAAGGTTAGTTAGAATTATGAAAGTCCATCTTGGATTTGAAGAAAATTAAAAGCATTTAGGAAAATAAAGAGTGGAAGAAAATGGCAATGAACAGCTATTCTCTCTCTCTCTTGTCTACTTTTAGAAAGCAAAGAGAGAAGGGCAACCTTTTGCAGATTATTCTTTCATCTCACATGTAAGACAGCAAAGGGATGAGTTATGAGTACAAGCTCTCAACAACTGTGTGCAAAGAGTGATGCTTCATTATGCTTCACAGGAATTTTCAATCAATTTTGTTTTAGCTAAAGTGGATCAAGTTCTTTTCCCACTTTATGACCAGTTTTGATTTTGATCCTTCTTTTTTTCTTCTTTATAAGCTTTTGGTCGTGTGGAATTCTTATTTTATACGTAAAAACACACATATATTGACAAGTGTACCCTCCTCTGCATGTTGCTTCTTCTTCATCTTTTTTTTATTTTTTTTAAAAAAAAAATGGTGTGGGGTTGCATTGATAGAGATGTTTCGTCTAATATTTCTGGAGGGAAAATTTTAACCAATCTCATGTAGTTTTTAATCAATAATTATTGGTGTAAGGCTGGTGTTGTAATAATTTCTACAGTGAATGGAGGCTCCAACGTCATGTCGAACAATGTCGTCTTAACCTTATTTATTTCAAAAGTCAAATCCACATAGAGACGACGACGACGACTCTTAACTTAACAACAAATGACAGTTATTATACTTGTCAAAAACATAAACGTTGGTCAATTAGGAGATAAATTTTTGCCATTTCTAAGTTTTTTAAGAGTTGGTAAATGTAGGAGTTACCTGAGCATCAACGGAGCGACGCAGTGAGCTCGATGGTATACGAGGCAAACGCGAGGATTCGAGATCCGGTTTACGGGTGTGTGGGAACAATATCATGTCTACAAAGGCAAGTGGATGCGCTACAAGAGCAACTGGCAATGACACAGGCCCAGCTGCTTCACTTGAAAATAGGCCAATTTTCTTCAACATTGCAATCATCATTATCTACTGAGAATAATGTCCATTCTCCGCCCAATATCAATGTGGGCACATCCACATCCACATCCACATCCTTGTGGTCTTGCTAG ATGGCGACGGAGATGATGATGAATGGGAGCTGCAAAAAGGGAGGTGGAGCTCCATCGCCTTGCGCTGCGTGCAAGCTTCTGCGGCGGCGGTGCGCTCAGGACTGCGTTTTTGCGCCTTATTTTCCTGCTGATCAGCCTCACAAATTCTCCAGTGTTCACAAGGTCTTTGGAGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTACCTGAGCATCAACGGAGCGACGCAGTGAGCTCGATGGTATACGAGGCAAACGCGAGGATTCGAGATCCGGTTTACGGGTGTGTGGGAACAATATCATGTCTACAAAGGCAAGTGGATGCGCTACAAGAGCAACTGGCAATGACACAGGCCCAGCTGCTTCACTTGAAAATAGGCCAATTTTCTTCAACATTGCAATCATCATTATCTACTGAGAATAATGTCCATTCTCCGCCCAATATCAATGTGGGCACATCCACATCCACATCCACATCCTTGTGGTCTTGCTAG ATGGCGACGGAGATGATGATGAATGGGAGCTGCAAAAAGGGAGGTGGAGCTCCATCGCCTTGCGCTGCGTGCAAGCTTCTGCGGCGGCGGTGCGCTCAGGACTGCGTTTTTGCGCCTTATTTTCCTGCTGATCAGCCTCACAAATTCTCCAGTGTTCACAAGGTCTTTGGAGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTACCTGAGCATCAACGGAGCGACGCAGTGAGCTCGATGGTATACGAGGCAAACGCGAGGATTCGAGATCCGGTTTACGGGTGTGTGGGAACAATATCATGTCTACAAAGGCAAGTGGATGCGCTACAAGAGCAACTGGCAATGACACAGGCCCAGCTGCTTCACTTGAAAATAGGCCAATTTTCTTCAACATTGCAATCATCATTATCTACTGAGAATAATGTCCATTCTCCGCCCAATATCAATGTGGGCACATCCACATCCACATCCACATCCTTGTGGTCTTGCTAG MATEMMMNGSCKKGGGAPSPCAACKLLRRRCAQDCVFAPYFPADQPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQRQVDALQEQLAMTQAQLLHLKIGQFSSTLQSSLSTENNVHSPPNINVGTSTSTSTSLWSC Homology
BLAST of Lag0015263 vs. NCBI nr
Match: XP_038888383.1 (LOB domain-containing protein 4-like [Benincasa hispida]) HSP 1 Score: 267.7 bits (683), Expect = 6.6e-68 Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = 0
BLAST of Lag0015263 vs. NCBI nr
Match: XP_008447124.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65 Identity = 130/162 (80.25%), Postives = 146/162 (90.12%), Query Frame = 0
BLAST of Lag0015263 vs. NCBI nr
Match: XP_004139827.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical protein Csa_015717 [Cucumis sativus]) HSP 1 Score: 255.8 bits (652), Expect = 2.6e-64 Identity = 128/159 (80.50%), Postives = 142/159 (89.31%), Query Frame = 0
BLAST of Lag0015263 vs. NCBI nr
Match: XP_022930643.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >KAG6589307.1 LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59 Identity = 127/155 (81.94%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Lag0015263 vs. NCBI nr
Match: KAG7023005.1 (LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59 Identity = 124/150 (82.67%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Lag0015263 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.5e-46 Identity = 94/164 (57.32%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Lag0015263 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 176.4 bits (446), Expect = 2.6e-43 Identity = 86/121 (71.07%), Postives = 102/121 (84.30%), Query Frame = 0
BLAST of Lag0015263 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.9e-38 Identity = 86/159 (54.09%), Postives = 111/159 (69.81%), Query Frame = 0
BLAST of Lag0015263 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 157.5 bits (397), Expect = 1.3e-37 Identity = 73/114 (64.04%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Lag0015263 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.4e-36 Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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