Lag0014800 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAGCTTGGCGTTAGGTCGAGGTCCAATGTGCATGGCCACCATTGTCTTCTTCACTTGTGTATGGATCCCTCTGTGTCAACTGAAAACAACCATCGAGAGCGTGATCGGTATACTGTTAGGCAGGACGTCTCAGCCACTCACGACGGAGTCGCCACCGTTCGAGGTAAAACTTCCGGTTTGTAGGTTCGAAGAGCTGCAGCGAGGGGGTGGATTGGAGGATATTTGCTCCGTTTGCTTGGCGGAGTTCACCAGGGAAGATTTGGTTAGCCAACTGCATAGATGTAGCCATGTTTTCCATTTGGAGTGTATTGAGAATTGGCTCCATAGAAGTCACTTTACCTGCCCTCTCTGCCGATCCTTCCTCTTCTCAACATTGTAA ATGATAAGCTTGGCGTTAGGTCGAGGTCCAATGTGCATGGCCACCATTGTCTTCTTCACTTGTGTATGGATCCCTCTGTGTCAACTGAAAACAACCATCGAGAGCGTGATCGGTATACTGTTAGGCAGGACGTCTCAGCCACTCACGACGGAGTCGCCACCGTTCGAGGTAAAACTTCCGGTTTGTAGGTTCGAAGAGCTGCAGCGAGGGGGTGGATTGGAGGATATTTGCTCCGTTTGCTTGGCGGAGTTCACCAGGGAAGATTTGGTTAGCCAACTGCATAGATGTAGCCATGTTTTCCATTTGGAGTGTATTGAGAATTGGCTCCATAGAAGTCACTTTACCTGCCCTCTCTGCCGATCCTTCCTCTTCTCAACATTGTAA ATGATAAGCTTGGCGTTAGGTCGAGGTCCAATGTGCATGGCCACCATTGTCTTCTTCACTTGTGTATGGATCCCTCTGTGTCAACTGAAAACAACCATCGAGAGCGTGATCGGTATACTGTTAGGCAGGACGTCTCAGCCACTCACGACGGAGTCGCCACCGTTCGAGGTAAAACTTCCGGTTTGTAGGTTCGAAGAGCTGCAGCGAGGGGGTGGATTGGAGGATATTTGCTCCGTTTGCTTGGCGGAGTTCACCAGGGAAGATTTGGTTAGCCAACTGCATAGATGTAGCCATGTTTTCCATTTGGAGTGTATTGAGAATTGGCTCCATAGAAGTCACTTTACCTGCCCTCTCTGCCGATCCTTCCTCTTCTCAACATTGTAA MISLALGRGPMCMATIVFFTCVWIPLCQLKTTIESVIGILLGRTSQPLTTESPPFEVKLPVCRFEELQRGGGLEDICSVCLAEFTREDLVSQLHRCSHVFHLECIENWLHRSHFTCPLCRSFLFSTL Homology
BLAST of Lag0014800 vs. NCBI nr
Match: KAG6589096.1 (AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 8.0e-29 Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Lag0014800 vs. NCBI nr
Match: KAG7022803.1 (AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.2 bits (339), Expect = 4.0e-28 Identity = 69/91 (75.82%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of Lag0014800 vs. NCBI nr
Match: CAB4291060.1 (unnamed protein product [Prunus armeniaca] >CAB4321379.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26 Identity = 62/132 (46.97%), Postives = 85/132 (64.39%), Query Frame = 0
BLAST of Lag0014800 vs. NCBI nr
Match: MBA0556883.1 (hypothetical protein [Gossypium lobatum]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-26 Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 0
BLAST of Lag0014800 vs. NCBI nr
Match: VVA26628.1 (PREDICTED: AP-1 complex subunit [Prunus dulcis]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-26 Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of Lag0014800 vs. ExPASy Swiss-Prot
Match: Q9SZL4 (RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17 Identity = 52/135 (38.52%), Postives = 69/135 (51.11%), Query Frame = 0
BLAST of Lag0014800 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of Lag0014800 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.9e-10 Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Lag0014800 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.1e-10 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Lag0014800 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.6e-10 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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