Lag0014802 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0014802
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Mitochondrial transcription termination factor family protein
Location	chr12: 4764944 .. 4765930 (+)
RNA-Seq Expression	Lag0014802
Synteny	Lag0014802

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTAGCGCCAGTGGAAATGGTACTAGTATGCTGTGGTTCTTCAGGGACAAAGGTTTTGATGACAGAAGCATCGATAAGATGTTTAAGAAGTGTAGGCGTTTAGAAGGTATGCAGAACGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAGAAGAGGAAGCTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTCTAGCTCTTGGTCTTCAAGAGAAACTTGTCCCCATGGTTGAGTGCCTTGGGACGCTCAGCACTAAGCCTCATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGTCCTCTTTTGGCTTTTTTTCAAGCATTGGGTGTCTCTGAAAAGCAGCTTGGGAAGATGATTCTACTCAACCCGAGGCTCATTAGCTACAGCATTGAATTGAAGCTCATTGAAACTGTTGATTTTCTTGCTGGGGTTGGTCTAACAAAGGAGGGGATGATTGGTAAAGTACTAGCAAAAAATCCATTTCTCATGGGTTATAGCGTTGATAAAAGGCTCCGCCCTACTTCGGAGTTTTTGAAATCGATCGGTCTGAAGGAGATGGATCTTCAAGCAGTTGCGTTGAAATTTCCAGACATTTTGTGCAGGGATGTGGATAAAGTTTTGAGACCAAATTTGGTTTATCTAAGAAGATGTGGGTTTAAAGATGGAGAGATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTCTAGAACCTCGGATCAGATTTTTAGTTGAAATAATGGGAAGAAAACTTGATGAAGTTGCCAAATATCCGGACTTTTTTAAGCATGGTTTGAAGAAAAGACTCGAGCTGAGGCATAGATTGTTGAAAGAGAAGAAAGTGGACTTTACCTTGAGTGAATTGCTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

mRNA sequence

ATGGAAATTAGCGCCAGTGGAAATGGTACTAGTATGCTGTGGTTCTTCAGGGACAAAGGTTTTGATGACAGAAGCATCGATAAGATGTTTAAGAAGTGTAGGCGTTTAGAAGGTATGCAGAACGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAGAAGAGGAAGCTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTCTAGCTCTTGGTCTTCAAGAGAAACTTGTCCCCATGGTTGAGTGCCTTGGGACGCTCAGCACTAAGCCTCATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGTCCTCTTTTGGCTTTTTTTCAAGCATTGGGTGTCTCTGAAAAGCAGCTTGGGAAGATGATTCTACTCAACCCGAGGCTCATTAGCTACAGCATTGAATTGAAGCTCATTGAAACTGTTGATTTTCTTGCTGGGGTTGGTCTAACAAAGGAGGGGATGATTGGTAAAGTACTAGCAAAAAATCCATTTCTCATGGGTTATAGCGTTGATAAAAGGCTCCGCCCTACTTCGGAGTTTTTGAAATCGATCGGTCTGAAGGAGATGGATCTTCAAGCAGTTGCGTTGAAATTTCCAGACATTTTGTGCAGGGATGTGGATAAAGTTTTGAGACCAAATTTGGTTTATCTAAGAAGATGTGGGTTTAAAGATGGAGAGATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTCTAGAACCTCGGATCAGATTTTTAGTTGAAATAATGGGAAGAAAACTTGATGAAGTTGCCAAATATCCGGACTTTTTTAAGCATGGTTTGAAGAAAAGACTCGAGCTGAGGCATAGATTGTTGAAAGAGAAGAAAGTGGACTTTACCTTGAGTGAATTGCTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

Coding sequence (CDS)

