Lag0015215 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015215
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Actin-related protein 2/3 complex subunit
Location	chr12: 8777703 .. 8782731 (+)
RNA-Seq Expression	Lag0015215
Synteny	Lag0015215

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGCAATTGCAGTTCACCAGCTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTAGTAATTCACCCTTTTCCTTTTGTTCGCTTTCTTTAATTTCTTCATTCTGTTTTGCGCGGGACAAAAGGAATGGAAATGTCGAGTTTTCTGTAATTTGTTTGTCCTCAGTATAGGAAAAAGTTGAACTAAAATGCTTAGACGTGGATTTTATATGTCGAGATCGCTTATCTCTGTTTTCTGAGCAATCAAAGAGAGGGCAGAGATTTCAATTCAGCTTTAGCGATCTAGATTTAGCTTGCTTTATTGAGGAATGACGGGAACAACACTAGGATAGGTTACCTGCTAATTATGTTGTTGATTAAAATATGATAACCAGTATGTCTTATTGGGTAGGCTACCTGCTAATTATGTTGTTGATTAGCTTCAAGAGATCTGTTTACTGATAAGTTCCGTCATCGCCATTGAATGATCTTGAAATTCCTGGAGAAATGGACAGTTATCAGATCGGCTGCTAAGTTTTTCTGGTCACCCGGGGATTTGTTTGTTACTGAAACATTATGCATTGTCTAACTGTCTAGTATTGCAAAAGACGATTGTATCCAATTTATGTTTATGTTCATCATCTTACTGTGCTTGTGCTAATATTTTTTTATATATTTTGTAGTGGTTGCATTTTGTCCAAACAATAATGAAGTTCACATTTATAAATCATTACAAGACAACTGGGAGAGAGTACATGTTCTTCAAAAGGTACCTTTTAACTTTACTGTTTCCATTTATAATTTTTGAGAAAATATAAAACATAAGATTACTGCATTTTATCTATTCATGGTGATGATTTTCCGTTTTCATTCTGGCCCTGTGTTGTTAGTTTGAAGTGAAAACTTTCTAACCAAAACATGTTGTTAATCTCTAGTATTTATCCATCTTTTCTATGTCAGCATGATCAAATTATCTCTGGGATAGACTGGAGTGTTAAGTCAAACAGAATTGTGACTGCATCCCATGATCGAAATTCGTAAGTGTTATCTCATATTCATATTTTTTTCGTCCAGTTATATGTACATTCACCGGTTTTATTTTCTCCCCCCCCCCCCTTCTCCCCATCCCCATCTGGTCTCTCTCATATAATGTTTTGAGACTTTTACTTATTTATATGTACTATATTGGCCTACCAATCTTTTTTCTTTCTAGATATGTTTGGAACCTTGAAAGATCAGAGTGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCGTTGGAGTCCAAAAGGTAGTGCAATATTTCCTATCCTGCTGAACTCATCACTTTCATATCATCCTTAAATTTCAACATTTTCTATGATTCTTATCAATTACATATCTTCTATAAAAAAAAGGGTCATCCTTAAATTCTTGATCAGCTTAGTCATTGGTACCGCCAATTTTACTTTTTAGTCAATGCCCTATTAAATCCTCTACTCACAGAAAATTTGTGAATATTTGAATTCAGTCATCAAATTTTCTAAATTTAAAAGATTTATTATATTTACGAATGCAATATCAGGTAGACCTGGCATTGTTGAACGTCAATTGATGCTCGAAGTTTACCTATTTCTTGGGAATATGCTGGATCATGAAAGTCCCTTGACAAAATGTCAAAATAATTTCACGTCTGGTTTTGGATAGCGTTTGACTTGATGACCTCTTTGAGAATTCCCAGAGGATTTGTGAACACTACATAATTTATTGTCATTCAGGATTTGTGAACACTGCATAATTTATTGTCTATCATAAATCATAATATCCTGAAGAAAATACTACTTTAATCAAATTTGAGTTTTCACTTTTATATTTAAATGCTTGATTTTCCTTTTTACCCTTAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAATAATTGGTATGGCTCTTTCTCTCTTTTTGTTTAAGCTATTATGTTTATTGCTTTTATTTTCCATGAAGATGGAAACTCTGCTATATGATGAAGTTATTGCTGTTATATTATTAAAAAAAACATTTTTAATTTAAGAGCTTTGACCTGCATAAGTGAACTAGAAGTGTCCTTCCAATTGCTGGTCCTATGCTTGTGAAATTCAAATTTCTGTTGAGCTATGGATTGAGTATGTGATCTATTCCATAGTTTTCTTTTGGTGGTTCATTTTATGACAGGCGTAAACCAAATTGCTTTGCTGTTAGCTTTCTCAAATTTTGGTGTTTATTTTCTTTCCAAAACTTGCTGTTTGCAAGCAGTGGCATGCTTCTGTATACGCCATATGCATCTATATTTAATTGCTCGATGTTTCTCTTTTTTAGGAGAGTCGAGAGAGGCCATTCTAATATGTGATCCCTCATTAGGCTCAATGATTATCTCTAGACGTGGGTGATGAAGGTTTTTTTGTAATTACTCTTTAGGTCTCATTTTACTTGACTAGAGTTCCTTTCTGTAGTGGGATGTCCTCTTGTGGGCTTGTTTTTGTCCTTGCATTCTTCCATTAAAAAAAAAGTGTGGAGGAATGGAATCAATATTCAGTTGATAATGTTGATGATTTCTATGTTTACTATATTATTTTTTTTTTCCTTTGGTCTGTAGGATGCTATGGGGGTGCCTATTTGGTGAATTGATCTTTTTGTTGATTTTATTCATTTATGTCGATTTCTATATATCTATTTTTTTCTTTATAAATTTGGCTGCTTCTAATGATTTGTAATCTTTTGTTTCAAGGGCTTAAAAAAAAAAAAATCCAATGCTTTAGTTTATTTTCTAGCCAATAGCCATAATCAATACATTTCTGTTTCTTATCAGAAATGAAAAATCTCTTTATTATTGCTTCACCTAGTATGCTGATGCATTAGCTTTCCATATTTAACTTGTTCATGGTTTACCTTCCACAGGTGGGTCAGTAAACTTATAAGGAAAAGACACGATTCTTCTGTGACAAATGTTGCTTGGCATCCCAATAATGTTTGTTTTCCTTCTATCCTCTATTATATATGAATTTATATGGACAAATTTTTCAGTCTTTTTAGAAGATTTCCAATTAAATATACTTTACTGCTTGCTTGTAACTTTGTTTTTCTGAACAAAATTATGGTTGCTTGTTTTGGTTAAATTTTCTTTTACATTTTTTTCACAGCTGCTTCTTGCAACAACCTCAACAGATGGAAAATGTCGAATCTTTTCCACCTTCATCAAAGGTGTTGACACAAAGTATGTAGAGAATAGTTTAGACTGCATTCATCTCATGACATATTATAGGATTGATTTAGAAGTTACTGACGCTTAATTGAAACTTAACAGGGATTCAAGATCCGGCACATTTTCAGATTCAAAGTTCGGAGAGGTTTAATATTCAATTTTCTATTTTGCAACAAATAAATTTTCTTGTGCTTGGAAGAGTAGAATGGTTAAATTGTTTATAAAATAATTACTTGTTTCTCAGCTGCCCTTGGAATTAAATAAAATTGAAAACATAATTTATTAATTTATGACCTAAAAAGCGTGGATACGAATATGAGACATGGGTACGACACGACATGGACATGGTGACATGTCATTTTTTAAAAGTTTTTCCGTTTAGGACACAAACACAATAAAGACACAATTATTAAATATATATCATTTTTATACTAGAAAGAAATTCGAAGTCAATAAGTTTATACATGTATATGCTTAAAAGTTAAAAATGAGTTTGAGGTATTTTGCTCTCCAAATTTATTATTATGTGTCAATTAGTATGCTTAACAAGTGTTTGATACATGTGTAACAAGTGTTTGACCTATATTGGTTGTGTACAACTAGTGTCTAACACATCTATTTCTCTCTCTTTTGACAAGCAATGTAGTGTATATTATTTATGAGTAATTGCTTTTGGTGAATTAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGTCATTTGGCGTGAAGTGGTCACCAAGTGGCAATACCTTAGCTTATGCAGGTTAGAAATATCTCCTCTCTGCAAATTATTTACAAAGACAGCCTTAACTACAGTATGTGGAATAGCAACAAGCTTGAATTTCACTCGTGTAGTTAAGTCGCTTGTATGTCTTTTCTGCCTCTAACTGTAATTGTGGAAAAGTTCATTAGTTAACCTCCTATAACTTGTTATTTAACAATTGTAACTATGAACTTTCACCCATTGTTTTAATTACCTGAAAACAATTTATAGGATTCAACGAGAGCCTCATTCATTATGCTCTAGTTTAGATGGTGATTTGTTTGTTTTCTACTGATATGCCTTTTATTTAAATGATGTAGGTCACAATTCGATGATTTATTTCGTTGATGAAGTTGGTCCTTCTCCTTTAGCCCAGAATGTTGCATTCCGAGATTTGCCTCTTCGTGATGTGGGTCAGCATCCATTTTTCTTTACTCTTTGAGTATTTCTTGTCATTATTTAGATACAATGTACTATTTCGCTTTCTAATCTTGATTTTTTTGGATCAATATAACACTCTTTCAGATACTATTTGTTTCTGAGAGAATGGTTATAGGTGTAGGATTTGATTGCAATCCTATGGCTTTTGCTGCTGATGAAAGAGGGATCTGGTGAGCTATGCTTTTAATAAATTGTCTTATCTTTAAGATATTGTAATATTTTGAGGAATATTTAAAGTGATTTATCTGCTTCCCTTCCCGCCCACCAAAACTAGGAGCTTTGTAAGATTTCTTGGTGAGAGGAAAACAGCTTCAGGTTCAACATATGGATCCCAGGTATTGAATCGCTTAAAGTTTCTCAGTTAACAATTATTTTACGACTTAAGCTGTAAACAGAATGCATTGTCTACTGGCTCAATGCTTAGTTATTTTTATGTGTCTTCTTAGTTAGGTTTACAGATGACCTGATCTAATTGGGTCATTGCTTGTTTAGTTGTTCCACCCCTGGCCGAATCCTCGGCCTACTGGGCATGGCGGGGCTGCAAGTATATGGAGTATGGACTTAA

mRNA sequence

ATGACAGCAATTGCAGTTCACCAGCTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTATGGTTGCATTTTGTCCAAACAATAATGAAGTTCACATTTATAAATCATTACAAGACAACTGGGAGAGAGTACATGTTCTTCAAAAGCATGATCAAATTATCTCTGGGATAGACTGGAGTGTTAAGTCAAACAGAATTGTGACTGCATCCCATGATCGAAATTCATATGTTTGGAACCTTGAAAGATCAGAGTGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCGTTGGAGTCCAAAAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAATAATTGGTGGGTCAGTAAACTTATAAGGAAAAGACACGATTCTTCTGTGACAAATGTTGCTTGGCATCCCAATAATCTGCTTCTTGCAACAACCTCAACAGATGGAAAATGTCGAATCTTTTCCACCTTCATCAAAGGTGTTGACACAAAGGATTCAAGATCCGGCACATTTTCAGATTCAAAGTTCGGAGAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGTCATTTGGCGTGAAGTGGTCACCAAGTGGCAATACCTTAGCTTATGCAGGTCACAATTCGATGATTTATTTCGTTGATGAAGTTGGTCCTTCTCCTTTAGCCCAGAATGTTGCATTCCGAGATTTGCCTCTTCGTGATATACTATTTGTTTCTGAGAGAATGGTTATAGGTGTAGGATTTGATTGCAATCCTATGGCTTTTGCTGCTGATGAAAGAGGGATCTGTTGTTCCACCCCTGGCCGAATCCTCGGCCTACTGGGCATGGCGGGGCTGCAAGTATATGGAGTATGGACTTAA

Coding sequence (CDS)

ATGACAGCAATTGCAGTTCACCAGCTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTATGGTTGCATTTTGTCCAAACAATAATGAAGTTCACATTTATAAATCATTACAAGACAACTGGGAGAGAGTACATGTTCTTCAAAAGCATGATCAAATTATCTCTGGGATAGACTGGAGTGTTAAGTCAAACAGAATTGTGACTGCATCCCATGATCGAAATTCATATGTTTGGAACCTTGAAAGATCAGAGTGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCGTTGGAGTCCAAAAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAATAATTGGTGGGTCAGTAAACTTATAAGGAAAAGACACGATTCTTCTGTGACAAATGTTGCTTGGCATCCCAATAATCTGCTTCTTGCAACAACCTCAACAGATGGAAAATGTCGAATCTTTTCCACCTTCATCAAAGGTGTTGACACAAAGGATTCAAGATCCGGCACATTTTCAGATTCAAAGTTCGGAGAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGTCATTTGGCGTGAAGTGGTCACCAAGTGGCAATACCTTAGCTTATGCAGGTCACAATTCGATGATTTATTTCGTTGATGAAGTTGGTCCTTCTCCTTTAGCCCAGAATGTTGCATTCCGAGATTTGCCTCTTCGTGATATACTATTTGTTTCTGAGAGAATGGTTATAGGTGTAGGATTTGATTGCAATCCTATGGCTTTTGCTGCTGATGAAAGAGGGATCTGTTGTTCCACCCCTGGCCGAATCCTCGGCCTACTGGGCATGGCGGGGCTGCAAGTATATGGAGTATGGACTTAA

Protein sequence

MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGICCSTPGRILGLLGMAGLQVYGVWT

Homology

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BLAST of Lag0015215 vs. NCBI nr
Match: XP_008449504.1 (PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo])

HSP 1 Score: 580.5 bits (1495), Expect = 8.6e-162
Identity = 272/280 (97.14%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+GTFSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           QNVAFRDLPLRDILFVSERMVIGVGFDC+PMAFAADERGI
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCHPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. NCBI nr
Match: XP_038886984.1 (actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida])

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 271/280 (96.79%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ A+CITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAECITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIF+TFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFATFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+GTFSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. NCBI nr
Match: XP_023553744.1 (actin-related protein 2/3 complex subunit 1B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160
Identity = 270/280 (96.43%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+G FSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           Q+VAFRDLPLRDILFVSERMVIG GFDCNPMAFAADERGI
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. NCBI nr
Match: XP_023553745.1 (actin-related protein 2/3 complex subunit 1B-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160
Identity = 270/280 (96.43%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+G FSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           Q+VAFRDLPLRDILFVSERMVIG GFDCNPMAFAADERGI
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. NCBI nr
Match: XP_022952913.1 (actin-related protein 2/3 complex subunit 1B isoform X1 [Cucurbita moschata] >KAG6572430.1 Actin-related protein 2/3 complex subunit 1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 269/280 (96.07%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+G FSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           Q+VAFRDLPLRDILFVSERMVIG GFDCNPMAFAADERGI
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. ExPASy Swiss-Prot
Match: Q9SJW6 (Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ARPC1B PE=2 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 7.1e-143
Identity = 232/281 (82.56%), Postives = 263/281 (93.59%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISG 60
           M  + VH+ A+ ITCHAWSPD SMVA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKLIRKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPL 240
           TKDS++G+ +++KFGE I+QLDLS+SW+FGVKWSPSGNTLAY GH+SMIYFVD+VGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           AQ+VAFRDLPLRD+LF+SE+MVIGVG+D NPM FAAD+ GI
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGI 281

[Close]

BLAST of Lag0015215 vs. ExPASy Swiss-Prot
Match: O80856 (Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ARPC1A PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.6e-142
Identity = 231/281 (82.21%), Postives = 263/281 (93.59%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISG 60
           M  + VH+ A+ ITCHAWSPD SMVA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKLIRKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPL 240
           TKDS++G+ +++KFGE I+QLDLS+SW+FGVKWSPSGNTLAY GH+SMIYFVD+VGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           AQ+VAFRDLPLRD+LF+SE+MVIGVG+D NPM FA+D+ GI
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGI 281

[Close]

