Lag0012451 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0012451
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr1: 41183483 .. 41185829 (-)
RNA-Seq ExpressionLag0012451
SyntenyLag0012451
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCCCAGTTTCACCTGGTTCAGCCCGAAACGCCTCTGAATGCCTTAAAACTCTAGATCAAGAGAACAAGTATTTAAACCATCCTTCATCACTGAAGAAGGGATCCCAAACTCTATTCTCTACTCTTCCCTCTTGCTCTCTTGCTCTCCTATTTCTGCTTTATGACTTAAGCATCGGACGCGGTGTGCAGGTTTTCTGTCTTGCAAGCCACGTCTTCCCCTCACCAACAAATTTACCGCTAGTGGCACGTGAAGGTCAGGTGAGTTCCTCCCGACCAAATTTGACCATCAACAGTTTGTGTCGATGATCAAATTATGACACTAAGGACATGATTTGTTTCTAATTGATCTACCTATAATTGATTTTGAATGATTTATGGCATGTTCGTTTGTGAGTGACTTTAGAATAAATGTTTTAAGTCTGAGGGATTTGAGTATAATTATTTTTGTAAAATTATTCAATTATAAATTATTTTAATACTTGGTTCCAAACTCGTAGAAAAGATTTTGATTTAATTAAGCTAATAAATGATTGATGTTTGTGTTTCAAAAGTGATTGTAAAATCATCAGATTACTAAAATGAACATTATATTTGAGAAAGAAAAAAAACATTAGAGGGAGGTAAACAAAAGTTATAAATTGAGGAAAAAGATTTGGAGGGAAATAAAAATTTAAAAAGAAAAATTGAGAGTCAAAGAAAAGTTTCGTAGAAGAAAAAGGTTGGACAAAAACTTTAGGTACGAAAACAAAAATGATAGAAGAGAAAACTTTTTTAATAGAGATAATGAAATTTGAAAAGATGAGAAATAAAGTTAGAGAGATATAAAAATTTTTGAAAATAAAGGCTAGAGGGAGGGAAAATTTTTTAGAGGAAAAAAGTAAGCAAAAAAATAAAAGGTAAAAAATTAGAGAAAATAATTTAGAGACACAATAATTGTAAAGAGAAAAAGAAAATAGAGGAACAAAATTTTTAAAGATAAACAAGTTAGAGAGATTTTAAAAACACAGAAAAGAGTTAGAAAAAGATACTATAAAAAATTTAGATTTTTAAAATAAAGTGAAATACGAAGATATATAAATTTTAATTTAAAAAATAATTATTTTAAAAACAAAATATATTTTGCAACCACTCGTAAAAAATCACTTGAGAACTGATTCTCAAGTGATTGATCCAAAATCACTTGATTAATACATATATTCATACCGGCTCGAAGTCTTAACACATGTTTATTAGACAAAATTGTGTCTAATTTGTAACCATGCTAATTGTTAAAAAAAAAAAAAAAAAAGAATATTTTATGGCAACCTTTTTTTGTTAGTTTCTGTTTTATTACGACTTAATATTTAAAATAAATCCTTTGTTATCTTTCATAATTTCACATCTTGCATATAATAATCTGGGCACAACAACACTAATTAATAAAACTCACTAAATTGTGAGAGGAAGATATGGATTCTATTAAACAAGTGCCTATTAATATGTCTACCAGTGATAAATTCATGTGGTATTACGGAAAATATGGCAACTATACAGTGAAAAGTGGATACAAGGTCTTCATCAAGAACAAAATAACAGCGAACTCAAGTACCAATTCTATGGAGAAAGTCTGGAAGAATCTATGGAGTTTGAAGACCCCAGCAAAAGTAAAACACTTTTGTTGGAGGGCCATCCATGATTTCATTCCTGCTCATGCGAATCTGGCTAAAAGCGATGTATTCATCTGAATTTAATGTGTCCCAGATGCAATAGGGAGATTGAAACTACTGATTATAGTTTAATAACATGTGAGAAAGTTCGGGATATTTGGGATCTTACCTTCTCCCATGCTCTGTTAAGAGAGGATTTCAATCACAGCTTCGCTGATAAATGGTTCGAGCTGAACTCAGTCCTCCCCATGGAGCAGTTGAAGTTGGTTGTTATGACCTGTTGGGCAAATTGGTAAGATAGAAATGATCTTGTGCATAATAAGTCGATTCCTCCTCCAACGCTCCATAGCAATTGGATTAAAAAATACTTATCTGATTATCCCCAAGTGAATGGTCCTTCGTCTGATAATTCGATAGTTCCAAACAATGGCAGAGCTCATCCTGTTCAGTGGTCTCCCCCTCCGATTGATTTTTGGAAGGTCAGTGTGGATGCTGCTTGGAAAGATGGCGATCCTTGCACTGGATTGGGTCTAGTCTGTAGGAATCATAATGGAGATCTCATGGGAGCTTTATCTATTCTTTCTGAGTTATCCTTCCCTCCTCCTATGGACGAATTAGTGGCCATTTTGGAGGGTTTAAAGCTTGCTGAACTTCTAGGGCATAATCAGATAATTGTGGAATCAAATTGTATCTAG

mRNA sequence

ATGGCCGCCCCAGTTTCACCTGGTTCAGCCCGAAACGCCTCTGAATGCCTTAAAACTCTAGATCAAGAGAACAAGTATTTAAACCATCCTTCATCACTGAAGAAGGGATCCCAAACTCTATTCTCTACTCTTCCCTCTTGCTCTCTTGCTCTCCTATTTCTGCTTTATGACTTAAGCATCGGACGCGGTGTGCAGGTTTTCTGTCTTGCAAGCCACGTCTTCCCCTCACCAACAAATTTACCGCTAGTGGCACGTGAAGATAGAAATGATCTTGTGCATAATAAGTCGATTCCTCCTCCAACGCTCCATAGCAATTGGATTAAAAAATACTTATCTGATTATCCCCAAGTGAATGGTCCTTCGTCTGATAATTCGATAGTTCCAAACAATGGCAGAGCTCATCCTGTTCAGTGGTCTCCCCCTCCGATTGATTTTTGGAAGGTCAGTGTGGATGCTGCTTGGAAAGATGGCGATCCTTGCACTGGATTGGGTCTAGTCTGTAGGAATCATAATGGAGATCTCATGGGAGCTTTATCTATTCTTTCTGAGTTATCCTTCCCTCCTCCTATGGACGAATTAGTGGCCATTTTGGAGGGTTTAAAGCTTGCTGAACTTCTAGGGCATAATCAGATAATTGTGGAATCAAATTGTATCTAG

Coding sequence (CDS)

ATGGCCGCCCCAGTTTCACCTGGTTCAGCCCGAAACGCCTCTGAATGCCTTAAAACTCTAGATCAAGAGAACAAGTATTTAAACCATCCTTCATCACTGAAGAAGGGATCCCAAACTCTATTCTCTACTCTTCCCTCTTGCTCTCTTGCTCTCCTATTTCTGCTTTATGACTTAAGCATCGGACGCGGTGTGCAGGTTTTCTGTCTTGCAAGCCACGTCTTCCCCTCACCAACAAATTTACCGCTAGTGGCACGTGAAGATAGAAATGATCTTGTGCATAATAAGTCGATTCCTCCTCCAACGCTCCATAGCAATTGGATTAAAAAATACTTATCTGATTATCCCCAAGTGAATGGTCCTTCGTCTGATAATTCGATAGTTCCAAACAATGGCAGAGCTCATCCTGTTCAGTGGTCTCCCCCTCCGATTGATTTTTGGAAGGTCAGTGTGGATGCTGCTTGGAAAGATGGCGATCCTTGCACTGGATTGGGTCTAGTCTGTAGGAATCATAATGGAGATCTCATGGGAGCTTTATCTATTCTTTCTGAGTTATCCTTCCCTCCTCCTATGGACGAATTAGTGGCCATTTTGGAGGGTTTAAAGCTTGCTGAACTTCTAGGGCATAATCAGATAATTGTGGAATCAAATTGTATCTAG

Protein sequence

MAAPVSPGSARNASECLKTLDQENKYLNHPSSLKKGSQTLFSTLPSCSLALLFLLYDLSIGRGVQVFCLASHVFPSPTNLPLVAREDRNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHPVQWSPPPIDFWKVSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAELLGHNQIIVESNCI
Homology
BLAST of Lag0012451 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 6.8e-12
Identity = 48/133 (36.09%), Postives = 65/133 (48.87%), Query Frame = 0

Query: 87  DRNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHP--VQWSPPPID 146
           DRN   H  S+  P L  NWI  Y  +Y Q      +  I P      P   +W PP   
Sbjct: 65  DRNSXAHGSSVSTPALRCNWISSYFQNYSQA---QENKRISPQQSSVPPPSCRWLPPRDS 124

Query: 147 FWKVSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAE 206
             KV+ DAA +     TGLGL+ R+H G L+ A S+   +   P   E+  ILE LKLA 
Sbjct: 125 AMKVNSDAACR--STSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEALKLAA 184

Query: 207 LLGHNQIIVESNC 218
              + +++VES+C
Sbjct: 185 SRSYTRLVVESDC 192

BLAST of Lag0012451 vs. NCBI nr
Match: XP_010667704.1 (PREDICTED: uncharacterized protein LOC104884717 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-09
Identity = 35/85 (41.18%), Postives = 58/85 (68.24%), Query Frame = 0

Query: 134  HPVQWSPPPIDFWKVSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDEL 193
            H V W+ P  D+ K++VDA  + G+ C+GLG VCR+  G ++G LS+ S +++   + E 
Sbjct: 1415 HQVSWTAPKADWVKINVDAG-QVGEFCSGLGAVCRDEGGVVLGCLSVQSLVAWELRIAEA 1474

Query: 194  VAILEGLKLAELLGHNQIIVESNCI 219
             A LEG+K+A   G++Q+I+ES+C+
Sbjct: 1475 KAALEGIKMAIRGGYSQVIIESDCL 1498

BLAST of Lag0012451 vs. NCBI nr
Match: TXG72479.1 (hypothetical protein EZV62_001058 [Acer yangbiense])

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-08
Identity = 39/131 (29.77%), Postives = 72/131 (54.96%), Query Frame = 0

Query: 88  RNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHPVQWSPPPIDFWK 147
           RN  +H+K + P +   +W   ++ D+   N   +   +V     + P +WSPP +  +K
Sbjct: 9   RNRFLHHKEVFPVSDIWDWANVFIDDFRVANFVETKKQLVV----SPPPKWSPPHVGCFK 68

Query: 148 VSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAELLG 207
           ++ DAA +D D  +G+G V R+ +G +  +L    ++ +PP + E +AIL G +LA  LG
Sbjct: 69  INSDAATRDRDGRSGVGCVIRDSDGYVRASLCQGFDVCYPPQVAETLAILHGCRLAAELG 128

Query: 208 HNQIIVESNCI 219
               ++ES+ +
Sbjct: 129 LLPTVLESDAL 135

BLAST of Lag0012451 vs. NCBI nr
Match: XP_030924777.1 (uncharacterized protein LOC115951770 [Quercus lobata])

HSP 1 Score: 70.1 bits (170), Expect = 2.7e-08
Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 0

Query: 87  DRNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHPVQWSPPPIDFW 146
           +RN ++HN+S  PP L  ++ K  + ++ +    +S     P     H   W+ PP+ F 
Sbjct: 196 NRNKIIHNESGLPPGLIWDFAKNIVEEFEE----ASTWDYTPLLSPLH--SWATPPLGFA 255

Query: 147 KVSVDAAWK-DGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAEL 206
           KV+VD A   DG   +G+G++ R+ +G ++ ALS      FP    E +A+ +G+ LA+ 
Sbjct: 256 KVNVDGACSIDGSGISGVGVIIRDESGGVIAALSKALPSHFPAEWTEFIALEQGILLAQE 315

Query: 207 LGHNQIIVESN 217
           L    +I ESN
Sbjct: 316 LNLTHVIFESN 320

BLAST of Lag0012451 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 7.8e-08
Identity = 41/117 (35.04%), Postives = 60/117 (51.28%), Query Frame = 0

