Lag0013340 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0013340
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionFLZ-type domain-containing protein
Locationchr1: 49487675 .. 49489128 (+)
RNA-Seq ExpressionLag0013340
SyntenyLag0013340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAGCCAAGCAATGGCTCAAAAGGGGGCGAACGAAAAGATGGAGATGTGCCATTGCTGTCCCATTGTCTCTTTAGTATTAGTAAGTGGGAACGTGACGTTTTTGTCCATGCCTTTTTCTTTTTTTTTTTCATTTAATTTCACTCTTCTCATTATGATGTTTCCCTCTCATTGCCTAATCCTTCTTCCACTATCCCCATTCATTCTTTCTCTTATTCTAATACAAACAAATCCCTTCATGTTTCTATTTTATACACACCTAAATTTCATTCATATATCACTATATAGAGTATTTATCCTATCCTACCACATGCACTCTAGCGCCAATATCTAATACAGTTTTTCGAGAAAAGAGTTAAGGGATATTTAATTTATTTATATACATCTCACACTCGATCACTCAATCACTCAATCGAGATTTTATAAATAAATATCTAGATATTCGCAGTAAATAAATACTTTTGCTTATGTTTGTAAAAATAGTAATGGAAATAATAAATGACACAACATGCACCTGATTCATACACATATGCAGTCTCTCATTAATTAAGCATGATCTATGATGAATTAGACCCCAACCCACTTTACATCCTTTTCAGTAAACGTCAAATAATTGAATAACATTTTTACTTTACAGTTATTGGAGGAAAGGGAGAGAGAAAAAAGCGTGACGTGGGCTCTCTGGTACGTGCTGCCCGAAAGCAACGGCCAAGATTCGCTCTCAGCAATCAACGTTATTCATCATCCATCCTCATTCTCTCTCTTTCTCTCTCATCTCCCAACTTCCATATATTTCCCACAGCCTACTCCCAGAGTCCACCCCCCCACTCTCCCCTCTTCTTCCTCCCACTTTCACAAATTTCTATTTCCTATTCATCTCTCAGGATGCTGCTGGGGAAGCGCCCTCGCCTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGATCTCGCCGACGTCGAGGTCGAATTAGAAGAACCGTCCGATCAGAACGCCCACGATCCGCCTCACACTACCACCACCATGATCGATTACTCGGGTTTGGTTTCTCCTAGAAATTTAAGAAGTCAGTCGGCACCTACCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGCTCCCGGCCGTGACATCTACATGTACAGGTACTTATAGTTTTAGTTGTAGTTGTAGTACAATATACTTGTACTCGATCGGTTTCTTTCTGAATATATATATTGTAAAAAATGTTTTATATATTATATGGACGTGACGTGTACGTGCAGAGGGGACACGGCGTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGGAGTACGGATCAGGGAAGAAAAAGGATGAACGGCAAGCGGCGGCGTCGACGGCGGGGGGCAGGGGGTCGAGGAAGAACCAGACGGTGGCAGCCACTAAGTATTAG

mRNA sequence

ATGGGAAAGCCAAGCAATGGCTCAAAAGGGGGCGAACGAAAAGATGGAGATGTGCCATTGCTGTCCCATTGTCTCTTTAGTATTATTATTGGAGGAAAGGGAGAGAGAAAAAAGCGTGACGTGGGCTCTCTGGATGCTGCTGGGGAAGCGCCCTCGCCTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGATCTCGCCGACGTCGAGGTCGAATTAGAAGAACCGTCCGATCAGAACGCCCACGATCCGCCTCACACTACCACCACCATGATCGATTACTCGGGTTTGGTTTCTCCTAGAAATTTAAGAAGTCAGTCGGCACCTACCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGCTCCCGGCCGTGACATCTACATGTACAGAGGGGACACGGCGTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGGAGTACGGATCAGGGAAGAAAAAGGATGAACGGCAAGCGGCGGCGTCGACGGCGGGGGGCAGGGGGTCGAGGAAGAACCAGACGGTGGCAGCCACTAAGTATTAG

Coding sequence (CDS)

ATGGGAAAGCCAAGCAATGGCTCAAAAGGGGGCGAACGAAAAGATGGAGATGTGCCATTGCTGTCCCATTGTCTCTTTAGTATTATTATTGGAGGAAAGGGAGAGAGAAAAAAGCGTGACGTGGGCTCTCTGGATGCTGCTGGGGAAGCGCCCTCGCCTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGATCTCGCCGACGTCGAGGTCGAATTAGAAGAACCGTCCGATCAGAACGCCCACGATCCGCCTCACACTACCACCACCATGATCGATTACTCGGGTTTGGTTTCTCCTAGAAATTTAAGAAGTCAGTCGGCACCTACCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGCTCCCGGCCGTGACATCTACATGTACAGAGGGGACACGGCGTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGAAGACGAGAGAAAAGAGGAGTACGGATCAGGGAAGAAAAAGGATGAACGGCAAGCGGCGGCGTCGACGGCGGGGGGCAGGGGGTCGAGGAAGAACCAGACGGTGGCAGCCACTAAGTATTAG

