Lag0014891 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGCAGCAGTGAATGCCCCTGCAAAGAGGAAGCCTGTCTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACGAGTGGCCACACTCTCACGGTCAAGGTTGTGAGCTCCAAAAATGTCAAGGTGGTCAATAAAGGTGGACGATCCGCCATGCTTACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGGTATGTTTCTCTGCAGCCATAAAAGTATTTGTTAGCCTAATTTTTCTCATCTTTTGGATGTCTCCATGTGTACGGTCATGAAAAAACATTGGATAGAATGGATGGATACTAGTTTCCTTTTTCTTTGCTGTGAGTGAGAATTCTTTTGAATAGTGAGTGATTTTCTTTTTTGTTTATGAATTTCATCTTCGTGCCTCGTGAATTTAGTATTCTTCTCTGTAGCTTTTGTTTTTTTTATAACTAGCAATAGAAACTTTTCCTTGATAATAGAGAAGTTACTCCCTTCAGGGGTATTCTGAAAGGTCGCCCATCAAAGAAACCTCCTTTTATAGTTACTAGAAGGTGCCCCAACAAAAATTTATTTAAGCTTATAGTGACTCGTCTGTGCTGAACCACCCTGGATCTTTTGCTCTGTTAATTTTTTTTGAATGGATGTGTTCTAATATAAATAGAATTTGGGTGTTGAGATAATTGTATAACAAGGAGTGGTATCAAAGCTAGGGTCTTATCTAATGGAGGTATCTCAATCAATCAATGAGACTCAAGAAAACTTTAAATGACTTTAACAAGGTTTAAAATAGAAATGCTTTTTTGAGCCGAAGACTTTTAATCTATGGAGGAAGAATGTGTGTGATTGTTGTTCAATATAAGTTCGGAAGATTCCAGCAGATTTGAAGGGTTTCTTAGATACCTTGATTTGAGGGTGCAAAGGAAACTACATTGTTGAATTTTGAAACAGACTACCTGGAATTCTTTTAGGGAAGAGTGTCTCTAGTTCTAGCTCTTGAATGGAGCTTGAGGACAGTTAGTGTATGAGTTTTCTGGTCCGTGAGTTTCTTCTTTATTATTTCTGGAGCAAGTCATCCTCTCTGAGGTATGAGGGATGTTATTGGTCAAGATAGAGCTCATTTTTGTTCATCTTCTGTAAATCAGGAGCTTTGAGATAGTGGATTAAGGTGTATGGGTGCAGACACCCTTTATGTCTCACCTATGCTTCTTCTGACTTAAAATCTGCTGTTAATTTAATTGCATAGCCGTTTCTATATCTCTTGCCTTGAACGTAGTGATTGGTGTTTTTGGCTCTGCATGGTTATAAGAACCTATGGCAATCCATTTGTGGGTTTGGGTGGAAGAGGACAAGGAACCAGCCCTTCTTCACAGTCATCTTGTTCGTTATCTTGGCTGTTAGAGAAGTTGTTTACTATTTTTATGGTATATGTATGCTCTGTTTAGCGGATTTTCAACAACCAATGTACTTTTCAACATTCTTTTGCATAAAAAAGCTATTCTGAAGCTGGATGGTGACATTTTTTTATTTTTGGTTTTTGAGATGAATGCAATGTACATTTATTTTTTTAGATTAGTGGGACAGTCATCCTAATTAGAAAAAAAGACCTGAGTGTGTAAGTCTTACTTGAGTTTGTGTTGGGGATAAAATTTGTTCATTATTTGGGGATTAGTCACATTCTGAGGCTGGGCGGTCATGTATTTGAGTTTGTGCTCGATTTCAGGTTTTTGTGTATGTTGTAGAGAGGCAGTGGAGTAATCTTCAATCCTTATGGTGTTCTGTTGTCTAATTAAACAAATGGTTGTAACTTTTGCAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGACGAATTGAAGTTGCTGAACCAGCTAACTTTGAAGTTAAAGAAGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTCGAAGAGTGA ATGGCGACGGCAGCAGTGAATGCCCCTGCAAAGAGGAAGCCTGTCTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACGAGTGGCCACACTCTCACGGTCAAGGTTGTGAGCTCCAAAAATGTCAAGGTGGTCAATAAAGGTGGACGATCCGCCATGCTTACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGACGAATTGAAGTTGCTGAACCAGCTAACTTTGAAGTTAAAGAAGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTCGAAGAGTGA ATGGCGACGGCAGCAGTGAATGCCCCTGCAAAGAGGAAGCCTGTCTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACGAGTGGCCACACTCTCACGGTCAAGGTTGTGAGCTCCAAAAATGTCAAGGTGGTCAATAAAGGTGGACGATCCGCCATGCTTACGGCTCGCCCTCAGCAATTAACTCGTATCTCTGAATGTCTTGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTTAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGACGAATTGAAGTTGCTGAACCAGCTAACTTTGAAGTTAAAGAAGACAACAATCTCTCTCTGGTTGAATATGAATTAGTTAACGTCGAAGAGTGA MATAAVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSAMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRIEVAEPANFEVKEDNNLSLVEYELVNVEE Homology
BLAST of Lag0014891 vs. NCBI nr
Match: XP_022136009.1 (uncharacterized protein At4g28440-like [Momordica charantia]) HSP 1 Score: 278.1 bits (710), Expect = 4.3e-71 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of Lag0014891 vs. NCBI nr
Match: XP_038887250.1 (uncharacterized protein At4g28440-like [Benincasa hispida]) HSP 1 Score: 277.3 bits (708), Expect = 7.4e-71 Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of Lag0014891 vs. NCBI nr
Match: XP_008455497.1 (PREDICTED: uncharacterized protein At4g28440 [Cucumis melo] >KAA0059117.1 uncharacterized protein E6C27_scaffold430G00240 [Cucumis melo var. makuwa] >TYK21622.1 uncharacterized protein E5676_scaffold150G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Lag0014891 vs. NCBI nr
Match: XP_004144523.1 (uncharacterized protein At4g28440 [Cucumis sativus] >KGN43465.1 hypothetical protein Csa_020344 [Cucumis sativus]) HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69 Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of Lag0014891 vs. NCBI nr
Match: XP_022988994.1 (uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_023529810.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo] >KAG7022832.1 hypothetical protein SDJN02_16568 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69 Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of Lag0014891 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.0e-47 Identity = 95/142 (66.90%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of Lag0014891 vs. ExPASy Swiss-Prot
Match: Q97W73 (Single-stranded DNA binding protein Ssb OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=ssb PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 8.1e-04 Identity = 32/109 (29.36%), Postives = 46/109 (42.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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