Lag0015154 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015154
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	AAI domain-containing protein
Location	chr12: 8182197 .. 8183139 (-)
RNA-Seq Expression	Lag0015154
Synteny	Lag0015154

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCTCAAAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCTGGGATAAATACAGCAGCTTGAGGAGCAAAAAAACAAGCAACAAAGAAATGTTCAAACAGAAAGTGAGTCCGCACATAAGCCCAACTACAAAGCAAGCAAATAGCATAAGGAAGCTGGTCGACGTCATGGCAAGGTCGAGGCCGACCACCTGGAGGCCAAGTCCAAAATTCAGCCACAAAAGCCCAGCACATGTCCATCGTTTTTCCCCATGGTACAATGTAGACGCTTGCAAATTTAATAACGTTCTTTATACTATGTTTGTACCAGACATTTTTCCATAGGATGTAGCGCATGTGGCCAGACGAGAATGATTCTTGCAAAGGCTAAACTTCCGCACTTTCCCTTGGAAAGAGACTAAACTCCTGCAGAGAGGTTGACGCATGCCCTCAACCTCCCCAAGTTTTCCCTAGAATAGTGTATGCACCCCTGGGATGAACACACCAAGGCAGGTTAGCAAGCAAAACAGAAGAAATGCTCGGCCTCATGCCAAGGCCGAGGCCGAGCATCCCAACTCCGAAGCCAACCCTCAGGCACACATTCAAAGCAGAGTGACTGGTTCGAGTTCTCAGTCACTTCACTTTTTAGCACAACTGAAGCGCTCAAAGCCGTAG

mRNA sequence

ATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCTCAAAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTTAGCAAGCAAAACAGAAGAAATGCTCGGCCTCATGCCAAGGCCGAGGCCGAGCATCCCAACTCCGAAGCCAACCCTCAGGCACACATTCAAAGCAGAGTGACTGGTTCGAGTTCTCAGTCACTTCACTTTTTAGCACAACTGAAGCGCTCAAAGCCGTAG

Coding sequence (CDS)

ATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCTCAAAAGAGTGTACGCACCCCCGGGATGACGACGATGCTTGAAGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCTCGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTTAGCAAGCAAAACAGAAGAAATGCTCGGCCTCATGCCAAGGCCGAGGCCGAGCATCCCAACTCCGAAGCCAACCCTCAGGCACACATTCAAAGCAGAGTGACTGGTTCGAGTTCTCAGTCACTTCACTTTTTAGCACAACTGAAGCGCTCAAAGCCGTAG

Protein sequence

MTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFLGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVSKQNRRNARPHAKAEAEHPNSEANPQAHIQSRVTGSSSQSLHFLAQLKRSKP

Homology

[Close]

BLAST of Lag0015154 vs. NCBI nr
Match: XP_032924805.1 (proline-rich protein 36-like [Catharus ustulatus])

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-04
Identity = 36/136 (26.47%), Postives = 61/136 (44.85%), Query Frame = 0


Query: 2   TTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTML 61
           TT+L E     P    + P+ S+ TP  TT+L +     P    + P+ S+ TP  TT+L
Sbjct: 579 TTVLPENSITTPSTTTVLPENSITTPSTTTVLPDNSITTPSTTTVLPENSITTPSTTTVL 638

Query: 62  EERLGKFLGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVSKQNRRNARPHAK 121
            +          + P+ S+ TP  TT+L E     P    + P+ S++  +     P  K
Sbjct: 639 PDNSITTPSTTTVLPENSITTPSTTTVLPENSITTPSTATVLPENSITTPSTATVLP--K 698

Query: 122 AEAEHPNSEANPQAHI 138
                P++ + P++ I
Sbjct: 699 VSITTPSTISVPRSFI 712

[Close]

BLAST of Lag0015154 vs. NCBI nr
Match: XP_015634713.1 (protein PELPK1 [Oryza sativa Japonica Group])

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-04
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 13  PGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFLGLP 72
           PGLP L P  +++ PG+  + +    + PGLP L P  +++ PG+  + +    +  GLP
Sbjct: 71  PGLPPLPPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAIQIPGLPPLPQLPTIQIPGLP 130

Query: 73  KLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSV 109
            L P  +++ PG+  + +    + PGLP L P  ++
Sbjct: 131 TLQPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAI 166

[Close]

BLAST of Lag0015154 vs. NCBI nr
Match: CAD39491.2 (OSJNBa0039G19.6 [Oryza sativa Japonica Group])

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-04
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 13  PGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFLGLP 72
           PGLP L P  +++ PG+  + +    + PGLP L P  +++ PG+  + +    +  GLP
Sbjct: 71  PGLPPLPPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAIQIPGLPPLPQLPTIQIPGLP 130

Query: 73  KLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSV 109
            L P  +++ PG+  + +    + PGLP L P  ++
Sbjct: 131 TLQPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAI 166

[Close]

BLAST of Lag0015154 vs. NCBI nr
Match: KAF2932811.1 (hypothetical protein DAI22_04g028200 [Oryza sativa Japonica Group])

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-04
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 13  PGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFLGLP 72
           PGLP L P  +++ PG+  + +    + PGLP L P  +++ PG+  + +    +  GLP
Sbjct: 73  PGLPPLPPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAIQIPGLPPLPQLPTIQIPGLP 132

Query: 73  KLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSV 109
            L P  +++ PG+  + +    + PGLP L P  ++
Sbjct: 133 TLQPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAI 168

[Close]

BLAST of Lag0015154 vs. NCBI nr
Match: EAZ29954.1 (hypothetical protein OsJ_14008 [Oryza sativa Japonica Group] >BAS87925.1 Os04g0174500 [Oryza sativa Japonica Group])

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-04
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 13  PGLPKLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSVRTPGMTTMLEERLGKFLGLP 72
           PGLP L P  +++ PG+  + +    + PGLP L P  +++ PG+  + +    +  GLP
Sbjct: 71  PGLPPLPPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAIQIPGLPPLPQLPTIQIPGLP 130

Query: 73  KLFPQKSVRTPGMTTMLEERLGKFPGLPKLFPQKSV 109
            L P  +++ PG+  + +    + PGLP L P  ++
Sbjct: 131 TLQPLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAI 166

The following BLAST results are available for this feature:

BLAST of Lag0015154 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_032924805.1	1.3e-04	26.47	proline-rich protein 36-like [Catharus ustulatus]	[more]
XP_015634713.1	2.3e-04	30.21	protein PELPK1 [Oryza sativa Japonica Group]	[more]
CAD39491.2	2.3e-04	30.21	OSJNBa0039G19.6 [Oryza sativa Japonica Group]	[more]
KAF2932811.1	2.3e-04	30.21	hypothetical protein DAI22_04g028200 [Oryza sativa Japonica Group]	[more]
EAZ29954.1	2.3e-04	30.21	hypothetical protein OsJ_14008 [Oryza sativa Japonica Group] >BAS87925.1 Os04g01...	[more]

BLAST of Lag0015154 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015154.1	Lag0015154.1	mRNA