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Lag0013340 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGCCAAGCAATGGCTCAAAAGGGGGCGAACGAAAAGATGGAGATGTGCCATTGCTGTCCCATTGTCTCTTTAGTATTAGTAAGTGGGAACGTGACGTTTTTGTCCATGCCTTTTTCTTTTTTTTTTTCATTTAATTTCACTCTTCTCATTATGATGTTTCCCTCTCATTGCCTAATCCTTCTTCCACTATCCCCATTCATTCTTTCTCTTATTCTAATACAAACAAATCCCTTCATGTTTCTATTTTATACACACCTAAATTTCATTCATATATCACTATATAGAGTATTTATCCTATCCTACCACATGCACTCTAGCGCCAATATCTAATACAGTTTTTCGAGAAAAGAGTTAAGGGATATTTAATTTATTTATATACATCTCACACTCGATCACTCAATCACTCAATCGAGATTTTATAAATAAATATCTAGATATTCGCAGTAAATAAATACTTTTGCTTATGTTTGTAAAAATAGTAATGGAAATAATAAATGACACAACATGCACCTGATTCATACACATATGCAGTCTCTCATTAATTAAGCATGATCTATGATGAATTAGACCCCAACCCACTTTACATCCTTTTCAGTAAACGTCAAATAATTGAATAACATTTTTACTTTACAGTTATTGGAGGAAAGGGAGAGAGAAAAAAGCGTGACGTGGGCTCTCTGGTACGTGCTGCCCGAAAGCAACGGCCAAGATTCGCTCTCAGCAATCAACGTTATTCATCATCCATCCTCATTCTCTCTCTTTCTCTCTCATCTCCCAACTTCCATATATTTCCCACAGCCTACTCCCAGAGTCCACCCCCCCACTCTCCCCTCTTCTTCCTCCCACTTTCACAAATTTCTATTTCCTATTCATCTCTCAGGATGCTGCTGGGGAAGCGCCCTCGCCTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGATCTCGCCGACGTCGAGGTCGAATTAGAAGAACCGTCCGATCAGAACGCCCACGATCCGCCTCACACTACCACCACCATGATCGATTACTCGGGTTTGGTTTCTCCTAGAAATTTAAGAAGTCAGTCGGCACCTACCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGCTCCCGGCCGTGACATCTACATGTACAGGTACTTATAGTTTTAGTTGTAGTTGTAGTACAATATACTTGTACTCGATCGGTTTCTTTCTGAATATATATATTGTAAAAAATGTTTTATATATTATATGGACGTGACGTGTACGTGCAGAGGGGACACGGCGTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGGAGTACGGATCAGGGAAGAAAAAGGATGAACGGCAAGCGGCGGCGTCGACGGCGGGGGGCAGGGGGTCGAGGAAGAACCAGACGGTGGCAGCCACTAAGTATTAG ATGGGAAAGCCAAGCAATGGCTCAAAAGGGGGCGAACGAAAAGATGGAGATGTGCCATTGCTGTCCCATTGTCTCTTTAGTATTATTATTGGAGGAAAGGGAGAGAGAAAAAAGCGTGACGTGGGCTCTCTGGATGCTGCTGGGGAAGCGCCCTCGCCTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGATCTCGCCGACGTCGAGGTCGAATTAGAAGAACCGTCCGATCAGAACGCCCACGATCCGCCTCACACTACCACCACCATGATCGATTACTCGGGTTTGGTTTCTCCTAGAAATTTAAGAAGTCAGTCGGCACCTACCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGCTCCCGGCCGTGACATCTACATGTACAGAGGGGACACGGCGTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGGAGTACGGATCAGGGAAGAAAAAGGATGAACGGCAAGCGGCGGCGTCGACGGCGGGGGGCAGGGGGTCGAGGAAGAACCAGACGGTGGCAGCCACTAAGTATTAG ATGGGAAAGCCAAGCAATGGCTCAAAAGGGGGCGAACGAAAAGATGGAGATGTGCCATTGCTGTCCCATTGTCTCTTTAGTATTATTATTGGAGGAAAGGGAGAGAGAAAAAAGCGTGACGTGGGCTCTCTGGATGCTGCTGGGGAAGCGCCCTCGCCTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGATCTCGCCGACGTCGAGGTCGAATTAGAAGAACCGTCCGATCAGAACGCCCACGATCCGCCTCACACTACCACCACCATGATCGATTACTCGGGTTTGGTTTCTCCTAGAAATTTAAGAAGTCAGTCGGCACCTACCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGCTCCCGGCCGTGACATCTACATGTACAGAGGGGACACGGCGTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGGAGTACGGATCAGGGAAGAAAAAGGATGAACGGCAAGCGGCGGCGTCGACGGCGGGGGGCAGGGGGTCGAGGAAGAACCAGACGGTGGCAGCCACTAAGTATTAG MGKPSNGSKGGERKDGDVPLLSHCLFSIIIGGKGERKKRDVGSLDAAGEAPSPSDQENHQHDRNQGDLADVEVELEEPSDQNAHDPPHTTTTMIDYSGLVSPRNLRSQSAPTDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDERQAAASTAGGRGSRKNQTVAATKY Homology
BLAST of Lag0013340 vs. NCBI nr
Match: XP_038880871.1 (FCS-Like Zinc finger 5 [Benincasa hispida]) HSP 1 Score: 161.0 bits (406), Expect = 1.0e-35 Identity = 98/136 (72.06%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of Lag0013340 vs. NCBI nr
Match: XP_004143480.1 (FCS-Like Zinc finger 5 [Cucumis sativus] >KGN48767.1 hypothetical protein Csa_003848 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 1.6e-33 Identity = 91/136 (66.91%), Postives = 99/136 (72.79%), Query Frame = 0
BLAST of Lag0013340 vs. NCBI nr
Match: XP_008440627.1 (PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo] >KAA0036285.1 protein MARD1-like [Cucumis melo var. makuwa] >TYK12679.1 protein MARD1-like [Cucumis melo var. makuwa]) HSP 1 Score: 151.8 bits (382), Expect = 6.2e-33 Identity = 95/140 (67.86%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Lag0013340 vs. NCBI nr
Match: KAG6594866.1 (FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026831.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.5 bits (371), Expect = 1.2e-31 Identity = 87/127 (68.50%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Lag0013340 vs. NCBI nr
Match: XP_022962947.1 (protein MARD1-like [Cucurbita moschata]) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-31 Identity = 87/128 (67.97%), Postives = 96/128 (75.00%), Query Frame = 0
BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.1e-14 Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13 Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11 Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.0e-11 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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