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Lag0012824 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCTCCTGTGGGCTTCCTCCTCCTTTCTGCAAGAGCCGTCGCCTCCCCTCTGTAAGTTGCTTGGTTTCTCGATCTTACTCCATCTTTCACCGTTTGAGTTAGAGATGAGTATTTGGTTCTGAAATTCTATAATCAAAATCAAATGTGGAAATCTATGGTAAATGTAGTTCCTTTTCTTTTGCTGTGGTTTTGAGTTGAGTTAGTTTTGTTTAGATCAGATTGTTCTTTGTTGTAATTTGAGTTTTGTTGATTTGAATTGCTCCTCTATCTCTGTTGCGGGTTGTGCGAGTTGGCATTCTTCCTTTACTGTCTCCATGTTTCGAGCTCTCCTTGTATGTATTAAGCCATCCAACCCTTTTGCAATTAGGGTTTGATTTCATTCTTTTTCACATTCCCAGCCGCACGGTTGCATTTCTTCCTCTTTCTTTTCCATTTCATTCTTTACCTTTAGCTCACAGCCATTGCAGCCCCTCACTACTCCCTCTTGTTGCCTTGCTGCCGCCGCCGGCTACACGCTGCCACAGTCTCGCTGAGGCATCTCTGAGATTTGTTCCGCTGCCCCATCCCACGCCCCGGTGATGTTATAGCAGAGAAGAAGCGGGTTGTTGATATGGAAGACAAGAGAGAAGAGGGAAAACCGACGAACTTGACCAATAAAACTGAACTTGAACTTGAACTGAAATGAACTGCCTTCGTTCCTAACTAATATCTGGTTTGATTCTACTTATAAATACCACTGAAACGATGGATTTGTCTATTTTAACGAAGAACCAAACCGAACCTGGATTACGAAAACTTCCTCCAATATTTTCAATATTGATAGAGGTCTAGATTTCTAGTAAACATTGTTTTTACATGTTTTTATTTTCTTTCTGCAGATTGAGAAGGTTAGAAGATTGCTGCAGCTTGTGTAGGAGTAGTAAACTATAAACCAAAGGACATAAGGATCACCACCATGGCAAACAGGCGGTGTTTACAAATACTAACTCGTCATGCCTCAGCCATTATTTCCACAAAGGCATATATCCACTCGCTGAAAATTGCACCTTCATTTCTTTCCCAGAATTTCCATACACATGCTTCTGTATCAACCTGTCTTCATACTAAAATTGATCATTCTTTGTGTACCTACTGGTCACATTCCCGATATCTCTCATCTGATAGTCGTAATGGCAACGAAGATGATGATACTGAAGAAGATGAAGATGATGATGAGGAAGCATATGATAGTAGTGAGGATGATAGTGTTTCGGTGTCGAGTAGGGGTATGCAAAAGGAGTATACGAAGGAGGAGAAGGAGGCAGAAGCAGCTGCTATTGGATATGAAGTAGTAGGGCCACTCGATCAGTCTGATGGGGTCTTCAAACCTTATGAACCTGTCTTTGCTGTTGTTCAGGTTCAAACTTCTGGCATGTCTTAATGAGTTTTTTGAATTACTAGTTGGACACTTATCATTTACGCACTCTTTTCTCTTGGTGGTTCTTGTAGATTGGCTCACACCAATTTAAGGTTAGCAATGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGCAATGTGAATGACAAGGTGTGTAACTCCTATACCATTCTTCATTGTTGATTTTTTAGATATAGTTTATCATTTCTAATCTACATCCTTGCATTTGGCCATCTTTCTACATGGTCTTCCGCTCCTGATCTTTTGAAATTTGCCCTCCAACCTGACTAGTAATACTGCCTCTTTAAATGGTGTTAACCACTTGGAAGTCATTTTTGGAACTTAGAATTAAAATGTCGTATGATTTAAGATTGTTTCCAATTCTGCTATTGTTTCCAGGTCATAATTAGCAAAGCTAAAGTTGTGGTATTTCTTTTTTTGGCCAATTTGTTTTGCACTTTTGCCTTGTCTGACTTGAATGCTGTTCTGTAGATTTTCTCATGTTTGCTGTTATACCTTGCCCATTCAGGATTCTGATCGTCATGCTTTTCTGTATTTCATTTTGGATTCTTGAGCAAGCTTTAATGATTTGTTTTAATTGATTTATCTTTTGCAGTTGATATTGAATAGGGTTCTCTTGCTTGGCTCAAGTAGCCAAACGATTGTAGGTAGGCCAACAGTACCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGTAAGAGTGATAGCTAAACTACTTACTCACCTTTTGTTGTTAATGCAATATGTTATACAGAAGAAAAATTTTCTGTTGTGTTCTTACTGATGTTAACTAATGATTCTCGTGGACCATTGCAATGCATTTTTCAAGGACTAGTTCCTAGTTCTTCTTGTGCTTAAGAAAATATACTTCTAGTCTTAGTTGCATCTGGGAACCTCTATACTAAATCAATTTAGACAATGCAATTGTTAAAATAGGAAGATCTAATTTGTTAGTCAATGTGTAAGCAATGCATTTTCTACATTAATATATCCATCAGGTTAGAAGATAATAATAAAATCTGGAGACTACAATGTTCGGAAAATGTCTAAAAAGCGTTTCCTTCTAGCAGTTGTTGCTTTAAGGGATTATAGAATGACAGGGGTTTGGTAAATGAATTGACCAAGTTGTCTGCCTTTCCCACTTGTGACAAAATCTTTCTTCCAATGCTAATACTGAAGTATAAAGTGGAATACATTTGTTGTAGTAATTGATTTCATCATGACAACTTTCTTCTGTGACTATGGTTGGTCTGTGAGTGTAAATCTTTTCCCCGCTTTCTCTTTTGCTTCAAATCCCCAACCACAGATTTTCTTCGAAGCCTTGTTCTCAAATTTGTATTCCAATTTGTAAGAACTGAATGCTTTTAACGCTTTTTCAATAGGCATTAGATGCAAAAGTAATCATCTTCAAGAAAAAGAGGAGGAAGAATTACCGCAGAACCAAAGGACATCGCCAGGTATATTCAGACTATCTAGAACGAATAAAAGAAGTTTCTTATTCAAGTTATCTGATGTTCCTTTTTGGCTATGTTTTTTGTATCTTAGGAATTAACCAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAGCAGCTGGTAAGAAGCAAGAAAAAGTTGCAGTAGCTGCTTAG ATGTCGCTCCTGTGGGCTTCCTCCTCCTTTCTGCAAGAGCCGTCGCCTCCCCTCTCTCACAGCCATTGCAGCCCCTCACTACTCCCTCTTGTTGCCTTGCTGCCGCCGCCGGCTACACGCTGCCACAGTCTCGCTGAGGCATCTCTGAGATTTGTTCCGCTGCCCCATCCCACGCCCCGTCGTAATGGCAACGAAGATGATGATACTGAAGAAGATGAAGATGATGATGAGGAAGCATATGATAGTAGTGAGGATGATAGTGTTTCGGTGTCGAGTAGGGGTATGCAAAAGGAGTATACGAAGGAGGAGAAGGAGGCAGAAGCAGCTGCTATTGGATATGAAGTAGTAGGGCCACTCGATCAGTCTGATGGGGTCTTCAAACCTTATGAACCTGTCTTTGCTGTTGTTCAGATTGGCTCACACCAATTTAAGGTTAGCAATGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGCAATGTGAATGACAAGTTGATATTGAATAGGGTTCTCTTGCTTGGCTCAAGTAGCCAAACGATTGTAGGTAGGCCAACAGTACCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCATTAGATGCAAAAGTAATCATCTTCAAGAAAAAGAGGAGGAAGAATTACCGCAGAACCAAAGGACATCGCCAGGAATTAACCAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAGCAGCTGGTAAGAAGCAAGAAAAAGTTGCAGTAGCTGCTTAG ATGTCGCTCCTGTGGGCTTCCTCCTCCTTTCTGCAAGAGCCGTCGCCTCCCCTCTCTCACAGCCATTGCAGCCCCTCACTACTCCCTCTTGTTGCCTTGCTGCCGCCGCCGGCTACACGCTGCCACAGTCTCGCTGAGGCATCTCTGAGATTTGTTCCGCTGCCCCATCCCACGCCCCGTCGTAATGGCAACGAAGATGATGATACTGAAGAAGATGAAGATGATGATGAGGAAGCATATGATAGTAGTGAGGATGATAGTGTTTCGGTGTCGAGTAGGGGTATGCAAAAGGAGTATACGAAGGAGGAGAAGGAGGCAGAAGCAGCTGCTATTGGATATGAAGTAGTAGGGCCACTCGATCAGTCTGATGGGGTCTTCAAACCTTATGAACCTGTCTTTGCTGTTGTTCAGATTGGCTCACACCAATTTAAGGTTAGCAATGGAGATAGTATTTTTACTGAGAGATTAAAATTCTGCAATGTGAATGACAAGTTGATATTGAATAGGGTTCTCTTGCTTGGCTCAAGTAGCCAAACGATTGTAGGTAGGCCAACAGTACCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCATTAGATGCAAAAGTAATCATCTTCAAGAAAAAGAGGAGGAAGAATTACCGCAGAACCAAAGGACATCGCCAGGAATTAACCAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAGCAGCTGGTAAGAAGCAAGAAAAAGTTGCAGTAGCTGCTTAG MSLLWASSSFLQEPSPPLSHSHCSPSLLPLVALLPPPATRCHSLAEASLRFVPLPHPTPRRNGNEDDDTEEDEDDDEEAYDSSEDDSVSVSSRGMQKEYTKEEKEAEAAAIGYEVVGPLDQSDGVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCNVNDKLILNRVLLLGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTKLRIIDIQGIDKPENIGKPSKAAGKKQEKVAVAA Homology
BLAST of Lag0012824 vs. NCBI nr
Match: XP_038886741.1 (50S ribosomal protein L21, mitochondrial [Benincasa hispida]) HSP 1 Score: 348.6 bits (893), Expect = 4.7e-92 Identity = 188/201 (93.53%), Postives = 195/201 (97.01%), Query Frame = 0
BLAST of Lag0012824 vs. NCBI nr
Match: KAG7027159.1 (50S ribosomal protein L21, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 347.1 bits (889), Expect = 1.4e-91 Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 0
BLAST of Lag0012824 vs. NCBI nr
Match: XP_022132514.1 (50S ribosomal protein L21, mitochondrial [Momordica charantia] >XP_022132515.1 50S ribosomal protein L21, mitochondrial [Momordica charantia]) HSP 1 Score: 341.3 bits (874), Expect = 7.5e-90 Identity = 182/199 (91.46%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of Lag0012824 vs. NCBI nr
Match: KAG6595143.1 (50S ribosomal protein L21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 340.9 bits (873), Expect = 9.8e-90 Identity = 196/255 (76.86%), Postives = 213/255 (83.53%), Query Frame = 0
BLAST of Lag0012824 vs. NCBI nr
Match: XP_022963236.1 (50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata] >XP_022963238.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata] >XP_022963239.1 50S ribosomal protein L21, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 339.0 bits (868), Expect = 3.7e-89 Identity = 183/204 (89.71%), Postives = 192/204 (94.12%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy Swiss-Prot
Match: Q8L9A0 (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL21M PE=1 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.9e-60 Identity = 129/202 (63.86%), Postives = 159/202 (78.71%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy Swiss-Prot
Match: P24613 (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.9e-25 Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy Swiss-Prot
Match: P51412 (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL21 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.3e-22 Identity = 60/149 (40.27%), Postives = 89/149 (59.73%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy Swiss-Prot
Match: A8GYB4 (50S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rplU PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.8e-17 Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy Swiss-Prot
Match: Q1RGM7 (50S ribosomal protein L21 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rplU PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.8e-17 Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy TrEMBL
Match: A0A6J1BT96 (50S ribosomal protein L21, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005353 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 3.6e-90 Identity = 182/199 (91.46%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy TrEMBL
Match: A0A6J1HFL5 (50S ribosomal protein L21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111463511 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.8e-89 Identity = 183/204 (89.71%), Postives = 192/204 (94.12%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy TrEMBL
Match: A0A6J1KVI7 (50S ribosomal protein L21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496817 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 4.0e-89 Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy TrEMBL
Match: A0A6J1KDZ7 (50S ribosomal protein L21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111494006 PE=3 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.6e-85 Identity = 174/200 (87.00%), Postives = 187/200 (93.50%), Query Frame = 0
BLAST of Lag0012824 vs. ExPASy TrEMBL
Match: A0A0A0KFG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G357000 PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 2.1e-85 Identity = 176/201 (87.56%), Postives = 191/201 (95.02%), Query Frame = 0
BLAST of Lag0012824 vs. TAIR 10
Match: AT4G30930.1 (Ribosomal protein L21 ) HSP 1 Score: 233.4 bits (594), Expect = 2.0e-61 Identity = 129/202 (63.86%), Postives = 159/202 (78.71%), Query Frame = 0
BLAST of Lag0012824 vs. TAIR 10
Match: AT1G35680.1 (Ribosomal protein L21 ) HSP 1 Score: 106.3 bits (264), Expect = 3.8e-23 Identity = 60/149 (40.27%), Postives = 89/149 (59.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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