BLAST of Lag0015215 vs. ExPASy Swiss-Prot
Match: O96622 (Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=arcA PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.5e-81
Identity = 135/271 (49.82%), Postives = 188/271 (69.37%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           M+A  +  LA CIT HAW+ D S VA CPNNNEVHIY     +W   HVL +HDQ+++ I
Sbjct: 1   MSAFEIEHLASCITAHAWNADRSRVALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DW+ K+NRI+T+S DRN+YVW  +  +W P LV+LR+NRAA  V+WSP+ENKFAV +GAK
Sbjct: 61  DWAPKTNRILTSSQDRNAYVWTFKDGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
            VCIC++E+E++WW S  I K+H S+V  V WHPNNLLLAT+S+D K R+F  +IK  D 
Sbjct: 121 LVCICFFEEEHDWWASNHI-KKHKSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADG 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           + S +  + +  FGE + + D   SW   +KWSPSG+TLAY+ H+ +    +     P  
Sbjct: 181 R-SVTRPYGEVAFGEPVFEFDQCASWVHALKWSPSGSTLAYSSHDGVFAVANFSTNPPTI 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPM 272
           + +  R+LPLRD+L+++E  + GVG+DC P+
Sbjct: 241 EKLRVRNLPLRDLLYITENSIAGVGYDCAPL 269

[Close]

BLAST of Lag0015215 vs. ExPASy Swiss-Prot
Match: Q9WV32 (Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=4)

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-75
Identity = 132/280 (47.14%), Postives = 184/280 (65.71%), Query Frame = 0


Query: 9   LAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVKSNR 68
           L + I+CHAW+ D + +A CPNN+EVHIY+     W +VH L++H+  ++GIDW+ +SNR
Sbjct: 7   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDWAPESNR 66

Query: 69  IVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYE 128
           IVT   DRN+YVW L+   W PTLVILR+NRAA CVRW+P ENKFAVGSG++ + ICY+E
Sbjct: 67  IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFE 126

Query: 129 QENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRSGTF 188
           QEN+WWV K I+K   S+V ++ WHPNN+LLA  S D KCRIFS +IK V+ + + +   
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186

Query: 189 SDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDL 248
           S   FGEL+ +   S  W  GV +S SG+ +A+  H+S +  VD      +A  +A   L
Sbjct: 187 SKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVDADKKMAVA-TLASETL 246

Query: 249 PLRDILFVSERMVIGVGFDCNPMAFAADERGICCSTPGRI 289
           PL  + F++E  ++  G DC P+ F  D   +  S  GR+
Sbjct: 247 PLLAVTFITENSLVAAGHDCFPVLFTYDNAAVTLSFGGRL 285

[Close]

BLAST of Lag0015215 vs. ExPASy Swiss-Prot
Match: O88656 (Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3)

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-74
Identity = 132/280 (47.14%), Postives = 182/280 (65.00%), Query Frame = 0


Query: 9   LAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGIDWSVKSNR 68
           L + I+CHAW+ D + +A CPNN+EVHIY+     W +VH L++H+  ++GIDW+ +SNR
Sbjct: 7   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDWAPESNR 66

Query: 69  IVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAKTVCICYYE 128
           IVT   DRN+YVW L+   W PTLVILR+NRAA CVRW+P ENKFAVGSG++ + ICY+E
Sbjct: 67  IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFE 126

Query: 129 QENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSRSGTF 188
           QEN+WWV K I+K   S+V ++ WHPNN+LLA  S D KCRIFS +IK V+ + + +   
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186

Query: 189 SDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLAQNVAFRDL 248
           S   FGEL+ +   S  W  GV +S  G+ +A+  H+S +  VD      +A  +A   L
Sbjct: 187 SKMPFGELMFESSSSCGWVHGVCFSAGGSRVAWVSHDSTVCLVDAEKKMAVA-TLASETL 246

Query: 249 PLRDILFVSERMVIGVGFDCNPMAFAADERGICCSTPGRI 289
           PL  I F++E  ++  G DC P+ F  D      S  GR+
Sbjct: 247 PLLAITFITENSLVAAGHDCFPVLFTYDNAAGTLSFGGRL 285

[Close]

BLAST of Lag0015215 vs. ExPASy TrEMBL
Match: A0A1S3BM68 (Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC103491371 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.1e-162
Identity = 272/280 (97.14%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+GTFSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           QNVAFRDLPLRDILFVSERMVIGVGFDC+PMAFAADERGI
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCHPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. ExPASy TrEMBL
Match: A0A6J1GN61 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111455454 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.1e-160
Identity = 269/280 (96.07%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+G FSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           Q+VAFRDLPLRDILFVSERMVIG GFDCNPMAFAADERGI
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. ExPASy TrEMBL
Match: A0A6J1GLX8 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111455454 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.1e-160
Identity = 269/280 (96.07%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ AQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDSR+G FSDSKFGELIVQLDLSFSW+FGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           Q+VAFRDLPLRDILFVSERMVIG GFDCNPMAFAADERGI
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. ExPASy TrEMBL
Match: A0A0A0KHX9 (Actin-related protein 2/3 complex subunit OS=Cucumis sativus OX=3659 GN=Csa_6G422800 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 268/280 (95.71%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVHQ A CITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAHCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDS++GTFSDSKFGELIVQLDLSFSW+FGVKWS SGNTLAYAGHNSMIYFVDEVGPSPLA
Sbjct: 181 KDSKAGTFSDSKFGELIVQLDLSFSWAFGVKWSASGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           Q+VAFRDLPLRDILFVSERMVIGVGFDC+PMAFAADERGI
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGVGFDCHPMAFAADERGI 280

[Close]

BLAST of Lag0015215 vs. ExPASy TrEMBL
Match: A0A6J1JFB5 (Actin-related protein 2/3 complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111486386 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159
Identity = 272/301 (90.37%), Postives = 279/301 (92.69%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60
           MTAIAVH  AQCITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCV+WSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240
           KDS++G FSDSKFGELIVQLDLSFSW+FGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGICCSTPGRILGLLGMAGLQVY 300
           QNVA RDLPLRDILFVSERMVIGVGFDCNPM FAADERGI      R LG    A    Y
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFI--RFLGERKTASASKY 299

Query: 301 G 302
           G
Sbjct: 301 G 299

[Close]

BLAST of Lag0015215 vs. TAIR 10
Match: AT2G31300.1 (actin-related protein C1B )

HSP 1 Score: 508.1 bits (1307), Expect = 5.0e-144
Identity = 232/281 (82.56%), Postives = 263/281 (93.59%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISG 60
           M  + VH+ A+ ITCHAWSPD SMVA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKLIRKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPL 240
           TKDS++G+ +++KFGE I+QLDLS+SW+FGVKWSPSGNTLAY GH+SMIYFVD+VGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           AQ+VAFRDLPLRD+LF+SE+MVIGVG+D NPM FAAD+ GI
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGI 281

[Close]

BLAST of Lag0015215 vs. TAIR 10
Match: AT2G30910.1 (actin-related protein C1A )

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-143
Identity = 231/281 (82.21%), Postives = 263/281 (93.59%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISG 60
           M  + VH+ A+ ITCHAWSPD SMVA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKLIRKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPL 240
           TKDS++G+ +++KFGE I+QLDLS+SW+FGVKWSPSGNTLAY GH+SMIYFVD+VGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           AQ+VAFRDLPLRD+LF+SE+MVIGVG+D NPM FA+D+ GI
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGI 281

[Close]

BLAST of Lag0015215 vs. TAIR 10
Match: AT2G30910.3 (actin-related protein C1A )

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-143
Identity = 231/281 (82.21%), Postives = 263/281 (93.59%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISG 60
           M  + VH+ A+ ITCHAWSPD SMVA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKLIRKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSRSGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPL 240
           TKDS++G+ +++KFGE I+QLDLS+SW+FGVKWSPSGNTLAY GH+SMIYFVD+VGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           AQ+VAFRDLPLRD+LF+SE+MVIGVG+D NPM FA+D+ GI
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGI 281

[Close]

BLAST of Lag0015215 vs. TAIR 10
Match: AT2G30910.2 (actin-related protein C1A )

HSP 1 Score: 485.0 bits (1247), Expect = 4.6e-137
Identity = 227/283 (80.21%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 1   MTAIAVHQLAQCITCHAWSPDHSMVAFCPNNNEVHIYKSL-QDNWERVHVLQKHDQIISG 60
           M  + VH+ A+ ITCHAWSPD SMVA CPNN EVHIYKSL QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCVRWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LE +EWVPTLVILRLNRAALCV+WSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKLIRKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSR--SGTFSDSKFGELIVQLDLSFSWSFGVKWSPSGNTLAYAGHNSMIYFVDEVGPS 240
           TK +   +G F   K  + I+QLDLS+SW+FGVKWSPSGNTLAY GH+SMIYFVD+VGPS
Sbjct: 181 TKYAHYLNGAFFLLK--QQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPS 240

