Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAATGGATACCAGCCACCGAAGTTTCAACAATTCGACGGGAAGGGCAATCCCAAGCAGCACATTGCTCATTTCATTGAGACGTGTGAAAATGCTGGTACTAGAGGAGATCTACTAGTCAAGCAGTTCGTACGAACACTGAAGGGAAATGCTTTCGATTGGTATACAGACCTTGAGCCTGAAACTATTGGTAGTTGGGAGCAACTTGAGAAGGAGTTCCTCAACCACTTCTACAGCACAAGACGAACCGTCAGTATGACGGAGCTCACCAGTGCTAAACAACGGAAAGGTGAGCCAGTTGTTGACTACATCAACCGTTGGAGAGCTCTGAGCCTAGACTGCAAGGACCGACTCACCGAAGTGTCTTCTGTTGAGATGTGCACTCAAGGCATGCACTGGGAACTCCTCTACATCCTTCAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCGCGCTCACGATATGGAGTTAAGTATTGCTAGTCGAGGAGATAAAGACCTTCTACTCTCTAATATGAAGAAAGACGAAAAGAACATTGAAGCAACTATAGAAGAATCTATGGTTGTAAATACAACCCCTCTCGAGTTGTCTTCTAAAGAAAAACACAAGAAGATTGAAAAGCAACAAGGAAATGAAAGACGTCACTTGACTTTGAAGGAAAGACAGAAAAAGATCTATCCTTTTCCAAATTCTGACGTCCCTAACATGTTAGAACAACTACTGAAAACGCGGTTGATAGAACTCCCCGAGTGCAAACGACCAGAAGAGATTGAAAAGGTCGATGATCCCAACTACTGCATGTATCATCGAGTTATCAGCCACCCAGTAGAAAAATGTTTTGTCCTGAAAGAGTTAATTCTAAGGTTAGCTAAAGAAGGAAAAATCGAATTGGACCTTGAAGAAGTAGCTCAATCAAATCATGCTGCAATAGCAACAAACACTTGCAGTCAAATGTGTTTTGGTTCGCTTCATGATCAAGAGGTGCACCTAGTCCAATTTGGAACCATTGAACCTATAGCTATTTGGTTTCATCATGAGGTATTAGGAGACAAATCTCAAGATCCTGTCAATCTTGTCAATAATGAAGATAAAGGAAGTACTATCATGACTCGTAAGAAGAAACAAGAACGACATCTCGTTCAAAAAGGATGTTGTTCATCAGAAAGAGTGAATAAACATCAAAGACGGAAGAATCCAAGGAAACCTAAACTTGAGGAAAAGAGAGATCAAAGTCCTGTTCGACATTGTCGACTAGTAACCTTAAAAGAATCGTTTCTGAGAAATTTTCATCCCGTCAAGAAAGTGGAAGAACACTTTGTAAGTTCATGTTATATCAACATAGAAGAAGATGGTATATCAAAGGAAATCAAGCAAAGGACTTCAGTCTTTGATCGCATTGAACCTTCAACTACTCAAACTTCGGTCTTTCAAAGAATGAGTATGGCTGCAGCAAGAGAAGAAGATCAAAGCTTGACGTCCGCCATCACTCGACATTCAGTTTTCCAAAGACTAAGCGTCTCTACATCAAGAAAGTGTCGACCTTCAACAACTGTTTTTGATCGCCTCAAAGTAAGAAGCAGCCAACGTGAAAGAAAGGTGGACAGTTCAGAAGTTAAATTATTCGATGAAGTACACAATGACAAGAAGCTTCATAGTACCATTTCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAAAAGGTTCCTTGAAGGTGAAACCAAATCTTGTCATTTTGACAAATCCTACAGATGAAGGATCTGATCAAGACTATGGTAGAGAAAAAGAAATTTAAAATGTAAATGCTCCTTATCACATGGGCATAAACTGCATGATGCTCCTGGCCCACACGAGCTTAAAAGGTGAATGCAAAAAACAAAACAAAAAACTTGAACTACGTAATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGTAGCTTAAAGAAAACTTTAAGTTCAGTCTCTGCAAAAAAAAAAAAAAAAAAAATGCAACAAACATTGAAACACGACAATACAAATTGAAGAAGTTAATCACTATTGGGGGCAACACAACAAATTGAAGTTGTGCACCGTTATGAATATGAAGCTACGAGTTGGATGAATAAAAGAAGATTTCATTCCTCCAAATTCAATGTCTCGCTAGCCTCAAGTTCAGTGTTTCACTCACCCTAAGTTCGTGCATTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCGTTCCGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGATTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCGTTCTGCTACAGTTCCTTCTCTCCAAGTGTAAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTACGTTGCTTCCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGTTGCGCTTCGTTGCAGTTCTTTCCTCCAAGTTCGAAAGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCCTCACGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTTTCCAAGTTTGAAGGTGCTTCTCTCTGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAATGTGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCATCGTTGCTTCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCGTTCCACTCCATTTTCAAATGTTGGCAGTTGACGGCGTCCGCTGCGCTTCATCTTCAAATGTTGGCAGCTGACGGCGTCCGCTTCGCTTCATCTTCAAAAAAATTGACTATTGATAACTTCACTTCATATTCAAAAGTTGACGGTTGAAGTCCTCGCTACATCTGCAAAGATGAACAACTTTAGTGTTGCCTTTATCTTGAAAGTGTCTAGACTGGAAGATGCATCTTAGCTGCAAGTTAAAAAAAATGCTTGATATCAAACCACAAAAAAAAAAAAGGAAGAAAGACAATAAAGGTGTTGTTAAAAAATGGTGACCACCCCTGCAGGAAACTACCGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAATTGAATCTGATGACGACCGTTGTAGGAGTCTGGTGACCACCCTTGCAGGTTACTCAGATCATCCAATAAAATGGGGACTGGTTTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGAGAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTAGTAACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCATGAGTGCATCACTGTAGGCAAATCTGGTGACTACCTCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCTCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAATGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCATATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTAGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACCGGTCTAGCAGGAATGCATCACTGAAGGCGAATTTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATAGGGGACTGGTCTAGCAGGAGTGAAATAACTGCAATCGAATTTGGTGACGACTGTTGCACGATGCTTACACTCTCAAGCAATAAAGAAATAGATTGCAGTAATATGTGTGCAAATAAAAAGGTAGCAGACAAGAAAATCTATGGCACAATCAAAGTAGTTCATATGTGCACATGCAATAAAGACACCGATGGAATATATGCATATTTTTTTTTAAAAAAAGTTTGAATATGTATATACCTTTCAAATGGTGGACAAATGTTGATGTTGTGTTCAAGGAGATTGTCGAAGGTTTTTGAAGGTTCTTTTACTTAACGGCGGCATGGAAAAAGAAGCACAAAAGGAGATTATTGCTCGAAGTCAAAACCTATACAAAGACAAAAATATATGAGCATTCGAAGTCAAATCAAGCCAAGAAAAAGAAAAGAGAATGAAACAAGAACGATGTTAGCAAACAAAAAAAAGGTTTATGTCTATGTTGTATGTGGCAATTTATAAACGCATATTCAATTAGAGCATTACAAAGAAAGAAATGAATATGTACCTACCCTTAGGTGATAAGCAAATACCTGCAAAGGAAGTAATTGCCAAACATGGTTGTTTTCTACAATTGAGAAAGAAAGTATGATTAGCGAAGCGCAACAAAAGAAGCCCCACAATTGAAAGAAAAAAATGAAAGATTGCTTTAGAAAAGAGAGAGAGAGATAGAAAATCGTTAAAAAAAATTTGGATGAAAATAAAATGCACACTGATAGAGCATGAGGCAAAAAAAAAAATTAAAAAAAAGGATTAAAAAAAAAGTAGGGCTGCTGAGGTTTTAAGAAGGAAAAAAAATGTTTATTTCTTTCTCTTTCTTCTCTCAGTACCAACACCATCGCCGCAAACCCATTTTATTTTACTTAACCTCCGCTTATCAAAACGCCGACAACTCTCAGGAAAGCAGCATCCTTACTTTCTTCACCGTAAAACCTTCGATCAATGTCCAATGGAGACCTATGGCGGTGGTGTATTCGCACGAACGCGGACTCGGCAACGACAACATTTTTGTTCTCTTCCTTCCGATTTCTTGCAATCTAACCGCGACGAGTCTTTTCCCTTCCTCTGACTGTCGTTCGACGTTAGTGGAAAGCTCAAGTGGGACACAAACAACGGCGGGGTATTCAACAACTCTACTGTTTGCACAAACCCACAATGATGGAACCTCCTCCCTCGATGCAACAAAACTGATGATCGACGATGTTGAGCCCATGTGA
mRNA sequence
ATGCCTAATGGATACCAGCCACCGAAGTTTCAACAATTCGACGGGAAGGGCAATCCCAAGCAGCACATTGCTCATTTCATTGAGACGTGTGAAAATGCTGGTACTAGAGGAGATCTACTAGTCAAGCAGTTCGTACGAACACTGAAGGGAAATGCTTTCGATTGGTATACAGACCTTGAGCCTGAAACTATTGGTAGTTGGGAGCAACTTGAGAAGGAGTTCCTCAACCACTTCTACAGCACAAGACGAACCGTCAGTATGACGGAGCTCACCAGTGCTAAACAACGGAAAGGTGAGCCAGTTGTTGACTACATCAACCGTTGGAGAGCTCTGAGCCTAGACTGCAAGGACCGACTCACCGAAGTGTCTTCTGTTGAGATGTGCACTCAAGGCATGCACTGGGAACTCCTCTACATCCTTCAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCGCGCTCACGATATGGAGTTAAGTATTGCTAGTCGAGGAGATAAAGACCTTCTACTCTCTAATATGAAGAAAGACGAAAAGAACATTGAAGCAACTATAGAAGAATCTATGGTTGTAAATACAACCCCTCTCGAGTTGTCTTCTAAAGAAAAACACAAGAAGATTGAAAAGCAACAAGGAAATGAAAGACGTCACTTGACTTTGAAGGAAAGACAGAAAAAGATCTATCCTTTTCCAAATTCTGACGTCCCTAACATGTTAGAACAACTACTGAAAACGCGGTTGATAGAACTCCCCGAGTGCAAACGACCAGAAGAGATTGAAAAGGTCGATGATCCCAACTACTGCATGTATCATCGAGTTATCAGCCACCCAGTAGAAAAATGTTTTGTCCTGAAAGAGTTAATTCTAAGGTTAGCTAAAGAAGGAAAAATCGAATTGGACCTTGAAGAAGTAGCTCAATCAAATCATGCTGCAATAGCAACAAACACTTGCAGTCAAATGTGTTTTGGTTCGCTTCATGATCAAGAGGTGCACCTAGTCCAATTTGGAACCATTGAACCTATAGCTATTTGGTTTCATCATGAGGTATTAGGAGACAAATCTCAAGATCCTGTCAATCTTGTCAATAATGAAGATAAAGGAAGTACTATCATGACTCGTAAGAAGAAACAAGAACGACATCTCGTTCAAAAAGGATGTTGTTCATCAGAAAGAGTGAATAAACATCAAAGACGGAAGAATCCAAGGAAACCTAAACTTGAGGAAAAGAGAGATCAAAGTCCTGTTCGACATTGTCGACTAGTAACCTTAAAAGAATCGTTTCTGAGAAATTTTCATCCCGTCAAGAAAGTGGAAGAACACTTTGTAAGTTCATGTTATATCAACATAGAAGAAGATGGTATATCAAAGGAAATCAAGCAAAGGACTTCAGTCTTTGATCGCATTGAACCTTCAACTACTCAAACTTCGGTCTTTCAAAGAATGAGTATGGCTGCAGCAAGAGAAGAAGATCAAAGCTTGACGTCCGCCATCACTCGACATTCAGTTTTCCAAAGACTAAGCGTCTCTACATCAAGAAAGTGTCGACCTTCAACAACTGTTTTTGATCGCCTCAAAGTAAGAAGCAGCCAACGTGAAAGAAAGGTGGACAGTTCAGAAGTTAAATTATTCGATGAAGTACACAATGACAAGAAGCTTCATAGTACCATTTCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAAAAGGTTCCTTGAAGGTGAAACCAAATCTTGTCATTTTGACAAATCCTACAGATGAAGGATCTGATCAAGACTATGGTTCTCACGCGTTCCGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTTCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCGTTCTGCTACAGTTCCTTCTCTCCAAGTGTAAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTACGTTGCTTCCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGTTGCGCTTCGTTGCAGTTCTTTCCTCCAAGTTCGAAAGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCCTCACGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTTTCCAAGTTTGAAGGTGCTTCTCTCTGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAATGTGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCATCGTTGCTTCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCGTTCCACTCCATTTTCAAATGTTGGCAGTTGACGGCGTCCGCTGCGCTTCATCTTCAAATACAGGTGGTGAAATCACTGCAATTGAATCTGATGACGACCGTTGTAGGAGTCTGGTGACCACCCTTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGAGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCATGAGTGCATCACTGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGAGTGCATCACTGAAGGCGAATCTAGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATAGGGGACTGGTCTAGCAGGAGTGAAATAACTGCAATCGAATTTGGTGACGACTGTTGCACGATGCTTACACTCTCAAGCAATAAAGAAATAGATTGCAGTAATATGTGTGCAAATAAAAAGTACCAACACCATCGCCGCAAACCCATTTTATTTTACTTAACCTCCGCTTATCAAAACGCCGACAACTCTCAGGAAAGCAGCATCCTTACTTTCTTCACCGTAAAACCTTCGATCAATGTCCAATGGAGACCTATGGCGGTGGTGTATTCGCACGAACGCGGACTCGGCAACGACAACATTTTTGTTCTCTTCCTTCCGATTTCTTGCAATCTAACCGCGACGAGTCTTTTCCCTTCCTCTGACTGTCGTTCGACGTTAGTGGAAAGCTCAAGTGGGACACAAACAACGGCGGGGTATTCAACAACTCTACTGTTTGCACAAACCCACAATGATGGAACCTCCTCCCTCGATGCAACAAAACTGATGATCGACGATGTTGAGCCCATGTGA
Coding sequence (CDS)
ATGCCTAATGGATACCAGCCACCGAAGTTTCAACAATTCGACGGGAAGGGCAATCCCAAGCAGCACATTGCTCATTTCATTGAGACGTGTGAAAATGCTGGTACTAGAGGAGATCTACTAGTCAAGCAGTTCGTACGAACACTGAAGGGAAATGCTTTCGATTGGTATACAGACCTTGAGCCTGAAACTATTGGTAGTTGGGAGCAACTTGAGAAGGAGTTCCTCAACCACTTCTACAGCACAAGACGAACCGTCAGTATGACGGAGCTCACCAGTGCTAAACAACGGAAAGGTGAGCCAGTTGTTGACTACATCAACCGTTGGAGAGCTCTGAGCCTAGACTGCAAGGACCGACTCACCGAAGTGTCTTCTGTTGAGATGTGCACTCAAGGCATGCACTGGGAACTCCTCTACATCCTTCAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCGCGCTCACGATATGGAGTTAAGTATTGCTAGTCGAGGAGATAAAGACCTTCTACTCTCTAATATGAAGAAAGACGAAAAGAACATTGAAGCAACTATAGAAGAATCTATGGTTGTAAATACAACCCCTCTCGAGTTGTCTTCTAAAGAAAAACACAAGAAGATTGAAAAGCAACAAGGAAATGAAAGACGTCACTTGACTTTGAAGGAAAGACAGAAAAAGATCTATCCTTTTCCAAATTCTGACGTCCCTAACATGTTAGAACAACTACTGAAAACGCGGTTGATAGAACTCCCCGAGTGCAAACGACCAGAAGAGATTGAAAAGGTCGATGATCCCAACTACTGCATGTATCATCGAGTTATCAGCCACCCAGTAGAAAAATGTTTTGTCCTGAAAGAGTTAATTCTAAGGTTAGCTAAAGAAGGAAAAATCGAATTGGACCTTGAAGAAGTAGCTCAATCAAATCATGCTGCAATAGCAACAAACACTTGCAGTCAAATGTGTTTTGGTTCGCTTCATGATCAAGAGGTGCACCTAGTCCAATTTGGAACCATTGAACCTATAGCTATTTGGTTTCATCATGAGGTATTAGGAGACAAATCTCAAGATCCTGTCAATCTTGTCAATAATGAAGATAAAGGAAGTACTATCATGACTCGTAAGAAGAAACAAGAACGACATCTCGTTCAAAAAGGATGTTGTTCATCAGAAAGAGTGAATAAACATCAAAGACGGAAGAATCCAAGGAAACCTAAACTTGAGGAAAAGAGAGATCAAAGTCCTGTTCGACATTGTCGACTAGTAACCTTAAAAGAATCGTTTCTGAGAAATTTTCATCCCGTCAAGAAAGTGGAAGAACACTTTGTAAGTTCATGTTATATCAACATAGAAGAAGATGGTATATCAAAGGAAATCAAGCAAAGGACTTCAGTCTTTGATCGCATTGAACCTTCAACTACTCAAACTTCGGTCTTTCAAAGAATGAGTATGGCTGCAGCAAGAGAAGAAGATCAAAGCTTGACGTCCGCCATCACTCGACATTCAGTTTTCCAAAGACTAAGCGTCTCTACATCAAGAAAGTGTCGACCTTCAACAACTGTTTTTGATCGCCTCAAAGTAAGAAGCAGCCAACGTGAAAGAAAGGTGGACAGTTCAGAAGTTAAATTATTCGATGAAGTACACAATGACAAGAAGCTTCATAGTACCATTTCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAAAAGGTTCCTTGAAGGTGAAACCAAATCTTGTCATTTTGACAAATCCTACAGATGAAGGATCTGATCAAGACTATGGTTCTCACGCGTTCCGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTTCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCGTTCTGCTACAGTTCCTTCTCTCCAAGTGTAAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTACGTTGCTTCCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGTTGCGCTTCGTTGCAGTTCTTTCCTCCAAGTTCGAAAGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCCTCACGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTTTCCAAGTTTGAAGGTGCTTCTCTCTGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAATGTGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCATCGTTGCTTCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCGTTCCACTCCATTTTCAAATGTTGGCAGTTGACGGCGTCCGCTGCGCTTCATCTTCAAATACAGGTGGTGAAATCACTGCAATTGAATCTGATGACGACCGTTGTAGGAGTCTGGTGACCACCCTTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGAGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCATGAGTGCATCACTGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGAGTGCATCACTGAAGGCGAATCTAGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATAGGGGACTGGTCTAGCAGGAGTGAAATAACTGCAATCGAATTTGGTGACGACTGTTGCACGATGCTTACACTCTCAAGCAATAAAGAAATAGATTGCAGTAATATGTGTGCAAATAAAAAGTACCAACACCATCGCCGCAAACCCATTTTATTTTACTTAACCTCCGCTTATCAAAACGCCGACAACTCTCAGGAAAGCAGCATCCTTACTTTCTTCACCGTAAAACCTTCGATCAATGTCCAATGGAGACCTATGGCGGTGGTGTATTCGCACGAACGCGGACTCGGCAACGACAACATTTTTGTTCTCTTCCTTCCGATTTCTTGCAATCTAACCGCGACGAGTCTTTTCCCTTCCTCTGACTGTCGTTCGACGTTAGTGGAAAGCTCAAGTGGGACACAAACAACGGCGGGGTATTCAACAACTCTACTGTTTGCACAAACCCACAATGATGGAACCTCCTCCCTCGATGCAACAAAACTGATGATCGACGATGTTGAGCCCATGTGA
Protein sequence
MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLTEVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEKNIEATIEESMVVNTTPLELSSKEKHKKIEKQQGNERRHLTLKERQKKIYPFPNSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRLAKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVLGDKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGCCSSERVNKHQRRKNPRKPKLEEKRDQSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYINIEEDGISKEIKQRTSVFDRIEPSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVRSSQRERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSVLINTKGSLKVKPNLVILTNPTDEGSDQDYGSHAFRYSSFSPSTKVLSSKSKVLTLLHCSSFLQVRSSFLQVRRFSCALLQFLLSKFKGSHAFCYSSFSPSVKVLSSKSKVLTLLHYSSFLQVRRFSRCFAVVPSLQVRRFSPPSRRFSTLLPAVPSSKFEGFEGSHALRFVAVLSSKFESSHALRCYLPPSSKVLSRAAAVPSPSSKVPHASLAPSPSSKVLLSTAPSPSSKALLSAAPFPSLKVLLSVAPSPSSKALLSTAPSPSSNVLLSTPPFEGSPLRFSFSKFEGSSLLLFKCLAAVDGLVPLHFQMLAVDGVRCASSSNTGGEITAIESDDDRCRSLVTTLAGYSDHPIKWDWSSRSASLKENLVTTPAGYSDHPIKWDWSSMSASLLLRSPNKMGTGLAGVHHCRQIWSASLKANLVTTPAGYSDHPIKWGLECITEGESSDYSCRLLRSPNKIGDWSSRSEITAIEFGDDCCTMLTLSSNKEIDCSNMCANKKYQHHRRKPILFYLTSAYQNADNSQESSILTFFTVKPSINVQWRPMAVVYSHERGLGNDNIFVLFLPISCNLTATSLFPSSDCRSTLVESSSGTQTTAGYSTTLLFAQTHNDGTSSLDATKLMIDDVEPM
