Lag0013120 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0013120
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr1: 47628748 .. 47630970 (+)
RNA-Seq ExpressionLag0013120
SyntenyLag0013120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGTTCGTATATATCGACCAGCCCCCCTGCTTTGCTCTTCAAAGACAAGTGTGGAATGGGATGATCGGAGCGCCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAACGGGAAAAAACTGAGACTCTCGGAAACGGCGTTGAGGATATATCGATTGAAGAACGGTGTTCACTCGCCGCTAATGTACGTGCGTTTCACACGTGTGGTCAAGTGCATTGCCGTCATATTATTGGTTGGGTAAGGTGACGTGTACCGGAAAAACGACAACTCGCTCTAAGTTTGGTTTTGTGGGGGGGGGGGGGGGGGGGGGGTGTTGTATTCTGATTGGTCTTTTTTGTTTTCTGTTTCGTTGGCAAAATATGGCCAACTTCAATCTTTTTATTTTAAAATTTCTTAATCTTTTTTTTTATAGAAAATTTCTGGTAAATTGTCAAAATTAACCCAAATAAGTTTTGGGTTTTCAAAATTGACCTAGTTTCTAAAAACTTGTTTTTTTAACCTATTTTATATAAAGTTAACTACTTTTGGTGGGACCCATAATGTAAAAAGTCATTCCTATCCTCCCTCAATTTTCATTAATGATAAGAATTAAATCCAACCAACTCAACTAACCAATTTCAAACCTAACAAACCATTTGACCCACAAAGTATTTTAAAAGAATAAAATCAAACACGTGAAATCGAGCACACGGATAGACTCACTCCAAAATTTTTATATTGTCAATGTTTTTTTGAAGTACATTTGAGGATGATTTTACATGTTTTGGATAATAAGGAGTTTGTATAAAATATTTTTATGAAAATCTGGAAAAAAATATGAATTTCAACCGGGAAATTATGAATTTCGACCGGGAAATTATGAATCCCGATCGGGAAATTATGAATCCCGACCGGGATTTCTTGGTCAGACGACCGAAATTTCTTGGTCGGTTTCCCGACCAAGAAATTTTCCAGGAGGTCTTTTTTTTTTTTTATCTCATGTCTATTTCTTTCCTCTTTTTGGGTTTATTCTTTCATTTCTTCAAGAAATTTTGAAGGCACATGTTTTTTTAAAATTATATATATATTTTTAATCAAACTCACATTTCTTTTTATTCATAATTCATTAATGTTGGGCAAAAAAAAAAAAAAAGAAGAAAAAAAAAGGAAAAAAATTATGTATATGAAAAAAGAAATAAAGAAAAATTTAACCAAGAATTTTTTTGGACGAACTAACCCAGAAATCAATCACGAAATTTTAAAAATACCTATTTTTTTTAAATATATTGGATCGGAGGAAGAAAAATAATAATAATAACAATATTGGACACAAATTTTTAACCAAGAAATTCCGATCAAAATTTAGTTAAAAAATTTTGAAGACAATTTTTTTTTTGTAAATTTTTTATGACCAATTTTATCATTTTTTTTTAAATTTTATTAATATTGGACACAAAAACAAACCGAAGTGAGGAAGAAAGAATAAAACTAATAATAATTATTATTGTTGTTATTATTATTATAAAATTAAAATTAAAATGATTAAAAAAAAAAACTGGATTAAGCAGAAGAACATAGCAGAAAAAAAATATATGAAAATGAGGTTTGAAAGGAGAGGGGAGCAAGAGCTACATGCTGGATGGTTTTTTGTTTTACCTTTTATATTCAAGGGTATGTTGGTAATTGCACAAGGGTAGATGACATCAACAAGGTTAAAAAAACAAGTTTTAAAAAAATAGGTTAATTTTGAAAACCCAAAAACTATTTGGGTTAATTTTGACAATTTCCCAAAATTTCTCAATCCAGTTCATTTATATATTTTCTTTAGATACTTCTTCTTTTCTTTTCTTTTTTTTTTTGAAATAATATTTTCTTTAGATACCTATTGGAAAGTGAATTCAGATGCAGCCTGCGATCCATCTTTTCCGTCATAGGGCTTGGGGTGATATACAAAAACTCTAAGGGGGTGTTTGGGGCACTGAATAGGTTATAATAACTCCCCTTATTATAACATATTCAATGTTTGGGACACCAACAAAAATAATTTGTGAGGTGGTTAACCTCCGATTATTTTATCCATTTTCTACAGTAACCATTATTCAACCCACTGTAGTAACTATCTCCTCACTTCTTCCATGCGACTCCTTGACTTTTCCGACGATCGCCGGCCGCCGTCAGTCGGCGAAGTTTCCGACTAATTTTCCGACGACCGCCGACGACTTTTCCGGCGGTCGCCGATGA

mRNA sequence

ATGCTGTTCGTATATATCGACCAGCCCCCCTGCTTTGCTCTTCAAAGACAAGTGTGGAATGGGATGATCGGAGCGCCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAACGGGAAAAAACTGAGACTCTCGGAAACGGCGTTGAGGATATATCGATTGAAGAACGGTGTTCACTCGCCGCTAATGTACTAACCATTATTCAACCCACTGTAGTAACTATCTCCTCACTTCTTCCATGCGACTCCTTGACTTTTCCGACGATCGCCGGCCGCCGTCAGTCGGCGAAGTTTCCGACTAATTTTCCGACGACCGCCGACGACTTTTCCGGCGGTCGCCGATGA

Coding sequence (CDS)

ATGCTGTTCGTATATATCGACCAGCCCCCCTGCTTTGCTCTTCAAAGACAAGTGTGGAATGGGATGATCGGAGCGCCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAACGGGAAAAAACTGAGACTCTCGGAAACGGCGTTGAGGATATATCGATTGAAGAACGGTGTTCACTCGCCGCTAATGTACTAACCATTATTCAACCCACTGTAGTAACTATCTCCTCACTTCTTCCATGCGACTCCTTGACTTTTCCGACGATCGCCGGCCGCCGTCAGTCGGCGAAGTTTCCGACTAATTTTCCGACGACCGCCGACGACTTTTCCGGCGGTCGCCGATGA

Protein sequence

MLFVYIDQPPCFALQRQVWNGMIGAPIVDLYRAGNGKREKTETLGNGVEDISIEERCSLAANVLTIIQPTVVTISSLLPCDSLTFPTIAGRRQSAKFPTNFPTTADDFSGGRR
Homology
[Close]
BLAST of Lag0013120 vs. NCBI nr
Match: KAG6594998.1 (hypothetical protein SDJN03_11551, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-12
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0 

Query: 22 MIGAPIVDLYRAGNGKREKTETLGNGVEDISIEERCSLAANV 64
          MIGA IVDLYRAGNGKRE+TETLGNGVEDISIEERCSLAANV
Sbjct: 1  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANV 42

[Close]
BLAST of Lag0013120 vs. NCBI nr
Match: KAG7026954.1 (hypothetical protein SDJN02_10962, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-12
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0 

Query: 22 MIGAPIVDLYRAGNGKREKTETLGNGVEDISIEERCSLAANV 64
          MIGA IVDLYRAGNGKRE+TETLGNGVEDISIEERCSLAANV
Sbjct: 1  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANV 42

The following BLAST results are available for this feature:
BLAST of Lag0013120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594998.12.7e-1295.24hypothetical protein SDJN03_11551, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026954.12.7e-1295.24hypothetical protein SDJN02_10962, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Lag0013120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0013120.1Lag0013120.1mRNA