Query: 241 PLAQNVAFRDLPLRDILFVSERMVIGVGFDCNPMAFAADERGI 281
           PLAQ+VAFRDLPLRD+LF+SE+MVIGVG+D NPM FA+D+ GI
Sbjct: 241 PLAQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGI 281

[Close]

BLAST of Lag0015215 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 38/133 (28.57%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 45  ERVHVLQKHDQIISGIDWSVKSNRIVTASHDRNSYVWNLERSEWVPTLVILRLNRAALCV 104
           E V     H+  IS + +S  +  IV+AS D+   +W++E    + TL+       A CV
Sbjct: 62  EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAFCV 121

Query: 105 RWSPKENKFAVGSGAKTVCICYYEQENNWWVSK----LIRKRHDSSVTNVAWHPNNLLLA 164
            ++P+ N    GS  +TV I        W V+      +   H   VT V ++ +  L+ 
Sbjct: 122 NFNPQSNMIVSGSFDETVRI--------WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 181

Query: 165 TTSTDGKCRIFST 174
           ++S DG CRI+ +
Sbjct: 182 SSSYDGLCRIWDS 184

The following BLAST results are available for this feature:

BLAST of Lag0015215 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449504.1	8.6e-162	97.14	PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo]	[more]
XP_038886984.1	1.1e-161	96.79	actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida]	[more]
XP_023553744.1	1.2e-160	96.43	actin-related protein 2/3 complex subunit 1B-like isoform X1 [Cucurbita pepo sub...	[more]
XP_023553745.1	1.2e-160	96.43	actin-related protein 2/3 complex subunit 1B-like isoform X2 [Cucurbita pepo sub...	[more]
XP_022952913.1	1.0e-159	96.07	actin-related protein 2/3 complex subunit 1B isoform X1 [Cucurbita moschata] >KA...	[more]

BLAST of Lag0015215 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW6	7.1e-143	82.56	Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O80856	1.6e-142	82.21	Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O96622	3.5e-81	49.82	Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689...	[more]
Q9WV32	1.3e-75	47.14	Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b ...	[more]
O88656	1.4e-74	47.14	Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Ar...	[more]

BLAST of Lag0015215 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BM68	4.1e-162	97.14	Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC10349137...	[more]
A0A6J1GN61	5.1e-160	96.07	Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1GLX8	5.1e-160	96.07	Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0KHX9	1.1e-159	95.71	Actin-related protein 2/3 complex subunit OS=Cucumis sativus OX=3659 GN=Csa_6G42...	[more]
A0A6J1JFB5	2.5e-159	90.37	Actin-related protein 2/3 complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Lag0015215 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31300.1	5.0e-144	82.56	actin-related protein C1B	[more]
AT2G30910.1	1.1e-143	82.21	actin-related protein C1A	[more]
AT2G30910.3	1.1e-143	82.21	actin-related protein C1A	[more]
AT2G30910.2	4.6e-137	80.21	actin-related protein C1A	[more]
AT3G49660.1	2.6e-07	28.57	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 43..82 e-value: 1.0E-4 score: 31.7 coord: 2..38 e-value: 95.0 score: 4.5 coord: 132..172 e-value: 3.7E-5 score: 33.2 coord: 87..126 e-value: 7.4 score: 11.5 coord: 193..232 e-value: 12.0 score: 10.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 45..82 e-value: 0.032 score: 15.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 50..91 score: 11.711506
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 140..172 score: 9.639578
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 105..172 e-value: 1.7E-5 score: 25.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..285 e-value: 9.2E-116 score: 388.6
IPR017383	Actin-related protein 2/3 complex subunit 1	PANTHER	PTHR10709	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1	coord: 1..279
None	No IPR available	PANTHER	PTHR10709:SF2	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT	coord: 1..279
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 50..87 score: 9.309238
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 69..83
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 11..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015215.1	Lag0015215.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0005515	protein binding