ATGGAAATTAGCGCCAGTGGAAATGGTACTAGTATGCTGTGGTTCTTCAGGGACAAAGGTTTTGATGACAGAAGCATCGATAAGATGTTTAAGAAGTGTAGGCGTTTAGAAGGTATGCAGAACGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAGAAGAGGAAGCTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTCTAGCTCTTGGTCTTCAAGAGAAACTTGTCCCCATGGTTGAGTGCCTTGGGACGCTCAGCACTAAGCCTCATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGTCCTCTTTTGGCTTTTTTTCAAGCATTGGGTGTCTCTGAAAAGCAGCTTGGGAAGATGATTCTACTCAACCCGAGGCTCATTAGCTACAGCATTGAATTGAAGCTCATTGAAACTGTTGATTTTCTTGCTGGGGTTGGTCTAACAAAGGAGGGGATGATTGGTAAAGTACTAGCAAAAAATCCATTTCTCATGGGTTATAGCGTTGATAAAAGGCTCCGCCCTACTTCGGAGTTTTTGAAATCGATCGGTCTGAAGGAGATGGATCTTCAAGCAGTTGCGTTGAAATTTCCAGACATTTTGTGCAGGGATGTGGATAAAGTTTTGAGACCAAATTTGGTTTATCTAAGAAGATGTGGGTTTAAAGATGGAGAGATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTCTAGAACCTCGGATCAGATTTTTAGTTGAAATAATGGGAAGAAAACTTGATGAAGTTGCCAAATATCCGGACTTTTTTAAGCATGGTTTGAAGAAAAGACTCGAGCTGAGGCATAGATTGTTGAAAGAGAAGAAAGTGGACTTTACCTTGAGTGAATTGCTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

Protein sequence

MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLLAFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMGLL

Homology

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BLAST of Lag0014802 vs. NCBI nr
Match: XP_022135779.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 607.8 bits (1566), Expect = 5.4e-170
Identity = 306/328 (93.29%), Postives = 316/328 (96.34%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NGT+MLWFFRDKGFDDRSIDKMFKKCRRLE +  ERASENWEYLERIGIQKRK
Sbjct: 6   METSASRNGTNMLWFFRDKGFDDRSIDKMFKKCRRLEAVHKERASENWEYLERIGIQKRK 65

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LP VVSKCPKILALGL EKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL
Sbjct: 66  LPFVVSKCPKILALGLHEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 125

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EKQLGKMILLNPRLISYSIE KLIETVDFLAG+GLTKEGM+GKV+AKNPFL
Sbjct: 126 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGLGLTKEGMLGKVIAKNPFL 185

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYS+DKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG
Sbjct: 186 MGYSIDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 245

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           E+VSLVTGYPPILIKSI+HSLEPRIRFLVEIMGRKL+EVAKYPDFFKHG KKRLELR +L
Sbjct: 246 EVVSLVTGYPPILIKSIKHSLEPRIRFLVEIMGRKLEEVAKYPDFFKHGFKKRLELRQKL 305

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           L EKKVDFTLSELLECNQKKFMMKMGLL
Sbjct: 306 LIEKKVDFTLSELLECNQKKFMMKMGLL 333

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BLAST of Lag0014802 vs. NCBI nr
Match: XP_038887558.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 600.1 bits (1546), Expect = 1.1e-167
Identity = 301/328 (91.77%), Postives = 314/328 (95.73%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME+SAS NG  MLWFFRDKGFDDRSIDKMFK+CRRL+ MQ ERASENWEYLERIGIQ+RK
Sbjct: 1   MEVSASRNGNCMLWFFRDKGFDDRSIDKMFKRCRRLKDMQKERASENWEYLERIGIQRRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPS+VSKCPKILALGLQEKLVPMVECL TLSTKP+EIASAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSIVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EK LGKMILLNPRLISYSIE KL+ETVDF AG GL KEG+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFFAGFGLMKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPTSEFL+SIGL EMDLQAVALKFPDILCRDVDKVLRPNL YLRRCGFKDG
Sbjct: 181 MGYSVDKRLRPTSEFLRSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRCGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVA+YPDFFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKRLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK++DFTLSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKQMDFTLSELLECNQKKFMMKMGLL 328

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BLAST of Lag0014802 vs. NCBI nr
Match: XP_004144567.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KGN43380.1 hypothetical protein Csa_020537 [Cucumis sativus])

HSP 1 Score: 595.5 bits (1534), Expect = 2.8e-166
Identity = 303/328 (92.38%), Postives = 312/328 (95.12%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NG  MLWFFRDKGFDDRSIDKMF+KCRRLE MQNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECL TLSTKPHEIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EKQLGKMILLNPRLISYSIE KL+ETVDFLAGVGLTKEG+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPT EFLKSIGL +MDLQAVALKFPDILCRDVDKVLR NL YLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVA+YPDFFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

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BLAST of Lag0014802 vs. NCBI nr
Match: XP_008451174.1 (PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 594.7 bits (1532), Expect = 4.7e-166
Identity = 302/328 (92.07%), Postives = 311/328 (94.82%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NG  MLWFFRDKGFDDRSIDKMF+KCRRLE  QNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECL TLSTKPHEIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EK LGKMILLNPRLISYSIE KL+ETVDFLAGVGLTKEG+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPT EFLKSIGL +MDLQAVALKFPDILCRDVDKVLR NL YLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVA+YPDFFKHGLKK+LELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of Lag0014802 vs. NCBI nr
Match: KAA0059582.1 (transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 transcription termination factor MTERF6 [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.7e-166
Identity = 302/328 (92.07%), Postives = 311/328 (94.82%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NG  MLWFFRDKGFDDRSIDKMF+KCRRLE  QNERASENWEYLERIGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECL TLSTKPHEIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EK LGKMILLNPRLISYSIE KL+ETVDFLAGVGLTKEG+IGKVLAKNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPT EFLKSIGL +MDLQAVALKFPDILCRDVDKVLR NL YLR  GFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVA+YPDFFKHGLKK+LELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 308 LKEKNVDFTLSELLECNQKKFMMKMGLL 335

[Close]

BLAST of Lag0014802 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.4e-120
Identity = 211/321 (65.73%), Postives = 263/321 (81.93%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL +L   P E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFLMGYSVD 187
           GV E QLGKMIL NPRLISYSI+ KL   V FLA +GL ++GMIGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTSEFLK-SIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDGEIVSL 247
           KRLRPT+EFLK S+GL E  +++V + FP +LCRDV+K+L+PN  YL+ CGF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YP+FF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of Lag0014802 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.3e-27
Identity = 81/283 (28.62%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 50  YLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILS 109
           YL  +G+   ++ ++  K        L  K+ P+VE L  L     +I + + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 110 YSVEEKLCPLLAFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGM 169
            S+ + L P +AF + LG+ + Q  K+I   P +++YS + KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEFLSQTGLTEE-Q 321

Query: 170 IGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNL 229
           IG++L + P +M YSV+ +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 230 VYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHG 289
            +    GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ K+P FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 290 LKKRLELRHRLLKEKKVDFTLSELLECN-------QKKFMMKM 326
           L++R++ R+ L++   V   L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

[Close]

BLAST of Lag0014802 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.5e-26
Identity = 73/291 (25.09%), Postives = 146/291 (50.17%), Query Frame = 0


Query: 32  KCRRLEGMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLS 91
           +C  L     E      ++  ++G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPHEIASAIAKFPGILSYSVEEKLCPLLAFFQALGVSEKQLGKMILLNPRLISYSIELK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+ ++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LIETVDFLAGVGLTKEGMIGKVLAKNPFLMGYSVDKRLRPTSEFLKS-IGLKEMDLQAVA 211
           +   V FL  +G+  E  IG +L K P L+  S+ K++RP   FL +  G+ + D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRPNLVYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 271
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKF 322
            M R L ++ ++P FF + L++R+  RH ++ E +V+F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of Lag0014802 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.5e-26
Identity = 69/313 (22.04%), Postives = 154/313 (49.20%), Query Frame = 0


Query: 49  EYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGIL 108
           +YL ++G+++  LP ++ + P++L   +   L P+V+ L  +  +PH++   + ++P +L
Sbjct: 149 DYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELL 208

Query: 109 SYSVEEKLCPLLAFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEG 168
            + +E  +   +A+   +GV+ +Q+G +I   P ++   +   +   V+ L G+GL +  
Sbjct: 209 GFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLA 268

Query: 169 MIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDIL----------- 228
            I +++ K P+++G+ ++ +++P  E L   G+++  L  +  ++PDIL           
Sbjct: 269 -IARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQ 328

Query: 229 -----------CRDVDKVLR--------------PNLVYLRRCGFKDGEIVSLVTGYPPI 288
                        D  +V+                ++ +L  CGF   ++  +V   P +
Sbjct: 329 QSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCGFLLSQVSKMVVACPQL 388

Query: 289 LIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKKVDFTLSE 326
           L  ++   ++    +    M R L+E+ ++P FF +GL+  +  RH ++ +K    +L+ 
Sbjct: 389 LALNMD-IMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAW 448

[Close]

BLAST of Lag0014802 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.7e-21
Identity = 64/230 (27.83%), Postives = 119/230 (51.74%), Query Frame = 0


Query: 44  ASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAK 103
           A E  +YL  +G++ R +  ++ + P+IL   ++  L   +  L  L     +I   +A 
Sbjct: 219 AQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAA 278

Query: 104 FPGILSYSVEEKLCPLLAF-FQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLA-G 163
            P + SYSVE  L P + +  + +G+ E  +GK++ L+P+++   +++       FL+  
Sbjct: 279 TPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKE 338

Query: 164 VGLTKEGMIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDV 223
           +G  ++ ++ K++ K+P L+ YS+D    P   FL+SIG+   D+  V      +L   +
Sbjct: 339 LGAPRDSVV-KMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSL 398

Query: 224 DKVLRPNLVYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEI 272
           +  L+P  +YL     +    V ++T YP  L  S+   + PR RFLVE+
Sbjct: 399 EDNLKPKYMYLVN---ELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVEL 444

[Close]

BLAST of Lag0014802 vs. ExPASy TrEMBL
Match: A0A6J1C2G0 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007658 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.6e-170
Identity = 306/328 (93.29%), Postives = 316/328 (96.34%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NGT+MLWFFRDKGFDDRSIDKMFKKCRRLE +  ERASENWEYLERIGIQKRK
Sbjct: 6   METSASRNGTNMLWFFRDKGFDDRSIDKMFKKCRRLEAVHKERASENWEYLERIGIQKRK 65

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LP VVSKCPKILALGL EKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL
Sbjct: 66  LPFVVSKCPKILALGLHEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 125

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EKQLGKMILLNPRLISYSIE KLIETVDFLAG+GLTKEGM+GKV+AKNPFL
Sbjct: 126 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGLGLTKEGMLGKVIAKNPFL 185

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYS+DKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG
Sbjct: 186 MGYSIDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 245

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           E+VSLVTGYPPILIKSI+HSLEPRIRFLVEIMGRKL+EVAKYPDFFKHG KKRLELR +L
Sbjct: 246 EVVSLVTGYPPILIKSIKHSLEPRIRFLVEIMGRKLEEVAKYPDFFKHGFKKRLELRQKL 305

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           L EKKVDFTLSELLECNQKKFMMKMGLL
Sbjct: 306 LIEKKVDFTLSELLECNQKKFMMKMGLL 333

[Close]

BLAST of Lag0014802 vs. ExPASy TrEMBL
Match: A0A0A0K108 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.3e-166
Identity = 303/328 (92.38%), Postives = 312/328 (95.12%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NG  MLWFFRDKGFDDRSIDKMF+KCRRLE MQNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECL TLSTKPHEIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EKQLGKMILLNPRLISYSIE KL+ETVDFLAGVGLTKEG+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPT EFLKSIGL +MDLQAVALKFPDILCRDVDKVLR NL YLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVA+YPDFFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of Lag0014802 vs. ExPASy TrEMBL
Match: A0A5A7UUK2 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00330 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.3e-166
Identity = 302/328 (92.07%), Postives = 311/328 (94.82%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NG  MLWFFRDKGFDDRSIDKMF+KCRRLE  QNERASENWEYLERIGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECL TLSTKPHEIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EK LGKMILLNPRLISYSIE KL+ETVDFLAGVGLTKEG+IGKVLAKNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPT EFLKSIGL +MDLQAVALKFPDILCRDVDKVLR NL YLR  GFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVA+YPDFFKHGLKK+LELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 308 LKEKNVDFTLSELLECNQKKFMMKMGLL 335

[Close]

BLAST of Lag0014802 vs. ExPASy TrEMBL
Match: A0A1S3BQA2 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492550 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.3e-166
Identity = 302/328 (92.07%), Postives = 311/328 (94.82%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           ME SAS NG  MLWFFRDKGFDDRSIDKMF+KCRRLE  QNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECL TLSTKPHEIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EK LGKMILLNPRLISYSIE KL+ETVDFLAGVGLTKEG+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           MGYSVDKRLRPT EFLKSIGL +MDLQAVALKFPDILCRDVDKVLR NL YLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKLDEVA+YPDFFKHGLKK+LELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of Lag0014802 vs. ExPASy TrEMBL
Match: A0A6J1I081 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468249 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.3e-165
Identity = 301/328 (91.77%), Postives = 309/328 (94.21%), Query Frame = 0


Query: 1   MEISASGNGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERIGIQKRK 60
           MEIS S NGTSMLWFFRDKGFDD SIDKMFKKCRRLEGMQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECL TL+TKP EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFL 180
           AFFQALGV EKQLGKMILLNPRLISYSIE KLIETVDFLAGVGLTKEGMIGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 MGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDG 240
           +GYSV KRLRPT EFLKSIGL EMDLQAVALKFPDILCRDVDKVLRPNL YLRR GFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGR LDEVA+YP+FFKHGLKKRLELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK +DFTLSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

[Close]

BLAST of Lag0014802 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121
Identity = 211/321 (65.73%), Postives = 263/321 (81.93%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL +L   P E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFLMGYSVD 187
           GV E QLGKMIL NPRLISYSI+ KL   V FLA +GL ++GMIGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTSEFLK-SIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDGEIVSL 247
           KRLRPT+EFLK S+GL E  +++V + FP +LCRDV+K+L+PN  YL+ CGF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YP+FF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of Lag0014802 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121
Identity = 211/321 (65.73%), Postives = 263/321 (81.93%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL +L   P E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFLMGYSVD 187
           GV E QLGKMIL NPRLISYSI+ KL   V FLA +GL ++GMIGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTSEFLK-SIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDGEIVSL 247
           KRLRPT+EFLK S+GL E  +++V + FP +LCRDV+K+L+PN  YL+ CGF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YP+FF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of Lag0014802 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121
Identity = 211/321 (65.73%), Postives = 263/321 (81.93%), Query Frame = 0


Query: 8   NGTSMLWFFRDKGFDDRSIDKMFKKCRRLEGMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL +L   P E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMIGKVLAKNPFLMGYSVD 187
           GV E QLGKMIL NPRLISYSI+ KL   V FLA +GL ++GMIGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTSEFLK-SIGLKEMDLQAVALKFPDILCRDVDKVLRPNLVYLRRCGFKDGEIVSL 247
           KRLRPT+EFLK S+GL E  +++V + FP +LCRDV+K+L+PN  YL+ CGF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGLKKRLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YP+FF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of Lag0014802 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.9 bits (333), Expect = 4.7e-31
Identity = 82/271 (30.26%), Postives = 145/271 (53.51%), Query Frame = 0


Query: 51  LERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILSY 110
           +E++ +  +    ++ K P IL+  +QE    +     + S    +I  AI ++P +L  
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366

Query: 111 SVEEKLCPLLAFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGMI 170
           S    +  ++  F  LGV +K++GK+I   P+L+    + + ++ V FL  +G  KE ++
Sbjct: 367 SA-SNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQ-EFLKVVCFLEDLGFQKE-IV 426

Query: 171 GKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNLV 230
           G++L + P + G S++K L+    FL   G+       +  K+P+ L  D DK + P L 
Sbjct: 427 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 486

Query: 231 YLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHGL 290
           YL   G  + EI  ++  + PIL  SI   L P+  FLV  M + + EV +YP +F + L
Sbjct: 487 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 546

Query: 291 KKRLELRHRLLKEKKVDFTLSELLECNQKKF 322
           +KR++ R R+LK + ++ TL E+L  N ++F
Sbjct: 547 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]

BLAST of Lag0014802 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.8e-28
Identity = 81/283 (28.62%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 50  YLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLGTLSTKPHEIASAIAKFPGILS 109
           YL  +G+   ++ ++  K        L  K+ P+VE L  L     +I + + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 110 YSVEEKLCPLLAFFQALGVSEKQLGKMILLNPRLISYSIELKLIETVDFLAGVGLTKEGM 169
            S+ + L P +AF + LG+ + Q  K+I   P +++YS + KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEFLSQTGLTEE-Q 321

Query: 170 IGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRDVDKVLRPNL 229
           IG++L + P +M YSV+ +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 230 VYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLDEVAKYPDFFKHG 289
            +    GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ K+P FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 290 LKKRLELRHRLLKEKKVDFTLSELLECN-------QKKFMMKM 326
           L++R++ R+ L++   V   L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

The following BLAST results are available for this feature:

BLAST of Lag0014802 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135779.1	5.4e-170	93.29	transcription termination factor MTERF6, chloroplastic/mitochondrial [Momordica ...	[more]
XP_038887558.1	1.1e-167	91.77	transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa ...	[more]
XP_004144567.1	2.8e-166	92.38	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]
XP_008451174.1	4.7e-166	92.07	PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial ...	[more]
KAA0059582.1	4.7e-166	92.07	transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 t...	[more]

BLAST of Lag0014802 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	2.4e-120	65.73	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4JVI3	5.3e-27	28.62	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	4.5e-26	25.09	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	4.5e-26	22.04	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
Q9FM80	5.7e-21	27.83	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Lag0014802 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2G0	2.6e-170	93.29	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Momordic...	[more]
A0A0A0K108	1.3e-166	92.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1	[more]
A0A5A7UUK2	2.3e-166	92.07	Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BQA2	2.3e-166	92.07	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis ...	[more]
A0A6J1I081	4.3e-165	91.77	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]

BLAST of Lag0014802 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38160.1	1.7e-121	65.73	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	1.7e-121	65.73	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	1.7e-121	65.73	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	4.7e-31	30.26	Mitochondrial transcription termination factor family protein	[more]
AT4G14605.1	3.8e-28	28.62	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 276..307 e-value: 3.2 score: 16.7 coord: 171..202 e-value: 1.7E-5 score: 34.3 coord: 27..57 e-value: 250.0 score: 8.5 coord: 134..165 e-value: 0.0015 score: 27.8 coord: 207..238 e-value: 0.11 score: 21.7 coord: 62..93 e-value: 86.0 score: 12.0 coord: 243..275 e-value: 0.21 score: 20.6 coord: 98..129 e-value: 2.4E-4 score: 30.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 7..167 e-value: 9.9E-24 score: 83.8 coord: 169..321 e-value: 5.4E-32 score: 111.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 11..327
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 93..326 e-value: 4.1E-55 score: 188.8
None	No IPR available	PANTHER	PTHR13068:SF5	TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 11..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0014802.1	Lag0014802.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding