Lag0013028 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0013028
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GLABRA2 expression modulator-like
Location	chr1: 46757976 .. 46759736 (+)
RNA-Seq Expression	Lag0013028
Synteny	Lag0013028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGGCTTTGGGCGGGGCTGGTTTGGGTGCAGTAGTAGGAGAGCTGCTTACAGCCATCGTGAATTTGATCGAAAAGGCCATTCATTTCAAACCTGTTCTTGAAAATACGAAGCGGCAGTTGGAGTGTTTAAGTTCTGTGATCCAGCAGCTCGATAAGCTTAACAGAGACTTCCTCGATTGCCCAGAAAACATCAAGAACTTGAGGGAAGTAATAAATAAAGGGAAGCAACTGATTCTCAAGTGCGACGCTGTCAAAGAGAGTAGATTCTTCAAGTATCCGAAGACCCCATTTTACACCAAAAAGCTTCGCAATTTGGATGCTGAGCTTGAAACGGCCTCAAAACGTTTGTCATTGCAATTGAATGTACAACAGATTAAAATACTACAAGCTATGGGGACGACTAATTACGCAAATCTTGCCTCTCCCGAAACCAAGCCGCCCTTACAGTTTGACCACCACAAGCACCTCAAAGGTACACAAATTAAATTCATAATTATCTTCTCTCTTTCTATTGCCTTTTATATATTCACTCTCTCAACTCTCAACATATATATTTCTGCTGTGCTCATGAGCTAAAATGCATGCCCAACGAGTTGTTTGAGGGGGGAATTTTTTTTTTTTAGTTTGTCTTTTTATTTTAATTCGAATCTTTGACCTTTTGGTCGAGAGTACATTTTAATTAACATTGACCTACATTGGAAATGGTTGCAGAACACATAAAGGAGAAGGACGACTCAAACGAAGGTAGGTATAAGAAAACTTTCTACCCAACTTTTTATTCAAAGCTATATAAAATACTCCACTAAACCTCCCTTCTGTTGTTACTCCGATAGATGTCTTAAAATATGTGGTTATAAACATATAGATTATTGAAAATTTTAAACGGGCTTTTCTATAAACACTTAATTAAAAGGCATATAGCAAACATTAATTAATATCATAGTGTTAAGTGTTAAATAGGATATATGGAGAAATTAATGGCGTGTTTACATACATTGTAGAATCAGAGAAAACAAGTCGAATGATAAAGGAATTGGGAGAAGATCGATATGAGAAGATTTTTCATCAAACTTTTGGTACAGTGGCTGAGGAAAAACTTAAGAATTCATTTGCATGTTATTTGTCCACGTCTGCTGGTCCTGTTATGGGTGTATTATATGCATCTACGGCAAAGCTTGCATACTGCAGCGACAATCCTCTTTCGTACAAGTCTGAGGGGAAAACGGAATGGAGCTATTACAAGGTATTTTTAGCTAAGCATTTGCAAATGCAAACCAATAATATAATTCTTCATATCTTTGCACAAGATTTTTAGCAAGCCTAAGTGAAGACCATGGGTAACTGGGAAATTAGGGAAAATAACTGAAACTCTCTCCTGTTTGTGTTTCATTGTTTGTTAGGAATAATATATATATTTACTTTCTAGTAGATGAGATTTCAGGTCTACATCTTCAAAATGGGGTTCTGGAAAATCCAAGTTGGGTCTCACCAGATTTTGTTTAGATATCATGTTTGTGGTTTTGAACATATATATTTCGTCTATGTTGAAACCAGGTAGTTATCCCATTACAGAAACTAAAGGCAGTTAATCCATCCACCTCAAGTGTACTGAATAATCCTGCTGAAAAGTACATACAGATAATCTCTTGTGATAACTATGAATTTTGGTTCATGGGCTTCTTCAATAACTACAATGCTGCTGTAGAATGCCTACAAGATTTCCCCGAGTTAGGAGCAATAATGCGGTCGGTGTAA

mRNA sequence

ATGGCGGAGGCTTTGGGCGGGGCTGGTTTGGGTGCAGTAGTAGGAGAGCTGCTTACAGCCATCGTGAATTTGATCGAAAAGGCCATTCATTTCAAACCTGTTCTTGAAAATACGAAGCGGCAGTTGGAGTGTTTAAGTTCTGTGATCCAGCAGCTCGATAAGCTTAACAGAGACTTCCTCGATTGCCCAGAAAACATCAAGAACTTGAGGGAAGTAATAAATAAAGGGAAGCAACTGATTCTCAAGTGCGACGCTGTCAAAGAGAGTAGATTCTTCAAGTATCCGAAGACCCCATTTTACACCAAAAAGCTTCGCAATTTGGATGCTGAGCTTGAAACGGCCTCAAAACGTTTGTCATTGCAATTGAATGTACAACAGATTAAAATACTACAAGCTATGGGGACGACTAATTACGCAAATCTTGCCTCTCCCGAAACCAAGCCGCCCTTACAGTTTGACCACCACAAGCACCTCAAAGAACACATAAAGGAGAAGGACGACTCAAACGAAGAATCAGAGAAAACAAGTCGAATGATAAAGGAATTGGGAGAAGATCGATATGAGAAGATTTTTCATCAAACTTTTGGTACAGTGGCTGAGGAAAAACTTAAGAATTCATTTGCATGTTATTTGTCCACGTCTGCTGGTCCTGTTATGGGTGTATTATATGCATCTACGGCAAAGCTTGCATACTGCAGCGACAATCCTCTTTCGTACAAGTCTGAGGGGAAAACGGAATGGAGCTATTACAAGGTAGTTATCCCATTACAGAAACTAAAGGCAGTTAATCCATCCACCTCAAGTGTACTGAATAATCCTGCTGAAAAGTACATACAGATAATCTCTTGTGATAACTATGAATTTTGGTTCATGGGCTTCTTCAATAACTACAATGCTGCTGTAGAATGCCTACAAGATTTCCCCGAGTTAGGAGCAATAATGCGGTCGGTGTAA

Coding sequence (CDS)

ATGGCGGAGGCTTTGGGCGGGGCTGGTTTGGGTGCAGTAGTAGGAGAGCTGCTTACAGCCATCGTGAATTTGATCGAAAAGGCCATTCATTTCAAACCTGTTCTTGAAAATACGAAGCGGCAGTTGGAGTGTTTAAGTTCTGTGATCCAGCAGCTCGATAAGCTTAACAGAGACTTCCTCGATTGCCCAGAAAACATCAAGAACTTGAGGGAAGTAATAAATAAAGGGAAGCAACTGATTCTCAAGTGCGACGCTGTCAAAGAGAGTAGATTCTTCAAGTATCCGAAGACCCCATTTTACACCAAAAAGCTTCGCAATTTGGATGCTGAGCTTGAAACGGCCTCAAAACGTTTGTCATTGCAATTGAATGTACAACAGATTAAAATACTACAAGCTATGGGGACGACTAATTACGCAAATCTTGCCTCTCCCGAAACCAAGCCGCCCTTACAGTTTGACCACCACAAGCACCTCAAAGAACACATAAAGGAGAAGGACGACTCAAACGAAGAATCAGAGAAAACAAGTCGAATGATAAAGGAATTGGGAGAAGATCGATATGAGAAGATTTTTCATCAAACTTTTGGTACAGTGGCTGAGGAAAAACTTAAGAATTCATTTGCATGTTATTTGTCCACGTCTGCTGGTCCTGTTATGGGTGTATTATATGCATCTACGGCAAAGCTTGCATACTGCAGCGACAATCCTCTTTCGTACAAGTCTGAGGGGAAAACGGAATGGAGCTATTACAAGGTAGTTATCCCATTACAGAAACTAAAGGCAGTTAATCCATCCACCTCAAGTGTACTGAATAATCCTGCTGAAAAGTACATACAGATAATCTCTTGTGATAACTATGAATTTTGGTTCATGGGCTTCTTCAATAACTACAATGCTGCTGTAGAATGCCTACAAGATTTCCCCGAGTTAGGAGCAATAATGCGGTCGGTGTAA

Protein sequence

MAEALGGAGLGAVVGELLTAIVNLIEKAIHFKPVLENTKRQLECLSSVIQQLDKLNRDFLDCPENIKNLREVINKGKQLILKCDAVKESRFFKYPKTPFYTKKLRNLDAELETASKRLSLQLNVQQIKILQAMGTTNYANLASPETKPPLQFDHHKHLKEHIKEKDDSNEESEKTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSYKSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNAAVECLQDFPELGAIMRSV

Homology

[Close]

BLAST of Lag0013028 vs. NCBI nr
Match: XP_022978793.1 (GLABRA2 expression modulator-like [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-52
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIFHQTF TVAEEKL+NSFACYLSTSAGPVMGVLY STAKLA+CSDNPLSY
Sbjct: 158 KVLAEGGYEKIFHQTFDTVAEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAFCSDNPLSY 217

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K +G+TEWSYYKVVIPLQ+LKAVNPSTS +  NPAEKYIQIIS DN+EFWFMGF  NYN 
Sbjct: 218 KFDGRTEWSYYKVVIPLQQLKAVNPSTSGM--NPAEKYIQIISGDNHEFWFMGFL-NYNG 277

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL AI
Sbjct: 278 AVECLLEFPELRAI 288

[Close]

BLAST of Lag0013028 vs. NCBI nr
Match: KAG7034221.1 (GLABRA2 expression modulator [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-52
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIFHQTF TVAEEKL+NSFACYLSTSAGPVMGVLY STAKLA+CSDNPLSY
Sbjct: 158 KVLAEGGYEKIFHQTFDTVAEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAFCSDNPLSY 217

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K +G+TEWSYYKVVIPLQ+LKAVNPSTS +  NPAEKYIQIIS DN+EFWFMGF  NYN 
Sbjct: 218 KFDGRTEWSYYKVVIPLQQLKAVNPSTSGM--NPAEKYIQIISGDNHEFWFMGFL-NYNG 277

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL AI
Sbjct: 278 AVECLLEFPELRAI 288

[Close]

BLAST of Lag0013028 vs. NCBI nr
Match: XP_022950807.1 (GLABRA2 expression modulator-like [Cucurbita moschata])

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-52
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIFHQTF TVAEEKL+NSFACYLSTSAGPVMGVLY STAKLA+CSDNPLSY
Sbjct: 157 KVLAEGGYEKIFHQTFDTVAEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAFCSDNPLSY 216

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K +G+TEWSYYKVVIPLQ+LKAVNPSTS +  NPAEKYIQIIS DN+EFWFMGF  NYN 
Sbjct: 217 KFDGRTEWSYYKVVIPLQQLKAVNPSTSGM--NPAEKYIQIISGDNHEFWFMGFL-NYNG 276

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL AI
Sbjct: 277 AVECLLEFPELRAI 287

[Close]

BLAST of Lag0013028 vs. NCBI nr
Match: KAG6604055.1 (GLABRA2 expression modulator, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-52
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIFHQTF TVAEEKL+NSFACYLSTSAGPVMGVLY STAKLA+CSDNPLSY
Sbjct: 158 KVLAEGGYEKIFHQTFDTVAEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAFCSDNPLSY 217

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K +G+TEWSYYKVVIPLQ+LKAVNPSTS +  NPAEKY+QIIS DN+EFWFMGF  NYN 
Sbjct: 218 KFDGRTEWSYYKVVIPLQQLKAVNPSTSGM--NPAEKYLQIISGDNHEFWFMGFL-NYNG 277

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL AI
Sbjct: 278 AVECLLEFPELRAI 288

[Close]

BLAST of Lag0013028 vs. NCBI nr
Match: KAG7034359.1 (putative GEM-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-52
Identity = 142/310 (45.81%), Postives = 183/310 (59.03%), Query Frame = 0


Query: 1   MAEAL-GGAGLGAVVGELLTAIVNLIEKAIHFKPVLENTKRQLECLSSVIQQLDKLNRDF 60
           MAE L  GA LGA+ GELL  I++L EK+IHFKPV+E  + QLE L  VIQQLD  +  F
Sbjct: 1   MAEGLVSGAVLGALFGELLKGILDLAEKSIHFKPVVEEMRGQLEFLRLVIQQLDDEHSGF 60

Query: 61  LDCPENIKNLREVINKGKQLILKCDAVKESRFFKYPKTPFYTKKLRNLDAELETASKRLS 120
           LD  EN ++LR VI KGK+LI KC+ V +S    Y K PFYTKKLR LDAE   AS+ L 
Sbjct: 61  LDSAENTRSLRGVIEKGKKLIGKCEGVDQS-ILNYHKAPFYTKKLRQLDAEFGRASQNLL 120

Query: 121 LQLNVQQIKILQAMGTTNYANLASPETKPPLQFDHHKHLKEHIKEKDDSNEESEKTSRMI 180
           LQ+NVQQ++ +   G          +T P    +    + EHIK   D+  +  +    I
Sbjct: 121 LQMNVQQLRRISMNG----------KTGPNFGDEMLGWVVEHIK---DNTNQGGRVEEAI 180

Query: 181 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 240
           + LG+ R+EKIFH+TF TVA EKL+N F C L T  GP+ GVL+ ST KLA+C++    +
Sbjct: 181 ERLGDGRFEKIFHRTFETVANEKLQNWFRCDLETEVGPLRGVLFVSTVKLAFCTNIHTPH 240

Query: 241 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPA-EKYIQIISCDNYEFWFMGFFNNYN 300
            +       Y KV+IP Q LK V         NP  ++YI  IS DN +F F+  F NY 
Sbjct: 241 PN------LYLKVIIPFQLLKGVG-------RNPCDQQYIHFISVDNQKFQFIN-FRNYE 282

Query: 301 AAVECLQDFP 309
            A +C Q  P
Sbjct: 301 DANKCAQQIP 282

[Close]

BLAST of Lag0013028 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-46
Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           + ++  K   E  YEKIF QTF T  EE+L NSFACYLSTSAGPVMGVLY S+AKLAYCS
Sbjct: 160 RIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCS 219

Query: 234 DNPLSYKSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGF 293
           DNPLSYK+  +TEWSYYKVVIPL +LKAVNPS S V  NPAEKYIQ+IS DN+EFWFMGF
Sbjct: 220 DNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIV--NPAEKYIQVISVDNHEFWFMGF 279

Query: 294 FNNYNAAVECLQDFPELGAIMRSV 318
             NY+ AV  LQD  + GA +RSV
Sbjct: 280 L-NYDGAVTSLQDSLQAGA-LRSV 299

[Close]

BLAST of Lag0013028 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-37
Identity = 80/127 (62.99%), Postives = 98/127 (77.17%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEK+F QTF  + +EKL  ++ACYLSTSAGPV+GV+Y ST KLA+ SDNPLSY
Sbjct: 129 KILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSY 188

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K   +T WSYYKVV+P  +LKAVNPSTS V  N ++KYIQ+IS DN+EFWFMGF   Y +
Sbjct: 189 KEGEQTLWSYYKVVLPANQLKAVNPSTSRV--NTSDKYIQVISIDNHEFWFMGFV-TYES 248

Query: 300 AVECLQD 307
           AV+ LQ+
Sbjct: 249 AVKSLQE 252

[Close]

BLAST of Lag0013028 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.7e-36
Identity = 86/139 (61.87%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           + ++  K L E  YEKIF QTF TV EE+L+NSFACYLSTSAGPVMGVLY STAKLAYCS
Sbjct: 113 RIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCS 172

Query: 234 DNPLSYKSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGF 293
           D  L              VVIPL +LK+VNPS S+V  NPAEKYIQ+IS D++EFWFMGF
Sbjct: 173 DTSL--------------VVIPLHQLKSVNPSISTV--NPAEKYIQVISVDDHEFWFMGF 232

Query: 294 FNNYNAAVECLQDFPELGA 313
             NY  AV  LQD  + GA
Sbjct: 233 L-NYEGAVTSLQDTLQAGA 234

[Close]

BLAST of Lag0013028 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.3e-26
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           K +   K + +  +E +F Q FGT   E LK +FACYLST+ GPV G +Y S A++A+CS
Sbjct: 128 KVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCS 187

Query: 234 DNPLSYKS-EGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMG 293
           D PL + +  G+  WSYY+VV+PL  +  VNP    V   P EKYIQ+ + D ++FWFMG
Sbjct: 188 DRPLYFTAPSGQESWSYYRVVVPLANVATVNPVV--VKETPPEKYIQLTTVDGHDFWFMG 247

Query: 294 FFN 296
           F N
Sbjct: 248 FVN 248

[Close]

BLAST of Lag0013028 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-21
Identity = 58/150 (38.67%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 158 LKEHIK-EKDDSNEESEKTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAG 217
           LK+H+K     S+    + S+  K + E   E++F + FG +A EKL +SF CY+ST++G
Sbjct: 74  LKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSG 133

Query: 218 PVMGVLYASTAKLAYCSDNPLSYKSE--GKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPA 277
           PV GV+Y S  ++A+CSD  +   S   G    +YYKVV+  +K+ +++ ST+ +   P+
Sbjct: 134 PVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVL--KPS 193

Query: 278 EKYIQIISCDNYEFWFMGFFNNYNAAVECL 305
           E+Y+ +++ D +EFWFMGF  +Y  A  CL
Sbjct: 194 ERYVHMVTRDGFEFWFMGFV-SYIDAFNCL 220

[Close]

BLAST of Lag0013028 vs. ExPASy TrEMBL
Match: A0A6J1IUA8 (GLABRA2 expression modulator-like OS=Cucurbita maxima OX=3661 GN=LOC111478651 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.6e-53
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIFHQTF TVAEEKL+NSFACYLSTSAGPVMGVLY STAKLA+CSDNPLSY
Sbjct: 158 KVLAEGGYEKIFHQTFDTVAEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAFCSDNPLSY 217

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K +G+TEWSYYKVVIPLQ+LKAVNPSTS +  NPAEKYIQIIS DN+EFWFMGF  NYN 
Sbjct: 218 KFDGRTEWSYYKVVIPLQQLKAVNPSTSGM--NPAEKYIQIISGDNHEFWFMGFL-NYNG 277

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL AI
Sbjct: 278 AVECLLEFPELRAI 288

[Close]

BLAST of Lag0013028 vs. ExPASy TrEMBL
Match: A0A6J1GFW5 (GLABRA2 expression modulator-like OS=Cucurbita moschata OX=3662 GN=LOC111453803 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.6e-53
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIFHQTF TVAEEKL+NSFACYLSTSAGPVMGVLY STAKLA+CSDNPLSY
Sbjct: 157 KVLAEGGYEKIFHQTFDTVAEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAFCSDNPLSY 216

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K +G+TEWSYYKVVIPLQ+LKAVNPSTS +  NPAEKYIQIIS DN+EFWFMGF  NYN 
Sbjct: 217 KFDGRTEWSYYKVVIPLQQLKAVNPSTSGM--NPAEKYIQIISGDNHEFWFMGFL-NYNG 276

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL AI
Sbjct: 277 AVECLLEFPELRAI 287

[Close]

BLAST of Lag0013028 vs. ExPASy TrEMBL
Match: A0A5D3CMF8 (Putative GEM-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003130 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.2e-52
Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIF QTF TV EEKL+NSFACYLSTSAGPVMGVLY STAKLAYCSDNPLSY
Sbjct: 157 KVLAEGGYEKIFQQTFDTVPEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDNPLSY 216

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           KS+GKTEWSYYKVVIPLQ+LKAVNPS+S +  NP+EKYIQ+IS DN+EFWFMGF  NYN 
Sbjct: 217 KSDGKTEWSYYKVVIPLQQLKAVNPSSSGM--NPSEKYIQVISGDNHEFWFMGFL-NYNG 276

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL A+
Sbjct: 277 AVECLLEFPELQAV 287

[Close]

BLAST of Lag0013028 vs. ExPASy TrEMBL
Match: A0A1S3B212 (putative GEM-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103484944 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.2e-52
Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIF QTF TV EEKL+NSFACYLSTSAGPVMGVLY STAKLAYCSDNPLSY
Sbjct: 157 KVLAEGGYEKIFQQTFDTVPEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDNPLSY 216

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           KS+GKTEWSYYKVVIPLQ+LKAVNPS+S +  NP+EKYIQ+IS DN+EFWFMGF  NYN 
Sbjct: 217 KSDGKTEWSYYKVVIPLQQLKAVNPSSSGM--NPSEKYIQVISGDNHEFWFMGFL-NYNG 276

Query: 300 AVECLQDFPELGAI 314
           AVECL +FPEL A+
Sbjct: 277 AVECLLEFPELQAV 287

[Close]

BLAST of Lag0013028 vs. ExPASy TrEMBL
Match: A0A6J1BUM3 (GLABRA2 expression modulator OS=Momordica charantia OX=3673 GN=LOC111005860 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.1e-52
Identity = 108/134 (80.60%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEKIF QTF TV EEKL+NSFACYLSTSAGPVMGVLY STAKLAYCSDNPLSY
Sbjct: 154 KVLAEGGYEKIFQQTFDTVPEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDNPLSY 213

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           KSEG TEWSYYKVVIPLQ+LKAVNPS+S +  NPAEKYIQIIS DN+EFWFMGF  NY  
Sbjct: 214 KSEGNTEWSYYKVVIPLQQLKAVNPSSSGM--NPAEKYIQIISVDNHEFWFMGFL-NYTG 273

Query: 300 AVECLQDFPELGAI 314
           AVECLQ+FPE+  I
Sbjct: 274 AVECLQEFPEVRGI 284

[Close]

BLAST of Lag0013028 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein )

HSP 1 Score: 188.3 bits (477), Expect = 9.2e-48
Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           + ++  K   E  YEKIF QTF T  EE+L NSFACYLSTSAGPVMGVLY S+AKLAYCS
Sbjct: 160 RIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCS 219

Query: 234 DNPLSYKSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGF 293
           DNPLSYK+  +TEWSYYKVVIPL +LKAVNPS S V  NPAEKYIQ+IS DN+EFWFMGF
Sbjct: 220 DNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIV--NPAEKYIQVISVDNHEFWFMGF 279

Query: 294 FNNYNAAVECLQDFPELGAIMRSV 318
             NY+ AV  LQD  + GA +RSV
Sbjct: 280 L-NYDGAVTSLQDSLQAGA-LRSV 299

[Close]

BLAST of Lag0013028 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 )

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-38
Identity = 80/127 (62.99%), Postives = 98/127 (77.17%), Query Frame = 0


Query: 180 KELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCSDNPLSY 239
           K L E  YEK+F QTF  + +EKL  ++ACYLSTSAGPV+GV+Y ST KLA+ SDNPLSY
Sbjct: 129 KILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSY 188

Query: 240 KSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGFFNNYNA 299
           K   +T WSYYKVV+P  +LKAVNPSTS V  N ++KYIQ+IS DN+EFWFMGF   Y +
Sbjct: 189 KEGEQTLWSYYKVVLPANQLKAVNPSTSRV--NTSDKYIQVISIDNHEFWFMGFV-TYES 248

Query: 300 AVECLQD 307
           AV+ LQ+
Sbjct: 249 AVKSLQE 252

[Close]

BLAST of Lag0013028 vs. TAIR 10
Match: AT4G40100.1 (GRAM domain family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-29
Identity = 75/139 (53.96%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           + ++  K L E  YEKIF QTF TV EE+L+NSFACYLSTSAGPVMGVLY          
Sbjct: 113 RIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLY---------- 172

Query: 234 DNPLSYKSEGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMGF 293
                             VVIPL +LK+VNPS S+V  NPAEKYIQ+IS D++EFWFMGF
Sbjct: 173 ------------------VVIPLHQLKSVNPSISTV--NPAEKYIQVISVDDHEFWFMGF 220

Query: 294 FNNYNAAVECLQDFPELGA 313
             NY  AV  LQD  + GA
Sbjct: 233 L-NYEGAVTSLQDTLQAGA 220

[Close]

BLAST of Lag0013028 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein )

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-27
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           K +   K + +  +E +F Q FGT   E LK +FACYLST+ GPV G +Y S A++A+CS
Sbjct: 128 KVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCS 187

Query: 234 DNPLSYKS-EGKTEWSYYKVVIPLQKLKAVNPSTSSVLNNPAEKYIQIISCDNYEFWFMG 293
           D PL + +  G+  WSYY+VV+PL  +  VNP    V   P EKYIQ+ + D ++FWFMG
Sbjct: 188 DRPLYFTAPSGQESWSYYRVVVPLANVATVNPVV--VKETPPEKYIQLTTVDGHDFWFMG 247

Query: 294 FFN 296
           F N
Sbjct: 248 FVN 248

[Close]

BLAST of Lag0013028 vs. TAIR 10
Match: AT2G22475.2 (GRAM domain family protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-26
Identity = 57/82 (69.51%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 174 KTSRMIKELGEDRYEKIFHQTFGTVAEEKLKNSFACYLSTSAGPVMGVLYASTAKLAYCS 233
           + ++  K   E  YEKIF QTF T  EE+L NSFACYLSTSAGPVMGVLY S+AKLAYCS
Sbjct: 160 RIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCS 219

Query: 234 DNPLSYKSEGKTEWSYYKVVIP 256
           DNPLSYK+  +TEWSYYKV+ P
Sbjct: 220 DNPLSYKNGDQTEWSYYKVMCP 241

The following BLAST results are available for this feature:

BLAST of Lag0013028 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978793.1	1.2e-52	82.09	GLABRA2 expression modulator-like [Cucurbita maxima]	[more]
KAG7034221.1	1.2e-52	82.09	GLABRA2 expression modulator [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950807.1	1.2e-52	82.09	GLABRA2 expression modulator-like [Cucurbita moschata]	[more]
KAG6604055.1	2.0e-52	81.34	GLABRA2 expression modulator, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034359.1	2.0e-52	45.81	putative GEM-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Lag0013028 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F8	1.3e-46	69.44	GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1	[more]
Q9SE96	1.4e-37	62.99	GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1	[more]
Q9M063	2.7e-36	61.87	Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV...	[more]
Q9LYV6	3.3e-26	47.15	GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1	[more]
Q9M122	4.2e-21	38.67	GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1	[more]

BLAST of Lag0013028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUA8	5.6e-53	82.09	GLABRA2 expression modulator-like OS=Cucurbita maxima OX=3661 GN=LOC111478651 PE...	[more]
A0A6J1GFW5	5.6e-53	82.09	GLABRA2 expression modulator-like OS=Cucurbita moschata OX=3662 GN=LOC111453803 ...	[more]
A0A5D3CMF8	6.2e-52	79.85	Putative GEM-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B212	6.2e-52	79.85	putative GEM-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103484944 PE=3 SV=1	[more]
A0A6J1BUM3	8.1e-52	80.60	GLABRA2 expression modulator OS=Momordica charantia OX=3673 GN=LOC111005860 PE=3...	[more]

BLAST of Lag0013028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22475.1	9.2e-48	69.44	GRAM domain family protein	[more]
AT1G28200.1	1.0e-38	62.99	FH interacting protein 1	[more]
AT4G40100.1	1.9e-29	53.96	GRAM domain family protein	[more]
AT5G13200.1	2.4e-27	47.15	GRAM domain family protein	[more]
AT2G22475.2	4.4e-26	69.51	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	PANTHER	PTHR31969:SF36	GEM-LIKE PROTEIN 3-RELATED	coord: 174..307
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 189..266 e-value: 2.5E-21 score: 86.9
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 190..297 e-value: 7.6E-19 score: 67.7
IPR036537	Adaptor protein Cbl, N-terminal domain superfamily	GENE3D	1.20.930.20		coord: 11..124 e-value: 2.4E-5 score: 26.1
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 186..308 e-value: 3.0E-16 score: 61.2
IPR008808	Powdery mildew resistance protein, RPW8 domain	PFAM	PF05659	RPW8	coord: 2..136 e-value: 9.3E-22 score: 77.2
IPR008808	Powdery mildew resistance protein, RPW8 domain	PROSITE	PS51153	RPW8	coord: 1..150 score: 8.893597
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 174..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0013028.1	Lag0013028.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway