Lag0012933 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0012933
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionacyltransferase-like protein At3g26840, chloroplastic
Locationchr1: 45880005 .. 45880457 (-)
RNA-Seq ExpressionLag0012933
SyntenyLag0012933
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCACCGGAGCTTGTGTGTTCTCTGCTCTCCGCCATGATTGGATGTTGTCCAGCGGGAGTTTTAAATCTGGTCCGATTGCGATCCCCACTGCTCGACGGCTTGCTGTATCTACTACTTCCTTGGACCAAGTTACTTCGACATCCTCGCCGGAGACTACTGCAGCGTCGTCGCTGACGGTGAGTGATCTTTTTGGTGATGGTCTGTTCGATATGACTCATGCACGACGTGCTGCGACGGCGATTGTTGGAGTTGGTGGTGGAAGTGGAACTCGGTCGAACTCCGGTTTGGAGGATGTGAAGGTGTGGCGAAGCATGAAGGACACAACACGAAGCCGCAACGAAATTTTCCGGCTAGAACTCAGATATTTGACCGTTGTTGCAGTGATTGGAAAGGACCGTCGAATGAGGCGGCGGCGGCTAATTACCGGTGGGACCATACTACCATAA

mRNA sequence

ATGGCTGCCACCGGAGCTTGTGTGTTCTCTGCTCTCCGCCATGATTGGATGTTGTCCAGCGGGAGTTTTAAATCTGGTCCGATTGCGATCCCCACTGCTCGACGGCTTGCTGTATCTACTACTTCCTTGGACCAAGTTACTTCGACATCCTCGCCGGAGACTACTGCAGCGTCGTCGCTGACGGTGAGTGATCTTTTTGGTGATGGTCTGTTCGATATGACTCATGCACGACGTGCTGCGACGGCGATTGTTGGAGTTGGTGGTGGAAGTGGAACTCGGTCGAACTCCGGTTTGGAGGATGTGAAGGTGTGGCGAAGCATGAAGGACACAACACGAAGCCGCAACGAAATTTTCCGGCTAGAACTCAGATATTTGACCGTTGTTGCAGTGATTGGAAAGGACCGTCGAATGAGGCGGCGGCGGCTAATTACCGGTGGGACCATACTACCATAA

Coding sequence (CDS)

ATGGCTGCCACCGGAGCTTGTGTGTTCTCTGCTCTCCGCCATGATTGGATGTTGTCCAGCGGGAGTTTTAAATCTGGTCCGATTGCGATCCCCACTGCTCGACGGCTTGCTGTATCTACTACTTCCTTGGACCAAGTTACTTCGACATCCTCGCCGGAGACTACTGCAGCGTCGTCGCTGACGGTGAGTGATCTTTTTGGTGATGGTCTGTTCGATATGACTCATGCACGACGTGCTGCGACGGCGATTGTTGGAGTTGGTGGTGGAAGTGGAACTCGGTCGAACTCCGGTTTGGAGGATGTGAAGGTGTGGCGAAGCATGAAGGACACAACACGAAGCCGCAACGAAATTTTCCGGCTAGAACTCAGATATTTGACCGTTGTTGCAGTGATTGGAAAGGACCGTCGAATGAGGCGGCGGCGGCTAATTACCGGTGGGACCATACTACCATAA

Protein sequence

MAATGACVFSALRHDWMLSSGSFKSGPIAIPTARRLAVSTTSLDQVTSTSSPETTAASSLTVSDLFGDGLFDMTHARRAATAIVGVGGGSGTRSNSGLEDVKVWRSMKDTTRSRNEIFRLELRYLTVVAVIGKDRRMRRRRLITGGTILP
Homology
[Close]
BLAST of Lag0012933 vs. NCBI nr
Match: XP_022989598.1 (acyltransferase-like protein At3g26840, chloroplastic [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-26
Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 0 

Query: 1   MAATGACVFS-----ALRHDWMLSSGSFKSGPIAIPTARRLAVSTTSLDQVTSTSSPETT 60
           MAATG+CVF      ALR DWM S+GSFKSGPI IP ARRLAVS TS+DQV STSSPE T
Sbjct: 1   MAATGSCVFHGGVFLALRRDWMSSNGSFKSGPIGIPNARRLAVSATSMDQVASTSSPEIT 60

Query: 61  AASSLTVSDLFGDGLFDMTHARRAATAIVGVGGGSGTRSNSGLEDVKVWRSMKDTTRSRN 120
           A SS   S++FG G F+  H   AAT IVGVGG +G+RSN G ED++V +S+KD      
Sbjct: 61  ATSSAMESNVFGKGRFEKNH-EHAATKIVGVGGENGSRSNFGWEDMEVRKSLKDYFEQSV 120

[Close]
BLAST of Lag0012933 vs. NCBI nr
Match: XP_023529260.1 (acyltransferase-like protein At3g26840, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-24
Identity = 73/124 (58.87%), Postives = 85/124 (68.55%), Query Frame = 0 

Query: 1   MAATGACVFS-----ALRHDWMLSSGSFKSGPIAIPTARRLAVSTTSLDQVTSTSSPETT 60
           MAATG+CVF      ALR DWM S+GSFKSG I IP ARRLAVS TS+DQV STSSPE T
Sbjct: 1   MAATGSCVFHGGVFLALRRDWMSSNGSFKSGSIGIPNARRLAVSATSMDQVASTSSPEIT 60

Query: 61  AASSLTVSDLFGDGLFDMTHARRAATAIVGVGGGSGTRSNSGLEDVKVWRSMKDTTRSRN 120
           A SS   S++ G G F+  H   AAT IVGVGG +G+RSN G ED +V +S+KD      
Sbjct: 61  ATSSAVESNVLGKGRFEKNH-EHAATKIVGVGGENGSRSNFGWEDTEVRKSLKDYFEQSV 120

[Close]
BLAST of Lag0012933 vs. NCBI nr
Match: KAG6588874.1 (Acyltransferase-like protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-24
Identity = 72/124 (58.06%), Postives = 84/124 (67.74%), Query Frame = 0 

Query: 1   MAATGACVFS-----ALRHDWMLSSGSFKSGPIAIPTARRLAVSTTSLDQVTSTSSPETT 60
           MAATG+CVF      ALR DWM S+GSFKSG I IP ARRLAVS TS+DQV STSSPE T
Sbjct: 1   MAATGSCVFHGGVFLALRRDWMSSNGSFKSGSIGIPNARRLAVSATSMDQVASTSSPEIT 60

Query: 61  AASSLTVSDLFGDGLFDMTHARRAATAIVGVGGGSGTRSNSGLEDVKVWRSMKDTTRSRN 120
             SS   S++FG G F+  H   AAT  VGVGG +G+RSN G ED +V +S+KD      
Sbjct: 61  VTSSAVESNVFGKGRFEKNH-EHAATKTVGVGGENGSRSNFGWEDTEVRKSLKDYFEQSV 120

[Close]
BLAST of Lag0012933 vs. NCBI nr
Match: KAG7022633.1 (Acyltransferase-like protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-24
Identity = 72/124 (58.06%), Postives = 84/124 (67.74%), Query Frame = 0 

Query: 1   MAATGACVFS-----ALRHDWMLSSGSFKSGPIAIPTARRLAVSTTSLDQVTSTSSPETT 60
           MAATG+CVF      ALR DWM S+GSFKSG I IP ARRLAVS TS+DQV STSSPE T
Sbjct: 1   MAATGSCVFHGGVFLALRRDWMSSNGSFKSGSIGIPNARRLAVSVTSMDQVASTSSPEIT 60

Query: 61  AASSLTVSDLFGDGLFDMTHARRAATAIVGVGGGSGTRSNSGLEDVKVWRSMKDTTRSRN 120
             SS   S++FG G F+  H   AAT  VGVGG +G+RSN G ED +V +S+KD      
Sbjct: 61  VTSSAVESNVFGKGRFEKNH-EHAATKTVGVGGENGSRSNFGWEDTEVRKSLKDYFEQSV 120

[Close]
BLAST of Lag0012933 vs. NCBI nr
Match: XP_022928561.1 (acyltransferase-like protein At3g26840, chloroplastic [Cucurbita moschata])

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23
Identity = 71/124 (57.26%), Postives = 84/124 (67.74%), Query Frame = 0 

Query: 1   MAATGACVFS-----ALRHDWMLSSGSFKSGPIAIPTARRLAVSTTSLDQVTSTSSPETT 60
           MAATG+CVF      ALR DWM S+GSFKSG I IP ARRLAVS TS++QV STSSPE T
Sbjct: 1   MAATGSCVFHGGVFLALRRDWMSSNGSFKSGSIGIPNARRLAVSATSMNQVASTSSPEIT 60

Query: 61  AASSLTVSDLFGDGLFDMTHARRAATAIVGVGGGSGTRSNSGLEDVKVWRSMKDTTRSRN 120
             SS   S++FG G F+  H   AAT  VGVGG +G+RSN G ED +V +S+KD      
Sbjct: 61  VTSSAVESNVFGKGRFEKNH-EHAATKTVGVGGENGSRSNFGWEDTEVRKSLKDYFEQSV 120

The following BLAST results are available for this feature:
BLAST of Lag0012933 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989598.15.7e-2660.48acyltransferase-like protein At3g26840, chloroplastic [Cucurbita maxima][more]
XP_023529260.12.4e-2458.87acyltransferase-like protein At3g26840, chloroplastic [Cucurbita pepo subsp. pep... [more]
KAG6588874.15.4e-2458.06Acyltransferase-like protein, chloroplastic, partial [Cucurbita argyrosperma sub... [more]
KAG7022633.15.4e-2458.06Acyltransferase-like protein, chloroplastic [Cucurbita argyrosperma subsp. argyr... [more]
XP_022928561.12.0e-2357.26acyltransferase-like protein At3g26840, chloroplastic [Cucurbita moschata][more]
BLAST of Lag0012933 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0012933.1Lag0012933.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016746 acyltransferase activity