Query: 87  DRNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIV----PNNGRAHPVQWSPPP 146
           DRN +   + IP   + S+WI  Y+ D+   + PS  +  +     +N R     WSPPP
Sbjct: 98  DRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASSNDRTIENYWSPPP 157

Query: 147 IDFWKVSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEG 200
             + K++VDAA K     TG+G+VCRN  G       IL+  S  P M E +A+ +G
Sbjct: 158 AGWIKINVDAACKKHQFRTGIGIVCRNEKG------QILAAASHDPLMAESLALFDG 208

BLAST of Lag0012451 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.3e-12
Identity = 48/133 (36.09%), Postives = 65/133 (48.87%), Query Frame = 0

Query: 87  DRNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHP--VQWSPPPID 146
           DRN   H  S+  P L  NWI  Y  +Y Q      +  I P      P   +W PP   
Sbjct: 65  DRNSXAHGSSVSTPALRCNWISSYFQNYSQA---QENKRISPQQSSVPPPSCRWLPPRDS 124

Query: 147 FWKVSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAE 206
             KV+ DAA +     TGLGL+ R+H G L+ A S+   +   P   E+  ILE LKLA 
Sbjct: 125 AMKVNSDAACR--STSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEALKLAA 184

Query: 207 LLGHNQIIVESNC 218
              + +++VES+C
Sbjct: 185 SRSYTRLVVESDC 192

BLAST of Lag0012451 vs. ExPASy TrEMBL
Match: A0A5C7ITL2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.9e-09
Identity = 39/131 (29.77%), Postives = 72/131 (54.96%), Query Frame = 0

Query: 88  RNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHPVQWSPPPIDFWK 147
           RN  +H+K + P +   +W   ++ D+   N   +   +V     + P +WSPP +  +K
Sbjct: 9   RNRFLHHKEVFPVSDIWDWANVFIDDFRVANFVETKKQLVV----SPPPKWSPPHVGCFK 68

Query: 148 VSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAELLG 207
           ++ DAA +D D  +G+G V R+ +G +  +L    ++ +PP + E +AIL G +LA  LG
Sbjct: 69  INSDAATRDRDGRSGVGCVIRDSDGYVRASLCQGFDVCYPPQVAETLAILHGCRLAAELG 128

Query: 208 HNQIIVESNCI 219
               ++ES+ +
Sbjct: 129 LLPTVLESDAL 135

BLAST of Lag0012451 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-08
Identity = 41/117 (35.04%), Postives = 60/117 (51.28%), Query Frame = 0

Query: 87  DRNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIV----PNNGRAHPVQWSPPP 146
           DRN +   + IP   + S+WI  Y+ D+   + PS  +  +     +N R     WSPPP
Sbjct: 98  DRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASSNDRTIENYWSPPP 157

Query: 147 IDFWKVSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEG 200
             + K++VDAA K     TG+G+VCRN  G       IL+  S  P M E +A+ +G
Sbjct: 158 AGWIKINVDAACKKHQFRTGIGIVCRNEKG------QILAAASHDPLMAESLALFDG 208

BLAST of Lag0012451 vs. ExPASy TrEMBL
Match: A0A5C7GUI2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027554 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.5e-08
Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = 0

Query: 88  RNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHPVQWSPPPIDFWK 147
           RN  VH+  IP       W   YL DY      + DN  +       P +W PP    +K
Sbjct: 17  RNQFVHSNEIPNDIEVLEWAWSYLHDYRVAF--ARDNPKLTK--EREPPKWKPPDRGVFK 76

Query: 148 VSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAELLG 207
           ++ DAA  + D   G+ +V RN+ G +M +L  + + S+ P + E +AIL+G+ LA  LG
Sbjct: 77  INTDAALNENDFQFGISVVIRNYQGHVMASLCQIIKASYQPQIIEAMAILKGIWLAVSLG 136

Query: 208 HNQIIVESNCI 219
                +E N +
Sbjct: 137 LLPASLELNAL 143

BLAST of Lag0012451 vs. ExPASy TrEMBL
Match: A0A6P9EAW2 (uncharacterized protein LOC118344571 OS=Juglans regia OX=51240 GN=LOC118344571 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.2e-07
Identity = 37/131 (28.24%), Postives = 58/131 (44.27%), Query Frame = 0

Query: 88  RNDLVHNKSIPPPTLHSNWIKKYLSDYPQVNGPSSDNSIVPNNGRAHPVQWSPPPIDFWK 147
           RN+ V  +    P   ++  K  +SD   +      NS          V WSPPP+  WK
Sbjct: 10  RNEFVFKQEFKSP---NSLAKLVISDLRDMRNMQMKNSTRDQRLHNQNVNWSPPPLHVWK 69

Query: 148 VSVDAAWKDGDPCTGLGLVCRNHNGDLMGALSILSELSFPPPMDELVAILEGLKLAELLG 207
           ++ DAA        G+G++ RNH G ++    +   L   P + E +  LE  +L   LG
Sbjct: 70  INWDAAVDKAKCKVGIGIIVRNHTGSVVATSRLNRPLYPDPALAEAIGALEAARLCHHLG 129

Query: 208 HNQIIVESNCI 219
              II+E + +
Sbjct: 130 LTNIILEGDAL 137

BLAST of Lag0012451 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.6e-05
Identity = 32/95 (33.68%), Postives = 47/95 (49.47%), Query Frame = 0

Query: 128 PNNGRAHPVQWSPPPIDFWKVSVDAAWKDGDPCTGLGLVCRNHNGDL--MGALSILSELS 187
           P   R   VQW  PP  + K + DA W+  +P  G+G + RN +G +  MGA ++     
Sbjct: 127 PQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARAL----- 186

Query: 188 FPPPMDELVAILEGLKLAEL----LGHNQIIVESN 217
            P   + L A LE L+ A L      + +II ES+
Sbjct: 187 -PRTKNVLEAELEALRWAVLTMSRFNYKRIIFESD 215

BLAST of Lag0012451 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.3e-04
Identity = 30/95 (31.58%), Postives = 45/95 (47.37%), Query Frame = 0

Query: 128 PNNGRAHPVQWSPPPIDFWKVSVDAAWKDGDPCTGLGLVCRNHNGDL--MGALSILSELS 187
           P   R+   +W PPP  + K + DA W   +   G+G V RN  G++  MGA ++     
Sbjct: 410 PQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARAL----- 469

Query: 188 FPPPMDELVAILEGLKLAEL----LGHNQIIVESN 217
            P     L A LE ++ A L      +N +I ES+
Sbjct: 470 -PKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESD 498

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131661.16.8e-1236.09uncharacterized protein LOC111004786 [Momordica charantia][more]
XP_010667704.12.4e-0941.18PREDICTED: uncharacterized protein LOC104884717 [Beta vulgaris subsp. vulgaris][more]
TXG72479.11.2e-0829.77hypothetical protein EZV62_001058 [Acer yangbiense][more]
XP_030924777.12.7e-0832.06uncharacterized protein LOC115951770 [Quercus lobata][more]
XP_022145060.17.8e-0835.04uncharacterized protein LOC111014578 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BQ493.3e-1236.09uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A5C7ITL25.9e-0929.77RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 ... [more]
A0A6J1CTE33.8e-0835.04uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A5C7GUI28.5e-0832.06RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027554 ... [more]
A0A6P9EAW24.2e-0728.24uncharacterized protein LOC118344571 OS=Juglans regia OX=51240 GN=LOC118344571 P... [more]
Match NameE-valueIdentityDescription
AT2G34320.16.6e-0533.68Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT4G29090.14.3e-0431.58Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 150..217
e-value: 2.4E-8
score: 33.8
NoneNo IPR availablePANTHERPTHR47074:SF17PUTATIVE-RELATEDcoord: 135..217
NoneNo IPR availablePANTHERPTHR47074BNAC02G40300D PROTEINcoord: 135..217
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 150..217
e-value: 6.10647E-10
score: 53.0868

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0012451.1Lag0012451.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity