Lag0013116 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTGCTTCAGTCAGTTTGGTTGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATGCTCCAAGTAAGATAAATGCTTTACCATTAATATCAAAACTATTTGCAATGAATATACAACCAAGAGACTAACTGGTTTATTGTTTTTCCCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTGGAAGGTGTTTGTGATTCAAAATGTGGGGTAAGATGTTTGAATGCAGGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAATAAGTCGGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA ATGGAATCTGCTTCAGTCAGTTTGGTTGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAATAAGTCGGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA ATGGAATCTGCTTCAGTCAGTTTGGTTGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAATAAGTCGGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA MESASVSLVVVSLILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP Homology
BLAST of Lag0013116 vs. NCBI nr
Match: KAG6595002.1 (Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 153.3 bits (386), Expect = 8.9e-34 Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0
BLAST of Lag0013116 vs. NCBI nr
Match: KAE8647513.1 (hypothetical protein Csa_002853 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33 Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Lag0013116 vs. NCBI nr
Match: TYK12845.1 (peamaclein-like [Cucumis melo var. makuwa]) HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of Lag0013116 vs. NCBI nr
Match: XP_038880848.1 (peamaclein-like [Benincasa hispida]) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 74/94 (78.72%), Postives = 78/94 (82.98%), Query Frame = 0
BLAST of Lag0013116 vs. NCBI nr
Match: XP_031742787.1 (peamaclein-like isoform X1 [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 2.7e-30 Identity = 71/95 (74.74%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of Lag0013116 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.4e-20 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of Lag0013116 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-18 Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 0
BLAST of Lag0013116 vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.2e-17 Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
BLAST of Lag0013116 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.5e-17 Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Lag0013116 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.5e-17 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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