Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAGAAAAACATCAGAGCCTCTGGTTCTTGGAAGAGTGATTGGAGATGTTGTGGATTCCTTCATTCCAACCATTAAAATGTCAATCACTTTCTGCAACAAGCAAGTCCTCAATGGCCATGAATTCTTCCCTTCTTCACTCACCTTCAAACCTAGGGTTCACATTCAAGGAGAAGACATGAGGTCTTTATTCACTCTGGTAAACTCAAAATCTCTCCTTTTAAACTAACCCTTTTTTCTTTCTTTGAACTGATATTTGATCTTTTTTTTTTTTTTTTTTGTTTGGTTAGATCATGATTGACCCTGATGTTCCTGGCCCTAGTGATCCATACTTGAGAGAACACCTCCACTGGTAAAAAAAAACAATTAATTAAAATCTCCATTGATGATCTTGAGATTTTGAGCTTTAAAGTTGGAAAAAATGTAACTTTGATGAAAACCCATCACCAAAAAAGCAATTTTTTTTTTCTTTTGTTTAGGTTAAAAAGAGAATCTTTTTGTTACCTAATTTTTGGCCATTATTATGAATCTCTTTTCCAGGTTGGTGACTGACATTCCAGGAACTACTGATGCTACTTTTGGTATAGGTTTCAAACTTGTAATTTTTATTAAAGAGAGAGAGAGAGAGCAATTGAAATGAAGGGGTTTATTTATTTATATAATTAATTTAATTTGGTGGTGACAGGAAAAGAAGAAATGAGCTATGAAATTCCAAAGCCTACAATAGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACGGCGTCGTTCAGTGAACCCTCCTTCTTCAAGGGATCATTTCAACACTCGAAGATTTTCAGCTGAGAATGATTTGGGTCTTCCAGTGGCTGCTGTCTATTTCAATGCACAAAGAGAAACTGCTGCAAGGAGGCGATAA
mRNA sequence
ATGGCAACAAGAAAAACATCAGAGCCTCTGGTTCTTGGAAGAGTGATTGGAGATGTTGTGGATTCCTTCATTCCAACCATTAAAATGTCAATCACTTTCTGCAACAAGCAAGTCCTCAATGGCCATGAATTCTTCCCTTCTTCACTCACCTTCAAACCTAGGGTTCACATTCAAGGAGAAGACATGAGGTCTTTATTCACTCTGATCATGATTGACCCTGATGTTCCTGGCCCTAGTGATCCATACTTGAGAGAACACCTCCACTGGTTGGTGACTGACATTCCAGGAACTACTGATGCTACTTTTGGAAAAGAAGAAATGAGCTATGAAATTCCAAAGCCTACAATAGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACGGCGTCGTTCAGTGAACCCTCCTTCTTCAAGGGATCATTTCAACACTCGAAGATTTTCAGCTGAGAATGATTTGGGTCTTCCAGTGGCTGCTGTCTATTTCAATGCACAAAGAGAAACTGCTGCAAGGAGGCGATAA
Coding sequence (CDS)
ATGGCAACAAGAAAAACATCAGAGCCTCTGGTTCTTGGAAGAGTGATTGGAGATGTTGTGGATTCCTTCATTCCAACCATTAAAATGTCAATCACTTTCTGCAACAAGCAAGTCCTCAATGGCCATGAATTCTTCCCTTCTTCACTCACCTTCAAACCTAGGGTTCACATTCAAGGAGAAGACATGAGGTCTTTATTCACTCTGATCATGATTGACCCTGATGTTCCTGGCCCTAGTGATCCATACTTGAGAGAACACCTCCACTGGTTGGTGACTGACATTCCAGGAACTACTGATGCTACTTTTGGAAAAGAAGAAATGAGCTATGAAATTCCAAAGCCTACAATAGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACGGCGTCGTTCAGTGAACCCTCCTTCTTCAAGGGATCATTTCAACACTCGAAGATTTTCAGCTGAGAATGATTTGGGTCTTCCAGTGGCTGCTGTCTATTTCAATGCACAAAGAGAAACTGCTGCAAGGAGGCGATAA
Protein sequence
MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGEDMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFVLFKQKRRRSVNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR
Homology
BLAST of Lag0012757 vs. NCBI nr
Match:
XP_022978007.1 (protein TERMINAL FLOWER 1-like [Cucurbita maxima])
HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 159/174 (91.38%), Postives = 164/174 (94.25%), Query Frame = 0
Query: 1 MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGE 60
MAT+ +PLVLGRVIGDVVD FIPTIKM TF NKQVLNGHEFFPSSL+FKPRV IQGE
Sbjct: 6 MATKMAEQPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGE 65
Query: 61 DMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
DMRSLFTLIM+DPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHR
Sbjct: 66 DMRSLFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHR 125
Query: 121 FVFVLFKQKRRRSVNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
FVFVLFKQKRRRSVNPPSSRD FNTRRFSAENDLGLPVAAVYFNAQRETAARRR
Sbjct: 126 FVFVLFKQKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 179
BLAST of Lag0012757 vs. NCBI nr
Match:
XP_038883648.1 (protein TERMINAL FLOWER 1-like [Benincasa hispida])
HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 156/174 (89.66%), Postives = 164/174 (94.25%), Query Frame = 0
Query: 1 MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGE 60
MA + +PLVLGRVIGDVVD F+PTIKMS++F NKQVLNGHEFFPSSLTFKPRV IQGE
Sbjct: 1 MARKIAEQPLVLGRVIGDVVDPFVPTIKMSVSFSNKQVLNGHEFFPSSLTFKPRVRIQGE 60
Query: 61 DMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
DMRSLFTL+M+DPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR
Sbjct: 61 DMRSLFTLVMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
Query: 121 FVFVLFKQKRRRSVNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
FVFVLFKQKRRRSVN PSSRD FNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 121 FVFVLFKQKRRRSVNTPSSRDRFNTRRFSGENDLGLPVAAVYFNAQRETAARRR 174
BLAST of Lag0012757 vs. NCBI nr
Match:
KAG6604356.1 (CEN-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 157/174 (90.23%), Postives = 162/174 (93.10%), Query Frame = 0
Query: 1 MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGE 60
MAT+ +PLVLGRVIGDVVD FIPTIKM TF NKQVLNGHEFFPSSL+FKPRV IQGE
Sbjct: 6 MATKMGEQPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVVIQGE 65
Query: 61 DMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
DMRS FTLIM+DPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHR
Sbjct: 66 DMRSFFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHR 125
Query: 121 FVFVLFKQKRRRSVNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
FVFVLFKQKRRRSVNPPSSRD FNTRRFSAENDLGLPVA VYFNAQRETAARRR
Sbjct: 126 FVFVLFKQKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAVVYFNAQRETAARRR 179
BLAST of Lag0012757 vs. NCBI nr
Match:
XP_023545007.1 (protein TERMINAL FLOWER 1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 156/174 (89.66%), Postives = 162/174 (93.10%), Query Frame = 0
Query: 1 MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGE 60
MAT+ +PLVLGRVIGDVVD FIPTIKM TF NKQVLNGHEFFPSSL+FKPRV IQGE
Sbjct: 6 MATKMAEQPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVVIQGE 65
Query: 61 DMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
DMRS FTLIM+DPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHR
Sbjct: 66 DMRSFFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHR 125
Query: 121 FVFVLFKQKRRRSVNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
FVFVLFKQKRRRS+NPPSSRD FNTRRFSAENDLGLPVA VYFNAQRETAARRR
Sbjct: 126 FVFVLFKQKRRRSLNPPSSRDRFNTRRFSAENDLGLPVAVVYFNAQRETAARRR 179
BLAST of Lag0012757 vs. NCBI nr
Match:
XP_022925794.1 (protein TERMINAL FLOWER 1-like [Cucurbita moschata])
HSP 1 Score: 324.3 bits (830), Expect = 6.3e-85
Identity = 156/174 (89.66%), Postives = 161/174 (92.53%), Query Frame = 0
Query: 1 MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGE 60
MAT+ +PLVLGRVIGDVVD FIPTIKM TF NKQVLNGHEFFPSSL+FKPRV IQGE
Sbjct: 6 MATKMGEQPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVVIQGE 65
Query: 61 DMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
DMRS FTLIM+DPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYE PKPTIGIHR
Sbjct: 66 DMRSFFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYETPKPTIGIHR 125
Query: 121 FVFVLFKQKRRRSVNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
FVFVLFKQKRRRSVNPPSSRD FNTRRFSAENDLGLPVA VYFNAQRETAARRR
Sbjct: 126 FVFVLFKQKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAVVYFNAQRETAARRR 179
BLAST of Lag0012757 vs. ExPASy Swiss-Prot
Match:
P93003 (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1)
HSP 1 Score: 265.4 bits (677), Expect = 4.6e-70
Identity = 124/175 (70.86%), Postives = 151/175 (86.29%), Query Frame = 0
Query: 1 MATRKTSEPLVLGRVIGDVVDSFIPTIKMSITFCNKQVLNGHEFFPSSLTFKPRVHIQGE 60
M TR EPL++GRV+GDV+D F PT KM++++ KQV NGHE FPSS++ KPRV I G
Sbjct: 4 MGTR-VIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGG 63
Query: 61 DMRSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHR 120
D+RS FTL+MIDPDVPGPSDP+L+EHLHW+VT+IPGTTDATFGKE +SYE+P+P+IGIHR
Sbjct: 64 DLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHR 123
Query: 121 FVFVLFKQKRRRSVNPP-SSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
FVFVLF+QK+RR + P SRDHFNTR+F+ E DLGLPVAAV+FNAQRETAAR+R
Sbjct: 124 FVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177
BLAST of Lag0012757 vs. ExPASy Swiss-Prot
Match:
Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 6.6e-69
Identity = 122/172 (70.93%), Postives = 147/172 (85.47%), Query Frame = 0
Query: 5 KTSEPLVLGRVIGDVVDSFIPTIKMSITF-CNKQVLNGHEFFPSSLTFKPRVHIQGEDMR 64
K S+PLV+GRVIG+VVD F P++KMS+T+ +K V NGHE FPSS+T KPRV + G D+R
Sbjct: 4 KMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLR 63
Query: 65 SLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVF 124
S FT+IMIDPDVPGPSDPYLREHLHW+VTDIPGTTD +FGKE + YE+P+P IGIHRFVF
Sbjct: 64 SFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVF 123
Query: 125 VLFKQKRRRSV-NPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
+LFKQK+R++V P SRD FNTR+F+ EN+LG PVAAV+FN QRETAARRR
Sbjct: 124 LLFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175
BLAST of Lag0012757 vs. ExPASy Swiss-Prot
Match:
Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 1.9e-68
Identity = 121/172 (70.35%), Postives = 147/172 (85.47%), Query Frame = 0
Query: 5 KTSEPLVLGRVIGDVVDSFIPTIKMSITF-CNKQVLNGHEFFPSSLTFKPRVHIQGEDMR 64
K S+PLV+GRVIG+VVD F P++KMS+T+ +K V NGHE FPSS+T KPRV + G D+R
Sbjct: 4 KMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLR 63
Query: 65 SLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVF 124
S FTLIMIDPDVPGPSDPYLREHLHW+VTDIPGTTD +FG+E + YE+P+P IGIHRFVF
Sbjct: 64 SFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVF 123
Query: 125 VLFKQKRRRS-VNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
+LFKQK+R++ ++ P SRD FNTR+FS EN+LG PVAA +FN QRETAARRR
Sbjct: 124 LLFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175
BLAST of Lag0012757 vs. ExPASy Swiss-Prot
Match:
O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 1.9e-68
Identity = 121/172 (70.35%), Postives = 147/172 (85.47%), Query Frame = 0
Query: 5 KTSEPLVLGRVIGDVVDSFIPTIKMSITF-CNKQVLNGHEFFPSSLTFKPRVHIQGEDMR 64
K EPLV+GRVIG+VVD F P++KMS+ + NK V NGHEFFPSS+T KPRV + G D+R
Sbjct: 4 KMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLR 63
Query: 65 SLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVF 124
S FTLIMIDPDVPGPSDPYLREHLHW+VTDIPGTTD +FG+E + YE+P+P IGIHRFVF
Sbjct: 64 SFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVF 123
Query: 125 VLFKQKRRRSV-NPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
+LFKQK+R+++ + P SRD F++R+FS EN+LG PVAAV+FN QRETAARRR
Sbjct: 124 LLFKQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175
BLAST of Lag0012757 vs. ExPASy Swiss-Prot
Match:
Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 2.1e-67
Identity = 120/173 (69.36%), Postives = 146/173 (84.39%), Query Frame = 0
Query: 4 RKTSEPLVLGRVIGDVVDSFIPTIKMSITF-CNKQVLNGHEFFPSSLTFKPRVHIQGEDM 63
R +S+PL++GRVIGDVVD+ + +KM++T+ +KQV NGHE FPS +T+KP+V + G DM
Sbjct: 3 RISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDM 62
Query: 64 RSLFTLIMIDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFV 123
RS FTL+M DPDVPGPSDPYLREHLHW+VTDIPGTTD +FGKE + YE+P+P IGIHRFV
Sbjct: 63 RSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFV 122
Query: 124 FVLFKQKRRRS-VNPPSSRDHFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 175
++LFKQ RR S V+ PS RD FNTR F+ ENDLGLPVAAV+FN QRETAARRR
Sbjct: 123 YLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P93003 | 4.6e-70 | 70.86 | Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1 | [more] |
Q9XH43 | 6.6e-69 | 70.93 | CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1 | [more] |
Q9XH42 | 1.9e-68 | 70.35 | CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1 | [more] |
O82088 | 1.9e-68 | 70.35 | Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1 | [more] |
Q9ZNV5 | 2.1e-67 | 69.36 | Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1 | [more] |