Lag0012620 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0012620
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr1: 42723739 .. 42725313 (-)
RNA-Seq Expression	Lag0012620
Synteny	Lag0012620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGAAAGTTGAAGTTTTGAGTTGTTGGGATGAGAAAGTGCCCACTTTTCTTGTCGTTCCAGTTAAGACATCTCTATCTCCTGAATTGGAGACTATTTCGGAAGAGGATGAAGTTGAAGAAATTGTTGAGAAAGAAGGGTCCTATTTCTCTCTCTTTGAGCCATTCTAGGCATATATTTGTATATTCGAGTTCATGACCGTTGAAACTTACATGTATTATTGTTAGTTCAATTAAGTTTTACACTTCTTCGTTGGGATATTCAAGGGGAAAATACAGTTCCATATATAGTTCACCTTCACCATTTGGAATGTGCTTCTAGCTAGCTATTTGTATATTTTTTTTTGGTGACAAGTGTAAAAGATATACCACCCTTACAAGTTACACCCATAAGCAAATACTATTCCTATGTTTAACTTATTTAAGAATTACACATCTTATCCTTGTACACTTTGTGTTCAAAATATTGCTCTCAATTCTCACCAATAAATCAGCAAAATTGTTTAAAGGGTAGGAGCCTTGTTTGCAATTGATATAATTGAATTGTATAAAGTACACCTTTAGTGATGATGGATTTTTTTAATAGAGTTCAACGGCATGTTGCATGAATTGAGAGATTCAAATCTTTGACCTCTTGACTAGGAGTATATGTTCTTAACCTAATCTGCTAAATTTCTTTGGACGTTGTGTTTTTTTAGCAATGATATTTTTGAAACAATAACTTTTAGGGATATTTTTTAAACGACGACTCCAAAACCCTAAGCTACACACCAGCCCATGTCTATACACATGCTAGATATAAGCTTCCTTTGAATTTTCAATTTCTAAGTGATTTACTAACGGTAAAGGTAATTTTAAACGTATTTTTTAAAGGTGAGAGCTATTATTGAAACTTTTTAAAATTCAAAATATTATTGAAAGGAGACCCACAAAGTGTCCAAATATTTTGGAGGCAAAGGATGCAACAAAAGATGGGGAAGTGGGTGGATGAATAAATGAGAACTTACTCAAATTCCAGCTGATTCAATAAATGTATTTTACATAAAAATGAATTTGACCATATGGGTAGGACAGAACAAATTAAGTACAGTCCAAATTAAATAATATTGTTGTATATATTGGAGAGTCATTTCTTTACAATATCAATTGTCGTAAATAAGGCCAAAACAATTTTAGGCCGAAAGGGCCAATCTTTTTGGTGCTCTCCGACTAAGAAAAAAGCACCCACTTAAACACTTCCAATTTCTCTCTCTCTCTCGCTCTCAATTTTTGTATATATATATTGCTTGAGTTTTTCCCATCGTCAATACTCAGAAGGAAACAACAAGTGTTGGTATTTTCAGTGAAAGGTTTGATGTTATGGCAGATGATCAGAAGGTTAAAGTATTGAGAATTTTGATTGAGAAAGCACCAGCTCCTCTTGTTTCCGCCATTAAAGCTTCTCACTCTCCTCGATTGGAGACCATTGAAGAAGAGGATGAAGCTGATGAGAAAATTAATGAAAATGATCATCATGCCTCCAAATCCATCCTTGTTTTTTCTAATGCTTCTTGTGTTCTTCAAGTTTTTTAG

mRNA sequence

ATGGCAAAGAAAGTTGAAGTTTTGAGTTGTTGGGATGAGAAAGTGCCCACTTTTCTTGTCGTTCCAGTTAAGACATCTCTATCTCCTGAATTGGAGACTATTTCGGAAGAGGATGAAGTTGAAGAAATTGTTGAGAAAGAAGGTGAAAGGTTTGATGTTATGGCAGATGATCAGAAGGTTAAAGTATTGAGAATTTTGATTGAGAAAGCACCAGCTCCTCTTGTTTCCGCCATTAAAGCTTCTCACTCTCCTCGATTGGAGACCATTGAAGAAGAGGATGAAGCTGATGAGAAAATTAATGAAAATGATCATCATGCCTCCAAATCCATCCTTGTTTTTTCTAATGCTTCTTGTGTTCTTCAAGTTTTTTAG

Coding sequence (CDS)

ATGGCAAAGAAAGTTGAAGTTTTGAGTTGTTGGGATGAGAAAGTGCCCACTTTTCTTGTCGTTCCAGTTAAGACATCTCTATCTCCTGAATTGGAGACTATTTCGGAAGAGGATGAAGTTGAAGAAATTGTTGAGAAAGAAGGTGAAAGGTTTGATGTTATGGCAGATGATCAGAAGGTTAAAGTATTGAGAATTTTGATTGAGAAAGCACCAGCTCCTCTTGTTTCCGCCATTAAAGCTTCTCACTCTCCTCGATTGGAGACCATTGAAGAAGAGGATGAAGCTGATGAGAAAATTAATGAAAATGATCATCATGCCTCCAAATCCATCCTTGTTTTTTCTAATGCTTCTTGTGTTCTTCAAGTTTTTTAG

Protein sequence

MAKKVEVLSCWDEKVPTFLVVPVKTSLSPELETISEEDEVEEIVEKEGERFDVMADDQKVKVLRILIEKAPAPLVSAIKASHSPRLETIEEEDEADEKINENDHHASKSILVFSNASCVLQVF

Homology

The following BLAST results are available for this feature:

BLAST of Lag0012620 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0012620 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36063	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16	coord: 1..46 coord: 59..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0012620.1	Lag0012620.1	mRNA