Lag0014771 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0014771
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like
Location	chr12: 4492523 .. 4497415 (+)
RNA-Seq Expression	Lag0014771
Synteny	Lag0014771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTCTTATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTCCTTCTTCAAGGTACGGTCTCCTCTCCCTTCTCGTTTCACCTTCTCTTGCGAAAACCAGACAGAGACTCTAATCAAAGCCCTAAGCACCTCCGCAATCCCTAATGATTTCTCAAATTTTCCTCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATATCATCAGGGCCAGTGGGGCTCGCCGAGCCAGGTTCATCCTTCGAGTGGAAATTTTAATAACCAGTCGTTCTCGGAGTTTCAGAATCGCGACTATGTTCAACAGGGAAGCCCTAATAATCAAATGAATTATCGGGGTCAGAACCACAACTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGAGCTATACTCAAACCGGTAACCCAAATTCGTGGAATCCTCCGAATCGGAGCTACCCGCAGTATCAAAATCCTCCGCAGCAGAACAGTCAAAATTTCAATTATCCGCAACAAAGAGGGCCAAACCAATGGAACAATCAAAATCAGGGATACCCTCAATTTGGAATGCCTGGACAGCGGAACCCACAAGTTGAGAATTCTAATCAGTTGAATAATCAGGCTGAAGACGAAAGGATTTGGGGAAGAAATGAGTTTTAGGTTGAAGAAGATGAAAGGGTGGGTGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAGCAGAACGACGGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCTCCGGAGAGGCCGGAGATGAGACGGGTGTTGGCGAAGTGGGAAAGGCAGAGGTCGGCGAGCAGGGAGTCGACGGTGGTCGGGATTTGGGATTTTTGGGGAGGAGGAGGCGGGCGGCGAAGGCGAAGGTAAATTTAAAAAAAAAAAAAAATCTTCCATCATTGATGTCGGAGTTGAAACGCCAGCGATGGAAGTTTGTTCACCAACGAAAGTTTGAAATATTGGAGATAAAAAGTGTTTGCCGGCGACGGAAAGAAAAATGAAGAAGAAAGAAGGGAAAGAGAAGGGGGCACGGGTGAAGGAGGATGGGGAAGAGAGAGAAATTGTTTTTTATTTTTATTATTTTTATTTAAAAAGAAATATTATTATTTATTATTATTATTATATTATTTAAAATTTAAAAAATCAATATTTTATTATTTTAACGTGCCACGTCAGCACCGTTAAAAAAATTAACGGTCCAGGGACTCAATAGAAGCATTTTCAAAACAGTGGGGACTTGATTGTTCAATTTTGAAACCTAGGGACCTATTAGAAACTAACCCGAAACATGAGGGACCAAAAAGGTATTTTACCCTTTTTTGTTTATTTTTATTTTTGCTTATTCTATTTTTATTTGTGTCTATATCTTATTTTAATCTTACAATTTCATACTTATTTTTTCATTTTTTTTAATTTTCATTTCCATTTTACTAGTTCAACTTCTCATAATGGATTGCTTTTTTTTTTTCCTTGAGTTTTTGAGTTTTTGTTTTTTTTTCATAGAAAATTATGTGGTATCACCAAATTTGTTTCTTAAGTCACTTTATTTCATTATGAAATGTCAATAGTAATGATTAAAAGTGGAGTTTGTTATAATAAAGTTCAAACATATATGTTGTGAAAAAAAAAGTTCAAATACTGGAATATATATATATATAAATATAAAGTATTACAGATCAAAATTAAATATTTAAAAGAAAGAATGTATAACTAAAATTAAATAAGTGTGATATAAATGCTTTGGAAAAATATGAAATTTTCCATTACTAGTGAGCTTAAACCAATGGTTGAGTCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGTTGTTGATGATGAAATATACGAAAAAGGGCCTCAAGGTATCCCGAAACCCTTCCTCCCTCACAGGACGAGCGAAACCTGTAGTTTCCACCCGAATGTTTGCTACCCTGAAATTTGTTTATCTTTCCTGAATGATAAGGAGAAAAATCAAATTGGATCAAAAGAAAATGTCATTTTTGAGTTTTATCAACAATTTTCTTGTGTAGGCGGAGATCCGATATTTTCTGAATCCTTATGTAAAGAATTACAAAAGAAATTCTTTCAACAAAGATGTGAATTAGGAAGGATTGGTCGACGAAATCTGAACCAGAGACTTAATCTTGATATACTTGAGAACAATACATTTTTGCTACCGCGAGATATATTGGCAGCTACAAATGGCATCATCGACTTGCTTATCGACCTAAGTGATTTCTTAACTCGAAAGAAAGACCTCTCTTGGCAATGAGTGACTTTCTGACCTAGAAGAAACTCATGCCAAAATGGGGACGATAAGACAAACTTGTCAAGTTTGATTGATATGTTGCGTCAGTCCGCCGCTTTGACGAACCAACCATGTCGTGGATGCCTTAAGCTTAAGTAGGAAGACAAAGCTGACGGCATTTAAGTGTGAGGCAGTGGCAGCCACCAGCAGGGTCACGAGTACCATACCGCATCGTGCTTTTACCTTTTATTGGGTCATTAATGCATCAATAGAGTCAATTGTTTCTAATTTTTTTTTTAAAAAAAAAAAAAAATCAATGGTTGAGTTTTTATAATTTTCTAAGAAAGTAAAGAGAAAATACTAGGTTGGTCTATTAGTTTTGAGTTTAGTTTCCATTTAGTTCATAGGTCTCAAAATGTTACACTTTTACTTGTGAATTTGAATTTATAAGTTTTCATTTGATCTCTTGGTTTCAAAATGTTACATTTTATCCTTAGATTTTTACTAATCTTCACTTTTGGTCCTTGATGTTAACAATTCATTAATTAATTTAAAAGAATTACGATATGTTTTTTTTTAATTAATTCTAATAGCGACATGGAAAAACAATTACTTTTAAATTATTATTTTAGGCGAAGTAGATTTTTTTTAAAATAAAAAAATTACGAGAAAAAAAAAAAAAAAACTTCTCCCTCTCTCTAAGCTTCTTCCACCCCTCCCTGCCACCATCGCTCGTTCCCATTGTTCATCATTCGTCATTGTCGCCTCCCGCCCTACTATCTTCACTCACCCTCACTAAAAAGAGAGTTGAATTTGAAAAGAAAAAAAAAAAAACTAAACTCAAATCTCACAGACAAAATTATTACATTTTAAAACCTCAAAACTAATCAGAAACTATACTCAAAACTCAAGAACCAAAATCGGTTTTTCTTTTCTACATCAACATCTGGAGTGAGGGGATTCGAACCTCTTGGTCGAGGATTTATGTCAATTACCGCTGAGCTATGCTTGCTTTGGCTACAAAAATAAAATCTATGACCAACTGGACTAGACTATTTTTATGAGTATTGATTCTCTTAGTTATATGGTATACTTTTTAGTTGCTTAAACACTTTAGTATTGAGCTATTTTATACATACTTCTTTATGCTTATAAGTTTAAAGATATTTGCGGTTTGAGTCTTTATGTAGTTCCATAACGAGTTGTTAAAATAATTTTGTTTGATTTGTTGGCTAATTCATAATATATATATATATATATATATATTCTAATTCGATTTTGAAAAGACATTAAATTTCACACTTTGTTCGATCAAAATTGAAAGCTTAAGATTAAAATTAGTTCACTGCGTCGAAAATAAGGGTAAAACAAGAAAATTTTCTAACAAAATATCAATAGAGTATTTGGGTTTTATTTCATATGATGTGAGAATAGTTTAGAAATCACTTCTCTAAGCACTTTTTTGAAAATCTTAAAGCCATCACACAAAGGACAAAACTTTTTCAAGTGCCCAACTTTGTTCGTTTCCCCAATTTCAATATAATGGATTTCCCTTTTTGCTTTGCCATCTCTCTGTCACTTGATGAGCCAACAATGTTTAAAGTCAGTTTAGATTCATTTAGAATGAGTTTTAGAAAAATGTTTTAAGCATTTTCTCGAGAAGACAAATTAAGATGTTTCTTTAAAAGCACTTTCATTTGTTGAAGTTTTAAAACCATATTTGTTCGTCTAATCTACTAGTAAAAACTTCGATGGTAAAATACGTTTTTGGCCCCTAAATTTCGAACTTAGTTTCTACGTAGTTTCTGGATTTCTAGAACTAGGTACACTTTTAGTCTTTGAGATTTGAATTTAGTTTCTATTTGATCCTCGAAATTTTAAGGTGACAAGTAGAGTCCTCGAAGTTTGAATTTGATTTTCAATTAGTCTCTAAACTTTGAAGTTGGTTTTTGAACTATCCCTGAATGAACTTGATGTTAATTGACTTGACGAAATACATGATAGTTAACATATGTTGATTAGACTTTGCTGACATATATTTTCTTAAAGGAGTTCAAATTTTTTATACTTAGAAATCAATTTCAAACTTCGCTTACCAATTACAAATCAAATTTAAACTTCAAGAAACAAACATGTCACTTTTGAAACTTCAAAGAATAAATAGAAACCAAAATCAAATTTCAGTGACCAAAAGTGTCAGTAACCAAGGAACCAGATAGAAACTAAGTTCAAATCTCATGGACTAAAACTACGTTTTACCCAAAATTTGAAAAGTGCTTTTAACTATTTAGAGCACTTTTCATCCTTTCAAAAGCCATCTTAGAAAAGAAAAGGAAAAAATAAAAAAACCTGCATAAGGGACAAAATCATAAAATTAGCCATTTTAAAGTAACAAGAAAAGTGAAGAGTTGGTGCAGCAGAAGGACCAAAAGTTTGCCAAGTTCATCCATCCCCCCTAGAAGAAAGACAGAATCAGCTCTGACTCAGAGCCATTACTACACAGCAGAGACTGCAGTTGATACTGCTATCTCCATTCCTCTTACTGCCTCAGATAGTGATGTTTCAGACCATAAACCTGAAAGAGATGGCATCACTCTGGCTTAA

mRNA sequence

ATGGCGTCTCTTATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTCCTTCTTCAAGGTACGGTCTCCTCTCCCTTCTCGTTTCACCTTCTCTTGCGAAAACCAGACAGAGACTCTAATCAAAGCCCTAAGCACCTCCGCAATCCCTAATGATTTCTCAAATTTTCCTCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATATCATCAGGGCCAGTGGGGCTCGCCGAGCCAGGTTCATCCTTCGAGTGGAAATTTTAATAACCAGTCGTTCTCGGAGTTTCAGAATCGCGACTATGTTCAACAGGGAAGCCCTAATAATCAAATGAATTATCGGGGTCAGAACCACAACTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGAGCTATACTCAAACCGGTAACCCAAATTCGTGGAATCCTCCGAATCGGAGCTACCCGCAGTATCAAAATCCTCCGCAGCAGAACAGTCAAAATTTCAATTATCCGCAACAAAGAGGGCCAAACCAATGGAACAATCAAAATCAGGGATACCCTCAATTTGGAATGCCTGGACAGCGGAACCCACAAGTTGAAGAAGATGAAAGGGTGGGTGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAGCAGAACGACGGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCTCCGGAGAGGCCGGAGATGAGACGGGTGTTGGCGAAGTGGGAAAGGCAGAGGTCGGCGAGCAGGGAGTCGACGGTGGTCGGGATTTGGGATTTTTGGGGAGGAGGAGGCGGGCGGCGAAGGCGAAGCAGAAGGACCAAAAGTTTGCCAAGTTCATCCATCCCCCCTAGAAGAAAGACAGAATCAGCTCTGACTCAGAGCCATTACTACACAGCAGAGACTGCAGTTGATACTGCTATCTCCATTCCTCTTACTGCCTCAGATAGTGATGTTTCAGACCATAAACCTGAAAGAGATGGCATCACTCTGGCTTAA

Coding sequence (CDS)

ATGGCGTCTCTTATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTCCTTCTTCAAGGTACGGTCTCCTCTCCCTTCTCGTTTCACCTTCTCTTGCGAAAACCAGACAGAGACTCTAATCAAAGCCCTAAGCACCTCCGCAATCCCTAATGATTTCTCAAATTTTCCTCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATATCATCAGGGCCAGTGGGGCTCGCCGAGCCAGGTTCATCCTTCGAGTGGAAATTTTAATAACCAGTCGTTCTCGGAGTTTCAGAATCGCGACTATGTTCAACAGGGAAGCCCTAATAATCAAATGAATTATCGGGGTCAGAACCACAACTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGAGCTATACTCAAACCGGTAACCCAAATTCGTGGAATCCTCCGAATCGGAGCTACCCGCAGTATCAAAATCCTCCGCAGCAGAACAGTCAAAATTTCAATTATCCGCAACAAAGAGGGCCAAACCAATGGAACAATCAAAATCAGGGATACCCTCAATTTGGAATGCCTGGACAGCGGAACCCACAAGTTGAAGAAGATGAAAGGGTGGGTGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAGCAGAACGACGGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCTCCGGAGAGGCCGGAGATGAGACGGGTGTTGGCGAAGTGGGAAAGGCAGAGGTCGGCGAGCAGGGAGTCGACGGTGGTCGGGATTTGGGATTTTTGGGGAGGAGGAGGCGGGCGGCGAAGGCGAAGCAGAAGGACCAAAAGTTTGCCAAGTTCATCCATCCCCCCTAGAAGAAAGACAGAATCAGCTCTGACTCAGAGCCATTACTACACAGCAGAGACTGCAGTTGATACTGCTATCTCCATTCCTCTTACTGCCTCAGATAGTGATGTTTCAGACCATAAACCTGAAAGAGATGGCATCACTCTGGCTTAA

Protein sequence

MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPPPQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHNSHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQGYPQFGMPGQRNPQVEEDERVGEGRGAVEAGGGFVEEQNDGVVEEAEADGDAPERPEMRRVLAKWERQRSASRESTVVGIWDFWGGGGGRRRRSRRTKSLPSSSIPPRRKTESALTQSHYYTAETAVDTAISIPLTASDSDVSDHKPERDGITLA

Homology

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BLAST of Lag0014771 vs. NCBI nr
Match: XP_022927876.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 5.8e-87
Identity = 169/196 (86.22%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS F KVRS LPSRF FSC NQTETLIKAL TSA PNDFSNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFLKVRSSLPSRFIFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNRDYVQQGS NNQMNYR +N +
Sbjct: 61  PQQHSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVQQGSSNNQMNYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVE 197
           GYPQFG PGQ NPQVE
Sbjct: 181 GYPQFGRPGQGNPQVE 196

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BLAST of Lag0014771 vs. NCBI nr
Match: XP_023530084.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.2 bits (840), Expect = 8.4e-86
Identity = 169/206 (82.04%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQ SSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNRDYV QGS NNQMNYR +N +
Sbjct: 61  PQQRSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMNYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQR PNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRSPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVEEDERVGEGRG 207
           GYPQFG PGQ NPQVE   ++    G
Sbjct: 181 GYPQFGRPGQGNPQVENSYQLNNQAG 206

[Close]

BLAST of Lag0014771 vs. NCBI nr
Match: KAG6588655.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.4 bits (838), Expect = 1.4e-85
Identity = 169/201 (84.08%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNF PP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNF-PP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNRDYV QGS NNQM+YR +N +
Sbjct: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVEEDERV 202
           GYPQFG PGQ NPQVE   R+
Sbjct: 181 GYPQFGRPGQGNPQVENSYRL 200

[Close]

BLAST of Lag0014771 vs. NCBI nr
Match: KAG7013281.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.1 bits (832), Expect = 7.1e-85
Identity = 168/201 (83.58%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNRDYV QGS NNQM+YR +N +
Sbjct: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVEEDERV 202
           GYPQFG PGQ NPQVE   R+
Sbjct: 181 GYPQFGRPGQGNPQVENSYRL 200

[Close]

BLAST of Lag0014771 vs. NCBI nr
Match: XP_022988718.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-82
Identity = 163/196 (83.16%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ Q QWGSPSQVH  SGNFNNQSFSEF NRDYV QGS NNQ+NYR +N +
Sbjct: 61  PQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPG SRQGQ Y+  GNPNSW+P N+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVE 197
           GYPQFG PGQ  PQVE
Sbjct: 181 GYPQFGRPGQGKPQVE 196

[Close]

BLAST of Lag0014771 vs. ExPASy TrEMBL
Match: A0A6J1EIR6 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434643 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.8e-87
Identity = 169/196 (86.22%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS F KVRS LPSRF FSC NQTETLIKAL TSA PNDFSNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFLKVRSSLPSRFIFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNRDYVQQGS NNQMNYR +N +
Sbjct: 61  PQQHSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVQQGSSNNQMNYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQ Y+Q GNPNSWNPPN+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVE 197
           GYPQFG PGQ NPQVE
Sbjct: 181 GYPQFGRPGQGNPQVE 196

[Close]

BLAST of Lag0014771 vs. ExPASy TrEMBL
Match: A0A6J1JN43 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485971 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 9.4e-83
Identity = 163/196 (83.16%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ Q QWGSPSQVH  SGNFNNQSFSEF NRDYV QGS NNQ+NYR +N +
Sbjct: 61  PQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPG SRQGQ Y+  GNPNSW+P N+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVE 197
           GYPQFG PGQ  PQVE
Sbjct: 181 GYPQFGRPGQGKPQVE 196

[Close]

BLAST of Lag0014771 vs. ExPASy TrEMBL
Match: A0A6J1JDU2 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485971 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 164/206 (79.61%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRRARTPILIS FFKVRS LPSRFTFSC NQTETLIKAL TSA PNDFSNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQHSSSDPR+ Q QWGSPSQVH  SGNFNNQSFSEF NRDYV QGS NNQ+NYR +N +
Sbjct: 61  PQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSENQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           SHPNPG SRQGQ Y+  GNPNSW+P N+SYPQYQNPPQ N+Q+FNY QQRGPNQWNNQNQ
Sbjct: 121 SHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGMPGQRNPQVEEDERVGEGRG 207
           GYPQFG PGQ  PQVE   ++    G
Sbjct: 181 GYPQFGRPGQGKPQVENSYQLNNQAG 206

[Close]

BLAST of Lag0014771 vs. ExPASy TrEMBL
Match: A0A6J1GL94 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455360 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.6e-82
Identity = 166/206 (80.58%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRR RTPI ISSF KVRSPLPS FTFSC N+TETLIKALSTSA P+DFSNFP P
Sbjct: 1   MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNRTETLIKALSTSAFPDDFSNFPTP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQ SSSDPRY QGQWGSPSQVH  SGNFNNQSFSEFQNRDYVQQGSP+NQMNYR QN +
Sbjct: 61  PQQPSSSDPRYLQGQWGSPSQVHRPSGNFNNQSFSEFQNRDYVQQGSPSNQMNYRSQNQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           S+PNPGF RQGQSYTQ GNPNSWNPPN+SYPQYQNP Q N QNFNY QQR PNQW+NQNQ
Sbjct: 121 SYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQNQ 180

Query: 181 GYPQFGMPGQRNPQVEEDERVGEGRG 207
           G PQFG PGQRN Q E   ++    G
Sbjct: 181 GLPQFGKPGQRNLQAENSYQLNNQAG 206

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BLAST of Lag0014771 vs. ExPASy TrEMBL
Match: A0A6J1I4R8 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111470986 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 163/206 (79.13%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISSFFKVRSPLPSRFTFSCENQTETLIKALSTSAIPNDFSNFPPP 60
           MASLMAVRR RTPI ISSF KVRSPLPS FTFSC NQTETLIKALSTSA P+DFSNFP P
Sbjct: 1   MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNQTETLIKALSTSAFPDDFSNFPTP 60

Query: 61  PQQHSSSDPRYHQGQWGSPSQVHPSSGNFNNQSFSEFQNRDYVQQGSPNNQMNYRGQNHN 120
           PQQ SSS PRY QGQ GSPSQVH  SGNFNNQSFSEFQNRDYVQ GSP+NQMN R QN +
Sbjct: 61  PQQPSSSHPRYLQGQRGSPSQVHRPSGNFNNQSFSEFQNRDYVQLGSPSNQMNNRSQNQS 120

Query: 121 SHPNPGFSRQGQSYTQTGNPNSWNPPNRSYPQYQNPPQQNSQNFNYPQQRGPNQWNNQNQ 180
           S+PNPGF RQGQSYTQ GNPNSWNPPN+SYPQYQNP Q N QNFNY QQR PNQW+NQNQ
Sbjct: 121 SYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQNQ 180

Query: 181 GYPQFGMPGQRNPQVEEDERVGEGRG 207
           G PQFG PGQRN Q E   ++    G
Sbjct: 181 GLPQFGKPGQRNLQAENSYQLNNQAG 206

The following BLAST results are available for this feature:

BLAST of Lag0014771 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927876.1	5.8e-87	86.22	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur...	[more]
XP_023530084.1	8.4e-86	82.04	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur...	[more]
KAG6588655.1	1.4e-85	84.08	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7013281.1	7.1e-85	83.58	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022988718.1	1.9e-82	83.16	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]

BLAST of Lag0014771 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0014771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIR6	2.8e-87	86.22	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc...	[more]
A0A6J1JN43	9.4e-83	83.16	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]
A0A6J1JDU2	1.6e-82	79.61	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]
A0A6J1GL94	3.6e-82	80.58	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc...	[more]
A0A6J1I4R8	2.4e-78	79.13	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc...	[more]

BLAST of Lag0014771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0014771.1	Lag0014771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding