Lag0012722 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0012722
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionP-loop NTPase domain-containing protein LPA1 homolog 1-like
Locationchr1: 43698925 .. 43702518 (-)
RNA-Seq ExpressionLag0012722
SyntenyLag0012722
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTCTGTGGAGCTATGGATTTGGTCCACCTACGGCGCCGCCTGCGCACAGACGCCCCACAGTGGTTCTGGGTTGAAGTAATCTCAATATTTTCTCAATTTTTCTGAATGTTCGCACCATTCAGCATTCAATTCAATTTTTTGGCCAATTCTTTTTCCTTTATTTTAACTTGCTTTACATATGCTCTTCTCGATTACAGTTTCTCTGTTCCTTATAAATGGACCACTCTCACACTATCCTTACTACTATTGCAACTCTCTTTTCAAAGCAGAATTTTTACTCAACAACATTTTGGTCCTCCTATTTATCATTTGTTTCAATCCAGTTATTGGTAGAAATATAATAACTTTTTTGGCTAAATATATGTTTTAGTTTATGAAGGGGAGATAATTTTTCAATTTAATCCCTTACTGTTGGTGAATATTAGAATGAACAATACTTGGTTGTCAACGTTTTAGTGGTGGTGTGTAGGGAGGTACCTACACACTAGTAAGTAGCCAAATATTATCTTATTAGAATTGGTTGACAAAAAACCTACATTGACAATGACATAATATTTAGTGCATTGGTGGAAATTTAAAGAAAGTCATTTAAGAAAACTTTTTCTTAAGAGTTCAACATGTGGGGATTGGAATATTCAAACTTCTGATCTCTTTGGTTTGGTCCTTGAGGTTTGGGTTAGGTTTTATTTTGGTTCCTGAGTTTTCAAACTCGACAATTTAGTCCCTGAGGTTTGGATTTCATTTCATTTTAGTCCCTCCATCCAATTTTTCATTAATATTTAATAGATTGCTGACGTGACATTGTTTTTTAATTTAAAAAAATTATTTTTAAAAATTTTAAAATAGAAATATATTAAATAATAAAAACATTATTATTTTATATTATATTAAAAATTAGAAGAAGAAGAAGGGGGAGGGAGAAATAAATAAAAATAATAATATTTTATTATTTTAATATATTTATATTTAAAAAATTTTAAAAATAATTTTTTTAATAAAAAAATCAATGCCAACAATCCGTTAAAATATTAACGAAAAATTGGATGGAGGGACTAAAATAAAAGGAAATCCAAACCTCAGTGGCTAAATTGTCGAGTTTGAAAACTCAGGGACCAAAAGTGTATTTTTTCCAATATCAAATGATGATTCTCTCAACATGGGAATCTTAGGACTTTGTTGGTATGCAATTTGGATTCTATTTTATGTTATACAATAATCAAATGAATTTAATTGAAGATCCATTTGAAACATGAACAACTTTTTAAATTGGGATTACATTGAAATTCGGTTTCTAAATTTGCTACTAAAACACATAAAAACACTAAAAAATAAAGGATAATTGTAATGGGTGGCAAAATTAGGGTAAATAATTGCAATTTTAGCAATTTTTTAAAAATATTTGCAAATATGGCAAAATTTTTGAATTAATTTTTTATATCCCTATTTTGCCCCTTGCGCGCGCATCTGGTCTCCTCAATTTTTGTTTTGGTAGGTTTCTATCTGATAGAAAGTTTTTCTATCACTGATAGAACTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTTCTATCAGATAGAAAGTTCTTTCTATCAGATAGAAAGTTGAGAACTTTCTATCTGATAGAAAGTTTTTCTATCACTGATAGATTCTATCGGTGATAGAAAAACTTTCTATCTGATAGAAAATTTTTCTATCACTGATAGATTCTATCGGTGATAGAAAAACTTTCTATCAGATAGAAAGTTGAGAACTTTCTATCAGATAGAAAGTTCTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACATTCTATCAGATAGAAAGTTCTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTTCTAACAGATAGAAAGTTGAGAACTTTCTATCTGATAGAAAATTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTTCTATCAGTGATAGAAAAACTTTCTATAGTGATAGAAAAACTTCTATCACTGATAGAATCTATCAGTGATAGAAGTTTTTCTATCACTGATAGAAGTTTTTCTATCACTTTCTATCAGTGATAGAAGTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAATCAGTGATAGAAACTTCTATCACTGAGAAAACTTTCTATCAGTGATAGAAAACTTTCTATCAGTGATAGAAATTTTCTATCACTGATAGAACGTTTTTCTATCATTGATAGAATCTATCAGTGATAGAAAAAAACACTGATAGAATTAACTTTCTATCAGTGATAGAAAAATTTTCTATCAGTAATTTTTCTATCACTGATAGAATCTATCAATGATAGAAACGTTTCTATCACTGATAGATTCTATCAGTGATAGAAATCTTCTATCACTGATAGAAAATTTTTCTATCAGTGATAGAAAACTTTTCTATCACTGATAGAAACGTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAATTTTCTATCAGTAATTTTTCTATCACTGATAGAATCTATCACTGATAGAAACGTTTCTATCATTGATAGAAATCTTCTATCACTGATAGAAAATTTTTCTATCAGTGATAGAAAACTTTTCTATCACTGATAGAAACGTTTCTATCTATCAGTGATAACTTTCTATCAGTGATAGAAGTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACTTCTATCACTGATAGAATTATTTCTATCAGTGATAGAAAACTTTCTATCACTGATAGAACGCTTTTCTATCATTGATAGAATCTATCAGTGATAGAAAAAAACACTGATAGAATTAACTTTCTATCAGTGATAGAAACGTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAATTTTCTATCAGTGATAGAAATCTTCTATCACTGATAGAAAATTTTTCTATCAGTGATAGAAAACTTTTCTATCACTGATAGAAACGTTTCTATCACTGATAGAAAGTTAATTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTGCTTCTTCGTCTTTTCATTTCAATTCGGTTTTCTTTCACGTGCATTTGAGACATTGTCCATCCAATGTCCTTGTCTCTCTGTTCAATCATTGGATTTTGATTTTATTTTCAGTTTCTTAATTAATGTCTAGGGAATTCGATTGGCTTGCCTGCCTTTCACGCGGATGGTGGAGGTCGCTAAGATGTTGTATATAGTGGTTCTCGATTATGAAGAACAAGAAAAGAAGGAGAAGGAGTCTTTCCGCTATACTCGCGCCGTTTTGCAAAGCACTCTGCAGCTTATGGGTTGTAAGGCACGACATGCTTTCAAGGTGCTTCATCTTTAACGCCTTTTTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCAACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCGTGTTCCTCGTCAATCGTGGAGGATGGAGATGACCGGAAAAGTAGAGAAGAAAATAGAAAGGGCATTTTAG

mRNA sequence

ATGTTGGTCTGTGGAGCTATGGATTTGGTCCACCTACGGCGCCGCCTGCGCACAGACGCCCCACAGTGGTTCTGGGTTGAAGGAATTCGATTGGCTTGCCTGCCTTTCACGCGGATGGTGGAGGTCGCTAAGATGTTGTATATAGTGGTTCTCGATTATGAAGAACAAGAAAAGAAGGAGAAGGAGTCTTTCCGCTATACTCGCGCCGTTTTGCAAAGCACTCTGCAGCTTATGGGTTCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCAACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCGTGTTCCTCGTCAATCGTGGAGGATGGAGATGACCGGAAAAGTAGAGAAGAAAATAGAAAGGGCATTTTAG

Coding sequence (CDS)

ATGTTGGTCTGTGGAGCTATGGATTTGGTCCACCTACGGCGCCGCCTGCGCACAGACGCCCCACAGTGGTTCTGGGTTGAAGGAATTCGATTGGCTTGCCTGCCTTTCACGCGGATGGTGGAGGTCGCTAAGATGTTGTATATAGTGGTTCTCGATTATGAAGAACAAGAAAAGAAGGAGAAGGAGTCTTTCCGCTATACTCGCGCCGTTTTGCAAAGCACTCTGCAGCTTATGGGTTCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCAACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTCTTCTCGTGTTCCTCGTCAATCGTGGAGGATGGAGATGACCGGAAAAGTAGAGAAGAAAATAGAAAGGGCATTTTAG

Protein sequence

MLVCGAMDLVHLRRRLRTDAPQWFWVEGIRLACLPFTRMVEVAKMLYIVVLDYEEQEKKEKESFRYTRAVLQSTLQLMGSAAAKAAHMHNLDLNDHHSHVDDDLTEIIQLPTLGFRLPSSRVPRQSWRMEMTGKVEKKIERAF
Homology
[Close]
BLAST of Lag0012722 vs. NCBI nr
Match: XP_022140389.1 (P-loop NTPase domain-containing protein LPA1 homolog 1-like [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-09
Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 39 MVEVAKMLYIVVLDYEEQEKKEKESFRYTRAVLQSTLQLMGSAAAKA 86
          M EVAK+LYIVVLDYEEQ KKEKESFRYTR VLQSTLQLMG  A  A
Sbjct: 1  MAEVAKVLYIVVLDYEEQLKKEKESFRYTRPVLQSTLQLMGCKARHA 47

[Close]
BLAST of Lag0012722 vs. NCBI nr
Match: XP_011657017.1 (P-loop NTPase domain-containing protein LPA1 homolog 1 [Cucumis sativus] >KGN46861.1 hypothetical protein Csa_021005 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 39 MVEVAKMLYIVVLDYEEQEKKEKESFRYTRAVLQSTLQLMGSAAAKA 86
          M +VAK+LY+V+LDYEEQ KKEKESFRYTR VLQSTLQLMG  A  A
Sbjct: 1  MADVAKVLYVVILDYEEQLKKEKESFRYTRPVLQSTLQLMGCKARHA 47

[Close]
BLAST of Lag0012722 vs. NCBI nr
Match: KAA0035239.1 (P-loop NTPase domain-containing protein LPA1-like protein 1-like [Cucumis melo var. makuwa] >TYK22394.1 P-loop NTPase domain-containing protein LPA1-like protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 39 MVEVAKMLYIVVLDYEEQEKKEKESFRYTRAVLQSTLQLMGSAAAKA 86
          M +VAK+LY+V+LDYEEQ KKEKESFRYTR VLQSTLQLMG  A  A
Sbjct: 1  MADVAKVLYVVILDYEEQLKKEKESFRYTRPVLQSTLQLMGCKARHA 47

[Close]
BLAST of Lag0012722 vs. NCBI nr
Match: XP_008465362.1 (PREDICTED: P-loop NTPase domain-containing protein LPA1 homolog 1-like [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 39 MVEVAKMLYIVVLDYEEQEKKEKESFRYTRAVLQSTLQLMGSAAAKA 86
          M +VAK+LY+V+LDYEEQ KKEKESFRYTR VLQSTLQLMG  A  A
Sbjct: 1  MADVAKVLYVVILDYEEQLKKEKESFRYTRPVLQSTLQLMGCKARHA 47

[Close]
BLAST of Lag0012722 vs. NCBI nr
Match: XP_022943378.1 (P-loop NTPase domain-containing protein LPA1 homolog 1-like [Cucurbita moschata] >XP_022943379.1 P-loop NTPase domain-containing protein LPA1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 39 MVEVAKMLYIVVLDYEEQEKKEKESFRYTRAVLQSTLQLMGSAAAKA 86
          M EVAK+LYIVVLDYEEQ KKEK SFRYTR VLQSTLQLMG  A  A
Sbjct: 1  MAEVAKVLYIVVLDYEEQVKKEKGSFRYTRPVLQSTLQLMGCKARHA 47

[Close]
BLAST of Lag0012722 vs. ExPASy Swiss-Prot
Match: Q93ZS1 (P-loop NTPase domain-containing protein LPA1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g45090 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.0e-04
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 39 MVEVAKMLYIVVLDY-EEQEKKEKESFRYTRAVLQSTLQLMGSAAAKA 86
          M E  K+LYIVV +  ++ +    +SFRYTR VLQSTLQLMG  A  A
Sbjct: 2  MTEATKVLYIVVREEGDDDDNNGDDSFRYTRPVLQSTLQLMGCKARHA 49

The following BLAST results are available for this feature:
BLAST of Lag0012722 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022140389.13.6e-0982.98P-loop NTPase domain-containing protein LPA1 homolog 1-like [Momordica charantia... [more]
XP_011657017.11.4e-0876.60P-loop NTPase domain-containing protein LPA1 homolog 1 [Cucumis sativus] >KGN468... [more]
KAA0035239.11.4e-0876.60P-loop NTPase domain-containing protein LPA1-like protein 1-like [Cucumis melo v... [more]
XP_008465362.11.4e-0876.60PREDICTED: P-loop NTPase domain-containing protein LPA1 homolog 1-like [Cucumis ... [more]
XP_022943378.11.8e-0880.85P-loop NTPase domain-containing protein LPA1 homolog 1-like [Cucurbita moschata]... [more]
BLAST of Lag0012722 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZS18.0e-0454.17P-loop NTPase domain-containing protein LPA1 homolog 2 OS=Arabidopsis thaliana O... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0012722.1Lag0012722.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane