Lag0013390 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0013390
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal export protein NMD3
Location	chr1: 49883339 .. 49887554 (+)
RNA-Seq Expression	Lag0013390
Synteny	Lag0013390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAGAAACAGGATTGTTTTCGGTTCAACAGACCATTGGCAGCGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACCATTATGCACTGTCCTGATTGCGAGAGTTACTTGCAGCCACCGCGAACTTGGATTAAGGCACAGTTAGAATCAAAGGAACTACTGACATTCTGCATCAAACGGTTAAAGAATTTGAATAAGGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAGCCCCATTCCAAGAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAGGTTCTTCATGGAGCAATTTTGGAACAGTCATACGTTGTTGAGTACGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGGTCCAGGCCAACCCTGACCAGTGGGTGGCTTCTGTTCAACTCAGGCAGCACGTAGCTCACCGGCGTACGTTTTTCTTCTTGGAGCAACTGATACTAAAGCATGGTGCTGCTGCCAATGCCATAAGGATCAAACAGATGGATCAAGGTATTGACTTCTTCTTTTCTAATAGGAGTCATGGTGTGAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCGATCAGGAGTCGCCACGATAAACAACTTGTTTCTCATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGCGAAGATTTGATATGCTTACCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTCGGTCCTCTTGTAATTTGCACTAAAGTTACAAATGCCATTGCTTTACTTGATCCATTCACTTTAAGGCACTGTTTCTTGGATGCTGATCAGTATTGGAGGACATCCTTCAAGTCTCTACTTACTAGCAGGCAACTTGTGGAATATATTGTACTGGATATAGAGAATGTTTCTACTGAAGTCAATGTCGGTGGTTCGAAGTATGCTTTGGCCGACGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACAATATTCTTCACAAGAACCCATCTAGGACATATTTTAAACCCTGGGGATTATGCCCTTGGTTATGATCTGTATGCAGCCAATAGTAATGATATGGAGCTAGACAAATATAAGGGTCTTGAGCTTCCGGAAACAATTTTGATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGAAAGCCTCGATCATGGAAGCTTAAATCTCTTGAAATGGATGTTGATGATAAAGGTAGAACAGATCAAGATAAGATGAACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATATGAGGTTCAACATATCATTGTACCGAAATAAAGAATACCAACCCTCTGAAATGACAGACGGGGAAGATGGACCTTCGGTACCAATTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGACGGAGACGATGGCATGCACGAGTAAAGAGCGTTCTGATCGTCTTTCTTGGTTAGAAATGTGTGGTCGGGCATTTGAACCTCTGATTTTTAGAGAAGGTAGTAGTGCGTTAATTGTTGAACTATGCTCATTTTGGCTATCATGACGAGGCGTTGAACGGTGTGTTATTGCTTGTAATTTCATTTATATAGCATACGATTTATTTTGGTTTGTTTACAACAATTTTTTCTCTTAATTCTCTGTCGCTTTGAGCTTTCATTTGTCAGCAATTCCTTTACAAATGTGGTGATGAAACTAGTATCAACTATCATTCCAATTACTGTTTGAAACAACAAGATGAAGAACTTTACTAATTAGTAACTATTTAATATATAAAAATCAATACAAATTTAAATTCTATACTATTTGAATATCTTCATTGTGACATTTAATTAAATTCAATAATAAGCAATTTTTTAAATATCATTTTGACTAAAAAGATCAAAAGCTCTGAATATTCACCACCTTCCCCTCTAGTTTGAACTCATAATAATAATAATAATAATAAATAAAAAAATAAATATAGTAGCTAGAAAATAAGGGCAAAATATACCATTTGTTCAGCTTCTAAGCAGATTTAAATTCTTCATTCTCCTAAGTATTGAGATCTTCTCATTGATAAACTTCTTCCTCTTTTCACTATCTGAAACCTGTCATGGAGTTCATTGATATCAGAGCCAGAGATCAAATTTATCTTAGGTCCCTGTTGATATCAAAGATTCATGGTGAAATAATGGAAGATTGTGCCTTTTCTCTTTCCCCTTTATCTGTTACCTACGTGACTTCATGCAAGTAATTTGAAATATGAAATCAAAAAATTTGGTCATGTCATTCATAATTGTACATGTCAGCAAAGTGAATTAAACACTTAACCGTCATGTTTTTTTTTTTCTTTTGTTAAGAAAAAATTTTAAATCGGATTAGTATGGATACTACCTCATTTATTAAAAAAAGAAAAGAAAAAGAAGAATGATGTCCTATCTTAGTAGAGAAGTTGTTTGTTATAGGTAATTTTGGACCACCACAGCGTACGAGGAGCTGACAGGACAACCGAGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAAACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCAAGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTATCGCTTCCAGCTACCTCGGTCCAGCCTGCTTCGTCCCGAACACCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCTCTCTTCGTCATCGAAGAAGGGGGCCGAAAACTCGATTCTGGACTTCTTTCTCGATTCTCTAGCTGCTTAGTTTCTAACTTAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCATTGTTGATGTCACGTGAAGGGCAGGTGGATTGCTTGGTCAAATTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGAATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTCAGAGACCAAATGGAAGCCTCGGGTACGAGCAGAAAGCGCCGAGCCAGATTGGGTTCGACCTCGGTATGGAAAAGGCCGACCCTAACTTCGGAGACTGTTGTAAAGTTCGGTGCGTCCACGATGCTGTGGACATGACCCAAGAGGATGACCAGCGGAAGAACTAGAGGTCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCTCAATCGCAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGTAACGTACACAGGAAATAATGATAGGAAAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCATTTGTTACGCAATTCCTAGGAGCCCAGAACCGACAGAAGCCTCAGATCAACTCGTTGACAGTAAAGCAGGGGCTTCGAGAAAGCTTGAAGGATTGTATTAACAGATTTTGTAATGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACTGCTATGATTTCAGGTTTGTAGGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCGACCAGAGGCCAAGGAGCCACAGGGCTGTGCGAACCAAGAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCCTTTGAACAGGTCTTGGCCGCAATACAGGACACAAATTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGACGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCTGA

mRNA sequence

ATGGCCGGAGAAACAGGATTGTTTTCGGTTCAACAGACCATTGGCAGCGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACCATTATGCACTGTCCTGATTGCGAGAGTTACTTGCAGCCACCGCGAACTTGGATTAAGGCACAGTTAGAATCAAAGGAACTACTGACATTCTGCATCAAACGGTTAAAGAATTTGAATAAGGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAGCCCCATTCCAAGAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAGGTTCTTCATGGAGCAATTTTGGAACAGTCATACGTTGTTGAGTACGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGGTCCAGGCCAACCCTGACCAGTGGGTGGCTTCTGTTCAACTCAGGCAGCACGTAGCTCACCGGCGTACGTTTTTCTTCTTGGAGCAACTGATACTAAAGCATGGTGCTGCTGCCAATGCCATAAGGATCAAACAGATGGATCAAGGTATTGACTTCTTCTTTTCTAATAGGAGTCATGGTGTGAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCGATCAGGAGTCGCCACGATAAACAACTTGTTTCTCATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGCGAAGATTTGATATGCTTACCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTCGGTCCTCTTGTAATTTGCACTAAAGTTACAAATGCCATTGCTTTACTTGATCCATTCACTTTAAGGCACTGTTTCTTGGATGCTGATCAGTATTGGAGGACATCCTTCAAGTCTCTACTTACTAGCAGGCAACTTGTGGAATATATTGTACTGGATATAGAGAATGTTTCTACTGAAGTCAATGTCGGTGGTTCGAAGTATGCTTTGGCCGACGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACAATATTCTTCACAAGAACCCATCTAGGACATATTTTAAACCCTGGGGATTATGCCCTTGGTTATGATCTGTATGCAGCCAATAGTAATGATATGGAGCTAGACAAATATAAGGGTCTTGAGCTTCCGGAAACAATTTTGATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGAAAGCCTCGATCATGGAAGCTTAAATCTCTTGAAATGGATGTTGATGATAAAGGTAGAACAGATCAAGATAAGATGAACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATATGAGGTTCAACATATCATTGTACCGAAATAAAGAATACCAACCCTCTGAAATGACAGACGGGGAAGATGGACCTTCGGTACCAATTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGACGGAGACGATGGCATGCACGAAGCCAGAGATCAAATTTATCTTAGGTCCCTGTTGATATCAAAGATTCATGCGTACGAGGAGCTGACAGGACAACCGAGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAAACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCAAGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTATCGCTTCCAGCTACCTCGGTCCAGCCTGCTTCGTCCCGAACACCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCATTGTTGATGTCACGTGAAGGGCAGGTGGATTGCTTGGTCAAATTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGAATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTCAGAGACCAAATGGAAGCCTCGGGTACGAGCAGAAAGCGCCGAGCCAGATTGGGTTCGACCTCGCGGAAGAACTAGAGGTCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCTCAATCGCAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGAGCCCAGAACCGACAGAAGCCTCAGATCAACTCGTTGACAGTAAAGCAGGGGCTTCGAGAAAGCTTGAAGGATTGTATTAACAGATTTTGTAATGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACTGCTATGATTTCAGGTCTTGGCCGCAATACAGGACACAAATTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGACGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCTGA

Coding sequence (CDS)

ATGGCCGGAGAAACAGGATTGTTTTCGGTTCAACAGACCATTGGCAGCGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACCATTATGCACTGTCCTGATTGCGAGAGTTACTTGCAGCCACCGCGAACTTGGATTAAGGCACAGTTAGAATCAAAGGAACTACTGACATTCTGCATCAAACGGTTAAAGAATTTGAATAAGGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAGCCCCATTCCAAGAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAGGTTCTTCATGGAGCAATTTTGGAACAGTCATACGTTGTTGAGTACGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGGTCCAGGCCAACCCTGACCAGTGGGTGGCTTCTGTTCAACTCAGGCAGCACGTAGCTCACCGGCGTACGTTTTTCTTCTTGGAGCAACTGATACTAAAGCATGGTGCTGCTGCCAATGCCATAAGGATCAAACAGATGGATCAAGGTATTGACTTCTTCTTTTCTAATAGGAGTCATGGTGTGAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCGATCAGGAGTCGCCACGATAAACAACTTGTTTCTCATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGCGAAGATTTGATATGCTTACCTCCTAAAGTTGCTGTTAGTTTGGGCAATCTCGGTCCTCTTGTAATTTGCACTAAAGTTACAAATGCCATTGCTTTACTTGATCCATTCACTTTAAGGCACTGTTTCTTGGATGCTGATCAGTATTGGAGGACATCCTTCAAGTCTCTACTTACTAGCAGGCAACTTGTGGAATATATTGTACTGGATATAGAGAATGTTTCTACTGAAGTCAATGTCGGTGGTTCGAAGTATGCTTTGGCCGACGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACAATATTCTTCACAAGAACCCATCTAGGACATATTTTAAACCCTGGGGATTATGCCCTTGGTTATGATCTGTATGCAGCCAATAGTAATGATATGGAGCTAGACAAATATAAGGGTCTTGAGCTTCCGGAAACAATTTTGATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGAAAGCCTCGATCATGGAAGCTTAAATCTCTTGAAATGGATGTTGATGATAAAGGTAGAACAGATCAAGATAAGATGAACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATATGAGGTTCAACATATCATTGTACCGAAATAAAGAATACCAACCCTCTGAAATGACAGACGGGGAAGATGGACCTTCGGTACCAATTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGACGGAGACGATGGCATGCACGAAGCCAGAGATCAAATTTATCTTAGGTCCCTGTTGATATCAAAGATTCATGCGTACGAGGAGCTGACAGGACAACCGAGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAAACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCAAGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTATCGCTTCCAGCTACCTCGGTCCAGCCTGCTTCGTCCCGAACACCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCATTGTTGATGTCACGTGAAGGGCAGGTGGATTGCTTGGTCAAATTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGAATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTCAGAGACCAAATGGAAGCCTCGGGTACGAGCAGAAAGCGCCGAGCCAGATTGGGTTCGACCTCGCGGAAGAACTAGAGGTCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCTCAATCGCAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGAGCCCAGAACCGACAGAAGCCTCAGATCAACTCGTTGACAGTAAAGCAGGGGCTTCGAGAAAGCTTGAAGGATTGTATTAACAGATTTTGTAATGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACTGCTATGATTTCAGGTCTTGGCCGCAATACAGGACACAAATTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGACGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCTGA

Protein sequence

MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTRTHLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSWKLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDGPSVPIEELLADLDLSEGDGDDGMHEARDQIYLRSLLISKIHAYEELTGQPRGDRTRKGTQRETIPTGRANVARPVRSASARLRGPSPFASARPKAEADHSARLRGPSPFASARPLSLPATSVQPASSRTPPNPRSPSRHRRRCGLHHTGVQRFLLVLQVTSSPASTNSLLMSREGQVDCLVKFWHQQLAPSVGKNACQFESHIGGGLQDGSGSETKWKPRVRAESAEPDWVRPRGRTRGQIRHEHSSANGRGRAEAQSQKGPRKFTAKDSARAQNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLGRNTGHKLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMTLGNIDRKAQATSALGDG

Homology

[Close]

BLAST of Lag0013390 vs. NCBI nr
Match: XP_022149109.1 (60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149123.1 60S ribosomal export protein NMD3 [Momordica charantia])

HSP 1 Score: 968.0 bits (2501), Expect = 5.9e-278
Identity = 476/505 (94.26%), Postives = 491/505 (97.23%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGE GLF+VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VL+GAILEQSYV EYVVQDH+CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLNGAILEQSYVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEI PICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEYI+LDIENVS EVNVGGSKY LADAQVARVSDFGRNDTIF  R
Sbjct: 301 YWRTSFRSLLTSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYAANSNDMELDKYKGL LPE IL+KKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL+MDVDDKGR DQDKMNSEYEQFLRDLEENPD+RFNISLYRN+EYQ SEMTDGEDG
Sbjct: 421 KLKSLDMDVDDKGRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP+EELLADLDLSE D DDGM+E
Sbjct: 481 PSVPLEELLADLDLSEQDEDDGMNE 505

[Close]

BLAST of Lag0013390 vs. NCBI nr
Match: XP_008440695.1 (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo] >TYK12635.1 60S ribosomal export protein NMD3 [Cucumis melo var. makuwa])

HSP 1 Score: 961.8 bits (2485), Expect = 4.2e-276
Identity = 470/505 (93.07%), Postives = 491/505 (97.23%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP++ELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. NCBI nr
Match: KAA0036240.1 (60S ribosomal export protein NMD3 [Cucumis melo var. makuwa])

HSP 1 Score: 960.3 bits (2481), Expect = 1.2e-275
Identity = 469/505 (92.87%), Postives = 490/505 (97.03%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNK KLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKAKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP++ELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. NCBI nr
Match: XP_004143504.1 (60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypothetical protein Csa_003669 [Cucumis sativus])

HSP 1 Score: 958.7 bits (2477), Expect = 3.5e-275
Identity = 470/505 (93.07%), Postives = 489/505 (96.83%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLFSVQQTIG+VLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP+EELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. NCBI nr
Match: KAG6586102.1 (60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020926.1 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 958.0 bits (2475), Expect = 6.1e-275
Identity = 472/507 (93.10%), Postives = 491/507 (96.84%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGETGLF+VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           H AAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLRHCFLDA+Q
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSFK LLTSRQLVEYIVLDIENVSTEVNV GSKY LADAQ+ARVSDFGRNDTIF  R
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGL+LPE ILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDK--GRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGE 480
           KLKSLEM+VDDK  GR +QDKM+SEYEQFLRDLEENPD+RFNISLYRN+EYQPSEMTDGE
Sbjct: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPIEELLADLDLSEGDGDDGMHE 506
           DGPSVP+EELLADLDLS GDGD+GMHE
Sbjct: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507

[Close]

BLAST of Lag0013390 vs. ExPASy Swiss-Prot
Match: Q6GNS3 (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.9e-128
Identity = 231/495 (46.67%), Postives = 338/495 (68.28%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGAAANAIRIKQM 194
           +YVVQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    N +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ HG K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFKSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR  F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 315 QLVEYIVLDIENVSTEVNVGG-----SKYALADAQVARVSDFGRNDTIFFTRTHLGHILN 374
           Q+ E+IV+D E +       G     +K+ LA+  V + S+       +  RTHLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
           PGD  LG+DL   N ND  ++K     +P+ +LIKKSY+  R+++R   R+WKLK  EMD
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLK--EMD 432

Query: 435 VDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDGPSVPIEEL 494
            D +G    D+   +Y+ FL DLEE+  +R N+++++N        TD E  P + + E+
Sbjct: 433 RDREGMDTDDE--RQYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLAEM 492

Query: 495 LADLDLS-EGDGDDG 503
           L DL +S +  G++G
Sbjct: 493 LEDLHISQDATGEEG 498

[Close]

BLAST of Lag0013390 vs. ExPASy Swiss-Prot
Match: Q6P2Z6 (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.7e-127
Identity = 227/495 (45.86%), Postives = 334/495 (67.47%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGAAANAIRIKQM 194
           +Y+VQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    N +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ H  K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFKSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR+ F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 315 QLVEYIVLDIENVSTEVNVGG-----SKYALADAQVARVSDFGRNDTIFFTRTHLGHILN 374
           QL E+IV+D + V       G     +K+ LA+  V + S+       +  RTHLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
           PGD  LG+DL   N ND  ++K     +P+ +LIKKSY+  ++++R   R+WKLK +E D
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432

Query: 435 VDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDGPSVPIEEL 494
            +     D+     +Y+ FL DLEE+  +R N+++Y+N        TD E  P + + E+
Sbjct: 433 REGMDTDDE----RQYQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLAEM 492

Query: 495 LADLDLS-EGDGDDG 503
           L DL +S +  G +G
Sbjct: 493 LEDLHISLDATGGEG 498

[Close]

BLAST of Lag0013390 vs. ExPASy Swiss-Prot
Match: Q5BLF0 (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.5e-124
Identity = 224/496 (45.16%), Postives = 338/496 (68.15%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELL  C+K+LK +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q + V
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGAAANAIRIKQM 194
           E+VVQ  +CE C RV+A  D W A VQ+RQ   H++TF++LEQLILKH    N +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
            +GIDF+++ + H  K V+F+    P RS+  ++L+SHD  SN +N+K TFSVEI P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFKSLLTSR 314
           ++++CL P++A SLGN+G + +C +VT++I L+DP TL+   +D   +WR  F SL + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 315 QLVEYIVLDIENVSTE-----VNVGGSKYALADAQVARVSDFGRNDTIFFTRTHLGHILN 374
           QL E+I++DI+ +  +       +  +K+ LA+  V + S+   +   +  RT +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLN 372

Query: 375 PGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
            GD  LG+D   AN ND  L+K     +P+ +LIKKSY+   + KR + R WKLK ++ +
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 435 VDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGED--GPSVPIE 494
             D   TD ++   +Y +FL DLEE+  +R NI+++R+    P E +D +D   P + + 
Sbjct: 433 -KDAADTDDER---QYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLA 492

Query: 495 ELLADLDLSEGDGDDG 503
           E+L DL LS+  G +G
Sbjct: 493 EMLEDLSLSDATGGEG 499

[Close]

BLAST of Lag0013390 vs. ExPASy Swiss-Prot
Match: Q08DS5 (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.6e-124
Identity = 227/504 (45.04%), Postives = 336/504 (66.67%), Query Frame = 0


Query: 10  VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 70  WIKAQLESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 129
           W++  LES++LL  C+K++K  L+KV+LV A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 130 QSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGAAANAI 189
           Q +VV+YVVQ  +C  C RV+A  D W A VQ+RQ   H++TF++LEQLILK+G   N +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEI 249
           RIK++  G+DF++S++ H  K VEF+    P R +  ++L+S D  SN +N+K TFSVEI
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 250 SPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFKS 309
            PIC+++++CL PK+A SLGN+  + +C +VT+ I L+DP TL+   +D + +W   F S
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 310 LLTSRQLVEYIVLD---IENVSTEVNVG--GSKYALADAQVARVSDFGRNDTIFFTRTHL 369
           L   +QL E+IV++   ++++      G    K+ L +  V + S+    D  +F RTHL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEM-NTDKQYFCRTHL 367

Query: 370 GHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSWKLK 429
           GH+LNPGD  LG+DL   N ND  ++K K   +P+ +LIKKSY+  R+++R   R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 430 SLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDGPSV 489
            L     D+  TD D    +Y+ FL DLEE+  +R N+++YR+        TD E  P +
Sbjct: 428 EL---ARDRENTDTDD-ERQYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRI 487

Query: 490 PIEELLADLDLSE----GDGDDGM 504
            + E+L DL +S+    G+G+  M
Sbjct: 488 SLAEMLEDLHISQDATGGEGESMM 502

[Close]

BLAST of Lag0013390 vs. ExPASy Swiss-Prot
Match: Q99L48 (60S ribosomal export protein NMD3 OS=Mus musculus OX=10090 GN=Nmd3 PE=1 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.0e-123
Identity = 222/501 (44.31%), Postives = 336/501 (67.07%), Query Frame = 0


Query: 9   SVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPR 68
           S++ + G +LCC+CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP 
Sbjct: 7   SIEHSPGHILCCECGVPISPNPANICVACLRSKVDISQGVPKQVSISFCKQCQRYFQPPA 66

Query: 69  TWIKAQLESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAIL 128
           +W++  LES+ELL  C+K++K  L+KV+LV A FVWTEPHSKR+KVKL +QKEV++GAIL
Sbjct: 67  SWVQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAIL 126

Query: 129 EQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGAAANA 188
           +Q +VV+YVVQ  +C  C RV+A  D W A +Q+RQ   H++TF++LEQLILK+G   N 
Sbjct: 127 QQVFVVDYVVQSQMCGDCHRVEAK-DFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNT 186

Query: 189 IRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVE 248
           +RIK++  G+DF++S++ H  K VEF+  + P R +  ++L+S D  SN +N+K TFSVE
Sbjct: 187 LRIKEIHDGLDFYYSSKQHAQKMVEFLQGIVPCRYKASQRLISQDIHSNTYNYKSTFSVE 246

Query: 249 ISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFK 308
           I PIC+++++CL PK+A SLGN+  + IC +VT+AI L+DP TL+   +D + +W   F 
Sbjct: 247 IVPICKDNVVCLSPKLAQSLGNMSQICICIRVTSAIHLIDPNTLQVADIDGNTFWSHPFN 306

Query: 309 SLLTSRQLVEYIVLDIENV-----STEVNVGGSKYALADAQVARVSDFGRNDTIFFTRTH 368
           SL   +QL E+IV++   V     S    V   K+ L +  + + S+    D  +F RTH
Sbjct: 307 SLCHPKQLEEFIVIECSTVRDLKRSAGAGVISKKHTLGEVWIQKTSEM-NTDKQYFCRTH 366

Query: 369 LGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSWKL 428
           LGH+LNPGD  LG+DL   N ND  ++K     +P+ +LIKKSY+  ++++R   R+WKL
Sbjct: 367 LGHLLNPGDLVLGFDLANCNLNDEYVNKMNSDRVPDVVLIKKSYDRTKRQRR---RNWKL 426

Query: 429 KSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDGPS 488
           K L  D ++    D+     +Y+ FL DLEE+  +R ++++YR+        TD E  P 
Sbjct: 427 KELARDRENMDTDDE----RQYQDFLEDLEEDEAIRKHVNIYRDATIPVESDTDDEGAPR 486

Query: 489 VPIEELLADLDLS-EGDGDDG 503
           + + E+L DL +S +  G++G
Sbjct: 487 ISLAEMLEDLHISQDATGEEG 498

[Close]

BLAST of Lag0013390 vs. ExPASy TrEMBL
Match: A0A6J1D613 (60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597 PE=3 SV=1)

HSP 1 Score: 968.0 bits (2501), Expect = 2.8e-278
Identity = 476/505 (94.26%), Postives = 491/505 (97.23%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGE GLF+VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VL+GAILEQSYV EYVVQDH+CESCSRVQANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLNGAILEQSYVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEI PICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEYI+LDIENVS EVNVGGSKY LADAQVARVSDFGRNDTIF  R
Sbjct: 301 YWRTSFRSLLTSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYAANSNDMELDKYKGL LPE IL+KKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL+MDVDDKGR DQDKMNSEYEQFLRDLEENPD+RFNISLYRN+EYQ SEMTDGEDG
Sbjct: 421 KLKSLDMDVDDKGRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP+EELLADLDLSE D DDGM+E
Sbjct: 481 PSVPLEELLADLDLSEQDEDDGMNE 505

[Close]

BLAST of Lag0013390 vs. ExPASy TrEMBL
Match: A0A5D3CM67 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002220 PE=3 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 2.0e-276
Identity = 470/505 (93.07%), Postives = 491/505 (97.23%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP++ELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. ExPASy TrEMBL
Match: A0A1S3B197 (60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 2.0e-276
Identity = 470/505 (93.07%), Postives = 491/505 (97.23%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP++ELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. ExPASy TrEMBL
Match: A0A5A7SYS9 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00380 PE=3 SV=1)

HSP 1 Score: 960.3 bits (2481), Expect = 5.9e-276
Identity = 469/505 (92.87%), Postives = 490/505 (97.03%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNK KLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKAKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP++ELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. ExPASy TrEMBL
Match: A0A0A0KGY6 (60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=3 SV=1)

HSP 1 Score: 958.7 bits (2477), Expect = 1.7e-275
Identity = 470/505 (93.07%), Postives = 489/505 (96.83%), Query Frame = 0


Query: 1   MAGETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLFSVQQTIG+VLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSR+QANPDQWVASVQLRQHV HRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTR 360
           YWRTSF+SLLTSRQLVEY+VLDIENVSTEVNV GSKY LA AQVARVSDFGRNDT+F  +
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLELPETILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGLELPE ILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLEMDVDDKGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSEMTDGEDG 480
           KLKSL MDVDDK + D++KMNSEYEQFLRDLEENPD+RFNISLYRN+EYQPSE+TDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPIEELLADLDLSEGDGDDGMHE 506
           PSVP+EELLADLDLSEG+GDD M+E
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Lag0013390 vs. TAIR 10
Match: AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein )

HSP 1 Score: 710.7 bits (1833), Expect = 1.6e-204
Identity = 355/505 (70.30%), Postives = 419/505 (82.97%), Query Frame = 0


Query: 4   ETGLFSVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
           E+G+F+VQQTIGSVLCCKCG+PMAPNAANMCV CL SEVDITEGLQK + I +CP+C  Y
Sbjct: 6   ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65

Query: 64  LQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLH 123
           LQPP+TWIK Q ESKELLTFCIKRLKNLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66  LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125

Query: 124 GAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVAHRRTFFFLEQLILKHGA 183
           GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV+HRRTFF+LEQLIL+H A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185

Query: 184 AANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243
           A+ AIRI+Q+DQGIDFFF N+SH   FVEF+ KV PI  R D+QLVSHD KS+++N+K+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245

Query: 244 FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWR 303
           +SV+I P+CREDL+CLP KVA  LGNLGPLV+CTKV++ I LLDP TLR  FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305

Query: 304 TSFKSLLTSRQLVEYIVLDIENVSTEVNVGGSKYALADAQVARVSDFGRNDTIFFTRTHL 363
           + F+S LTSRQLV+Y V D+E    E  VGG KYAL+  Q+AR SD G+   +F+ +THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365

Query: 364 GHILNPGDYALGYDLYAANSNDMELDKYK---GLELPETILIKKSYEEKRQRKRGKPRSW 423
           GHIL PGD ALGYD+Y AN ND E++KY+      LPE ILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425

Query: 424 KLKSLEMDVDD-KGRTDQDKMNSEYEQFLRDLEENPDMRFNISLYRNKEYQPSE---MTD 483
           KLKSL M++DD +GR D +K + EYE+FLRDLEENP++RFNISLYR+K+YQ SE   MTD
Sbjct: 426 KLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMTD 485

Query: 484 GEDGPSVPIEELLADLDLSEGDGDD 502
           GE  PSVPIEELLADLDLS  + DD
Sbjct: 486 GEGAPSVPIEELLADLDLSFEEEDD 507

The following BLAST results are available for this feature:

BLAST of Lag0013390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149109.1	5.9e-278	94.26	60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribo...	[more]
XP_008440695.1	4.2e-276	93.07	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo] >TYK12635.1 60S ribo...	[more]
KAA0036240.1	1.2e-275	92.87	60S ribosomal export protein NMD3 [Cucumis melo var. makuwa]	[more]
XP_004143504.1	3.5e-275	93.07	60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypothetical pro...	[more]
KAG6586102.1	6.1e-275	93.10	60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lag0013390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GNS3	8.9e-128	46.67	60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1	[more]
Q6P2Z6	5.7e-127	45.86	60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=...	[more]
Q5BLF0	3.5e-124	45.16	60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1	[more]
Q08DS5	4.6e-124	45.04	60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1	[more]
Q99L48	3.0e-123	44.31	60S ribosomal export protein NMD3 OS=Mus musculus OX=10090 GN=Nmd3 PE=1 SV=1	[more]

BLAST of Lag0013390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D613	2.8e-278	94.26	60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597...	[more]
A0A5D3CM67	2.0e-276	93.07	60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B197	2.0e-276	93.07	60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 S...	[more]
A0A5A7SYS9	5.9e-276	92.87	60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0KGY6	1.7e-275	93.07	60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=...	[more]

BLAST of Lag0013390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03820.1	1.6e-204	70.30	nonsense-mediated mRNA decay NMD3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007064	Nmd3, N-terminal	PFAM	PF04981	NMD3	coord: 19..248 e-value: 1.4E-72 score: 244.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 695..730
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 683..762
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..608
None	No IPR available	PANTHER	PTHR12746:SF4	60S RIBOSOMAL EXPORT PROTEIN NMD3	coord: 1..499
IPR039768	Ribosomal export protein Nmd3	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 1..499

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0013390.1	Lag0013390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043023	ribosomal large subunit binding