Lag0014785 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTCTCCAGTCTCCCAGCTCCATCTGAAGGAGTCATTAACGCGCTTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTGATTCTTCACATTGTAGGAATTCGTCTCTCATCGCCATCATCCTTGGTCCCATCATCAGATTCCTTGGAAAATTCCTCAGAGTTAGGAGATTCCAATTTTGGTTCCTCTTGGAGTTATATTGAGATGTTTCGGAACCGATATTCTACGATCAGGTTTGATGAAGTACAGGGATCCGAACATCGTGAACATGACTGCTCAGTCTGCTTAACTCAGTTTGAACCTGAGTCGGAGATAAATCACTTATCTTGTGGCCATCTTTTTCACTCAGAATGCTTGGAGAAGTGGCTGGATTACTGGAACGTTACATGTCCTCTTTGCAGAACTCCTCTAATGTCCGAAGAAGAGAAGTCGTGCTTTTGGTGA ATGGGCCTCTCCAGTCTCCCAGCTCCATCTGAAGGAGTCATTAACGCGCTTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTGATTCTTCACATTGTAGGAATTCGTCTCTCATCGCCATCATCCTTGGTCCCATCATCAGATTCCTTGGAAAATTCCTCAGAGTTAGGAGATTCCAATTTTGGTTCCTCTTGGAGTTATATTGAGATGTTTCGGAACCGATATTCTACGATCAGGTTTGATGAAGTACAGGGATCCGAACATCGTGAACATGACTGCTCAGTCTGCTTAACTCAGTTTGAACCTGAGTCGGAGATAAATCACTTATCTTGTGGCCATCTTTTTCACTCAGAATGCTTGGAGAAGTGGCTGGATTACTGGAACGTTACATGTCCTCTTTGCAGAACTCCTCTAATGTCCGAAGAAGAGAAGTCGTGCTTTTGGTGA ATGGGCCTCTCCAGTCTCCCAGCTCCATCTGAAGGAGTCATTAACGCGCTTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTGATTCTTCACATTGTAGGAATTCGTCTCTCATCGCCATCATCCTTGGTCCCATCATCAGATTCCTTGGAAAATTCCTCAGAGTTAGGAGATTCCAATTTTGGTTCCTCTTGGAGTTATATTGAGATGTTTCGGAACCGATATTCTACGATCAGGTTTGATGAAGTACAGGGATCCGAACATCGTGAACATGACTGCTCAGTCTGCTTAACTCAGTTTGAACCTGAGTCGGAGATAAATCACTTATCTTGTGGCCATCTTTTTCACTCAGAATGCTTGGAGAAGTGGCTGGATTACTGGAACGTTACATGTCCTCTTTGCAGAACTCCTCTAATGTCCGAAGAAGAGAAGTCGTGCTTTTGGTGA MGLSSLPAPSEGVINALLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLENSSELGDSNFGSSWSYIEMFRNRYSTIRFDEVQGSEHREHDCSVCLTQFEPESEINHLSCGHLFHSECLEKWLDYWNVTCPLCRTPLMSEEEKSCFW Homology
BLAST of Lag0014785 vs. NCBI nr
Match: KAG6572211.1 (putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011849.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 294.7 bits (753), Expect = 4.7e-76 Identity = 138/154 (89.61%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lag0014785 vs. NCBI nr
Match: XP_022969282.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima] >XP_022969284.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]) HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76 Identity = 138/154 (89.61%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of Lag0014785 vs. NCBI nr
Match: XP_023554631.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75 Identity = 137/154 (88.96%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lag0014785 vs. NCBI nr
Match: XP_022952716.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata] >XP_022952717.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata] >XP_022952718.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]) HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75 Identity = 136/154 (88.31%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lag0014785 vs. NCBI nr
Match: XP_038887530.1 (probable E3 ubiquitin-protein ligase XERICO isoform X1 [Benincasa hispida]) HSP 1 Score: 287.0 bits (733), Expect = 9.9e-74 Identity = 135/154 (87.66%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of Lag0014785 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 7.0e-38 Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 0
BLAST of Lag0014785 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12 Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of Lag0014785 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of Lag0014785 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10 Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of Lag0014785 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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