Homology
BLAST of Lag0015166 vs. NCBI nr
Match:
TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 612.8 bits (1579), Expect = 6.1e-171
Identity = 346/604 (57.28%), Postives = 434/604 (71.85%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MPNGYQPPKFQQFDGKGNPKQH+AHFIETCE AGTRGDLLVKQFVRTLKGNAFD Y DLE
Sbjct: 202 MPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDLYMDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I +WEQLE++FLN FYSTRR VSM ELT+ +Q+KGE V+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSI +RG KD L+ + D+
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDFLIPKSRSDKN 381
Query: 181 NIEAT-------IEESMVVNTTPLELSSKEKHKKIE-KQQGNERRHLTLKERQKKIYPFP 240
+ T I+ESMVV+ TPL+ SK K KIE K G+E+R TLKERQ+K+YPF
Sbjct: 382 ELNDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFS 441
Query: 241 NSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRL 300
+SDV +MLEQLL+ +LI+LP+CKRP++ EKVDDPNYC YHRVISHPVEKCFVLKELIL+L
Sbjct: 442 DSDVADMLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKL 501
Query: 301 AKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVLG 360
A+E KIEL+++EVAQ+NH AI T + L DQ L+QFGT +I F ++
Sbjct: 502 AREKKIELNIDEVAQTNHVAIEM-TSNVPPLTQLDDQRKSLIQFGT----SILFQQRIVT 561
Query: 361 DKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQ----------KGCCSSERVNKHQRRKNP 420
SQ+ ++D+G +TR+K ++ + +Q KG S ++ K +R K
Sbjct: 562 INSQNKEAHGKDDDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKK--KGRRNKKM 621
Query: 421 RKPKLEEKRDQSPVRHCRLVTLKESFLRNF---HPVKKVEEHFVSSC-----------YI 480
PK + +D+ ++ R +TL E R+F HP + +E V++C Y
Sbjct: 622 WNPKPIKGKDEDFLQLRRSITLAEFLPRSFLEDHPEEILE---VTTCHAASIVEVNNNYG 681
Query: 481 NIEEDGISKEIKQRTSVFDRIEPSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLS 540
+ +E EI QRTSVFDRI+PSTT++SVFQR+SMA EE+Q T TR S F+RLS
Sbjct: 682 SSKEVNNLNEINQRTSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLS 741
Query: 541 VSTSRKCRPSTTVFDRLKVRSSQRERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSVL 573
+S S+K RPST+ FDRLK+ + Q++R++ S + K F E ++D K+HS + SRMKRK V
Sbjct: 742 ISASKKNRPSTSAFDRLKMTNDQQQREMKSLKAKPFREENDDDKIHSRVPSRMKRKLPVD 795
BLAST of Lag0015166 vs. NCBI nr
Match:
KAA0056121.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 595.9 bits (1535), Expect = 7.7e-166
Identity = 333/602 (55.32%), Postives = 413/602 (68.60%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MPNGYQPPKFQQFDGKGNPKQH+AHFI+TCE AGTRGDLLVKQFVRTLKGNA DWY DLE
Sbjct: 202 MPNGYQPPKFQQFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I +WEQLE++FLN FYSTR VSM ELT+ +Q+KGE V+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIDNWEQLERDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIA+RG KD L+ + D+
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKN 381
Query: 181 NIEAT-------IEESMVVNTTPLELSSKEKHKKIE-KQQGNERRHLTLKERQKKIYPFP 240
++ T I+ESMVV+ TPL+ SK K KIE K G+E+R TLKERQ+K+YPFP
Sbjct: 382 ELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFP 441
Query: 241 NSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRL 300
+SDV +MLEQLL+ +LI+LPECKRPE+ KVDDPNYC YHRVISHPVEKCFVLKELIL+L
Sbjct: 442 DSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKL 501
Query: 301 AKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVLG 360
A+E KIELD++EVAQ+NHA
Sbjct: 502 AREKKIELDIDEVAQTNHA----------------------------------------- 561
Query: 361 DKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGCCSSERVNKHQRRKNPRKPKLEEKRD 420
+ + +N KG K ++ +++ +E + PR ++ +
Sbjct: 562 ------IEMTSNPIKG-------KDEDFLQLRRSITLAEFL--------PRSFLEDDPEE 621
Query: 421 QSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYINIEEDGISKEIKQRTSVFDRIEPS 480
V C ++ E V+ ++ SS +N S EI QRTSVFDRI+PS
Sbjct: 622 ILEVTACHAASIVE-----------VDNNYGSSKEVN-----NSNEINQRTSVFDRIKPS 681
Query: 481 TTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVRSSQR 540
TT++SVFQR+S+A EE+Q T TR S +RLS+ST +K RPST+ FDRLK+ + Q+
Sbjct: 682 TTRSSVFQRLSVATKEEENQCPTFIYTRTSTSKRLSISTLKKDRPSTSSFDRLKMTNDQQ 725
Query: 541 ERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSVLINTKGSLKVKPNLVILTNPTDEGS 595
+R++ SS+ K F E ++D K+HS + SRMKRK V INT+GSL VKP +I TNPT+EG
Sbjct: 742 QREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFTNPTNEGD 725
BLAST of Lag0015166 vs. NCBI nr
Match:
KAA0033746.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 575.9 bits (1483), Expect = 8.3e-160
Identity = 333/627 (53.11%), Postives = 419/627 (66.83%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MP GYQPPKFQQFDGKGNPKQHIAHF+ETCENAG+RGD LV+QFVR+LKGNAF+WYTDLE
Sbjct: 202 MPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE GEPV+DYINRWRALSLDCKD+LT
Sbjct: 262 PE-----------------------------------GEPVIDYINRWRALSLDCKDKLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHWELLYILQGIKPRTFEEL+TRAHDMELSIA+ G KD L+ K+ +K
Sbjct: 322 ELSAVEMCTQGMHWELLYILQGIKPRTFEELSTRAHDMELSIANIGAKDFLVQRTKRSDK 381
Query: 181 N--------IEATIEESMVVNTTPLELSSKEKHKKIEKQ-QGNERRHLTLKERQKKIYPF 240
N + ESM+V TPL+ SK K K E+ G+E+R TL+ERQKK+YPF
Sbjct: 382 NEINDTKKIANNILNESMLVQETPLKSFSKRKETKHERNYDGDEKRRPTLRERQKKVYPF 441
Query: 241 PNSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILR 300
P+SDV +MLEQL++ +LI+LPECKRPE+ KVDDPNYC YHRVISHPVEKCFVLKELIL+
Sbjct: 442 PDSDVADMLEQLIEKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK 501
Query: 301 LAKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVL 360
LA+E KIELD++EVAQ+NH A+ T S + L+DQ L+QFGT EPI + F + +
Sbjct: 502 LARENKIELDIDEVAQTNHVAV-NMTSSVLPSILLYDQRESLIQFGTFEPILVRFQQKTM 561
Query: 361 GDKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQ----------KGCCSSERVNKHQRRKN 420
SQ+ +E + +T KK+++ VQ KG S ++ K +R K
Sbjct: 562 TSNSQNKEETSEDEGEEWIGVTHKKERQIGSVQTNSNFHQKHSKGNISHKK--KGRRNKK 621
Query: 421 PRKPKLEEKRDQSPVRHCRLVTLKESFLRNF---HPVKKVEEHFVSSC-----------Y 480
KPK + +D+ + R + L E R+F HP K +E V++C Y
Sbjct: 622 MWKPKPIKGKDKDFFQPRRSINLAEFLPRSFLEDHPEKILE---VTACHTTSIVEVDNNY 681
Query: 481 INIEEDGISKEIKQRTSVFDRIEPSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRL 540
+ EE S EIKQRT VF RI+P T ++SVFQR+SMA EE+Q TS R S F+RL
Sbjct: 682 DSYEEVDNSNEIKQRTFVFHRIKPLTIRSSVFQRLSMAMKEEENQCPTSTYARTSAFKRL 741
Query: 541 SVSTSRKCRPSTTVFDRLKVRSSQRERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSV 595
S+ST +K RPST+ FDRLK+ + Q++R++ S + K F E ++D K+HS + SRMKRK SV
Sbjct: 742 SISTLKKDRPSTSAFDRLKMINDQQQREMKSLKEKPFHEENDDDKIHSRVPSRMKRKLSV 787
BLAST of Lag0015166 vs. NCBI nr
Match:
XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])
HSP 1 Score: 550.8 bits (1418), Expect = 2.9e-152
Identity = 303/541 (56.01%), Postives = 385/541 (71.16%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MP GYQPPKFQQFDGKGNPKQH+AHF+ETCENAG+RGD LV+QFVR+LKGNAF+WYTDLE
Sbjct: 202 MPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I SWEQLEKEFLN FYSTRRTVSM ELT+ KQRKGEPV+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKD-- 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIASRG KD L+ +KKD
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKKDKK 381
Query: 181 -----EKNIEATIEESMVVNTTPLELSSKEKHKKIEKQQGNERRHLTLKERQKKIYPFPN 240
EK +++T++ESMVVNTTPL+ S ++ + +K G+ERR LTLKERQ+K+YPFP+
Sbjct: 382 EMKGAEKIVKSTLKESMVVNTTPLKFSKGKEARVEKKDDGSERRRLTLKERQEKVYPFPD 441
Query: 241 SDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRLA 300
SD+ +MLEQLL+ +LI+LPECKRPE+ KVDDPNYC YHRVISHPVEKCFVLKELILRLA
Sbjct: 442 SDIADMLEQLLEKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLA 501
Query: 301 KEGKIELDLEEVAQSNHAAI---ATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEV 360
+E +IELDLEEVAQ+NHA + + + S++ F +Q LVQFGT EPI + F E+
Sbjct: 502 REKRIELDLEEVAQTNHAEVTIMSEASSSRLIF----EQRKSLVQFGTFEPIVVQFFQEI 561
Query: 361 LGDKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGCCS------SERVNKHQRRKNPRK 420
+ Q + +D+G ++T +KK++ Q+ S + K++++K K
Sbjct: 562 SYEDPQGEKRPIEEDDEGWIVVTHRKKRQSIPTQRESRSYQNYRRGNKTQKNKKKKKTHK 621
Query: 421 PKLEEKRDQSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYI------------NIEE 480
KL D + R RLVTL + ++F + E+ V +C+ ++E
Sbjct: 622 LKLVHNEDMNFSRPQRLVTLADFLPKSFLCDHQDEDPEVVACHAINTTEEEIIPPRSLEG 681
Query: 481 DGISKEIKQRTSVFDRIE-PSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLSVST 513
+G+SK++ R +V D + P T+T + + + A S T +T S +S+
Sbjct: 682 EGVSKDL-SRFNVEDLLSLPQETKTILIDALLNSRA---SSSSTPTMTYESGSYCMSIDF 734
BLAST of Lag0015166 vs. NCBI nr
Match:
XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])
HSP 1 Score: 549.7 bits (1415), Expect = 6.4e-152
Identity = 303/541 (56.01%), Postives = 384/541 (70.98%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MP GYQPPKFQQFDGKGNPKQH+AHF+ETCENAG+RGD LV+QFVR+LKGNAF+WYTDLE
Sbjct: 202 MPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I SWEQLEKEFLN FYSTRRTVSM ELT+ KQRKGEPV+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKD-- 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIASRG KD L+ +KKD
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKKDKK 381
Query: 181 -----EKNIEATIEESMVVNTTPLELSSKEKHKKIEKQQGNERRHLTLKERQKKIYPFPN 240
EK +++T +ESMVVNTTPL+ S ++ + +K G+ERR LTLKERQ+K+YPFP+
Sbjct: 382 EMKGAEKIVKSTAKESMVVNTTPLKFSKGKEARVEKKDDGSERRRLTLKERQEKVYPFPD 441
Query: 241 SDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRLA 300
SD+ +MLEQLL+ +LI+LPECKRPE+ KVDDPNYC YHRVISHPVEKCFVLKELILRLA
Sbjct: 442 SDIADMLEQLLEKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLA 501
Query: 301 KEGKIELDLEEVAQSNHAAI---ATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEV 360
+E +IELDLEEVAQ+NHA + + + S++ F +Q LVQFGT EPI + F E+
Sbjct: 502 REKRIELDLEEVAQTNHAEVTIMSEASSSRLIF----EQRKSLVQFGTFEPIVVQFFQEI 561
Query: 361 LGDKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGCCS------SERVNKHQRRKNPRK 420
+ Q + +D+G ++T +KK++ Q+ S + K++++K K
Sbjct: 562 SYEDPQGEKRPIEEDDEGWIVVTHRKKRQSIPTQRESRSYQNYRRGNKTQKNKKKKKTHK 621
Query: 421 PKLEEKRDQSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYI------------NIEE 480
KL D + R RLVTL + ++F + E+ V +C+ ++E
Sbjct: 622 LKLVHNEDMNFSRPQRLVTLADFLPKSFLCDHQDEDPEVVACHAINTTEEEIIPPRSLEG 681
Query: 481 DGISKEIKQRTSVFDRIE-PSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLSVST 513
+G+SK++ R +V D + P T+T + + + A S T +T S +S+
Sbjct: 682 EGVSKDL-SRFNVEDLLSLPQETKTILIDALLNSRA---SSSSTPTMTYESGSYCMSIDF 734
BLAST of Lag0015166 vs. ExPASy TrEMBL
Match:
A0A5D3BX77 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00570 PE=4 SV=1)
HSP 1 Score: 612.8 bits (1579), Expect = 3.0e-171
Identity = 346/604 (57.28%), Postives = 434/604 (71.85%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MPNGYQPPKFQQFDGKGNPKQH+AHFIETCE AGTRGDLLVKQFVRTLKGNAFD Y DLE
Sbjct: 202 MPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDLYMDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I +WEQLE++FLN FYSTRR VSM ELT+ +Q+KGE V+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSI +RG KD L+ + D+
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDFLIPKSRSDKN 381
Query: 181 NIEAT-------IEESMVVNTTPLELSSKEKHKKIE-KQQGNERRHLTLKERQKKIYPFP 240
+ T I+ESMVV+ TPL+ SK K KIE K G+E+R TLKERQ+K+YPF
Sbjct: 382 ELNDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFS 441
Query: 241 NSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRL 300
+SDV +MLEQLL+ +LI+LP+CKRP++ EKVDDPNYC YHRVISHPVEKCFVLKELIL+L
Sbjct: 442 DSDVADMLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKL 501
Query: 301 AKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVLG 360
A+E KIEL+++EVAQ+NH AI T + L DQ L+QFGT +I F ++
Sbjct: 502 AREKKIELNIDEVAQTNHVAIEM-TSNVPPLTQLDDQRKSLIQFGT----SILFQQRIVT 561
Query: 361 DKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQ----------KGCCSSERVNKHQRRKNP 420
SQ+ ++D+G +TR+K ++ + +Q KG S ++ K +R K
Sbjct: 562 INSQNKEAHGKDDDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKK--KGRRNKKM 621
Query: 421 RKPKLEEKRDQSPVRHCRLVTLKESFLRNF---HPVKKVEEHFVSSC-----------YI 480
PK + +D+ ++ R +TL E R+F HP + +E V++C Y
Sbjct: 622 WNPKPIKGKDEDFLQLRRSITLAEFLPRSFLEDHPEEILE---VTTCHAASIVEVNNNYG 681
Query: 481 NIEEDGISKEIKQRTSVFDRIEPSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLS 540
+ +E EI QRTSVFDRI+PSTT++SVFQR+SMA EE+Q T TR S F+RLS
Sbjct: 682 SSKEVNNLNEINQRTSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLS 741
Query: 541 VSTSRKCRPSTTVFDRLKVRSSQRERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSVL 573
+S S+K RPST+ FDRLK+ + Q++R++ S + K F E ++D K+HS + SRMKRK V
Sbjct: 742 ISASKKNRPSTSAFDRLKMTNDQQQREMKSLKAKPFREENDDDKIHSRVPSRMKRKLPVD 795
BLAST of Lag0015166 vs. ExPASy TrEMBL
Match:
A0A5A7URH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17350G00010 PE=4 SV=1)
HSP 1 Score: 595.9 bits (1535), Expect = 3.8e-166
Identity = 333/602 (55.32%), Postives = 413/602 (68.60%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MPNGYQPPKFQQFDGKGNPKQH+AHFI+TCE AGTRGDLLVKQFVRTLKGNA DWY DLE
Sbjct: 202 MPNGYQPPKFQQFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I +WEQLE++FLN FYSTR VSM ELT+ +Q+KGE V+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIDNWEQLERDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIA+RG KD L+ + D+
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKN 381
Query: 181 NIEAT-------IEESMVVNTTPLELSSKEKHKKIE-KQQGNERRHLTLKERQKKIYPFP 240
++ T I+ESMVV+ TPL+ SK K KIE K G+E+R TLKERQ+K+YPFP
Sbjct: 382 ELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFP 441
Query: 241 NSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRL 300
+SDV +MLEQLL+ +LI+LPECKRPE+ KVDDPNYC YHRVISHPVEKCFVLKELIL+L
Sbjct: 442 DSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKL 501
Query: 301 AKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVLG 360
A+E KIELD++EVAQ+NHA
Sbjct: 502 AREKKIELDIDEVAQTNHA----------------------------------------- 561
Query: 361 DKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGCCSSERVNKHQRRKNPRKPKLEEKRD 420
+ + +N KG K ++ +++ +E + PR ++ +
Sbjct: 562 ------IEMTSNPIKG-------KDEDFLQLRRSITLAEFL--------PRSFLEDDPEE 621
Query: 421 QSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYINIEEDGISKEIKQRTSVFDRIEPS 480
V C ++ E V+ ++ SS +N S EI QRTSVFDRI+PS
Sbjct: 622 ILEVTACHAASIVE-----------VDNNYGSSKEVN-----NSNEINQRTSVFDRIKPS 681
Query: 481 TTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVRSSQR 540
TT++SVFQR+S+A EE+Q T TR S +RLS+ST +K RPST+ FDRLK+ + Q+
Sbjct: 682 TTRSSVFQRLSVATKEEENQCPTFIYTRTSTSKRLSISTLKKDRPSTSSFDRLKMTNDQQ 725
Query: 541 ERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSVLINTKGSLKVKPNLVILTNPTDEGS 595
+R++ SS+ K F E ++D K+HS + SRMKRK V INT+GSL VKP +I TNPT+EG
Sbjct: 742 QREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFTNPTNEGD 725
BLAST of Lag0015166 vs. ExPASy TrEMBL
Match:
A0A5A7SUW1 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G002250 PE=4 SV=1)
HSP 1 Score: 575.9 bits (1483), Expect = 4.0e-160
Identity = 333/627 (53.11%), Postives = 419/627 (66.83%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MP GYQPPKFQQFDGKGNPKQHIAHF+ETCENAG+RGD LV+QFVR+LKGNAF+WYTDLE
Sbjct: 202 MPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE GEPV+DYINRWRALSLDCKD+LT
Sbjct: 262 PE-----------------------------------GEPVIDYINRWRALSLDCKDKLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHWELLYILQGIKPRTFEEL+TRAHDMELSIA+ G KD L+ K+ +K
Sbjct: 322 ELSAVEMCTQGMHWELLYILQGIKPRTFEELSTRAHDMELSIANIGAKDFLVQRTKRSDK 381
Query: 181 N--------IEATIEESMVVNTTPLELSSKEKHKKIEKQ-QGNERRHLTLKERQKKIYPF 240
N + ESM+V TPL+ SK K K E+ G+E+R TL+ERQKK+YPF
Sbjct: 382 NEINDTKKIANNILNESMLVQETPLKSFSKRKETKHERNYDGDEKRRPTLRERQKKVYPF 441
Query: 241 PNSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILR 300
P+SDV +MLEQL++ +LI+LPECKRPE+ KVDDPNYC YHRVISHPVEKCFVLKELIL+
Sbjct: 442 PDSDVADMLEQLIEKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK 501
Query: 301 LAKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVL 360
LA+E KIELD++EVAQ+NH A+ T S + L+DQ L+QFGT EPI + F + +
Sbjct: 502 LARENKIELDIDEVAQTNHVAV-NMTSSVLPSILLYDQRESLIQFGTFEPILVRFQQKTM 561
Query: 361 GDKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQ----------KGCCSSERVNKHQRRKN 420
SQ+ +E + +T KK+++ VQ KG S ++ K +R K
Sbjct: 562 TSNSQNKEETSEDEGEEWIGVTHKKERQIGSVQTNSNFHQKHSKGNISHKK--KGRRNKK 621
Query: 421 PRKPKLEEKRDQSPVRHCRLVTLKESFLRNF---HPVKKVEEHFVSSC-----------Y 480
KPK + +D+ + R + L E R+F HP K +E V++C Y
Sbjct: 622 MWKPKPIKGKDKDFFQPRRSINLAEFLPRSFLEDHPEKILE---VTACHTTSIVEVDNNY 681
Query: 481 INIEEDGISKEIKQRTSVFDRIEPSTTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRL 540
+ EE S EIKQRT VF RI+P T ++SVFQR+SMA EE+Q TS R S F+RL
Sbjct: 682 DSYEEVDNSNEIKQRTFVFHRIKPLTIRSSVFQRLSMAMKEEENQCPTSTYARTSAFKRL 741
Query: 541 SVSTSRKCRPSTTVFDRLKVRSSQRERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSV 595
S+ST +K RPST+ FDRLK+ + Q++R++ S + K F E ++D K+HS + SRMKRK SV
Sbjct: 742 SISTLKKDRPSTSAFDRLKMINDQQQREMKSLKEKPFHEENDDDKIHSRVPSRMKRKLSV 787
BLAST of Lag0015166 vs. ExPASy TrEMBL
Match:
A0A5A7SRE2 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00210 PE=4 SV=1)
HSP 1 Score: 543.1 bits (1398), Expect = 2.9e-150
Identity = 315/602 (52.33%), Postives = 394/602 (65.45%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MP GYQP KFQQFDGKGNPKQHI HF+ETCENAG+RGD LV+QFVR+LKGNAF+
Sbjct: 202 MPLGYQPLKFQQFDGKGNPKQHIVHFVETCENAGSRGDQLVRQFVRSLKGNAFE------ 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
TRR VSM ELT+ QRKGEPV+DYINRWRALSLDCKD+LT
Sbjct: 262 -------------------CTRRVVSMMELTNT-QRKGEPVIDYINRWRALSLDCKDKLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHWELLYILQGIKPRTFEELATRAHDM+LSIA+RG KD L+ + D+
Sbjct: 322 ELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMKLSIANRGVKDFLVQRTRSDKN 381
Query: 181 NIEAT-------IEESMVVNTTPLELSSKEKHKKIEK-QQGNERRHLTLKERQKKIYPFP 240
I T + ESM+V TPL+ SK K K ++ G+E+R TL+ERQKK+YPFP
Sbjct: 382 EINDTKKIANNVLNESMLVQETPLKSFSKRKETKHKRNHDGDEKRRPTLRERQKKVYPFP 441
Query: 241 NSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRL 300
+SDV +MLEQL++ +LI+LPECKRPE++ KVDDPNYC YHRVISH VEKCFVLKELI +L
Sbjct: 442 DSDVADMLEQLIEKQLIQLPECKRPEQVGKVDDPNYCKYHRVISHLVEKCFVLKELIRKL 501
Query: 301 AKEGKIELDLEEVAQSNHAAIATNTCSQMCFGSLHDQEVHLVQFGTIEPIAIWFHHEVLG 360
A+E KIELD++EVAQ+NH A+ T S L+DQ L+QFGT EPI + F + +
Sbjct: 502 ARENKIELDIDEVAQTNHVAV-NMTSSVPLSILLYDQRKSLIQFGTFEPILVRFQQKTMT 561
Query: 361 DKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGCCSSERVNKHQRRKNPRKPKLEEKRD 420
SQ+ K+E SE + PR + +
Sbjct: 562 SNSQN-------------------KEE---------PSEDEGEEWIEFLPRSFLEDHPEE 621
Query: 421 QSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYINIEEDGISKEIKQRTSVFDRIEPS 480
V C ++ E V + Y + EE S EIKQRTSVFD I+P
Sbjct: 622 ILEVTACHTTSIVE----------------VDNNYDSYEEMDNSNEIKQRTSVFDCIKPL 681
Query: 481 TTQTSVFQRMSMAAAREEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVRSSQR 540
TT++SVFQR+SMA +EE+Q T + S F+RLS+S S+K RPST FDRLK+ + Q+
Sbjct: 682 TTRSSVFQRLSMATKKEENQCPTFTYAQTSAFKRLSISISKKHRPSTYTFDRLKMTNDQQ 732
Query: 541 ERKVDSSEVKLFDEVHNDKKLHSTISSRMKRKFSVLINTKGSLKVKPNLVILTNPTDEGS 595
+R++ + + K F E ++D K+HS + SRMKRK SV INT+GSL VKP +I TNP +EG
Sbjct: 742 QREMKTLKAKPFQEENDDDKIHSRVPSRMKRKLSVDINTEGSLTVKPRFIIFTNPINEGD 732
BLAST of Lag0015166 vs. ExPASy TrEMBL
Match:
A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)
HSP 1 Score: 536.6 bits (1381), Expect = 2.7e-148
Identity = 292/486 (60.08%), Postives = 366/486 (75.31%), Query Frame = 0
Query: 1 MPNGYQPPKFQQFDGKGNPKQHIAHFIETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLE 60
MP+GYQPPKFQQFDGKGNPKQH+AHFIETCE AGTRGDLLVKQFVRTLKGNAFDWYTDLE
Sbjct: 202 MPHGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLE 261
Query: 61 PETIGSWEQLEKEFLNHFYSTRRTVSMTELTSAKQRKGEPVVDYINRWRALSLDCKDRLT 120
PE+I SWEQLE++FLN FYSTRR VSM ELT+ KQRKGEPV+DYINRWRALSLDCKDRLT
Sbjct: 262 PESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDYINRWRALSLDCKDRLT 321
Query: 121 EVSSVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIASRGDKDLLLSNMKKDEK 180
E+S+VEMCTQGMHW LLYILQGIKPRTFEELATRAHDMELSIA+RG+ DLL+ ++K++K
Sbjct: 322 ELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGNNDLLVPEVRKEKK 381
Query: 181 NIEAT-------IEESMVVNTTPLELSSKEKHKKIEKQQG-NERRHLTLKERQKKIYPFP 240
+++T +E+MVV+TTPL+L SKE KK+EK+Q E+R TLKERQ+K+YPFP
Sbjct: 382 EVKSTQKALKGVTKEAMVVSTTPLKLVSKE--KKMEKRQDEGEKRRPTLKERQEKVYPFP 441
Query: 241 NSDVPNMLEQLLKTRLIELPECKRPEEIEKVDDPNYCMYHRVISHPVEKCFVLKELILRL 300
+SD+P+ML+QLL+ +LI+LPECKRP E+ +V+DPNYC YHRVISHPVEKCFVLKELIL+L
Sbjct: 442 DSDLPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKL 501
Query: 301 AKEGKIELDLEEVAQSNHAAIATNTCSQM-CFGSLHDQEVHLVQFGTIEPIAIWFHHEVL 360
A + KIEL+L++VAQ+NHAA+ + S++ GS L+QFG++EP+ I+ E L
Sbjct: 502 ALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGS-------LIQFGSLEPVVIYSSPEDL 561
Query: 361 ------GDKSQDPVNLVNNEDKGSTIMTRKKKQERHLVQKGC------CSSERVNKHQRR 420
D ++ V+N ++G T++TR+KK+++ QK S + + R
Sbjct: 562 QNNDFRADGPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTR 621
Query: 421 KNPRK--PKLEEKRDQSPVRHCRLVTLKESFLRNFHPVKKVEEHFVSSCYINIEEDGISK 464
KNPRK P +EE S R R + LK+ F +NF P++ V H S+ EED
Sbjct: 622 KNPRKFLPIIEESEGLSRPR--RPIILKDFFPKNF-PMEIVSCHTTST----TEEDACPS 671
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK03695.1 | 6.1e-171 | 57.28 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
KAA0056121.1 | 7.7e-166 | 55.32 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0033746.1 | 8.3e-160 | 53.11 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
XP_031742032.1 | 2.9e-152 | 56.01 | uncharacterized protein LOC116404025 [Cucumis sativus] | [more] |
XP_031739134.1 | 6.4e-152 | 56.01 | uncharacterized protein LOC116402863 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BX77 | 3.0e-171 | 57.28 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A5A7URH1 | 3.8e-166 | 55.32 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7SUW1 | 4.0e-160 | 53.11 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... | [more] |
A0A5A7SRE2 | 2.9e-150 | 52.33 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7TZU9 | 2.7e-148 | 60.08 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... | [more] |
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Match Name | E-value | Identity | Description | |