Protein sequence

MGKPSNGSKGGERKDGDVPLLSHCLFSIIIGGKGERKKRDVGSLDAAGEAPSPSDQENHQHDRNQGDLADVEVELEEPSDQNAHDPPHTTTTMIDYSGLVSPRNLRSQSAPTDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDERQAAASTAGGRGSRKNQTVAATKY
Homology
BLAST of Lag0013340 vs. NCBI nr
Match: XP_038880871.1 (FCS-Like Zinc finger 5 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-35
Identity = 98/136 (72.06%), Postives = 105/136 (77.21%), Query Frame = 0

Query: 65  QGDLADVEVELEEPSDQNAHD------PPHTTTTMIDYSGLVSPRNLRSQSA------PT 124
           +GD+ D  VE EE SDQN HD       PH TTT I+YS LVSPRNLR+Q A      PT
Sbjct: 21  RGDIPD--VEFEELSDQNPHDLHHPMAVPHNTTT-INYSALVSPRNLRNQPARDLAQPPT 80

Query: 125 DHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDERQAA 184
           DHFLRTCGLCKRRLA GRDIYMYRGDTAFCSSECREKQIKEDERK EYG GKKK+ERQAA
Sbjct: 81  DHFLRTCGLCKRRLAAGRDIYMYRGDTAFCSSECREKQIKEDERK-EYG-GKKKEERQAA 140

Query: 185 A---STAGGRGSRKNQ 186
           A   +T GGRGSRK +
Sbjct: 141 AMASTTVGGRGSRKKE 151

BLAST of Lag0013340 vs. NCBI nr
Match: XP_004143480.1 (FCS-Like Zinc finger 5 [Cucumis sativus] >KGN48767.1 hypothetical protein Csa_003848 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.6e-33
Identity = 91/136 (66.91%), Postives = 99/136 (72.79%), Query Frame = 0

Query: 65  QGDLADVEVELEEPSDQNAHDP---------------PHTTTTMIDYSGLVSPRNLRSQS 124
           +GD+ DVE E +  SDQ  ++P               PH TT  I+YS LVSPRNLR QS
Sbjct: 21  RGDIPDVEFEEQPSSDQIINNPGGGYDLHHPIPPVSLPHNTTA-INYSALVSPRNLRDQS 80

Query: 125 APTDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDER 184
            P DHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERK EYG GKKK+ER
Sbjct: 81  PPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERK-EYG-GKKKEER 140

Query: 185 QAAASTAGGRGSRKNQ 186
           QAA    G RGSRK +
Sbjct: 141 QAAG--MGVRGSRKKE 151

BLAST of Lag0013340 vs. NCBI nr
Match: XP_008440627.1 (PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo] >KAA0036285.1 protein MARD1-like [Cucumis melo var. makuwa] >TYK12679.1 protein MARD1-like [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 6.2e-33
Identity = 95/140 (67.86%), Postives = 103/140 (73.57%), Query Frame = 0

Query: 65  QGDLADVEVELEEPSDQN------AHDPPHTT----TTMIDYSGLVSPRNLRSQSA---- 124
           +GD+ DVE E E+PSDQN       H P   +    TT I+YS LVSPRNLR+QSA    
Sbjct: 21  RGDIPDVEFE-EQPSDQNNTGYDLLHHPMPVSVPRNTTAINYSALVSPRNLRNQSARDGL 80

Query: 125 ---PTDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKD 184
              P DHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERK EYG GKKK+
Sbjct: 81  SQPPNDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERK-EYG-GKKKE 140

Query: 185 ERQ--AAASTAGGRGSRKNQ 186
           ERQ  A AST G RGS K +
Sbjct: 141 ERQGGAMASTVGVRGSGKKE 157

BLAST of Lag0013340 vs. NCBI nr
Match: KAG6594866.1 (FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026831.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-31
Identity = 87/127 (68.50%), Postives = 96/127 (75.59%), Query Frame = 0

Query: 65  QGDLADVEVELEEPSDQNAHDPPHT-----TTTMIDYSGLVSPRNLRSQSAPTDHFLRTC 124
           +G LAD   ELEE SDQ AH PP        TTM++YS LVSPRNL  Q    DHFL TC
Sbjct: 21  RGGLAD--EELEESSDQGAHAPPPAVGVPHNTTMLNYSVLVSPRNLGVQLGSNDHFLHTC 80

Query: 125 GLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDERQ-AAASTAGG 184
           GLCKR +APGRDIYMYRGDTAFCSSECREKQIK+DE+K EYG GK+KD RQ AAA+ AGG
Sbjct: 81  GLCKRTIAPGRDIYMYRGDTAFCSSECREKQIKDDEKK-EYG-GKRKDMRQAAAAAAAGG 140

Query: 185 RGSRKNQ 186
           RGSR  +
Sbjct: 141 RGSRSKK 143

BLAST of Lag0013340 vs. NCBI nr
Match: XP_022962947.1 (protein MARD1-like [Cucurbita moschata])

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-31
Identity = 87/128 (67.97%), Postives = 96/128 (75.00%), Query Frame = 0

Query: 65  QGDLADVEVELEEPSDQNAHDPPHT-----TTTMIDYSGLVSPRNLRSQSAPTDHFLRTC 124
           +G LAD   ELEE SDQ AH PP        TTM++YS LVSPRNL  Q    DHFL TC
Sbjct: 21  RGGLAD--EELEETSDQGAHAPPPAVGVPHNTTMLNYSVLVSPRNLGVQLGSNDHFLHTC 80

Query: 125 GLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDERQ--AAASTAG 184
           GLCKR +APGRDIYMYRGDTAFCSSECREKQIK+DE+K EYG GK+KD RQ  AAA+ AG
Sbjct: 81  GLCKRTIAPGRDIYMYRGDTAFCSSECREKQIKDDEKK-EYG-GKRKDMRQAAAAAAAAG 140

Query: 185 GRGSRKNQ 186
           GRGSR  +
Sbjct: 141 GRGSRSKK 144

BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-14
Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 0

Query: 99  LVSPR-NLRSQS---APTDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKED 158
           +V+PR NLR  S   +   HFLR+C LC+R L PGRDIYMYRGD AFCSSECR++Q+ +D
Sbjct: 69  MVTPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQD 128

Query: 159 ERKEEYGSGKKKDERQAAASTAGGRGSRKNQTVAA 190
           ERKE+   GK     +  A TA  R        AA
Sbjct: 129 ERKEK---GKSAAPAKEPAVTAPARAKPGKGRAAA 160

BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0

Query: 68  LADVEVELEEPSDQNAHDPPHTTTTMIDYS------------GLVSPRNL--RSQSAPTD 127
           L++++ +L +PS+Q   D       + ++              +VSPR    R  S  ++
Sbjct: 17  LSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAMVSPRGTQRRHSSDYSE 76

Query: 128 HFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYGSGKKKDERQAAA 182
            FLR+C LCKR L  GRDIYMYRGD AFCS ECR++QI  DERKE+     +     A  
Sbjct: 77  DFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKKKGSVRSTIVVATG 136

BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 0

Query: 58  NHQHDRNQGDLADVEVELEEPSDQNAHDPPHTTTTMID-----YSGLVSP-------RNL 117
           N    + Q   +   + +E   DQ A      + T++D         +SP       R  
Sbjct: 5   NRPRPQMQRTASITRITIEVDGDQTAGQDSDVSMTVVDGGENYAQRFLSPVNHQRNERKY 64

Query: 118 RSQSAPTDHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERK 158
             +S+P+  FL  CG CKR LAPGRDIYMY+GD AFCS ECRE+Q++ DE K
Sbjct: 65  GGRSSPSS-FLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDEGK 115

BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 113 DHFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEEYG 162
           D FL+TC LC R L   RDIYMYRG+ AFCS ECREKQIK DE+K + G
Sbjct: 55  DDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKTG 103

BLAST of Lag0013340 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-11
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0

Query: 114 HFLRTCGLCKRRLAPGRDIYMYRGDTAFCSSECREKQIKEDERKEE 160
           HFL +C LCK+ L   RDIYMYRGDT FCS ECR++QI+ DE KE+
Sbjct: 96  HFLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKEK 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880871.11.0e-3572.06FCS-Like Zinc finger 5 [Benincasa hispida][more]
XP_004143480.11.6e-3366.91FCS-Like Zinc finger 5 [Cucumis sativus] >KGN48767.1 hypothetical protein Csa_00... [more]
XP_008440627.16.2e-3367.86PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo] >KAA0036285.1 pro... [more]
KAG6594866.11.2e-3168.50FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026... [more]
XP_022962947.11.5e-3167.97protein MARD1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9SGZ85.1e-1451.58FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1[more]
Q8VY802.5e-1339.06FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1[more]
F4JW681.1e-1139.29FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1[more]
Q9LV751.8e-1167.35Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702... [more]
Q9FGQ99.0e-1165.22FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007650Zf-FLZ domainPFAMPF04570zf-FLZcoord: 107..157
e-value: 2.4E-26
score: 90.9
IPR007650Zf-FLZ domainPROSITEPS51795ZF_FLZcoord: 114..158
score: 26.280645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..95
NoneNo IPR availablePANTHERPTHR33059:SF76PROTEIN INCREASED RESISTANCE TO MYZUS PERSICAE 1coord: 68..172
NoneNo IPR availablePANTHERPTHR33059FCS-LIKE ZINC FINGER 5coord: 68..172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0013340.1Lag0013340.1mRNA