Lag0014655 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCCTCTCCGACGTCGAAGCTCTTTACATCCGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGTGACTGTGGCAAGCATGTCACCGTCGACCCCTCTCGTCTTTGAAAATGAAAGGATCAGAAACTCCTATATTGTGCTTCAGGCTTGGAAACTCGCCACTTTGTCTGATCCTCTGAATCAAACCGCCAATTGGCTCAGATCTGATGTCTGCAGCTACACCGCGCGTCTACTGTGCTCCTGCATTGGACAACCCCAAGATCCGCACCGTCGTCAGAATCGATCTCAACCACAGCGACGTTGTCGGATACCTCCCCAAAGAGCGAGTTCATCTTCCAAACCGAGCCCACCCCCTTCTCACTGCCTCCGCCTTTTGATTACAGGGTGTTGA ATGGTGCCCTCTCCGACGTCGAAGCTCTTTACATCCGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGTGACTGTGGCAAGCATGTCACCGTCGACCCCTCTCGTCTTTGAAAATGAAAGGATCAGAAACTCCTATATTGTGCTTCAGGCTTGGAAACTCGCCACTTTGTCTGATCCTCTGAATCAAACCGCCAATTGGCTCAGATCTGATGTCTGCAGCTACACCGCGCGTCTACTGTGCTCCTGCATTGGACAACCCCAAGATCCGCACCGTCGTCAGAATCGATCTCAACCACAGCGACGTTGTCGGATACCTCCCCAAAGAGCGAGTTCATCTTCCAAACCGAGCCCACCCCCTTCTCACTGCCTCCGCCTTTTGATTACAGGGTGTTGA ATGGTGCCCTCTCCGACGTCGAAGCTCTTTACATCCGCCACCGCCAGCTTCTCTACTACAGAGACGAGTTCGGTGACTGTGGCAAGCATGTCACCGTCGACCCCTCTCGTCTTTGAAAATGAAAGGATCAGAAACTCCTATATTGTGCTTCAGGCTTGGAAACTCGCCACTTTGTCTGATCCTCTGAATCAAACCGCCAATTGGCTCAGATCTGATGTCTGCAGCTACACCGCGCGTCTACTGTGCTCCTGCATTGGACAACCCCAAGATCCGCACCGTCGTCAGAATCGATCTCAACCACAGCGACGTTGTCGGATACCTCCCCAAAGAGCGAGTTCATCTTCCAAACCGAGCCCACCCCCTTCTCACTGCCTCCGCCTTTTGATTACAGGGTGTTGA MVPSPTSKLFTSATASFSTTETSSVTVASMSPSTPLVFENERIRNSYIVLQAWKLATLSDPLNQTANWLRSDVCSYTARLLCSCIGQPQDPHRRQNRSQPQRRCRIPPQRASSSSKPSPPPSHCLRLLITGC Homology
BLAST of Lag0014655 vs. NCBI nr
Match: XP_023007157.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita maxima]) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Lag0014655 vs. NCBI nr
Match: KAG6587943.1 (Leucine-rich repeat extensin-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.6 bits (200), Expect = 5.4e-12 Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Lag0014655 vs. NCBI nr
Match: KAG7021831.1 (Leucine-rich repeat extensin-like protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 81.6 bits (200), Expect = 5.4e-12 Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Lag0014655 vs. NCBI nr
Match: XP_023531535.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 81.6 bits (200), Expect = 5.4e-12 Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Lag0014655 vs. NCBI nr
Match: XP_022933483.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita moschata]) HSP 1 Score: 79.3 bits (194), Expect = 2.7e-11 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of Lag0014655 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11 Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Lag0014655 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.3e-10 Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Lag0014655 vs. ExPASy Swiss-Prot
Match: Q9LHF1 (Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.3e-10 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Lag0014655 vs. ExPASy Swiss-Prot
Match: Q9XIB6 (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.8e-09 Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of Lag0014655 vs. ExPASy Swiss-Prot
Match: O65375 (Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRX1 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08 Identity = 30/59 (50.85%), Postives = 34/59 (57.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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