Lag0014667 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0014667
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotransposon gag protein
Location	chr12: 3280765 .. 3285829 (-)
RNA-Seq Expression	Lag0014667
Synteny	Lag0014667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAAGTAAACAGCGAAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCATCCTAAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAATTTTGAACTACGTTATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTGCAAACAAAAAAAAAAAGTGCAACAAATATTGAAGCACGACGATATAAATTGAGGAAATTCATCACTAGTGGGGGCAACACAGCGAATGCAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCTTCCCCAATTCGAAGTTTCACGCTTCGCTGCAGTTCCTTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCTTCGTGAGTTCTTCTCCAAGTTGAAGTTCTCACGTGTTCGTGAGTTCCTTCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGAAGTTCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGGCTTCGATGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCCTTCTCTCCACTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCCTTGCTACTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTCCTCCAAGTTCGAAGGTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGACGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCATCCGCTGCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCGCTTCATCTTCAAAAATTGATTGTTGATAACTTCCTTCATATTCAAAAGTTGACGGTTGAAGTCTTCGCTACATCTGCAAAGATGAACAACTTTAGTGTTGCCTTTATCTTGAAAGTGTCCAGACTGGAAGATGCATCTTAGCTGCAAGTTAAAAAAATGCTTGATATCAAACCACAAAAAAAAAAAAGAAAGAAAGACAATAAAAGTGTTGTTAAAAAAACGGTGACCACCCCTGCAGGAAACTACGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAATGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGTTACTCAGATCACCCAATAAAAGGGGACTGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTAAGTCGAGTCTGGTGACACCCTGCAGGTTACTCAGATCACCCATAAATGGGGACTGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATGGGGACTGGTGTAGCAGGAGTGATATCACTGCAAGCGAATTTGGTGACGACTGTTGCAGAAGCTTACACATTCAAGGAAGAAAGAAACAAATTGCAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAGAAAATTAAAAAAAAATAAAAAACGAAAAGTATAAAAAAAAACGAAAATTAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAGTTTCCTACTTGGATCCCTTCTTGAATGCTCTCTGCAATGATGTGTGCTCTCCCCTACTGAGGTTCAGTCTTATTTATAGGGGGAGTTTTAAGTTCAAATCAAAAGTTTAGATAAAGATTTGACTCAAATGAAATCCTATCTCCTGTTCAAAATATTATGGGATAATCTTATCTTTATCTTTATCTGAACCAACTTAATTAAATTGAAATTCTTAACAGATAAGTATTTCAATTCAAATCAATTTGGGAATTCAAATTTTATCTAAATAATTTTATTTGGGCATACTCCAAATTTTTCTTCCAAATCAAAATTTGAGATTCAAACATCAAATTCTATTCCAAATGCAAATTTGAATTTGGTAAAATTTTACCTCAAATTAAATTTTGGCCATAATCCAAATTCTATCCCAAATGGACCAGAGTCCAAACCTCAAGTTCTATTCCATTTGCAAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAACCAAAATTTTCCAAACTTGAAATCAAAGTTTCCTGCCAAACAAGAAAAATCAAAATTTTGACCAAACCTCAAATTTTGATTAATTGGCATAAAAGTGTGTCAAATAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACGCACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACATAACTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACAAGTTGCCACGTCATTACTATAAATTAATGATAAAATAAATTTGGGACCAGTTACACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATCAGATAACATCAGCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGGGGGATCAGATTCGGAGATTCAGGGATTCAGCCAGAGGCAGAGAGGCAGAGTCCAGAGTCATCAGAATGAGAGTCTAGAGAATTCAGAAGATCCAAGATTTAGAATTCAACCAACTCAAGACTCAGAAGTTTGAAGACTAGAAGACTCTAAAAGAGATCAATAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGTGATCCAAGAGATCAACAAGCCAACGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAATTGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGTAGACCGATCATCCAAAAGATCAACAAGTCACAACAGGCTGATCCAAGAGATCATTAA

mRNA sequence

ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAAAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCATCCTAAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATTGGGGGCAACACAGCGAATGCAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCTTCCCCAATTCGAAGTTTCACGCTTCGCTGCAGTTCCTTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCTTCGTGAGTTCTTCTCCAAGTTGAAGTTCTCACGTGTTCGTGAGTTCCTTCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCCTTCTCTCCACTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCCTTGCTACTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTCCTCCAAGTTCGAAGGTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTGGTGAAGTCACTGCAATGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCTGAAGGCGAATCTGGTGACTACCCCTGCAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGTGATCCAAGAGATCAACAAGCCAACGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAATTGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGTAGACCGATCATCCAAAAGATCAACAAGTCACAACAGGCTGATCCAAGAGATCATTAA

Coding sequence (CDS)

ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAAAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCATCCTAAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATTGGGGGCAACACAGCGAATGCAGTTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCTTCCCCAATTCGAAGTTTCACGCTTCGCTGCAGTTCCTTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCTTCGTGAGTTCTTCTCCAAGTTGAAGTTCTCACGTGTTCGTGAGTTCCTTCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCCTTCTCTCCACTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCCTTGCTACTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTCCTCCAAGTTCGAAGGTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTGGTGAAGTCACTGCAATGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCTGAAGGCGAATCTGGTGACTACCCCTGCAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAACAATCCAACAAGTGATCCAAGAGATCAACAAGCCAACGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAATTGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGTAGACCGATCATCCAAAAGATCAACAAGTCACAACAGGCTGATCCAAGAGATCATTAA

Protein sequence

MGEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLIKTMMKIRAFKIGGNTANAVASSKFEGSHALRCSSSPIRSFTLRCSSFPSSKVLTRFAAVPSPSSKVLTLREFFSKLKFSRVREFLLQVRRFLRASLQFLPPSSKVLTRFVKFLPPSLKVLTRFAAVPSPSSKVLTRFAAVPSSSSKVLTRFGEVPSSKFEGSYALRYSSFLQVRSSFPQVRRFSHASLQFLPHSSKVLTRFAAVPSPKFEGSHVASLQFLPPSLKVLTSLRSLRFVAVPSSKFEVPSSKFEGFHALCCSSFSPRSKVLTHFATVHFLQVQRFSRASVKFLPPSLKVLTCFGEVPSSKFEGSYALRCSSFLQVRRFSRASLQFLLPKFEVPSSKFEGSHALRCTVPSSKFEGSHALRCYLPPSSKVLSRAAAAPSSKFEGSLTRFARSFSKFEGLLSTAHSPSSKALLSLLLPPSSKVLSRAAAVPPPSSKVPHALRSLLLQVRRRFSPTAPSPSSKVLLSTPLFEGSPLRFSFSKFEGGEVTAMNLMTTVVGESSLVTTLAGVHEGESGDYPCRLLRSPNKMGTGLAGVHLKANLVTTPAANRPIKKINKSAGRSSKRINKLTSRSNKSTIQQVIQEINKPTTDQEDQQVSRPIIQEDQQANRSNRSSSQLTDQEDQQVSRPIIKPIIREDQQVSRPIIQKINKSQQADPRDH

Homology

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BLAST of Lag0014667 vs. NCBI nr
Match: KAA0025725.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 8.3e-20
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRTSVFDRIKP TTR SAFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPST
Sbjct: 129 KQRTSVFDRIKPLTTRSSAFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 188

Query: 63  SVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLIKTMMKIRAFKIG 122
           S FDRLK+T+DQ +R+M +L+ K   +            D  K++  + + MK R   +G
Sbjct: 189 SAFDRLKMTNDQQQREMKSLKAKPFHEE----------NDDDKIRSRVSSRMK-RKLSVG 244

Query: 123 GNTANAV 130
            NT  ++
Sbjct: 249 INTEGSL 244

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BLAST of Lag0014667 vs. NCBI nr
Match: KAA0050736.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-19
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRTSVFDRIKP TTR S FQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPST
Sbjct: 380 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPMSTYTRTSAFKRLSISRSKKHRPST 439

Query: 63  SVFDRLKVTSDQSKRKMDNLEVK 86
           S FDRLK+T+DQ +R+M +L+ K
Sbjct: 440 SAFDRLKMTNDQQQREMKSLKAK 462

[Close]

BLAST of Lag0014667 vs. NCBI nr
Match: KAA0062063.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 4.1e-19
Identity = 64/113 (56.64%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRT VFDRIKP TTR S FQR+SM   EEENQC MSTST+ S F+RLS+STSKK RPST
Sbjct: 481 KQRTFVFDRIKPSTTRSSVFQRLSMVMKEEENQCPMSTSTQTSTFKRLSISTSKKDRPST 540

Query: 63  SVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLIKTMMK 116
           S FDRLK  +DQ +R+M  L+ KL    FLE +      D  K+ + + + MK
Sbjct: 541 SAFDRLKKANDQQQREMKTLKAKL----FLEEKN-----DDGKIHNRVSSRMK 584

[Close]

BLAST of Lag0014667 vs. NCBI nr
Match: KAA0048558.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK28360.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 5.4e-19
Identity = 62/104 (59.62%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 4   QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTS 63
           QRTSVFDRIKP TTR S FQR+SMA  EEENQC     TR SAF+RLS+STSKK RPSTS
Sbjct: 291 QRTSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSAFKRLSISTSKKDRPSTS 350

Query: 64  VFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVK 108
            FDRLK+T+DQ +R+M +L+ K   K   + +  S    H K K
Sbjct: 351 TFDRLKMTNDQQQREMKSLKAKPFRKENDDDKIHSRIPSHMKRK 394

[Close]

BLAST of Lag0014667 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 7.0e-19
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRTSVFDRIKP TTR S FQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPST
Sbjct: 129 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 188

Query: 63  SVFDRLKVTSDQSKRKMDNLEVK 86
           S FDRLK+T+DQ +R+M +L+ K
Sbjct: 189 SAFDRLKMTNDQQQREMKSLKAK 211

[Close]

BLAST of Lag0014667 vs. ExPASy TrEMBL
Match: A0A5A7SMQ5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00040 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.0e-20
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRTSVFDRIKP TTR SAFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPST
Sbjct: 129 KQRTSVFDRIKPLTTRSSAFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 188

Query: 63  SVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLIKTMMKIRAFKIG 122
           S FDRLK+T+DQ +R+M +L+ K   +            D  K++  + + MK R   +G
Sbjct: 189 SAFDRLKMTNDQQQREMKSLKAKPFHEE----------NDDDKIRSRVSSRMK-RKLSVG 244

Query: 123 GNTANAV 130
            NT  ++
Sbjct: 249 INTEGSL 244

[Close]

BLAST of Lag0014667 vs. ExPASy TrEMBL
Match: A0A5A7U974 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00280 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.0e-20
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRTSVFDRIKP TTR S FQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPST
Sbjct: 380 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPMSTYTRTSAFKRLSISRSKKHRPST 439

Query: 63  SVFDRLKVTSDQSKRKMDNLEVK 86
           S FDRLK+T+DQ +R+M +L+ K
Sbjct: 440 SAFDRLKMTNDQQQREMKSLKAK 462

[Close]

BLAST of Lag0014667 vs. ExPASy TrEMBL
Match: A0A5A7V1P3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004060 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-19
Identity = 64/113 (56.64%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           +QRT VFDRIKP TTR S FQR+SM   EEENQC MSTST+ S F+RLS+STSKK RPST
Sbjct: 481 KQRTFVFDRIKPSTTRSSVFQRLSMVMKEEENQCPMSTSTQTSTFKRLSISTSKKDRPST 540

Query: 63  SVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLIKTMMK 116
           S FDRLK  +DQ +R+M  L+ KL    FLE +      D  K+ + + + MK
Sbjct: 541 SAFDRLKKANDQQQREMKTLKAKL----FLEEKN-----DDGKIHNRVSSRMK 584

[Close]

BLAST of Lag0014667 vs. ExPASy TrEMBL
Match: A0A5D3DYN4 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001990 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-19
Identity = 62/104 (59.62%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 4   QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTS 63
           QRTSVFDRIKP TTR S FQR+SMA  EEENQC     TR SAF+RLS+STSKK RPSTS
Sbjct: 291 QRTSVFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSAFKRLSISTSKKDRPSTS 350

Query: 64  VFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVK 108
            FDRLK+T+DQ +R+M +L+ K   K   + +  S    H K K
Sbjct: 351 TFDRLKMTNDQQQREMKSLKAKPFRKENDDDKIHSRIPSHMKRK 394

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BLAST of Lag0014667 vs. ExPASy TrEMBL
Match: A0A5A7TL86 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003640 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-19
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 3   EQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPST 62
           ++RTSVFDRIKP TTR S FQR+SMA  EEENQC  S ST+  AF+RLS+STSKK RPST
Sbjct: 70  KERTSVFDRIKPSTTRSSVFQRLSMAMKEEENQCPTSISTQTFAFKRLSISTSKKDRPST 129

Query: 63  SVFDRLKVTSDQSKRKMDNLEVKLLMKRFLEGETKSHYLDHPKVKDLIKTMMKIRAF 120
           S FDRLK+T+D+ +R+M   + KL    FLE        D  K+ + + + MK + F
Sbjct: 130 SAFDRLKITNDRQQREMKTFKAKL----FLEENN-----DDGKIHNRVPSRMKRKLF 177

The following BLAST results are available for this feature:

BLAST of Lag0014667 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025725.1	8.3e-20	52.76	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0050736.1	1.9e-19	71.08	retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotranspos...	[more]
KAA0062063.1	4.1e-19	56.64	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048558.1	5.4e-19	59.62	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK28360.1 retrotranspos...	[more]
KAA0044978.1	7.0e-19	69.88	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0014667 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0014667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMQ5	4.0e-20	52.76	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7U974	9.0e-20	71.08	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7V1P3	2.0e-19	56.64	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DYN4	2.6e-19	59.62	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TL86	3.4e-19	53.85	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Lag0014667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 716..773
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 675..691
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 716..739
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 662..691

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0014667.1	Lag0014667.1	mRNA