Lag0014710 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0014710
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPAP_fibrillin domain-containing protein
Locationchr12: 3826868 .. 3833291 (-)
RNA-Seq ExpressionLag0014710
SyntenyLag0014710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTCCCTCCTCCAGGGACTTCCATTTTCTCCTTTTTGTGGAAGGTCAAAATCCCCAAGAAAGTGAAGTTCTTTGCCTGGGAAGTTTTACATGGTTGGGTGAATACTCGGGATCAGATCCAAAGGTTCTCCTCCTTCGTGTTGCGGCTGCAGTGGCGTGTCCTTTGTAGGAGGATCTAGATCATTTGCTTTGGGATTGTTCGTTTGTTTGTTCTATTTGGAGTTAGTTCTTTAGGGTGTTTGAGGTTGCTTCGGCGCGTAACATTTTGATTGCTCCTCTATGTTTGAGGAAATCCTTTGGCATCCCCCTTTTCGTGACAAAGGGAGAGTTCCTTGGCAAACTTGCTTCTTTGCTATTTTGTGGAGTATATGGCTCGAGAGGAATAGTAGAATTTTTAGAGAGGTGGAGAAATCCACGAATGAGCTTTGGAAGACGATTAGATTTAACTCGTCTTTGTAGGCGTCTATTTCTAAGCTTTTTTTTGTAATTTTCAGCTTGGTCTTGTTAATTTGGACTGGGACTCGTTCCTGTAGTCTAGGCGAGTGTTTTTGGCGGACTTGTTTTTTGTATTTCCTCTTGTATTCTTTCATTTTTTCTCATTGAAAGCATGATTTAATTATTATTTGTTATTGTTCTTTTAATTAGCTAGCAATATGAATGGGGTATTATAGTAATTATCATATGTGTTTGGTTCCTATTTTGATTCCAGACAATTTATAGTAAACATTACCAATAGGTTTTTGATTCTGATTTGAGACAATTTTTAGTAAACAACATCAAAGGAATAGATTCCAATTCTCATTAATTTCATTTCAGTCGATTTTTATTCCAATTCTTGGTAAGTAAACATGCCCAAACAACATTGAAATAAGAGGAAAAATATCCGTATAAGATTTATAGTAAAGATTTTTCACTGAGTACTATGTTAAATTATCATTTGTTTAAAATTTGTGCTATGGAGTTAGGGTGGACTTAATCATTTAATTAATTCTTAACAGTTGTATTTTGATAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTATAAGTTACCGTTCCCTTCATTGTATTTGATGTTACACTTTATATCTTTCTTTTACTCCCTAATTATAATTGTATGTCAATGGATCATGTTTGTACATAGTGTAATTTCTGTAAATTGCACTTATTAGTCTTTATCTTTGCTCTCCAAATGCCATATCAAATGAAGTTAGTTTGGAACCAAGATACGAACTGGAATAATATCATACATAGATGCAAGATGGATCATTTATCTTATATAATAGTTATCCACTTACTCAGAAAAATGGAAATGCATTGAAATGAGGTTAATGTTTCAATCAAGTACCAAGTTTTGATAAAAAATTTAATATTTAGTCTGTTAATACATGTGCAAAGTTTACTATAGTAGCTAAGCTTTATCCGTACAAGTTACTAATAACAATAGGGACCAAGCCATGAAGGTTTAACCATTCTAGAAAATTCCTTTTTTTTTTTTTTTTAGTTCAACAACATTCTAGAAAATTACCACCAAACTTGTGACTAGGAAGGGCTCAGCTAGCTGCTAACTGATTGACCCAGAGAATGAAAGTTAAAATTGGAAGACATCTAAAATTTGGACCCCAAGCCTAAATGTGGACGGATGAAGAGGAAGAGATAAGCAGCTGTCTTCTAATCCCTTCTACCAAGGCAACATCTGTTTGGATTTAGTTAGAAGGTGAGATTTCTTTTCTGGGTTTTATCCTGTGTATTTAAATCCCCAAGCCTTAGCTACCAAAGGAAGAATTTATACGTTTTCAGGAAAAGTTAAATTCTTAAGTCTCTTACAAAAAGGATGAAATATTGAAATGACTTTCTCCCTTCATAAGATGGGAGAAAAGAGACGTGACCATATAAGAGTTTAACTTGTCTCGAACCCACTTTTTAGTGTTATTTTCGACTAAAAGAAACAAGTCTTCACAATGATTAAAAAAAAAAAAATCTAATCATCTCCTTCTCTATTCCACAACTTATGGTAAAGAGAGATGTTCCAATCTTTGCAGATGGAGTCATAGGCCAACAGGAAATAATTCTGCCAGATAGCTTTCATCTTTCCAATGGTGAAGCTAAAGAAGAGTGGTAGAACCATCTCTAATAACTTGCTTTGTATCCTCATTGTCATAAAAGAGGAAGCTAAAGTAACACTTTTGACCAAGGACATCTAGGACTAGATGATTTTGAGGTGTTAGGTGCAGGGTTCTTGATCCTATTGTCATGTTTTGATGTTTCTGCTAGGGGAGAAAAAAGGAACTTTTGAGCGTCCAACTTACACCGGCATGGTGTTTGTCAAGATGACACCAATGGTGAAGTTTCTCCATGGTTTTTGTTTGTTTACGCACAAAAAAAAAAAAAAATATTAATAATCTTGATATAGTTATTCAAAGGGCAATCAAGTCTAACTGGAGCTCTAAAAATTTTCTAGGCCCTCTATTGATGCTTGGGCTCCTTAGGTATCATTCTTCTCCTTTGGAATGAGCTTGCTATTTAGGGGTTGGAGGAGGTACAAGATATAAGATGAAAGTACTTGAGAGATTGTATGACTCTTGGTTAAAATGTTCAATAGGCAGTCTTTTTAATATTTCGAGTTTCTATACATGTTTGATCGTTGAGATTGAAGAAGCATTGCAAAAAGAATCTAACAATATATCAAAGAGGTGCTTATCTATTTTTCTCAATTAGATGGTGAGTTCTTGTTAGGGAATTGGTAATTATAGCTCCAACTCGTGTGTTCAAGTTCTTGTCCTTTTTGTAGGTCACAGCAAACTTGAAACCTTTAAACACAAGGAAAGTTGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGGTAAGTCTTCTGGTTTCTTTGATGATCTTTGTTGGGAATTCCATAATATAGATCAAACTATATTTTGTGCTTGAATTTGTCAAACTCTGGAATTAAGTTTCTTGCAATAATAGAAATGAGAAGTTACATTAGTGGATAGTGTGGATGTCTTTTATAGGACTTGTGAATGAAACTTTTTACCAGGACCTTACATCGAAAGAATAGATCTCCTTGGCTTACTTTATCCATAGGAAAGCTGCTTCATTGTGGCCCTTGAATTTTAAGCCTCCTAACTTTCAAAATAAGTTCAACGTACAATGCTTTTTCTTTCATTGAAATCTTTTAATTAATGGATTGAAGCATTTTAACTATGAGTATTTAGGTTTCCCGTTGGCAATGGGAAACAAAAAAACTGTCAGGTTCCGACTAAGAGTAAAACTAGTGGGTTCTTGGTGTAAACCAAAGACTTAATTTTTATTGAGAGTGAACTAGCCTTTCAATGATAGCAAAGGCTGCTATTTATACAAATGTAAAGGCCAGTAAGCTAACGGCCAAAATCAAGAAAGGCTAACCGATCTTGAAAAGCCAAAAAATAAAAAATAAAACTCTAATCTGGCTTGGCCAAAACAGAACAGAAAACCAAAAGAACAAATATAAAAGAACCAAGGTTAATTACTAAAAGAACCTACATCAGTTACTATTGTCAGCTAACTTGATTTTGTATTTTCTCCAACCGGCATTGAGTTGGATAAGCTTATGAATGAATTTGTTTTGCTTCCTGAACAAGTTTGGAGTTTCTGTTGCTGGTATGCTTTAGGAATTGCTCTGTTCTTTTATCAGTGGTATTTCGATATTTTCATTGATTAGCCAAGAGGGTGTTTTAACTGGGAGGGGTGGTGGGGGTTCGGAAAAACACTATTAGCAAAAAAGTATGTAAGAATTAGTGCCTAGAAATGCAAAATATTTGGAAATAATTAACTATGTTATAATTGGGAGAAACACAATTATCCTTTCACTCATTTTCCAAATTGCATTAGGGATATCCTTTCACTCATTTTTGTGGGACATCCGTTTCATGGAGCAAAGAAGATCTTGTGGCTTGCTTTAAACAGAGTCTTTCTTTGGTTCTTATGGGGCGAGCGTAATTCGAGGCTTTTCAGGGATTCTTTCTCTTCCTTTGATAAATTTATGGATCTTATTCTCTTTCATGCTTTATAGTGGTATAAATGTCAACACCCTTTTTCTAATTATAGTTTATCTTTTTTGATTCCCAATTGGAAAGCTTTCATGTAATTCACCCTTTGGTGATTGGAGATTTTCTCCTCATTTCATTCATCAATGAAATTCGTTTCTCTTCTAAAAAAAAAAAAAAAAGAGTAATATTGGGGCTAGTACCCAAAATTACTTTTGATTATGCCAGAAAAATTTTAAAAAGTACTTTTACTTACCTTCTCAATAGTCATCCCAAGGCATAAGAGTTTAGCAATCACGCATGCAAGTTAGTAATTTTGCACTATGAACTACTAAGAAGAAAAAAATAGACTAAAAACTTATGCAGATCGTTCTCAAAATGTTATAATGGGTCCATAAATGAAACTTACGGAATTCTTGAAAATAATATCTAGATTTTCAAACTCAGGTATTCTATAAATTGATGTGAAGACTGCTTTTATAAATTAAACTATCAAATCATTTACTCATTTCACAGAAACTAAGTTAAAGACTATAAAAGACAAGATTTCTGTATGTAGTCATACCAATCTCCTCAGTACCTGGTGGCTGAACGGTATCATATTGGCTGAGCCCCATCATAGACCATGCCACTAAGGTCTCACAATTATCTCTCACCAGTTCTAATTTCATTGATTTAAGTTTTTTTTTCATGTCTTGAACAATAGATACCAGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGGTAAGTTATTGTGCCAAAATAGGCTTTTTTATATTTAGTCTTGTGAGATAGTAATTTTCTAAACCAGACACGACGTTTCTTATCATTTTCTAGTTTTGTTCTGGTTGTGGGAAATCTGCTTGATTTATGGATAACAAGTATCTAATGCTCAGAGTGAAAGTCCATGGTCAGATTAGATGGCATCTATATCAAAATAGAATAAGGAAACCTATTAACATATGAATTATGAACTTATAATGATCATTGATGTAAATGAACTTGAAATAAAAGTTAGTTCAAGAATTAAATTTACAAAAATATTAGTTTAGAGAAAGTTTGTGTCTAAAGGTAGTATGGTAGGCCTTTTCTTTACCACGTTGAATCCAGCATTTCTAATTGCTTTCTATCCTCAGTTAGAATTATTTACAAATGTTACCTCTTTTGTAAGAGGTTTTTGAGTAACTTTTTAAAAAATGTTGTGAGAAGGGAGAGCTTCTTGTTAAATCAAATCATCACTATAATCCAAAAGTCTAAGCAAATAGGTAAATTTAGTCTTATATCAATACTTTTAACATTTTCACTCACTTGTGGACTTGGAAATTTGCACAAGGCTTAACCGATGGTTATCATTATTAATTGGTAAGGAAATGACATCATAGGTATTTACCCACAAGACCTCTTACTCCGATACTATGTTAAATCACCAATGAAAACTCAAAAGCTCAAGTTGGTGAGTTATGGTAAATCTAATCTTTTATCAATACATTCACACTTTCACTTATGGGCTTGAAAATTTACCCAAAACTCAACAAGTGATTATCAATATTAATTAGAAAAGAAATTATCGTACAAAATTTGAGAGAATAAAAATATTATATTGTTTTCAAATAGTTACAACTTAGATCTTGCTAAGGTGTGTGTGATGGTTAACAGACAATCTAATCAGTAACTTCTGTTTTGACAAAAGACCTTAAATCAAACAGATATTTAGTTAAAAAGGCTTACATGGTCATAAAAAGCAGTAAATGGATGAAAACAGGAGTTGAAACATCAACATACGGTCTCTTGGTGGATAACATTACACAAAAAGTTCTTTTGTAACTATAGCATGCTAATGATTATTAACGATTGACGGGCTTTTTTTGAGATAGATTTTGGGAGGAGGTGATCTCCACCCCGGCCCCTAGGTTGTTGCTTATCTCTTTTGGAGGAATATATTCCCTCTTGATGTTTATTATCAAAAAAAATAAAAGCATCAACATATTCGTTGTTAATATGCAGAATAATGGAGCTTTCTCACTATTCTTGTATGTTATACAAATAATACTATGCTTTAGAGGTTTAGATTTTTTTTTTTTTAAATATGGTTTCTAATGAATATGTTTTTATTGGTTCACTTTTAATTCATTGCCACATTTGATTGACATTACTTTTATGCATTCATTCATCACTGGGGTGTTATTGAACTGTTGTATCATTGAATCTTGACAGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGATCGATCCGTCTTATCGAGTACCCGTGTAA

mRNA sequence

ATGCCTCTCCCTCCTCCAGGGACTTCCATTTTCTCCTTTTTGTGGAAGGTCAAAATCCCCAAGAAAGTGAAGTTCTTTGCCTGGGAAGTTTTACATGGTTGGGTGAATACTCGGGATCAGATCCAAAGTTGTATTTTGATAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGATGGAGTCATAGGCCAACAGGAAATAATTCTGCCAGATAGCTTTCATCTTTCCAATGGGGAGAAAAAAGGAACTTTTGAGCGTCCAACTTACACCGGCATGGTGTTTGTCAAGATGACACCAATGGTCACAGCAAACTTGAAACCTTTAAACACAAGGAAAGTTGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGATACCAGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGATCGATCCGTCTTATCGAGTACCCGTGTAA

Coding sequence (CDS)

ATGCCTCTCCCTCCTCCAGGGACTTCCATTTTCTCCTTTTTGTGGAAGGTCAAAATCCCCAAGAAAGTGAAGTTCTTTGCCTGGGAAGTTTTACATGGTTGGGTGAATACTCGGGATCAGATCCAAAGTTGTATTTTGATAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGATGGAGTCATAGGCCAACAGGAAATAATTCTGCCAGATAGCTTTCATCTTTCCAATGGGGAGAAAAAAGGAACTTTTGAGCGTCCAACTTACACCGGCATGGTGTTTGTCAAGATGACACCAATGGTCACAGCAAACTTGAAACCTTTAAACACAAGGAAAGTTGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGATACCAGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGATCGATCCGTCTTATCGAGTACCCGTGTAA

Protein sequence

MPLPPPGTSIFSFLWKVKIPKKVKFFAWEVLHGWVNTRDQIQSCILIEAQAVKIKNKLSRNQCRYTQSSKYGILAILQPDGVIGQQEIILPDSFHLSNGEKKGTFERPTYTGMVFVKMTPMVTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
Homology
[Close]
BLAST of Lag0014710 vs. NCBI nr
Match: XP_023532027.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-30
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFIL 181
           VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFIL
Sbjct: 173 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 232

Query: 182 KMIDPSYRVPV 193
           KMIDPSYRVPV
Sbjct: 233 KMIDPSYRVPV 243

[Close]
BLAST of Lag0014710 vs. NCBI nr
Match: XP_038887592.1 (probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-29
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFIL 181
           VTANLKPLN+RKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFIL
Sbjct: 179 VTANLKPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 238

Query: 182 KMIDPSYRVPV 193
           KMIDPSYRVPV
Sbjct: 239 KMIDPSYRVPV 249

[Close]
BLAST of Lag0014710 vs. NCBI nr
Match: KAG6588812.1 (putative plastid-lipid-associated protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-29
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFIL 181
           VTANLKPLNT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFIL
Sbjct: 173 VTANLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 232

Query: 182 KMIDPSYRVPV 193
           KMIDPSYRVPV
Sbjct: 233 KMIDPSYRVPV 243

[Close]
BLAST of Lag0014710 vs. NCBI nr
Match: XP_022156963.1 (probable plastid-lipid-associated protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-29
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFIL 181
           VTANL PLNTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFIL
Sbjct: 169 VTANLMPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 228

Query: 182 KMIDPSYRVPV 193
           KMIDPSYRVPV
Sbjct: 229 KMIDPSYRVPV 239

[Close]
BLAST of Lag0014710 vs. NCBI nr
Match: KAG7022580.1 (putative plastid-lipid-associated protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-29
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFIL 181
           VTANLKPLNT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFIL
Sbjct: 173 VTANLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 232

Query: 182 KMIDPSYRVPV 193
           KMIDPSYRVPV
Sbjct: 233 KMIDPSYRVPV 243

[Close]
BLAST of Lag0014710 vs. ExPASy Swiss-Prot
Match: Q9LU85 (Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP4 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 51/71 (71.83%), Postives = 63/71 (88.73%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFIL 181
           VT ++KPLN++KVAV+   FKILG IP+KAP  ARGELEIT++DEELR+SRGDKGNLFIL
Sbjct: 172 VTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFIL 231

Query: 182 KMIDPSYRVPV 193
           KM DP+YR+P+
Sbjct: 232 KMFDPTYRIPL 242

[Close]
BLAST of Lag0014710 vs. ExPASy Swiss-Prot
Match: Q6DBN2 (Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP5 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.2e-20
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0 

Query: 122 VTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARGELEITFLDEELRISRGDKGNLFI 181
           VT +L PLN++ VAV+   FKILG IPVKAP G ARGELEIT++DEELRISRG    LFI
Sbjct: 163 VTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELRISRGKGNLLFI 222

Query: 182 LKMIDPSYRVPV 193
           LKM DP+YR+P+
Sbjct: 223 LKMFDPTYRIPL 234

The following BLAST results are available for this feature:
BLAST of Lag0014710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023532027.13.8e-3098.59probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp... [more]
XP_038887592.11.1e-2997.18probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida][more]
KAG6588812.11.9e-2997.18putative plastid-lipid-associated protein 4, chloroplastic, partial [Cucurbita a... [more]
XP_022156963.11.9e-2997.18probable plastid-lipid-associated protein 4, chloroplastic [Momordica charantia][more]
KAG7022580.11.9e-2997.18putative plastid-lipid-associated protein 4, chloroplastic [Cucurbita argyrosper... [more]
BLAST of Lag0014710 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LU851.4e-2471.83Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thalia... [more]
Q6DBN28.2e-2068.06Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thalia... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 9..43
e-value: 2.9E-6
score: 27.9
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 147..182
e-value: 5.9E-10
score: 39.4
NoneNo IPR availablePANTHERPTHR31906:SF14PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATEDcoord: 121..192
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 121..192
IPR019825Legume lectin, beta chain, Mn/Ca-binding sitePROSITEPS00307LECTIN_LEGUME_BETAcoord: 134..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0014710.1Lag0014710.1mRNA