Lag0014015 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0014015
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionOuter envelope membrane protein 7
Locationchr1: 54468126 .. 54468508 (-)
RNA-Seq ExpressionLag0014015
SyntenyLag0014015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGGTTCTAGGATGGATCACCATCGAGATAGCTTGCAAGCCTTGCCTCGAGAAAGGTCGCGAAGCCATCGATCGCTCTCTCAATCCCGATTACGATCCAGATGATGAAGTCTCCGACATTCGCGCTCCTCTGATTTCAAACGCCGGTTTCAGTCCAGATCTCCACGATTCAAAGCCTACTCATCCATCTTCGGCCGTTTGATGCGCCTAATTTCACTCTCTTCTTCTTCTTCTCCTTTGTTCTTATGAATCGTATTCCGGATTGTAGAATCTTCGGTTCGCGTTGAAGATTTCGCTGTGGAACCGTCTGCTGATCGCCGGTTCTTGAATTGGCACTTCAGGTAA

mRNA sequence

ATGGGAGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGGTTCTAGGATGGATCACCATCGAGATAGCTTGCAAGCCTTGCCTCGAGAAAGGTCGCGAAGCCATCGATCGCTCTCTCAATCCCGATTACGATCCAGATGATGAAGTCTCCGACATTCGCGCTCCTCTGATTTCAAACGCCGAATCTTCGGTTCGCGTTGAAGATTTCGCTGTGGAACCGTCTGCTGATCGCCGGTTCTTGAATTGGCACTTCAGGTAA

Coding sequence (CDS)

ATGGGAGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGGTTCTAGGATGGATCACCATCGAGATAGCTTGCAAGCCTTGCCTCGAGAAAGGTCGCGAAGCCATCGATCGCTCTCTCAATCCCGATTACGATCCAGATGATGAAGTCTCCGACATTCGCGCTCCTCTGATTTCAAACGCCGAATCTTCGGTTCGCGTTGAAGATTTCGCTGTGGAACCGTCTGCTGATCGCCGGTTCTTGAATTGGCACTTCAGGTAA

Protein sequence

MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLISNAESSVRVEDFAVEPSADRRFLNWHFR
Homology
BLAST of Lag0014015 vs. NCBI nr
Match: KAG7034724.1 (hypothetical protein SDJN02_04454, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLISN 60
          MGAITTAVIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPL  N
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 AESS 65
          A+ S
Sbjct: 61 ADLS 64

BLAST of Lag0014015 vs. NCBI nr
Match: XP_023543277.1 (uncharacterized protein LOC111803204 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLISN 60
          MGAITTAVIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPL  N
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 AESS 65
          A+ S
Sbjct: 61 ADLS 64

BLAST of Lag0014015 vs. NCBI nr
Match: XP_022925903.1 (uncharacterized protein LOC111433180 [Cucurbita moschata] >KAG6581432.1 Outer envelope membrane protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.8 bits (286), Expect = 3.8e-22
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLISN 60
          MGAITTAVIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPL  N
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 AESS 65
          A+ S
Sbjct: 61 ADLS 64

BLAST of Lag0014015 vs. NCBI nr
Match: XP_008439626.1 (PREDICTED: uncharacterized protein LOC103484363 [Cucumis melo] >KAA0052538.1 outer envelope membrane protein 7 [Cucumis melo var. makuwa] >TYK13288.1 outer envelope membrane protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 6.4e-22
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0

Query: 1  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLISN 60
          MGAITTAVIAIGAVV GWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPL  N
Sbjct: 1  MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 61 AESSVRVED 70
             +  ++D
Sbjct: 61 HNFTPDLDD 69

BLAST of Lag0014015 vs. NCBI nr
Match: XP_022979009.1 (uncharacterized protein LOC111478783 [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 8.4e-22
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLISN 60
          MGAITT+VIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPL  N
Sbjct: 1  MGAITTSVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 AESS 65
          A+ S
Sbjct: 61 ADLS 64

BLAST of Lag0014015 vs. ExPASy Swiss-Prot
Match: Q9SVC4 (Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.3e-04
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0

Query: 7  AVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDD 49
          A + + A+ LGW+ IEIA KP L+K R +ID+S +P  DPDD
Sbjct: 10 ATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKS-DPTKDPDD 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7034724.13.8e-2289.06hypothetical protein SDJN02_04454, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023543277.13.8e-2289.06uncharacterized protein LOC111803204 [Cucurbita pepo subsp. pepo][more]
XP_022925903.13.8e-2289.06uncharacterized protein LOC111433180 [Cucurbita moschata] >KAG6581432.1 Outer en... [more]
XP_008439626.16.4e-2284.06PREDICTED: uncharacterized protein LOC103484363 [Cucumis melo] >KAA0052538.1 out... [more]
XP_022979009.18.4e-2287.50uncharacterized protein LOC111478783 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SVC46.3e-0452.38Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 S... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33982:SF1OS07G0154300 PROTEINcoord: 1..64
IPR038944Outer envelope membrane protein 7-likePANTHERPTHR33982OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATEDcoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0014015.1Lag0014015.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane