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Lag0013522 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGAATAAGCAAAGCGCTTCTGAAAGAAGCGGGCTCTGGTCTCACCAAGACTCTCTCCGAGATTCTGATCTGCCCGCTCTCCAAACAACCTCTAAGGTAATGATTCGATATGAATTCTACCATTTTCTTTCATTCTCGTAAATTTGTTCTGCAAAATTTGGTTTGATTCTGTGTTTCTGCCGTTAGGTATTGCGAAGCGTCAAATTCTCTGATCAGCGATGCGATTGGTGTTTCTTTTCCTGTGAGTACATGAAGAGAAAATTTGCATTCCAGTTCTGTTTTCATCTAGAAAATTTCCCTTCCTATATTTGCTCTCTGTTTCTTTTTTTTAGACCACTTAGAGTTCTGTAGCTGTTATCTGACTTGCCCAGGTAGTGAAAGCTTACATTAACTTTGAGCGATATTTTGATCTACCGACTGATGGATCAAGACACTCCTTGGTTTGATTAGTTTAATGAAATAGTTCTCAATGTTGCAAGATTAGGTAGTGAAAGTGGCCGTAGGAACCAGAATTTTGTGTTGGAAACCCTTGGGTTTCTTTTCCTCTTTTCTCCCCTCATTTGTGGGAGTTAGGCTACAAGACATGTGCCTGTTTCTATTTTATGTTGTAATTCATTTGTCTTGCTTATGGTTATGTTAGATAAAGGGCGGAATCCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGATGATCCATTGAAAGGTGAGGATAATGTTGAGATTCCTCGAGAAAGATGA ATGGTGAGAATAAGCAAAGCGCTTCTGAAAGAAGCGGGCTCTGGTCTCACCAAGACTCTCTCCGAGATTCTGATCTGCCCGCTCTCCAAACAACCTCTAAGGTATTGCGAAGCGTCAAATTCTCTGATCAGCGATGCGATTGGTGTTTCTTTTCCTGTAGTGAAAGCTTACATTAACTTTGAGCGATATTTTGATCTACCGACTGATGGATCAAGACACTCCTTGATAAAGGGCGGAATCCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGATGATCCATTGAAAGGTGAGGATAATGTTGAGATTCCTCGAGAAAGATGA ATGGTGAGAATAAGCAAAGCGCTTCTGAAAGAAGCGGGCTCTGGTCTCACCAAGACTCTCTCCGAGATTCTGATCTGCCCGCTCTCCAAACAACCTCTAAGGTATTGCGAAGCGTCAAATTCTCTGATCAGCGATGCGATTGGTGTTTCTTTTCCTGTAGTGAAAGCTTACATTAACTTTGAGCGATATTTTGATCTACCGACTGATGGATCAAGACACTCCTTGATAAAGGGCGGAATCCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGATGATCCATTGAAAGGTGAGGATAATGTTGAGATTCCTCGAGAAAGATGA MVRISKALLKEAGSGLTKTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPVVKAYINFERYFDLPTDGSRHSLIKGGIPCLVPKDGRIIETDDPLKGEDNVEIPRER Homology
BLAST of Lag0013522 vs. NCBI nr
Match: XP_022949957.1 (uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 uncharacterized protein LOC111804007 [Cucurbita pepo subsp. pepo] >KAG7034074.1 hypothetical protein SDJN02_03801 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30 Identity = 75/109 (68.81%), Postives = 82/109 (75.23%), Query Frame = 0
BLAST of Lag0013522 vs. NCBI nr
Match: XP_022977422.1 (uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]) HSP 1 Score: 140.2 bits (352), Expect = 1.1e-29 Identity = 74/109 (67.89%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Lag0013522 vs. NCBI nr
Match: XP_008440859.1 (PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo] >KAA0025649.1 UPF0434 protein [Cucumis melo var. makuwa] >TYK12522.1 UPF0434 protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28 Identity = 72/109 (66.06%), Postives = 77/109 (70.64%), Query Frame = 0
BLAST of Lag0013522 vs. NCBI nr
Match: XP_038883681.1 (UPF0434 protein Ecaj_0131 [Benincasa hispida]) HSP 1 Score: 134.0 bits (336), Expect = 7.6e-28 Identity = 72/109 (66.06%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of Lag0013522 vs. NCBI nr
Match: XP_022132378.1 (uncharacterized protein LOC111005251 isoform X2 [Momordica charantia]) HSP 1 Score: 130.6 bits (327), Expect = 8.4e-27 Identity = 70/101 (69.31%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of Lag0013522 vs. ExPASy Swiss-Prot
Match: Q5M8Z2 (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06 Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of Lag0013522 vs. ExPASy Swiss-Prot
Match: Q5U1Z8 (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 9.4e-05 Identity = 18/40 (45.00%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Lag0013522 vs. ExPASy Swiss-Prot
Match: Q2T9V7 (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0
BLAST of Lag0013522 vs. ExPASy Swiss-Prot
Match: Q96I23 (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04 Identity = 18/40 (45.00%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of Lag0013522 vs. ExPASy Swiss-Prot
Match: Q9D1C3 (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.7e-04 Identity = 16/40 (40.00%), Postives = 30/40 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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