Lag0012387 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTACTCCTTCCAAGGTCGACATCCGCCAGCGAAGCTTGCTGCTATGGCTGCGTCCTCTACGTCGAACAATTTTGCCTCTGGTGTTGGGAGTGTTGGATGTTCGAACAGTGCATTTCCTCAAGATTCTCAAGTCTGGTTGTCTGATACCGGCTGCAACGCTCACCTGGCAAGTGATCTGGCTAATCTCAGCATCTCCAATGCCTACAATGGAGAAGAAAATATTACAGTGGGTAATGGTCATTCTCTTCCTATATCTCATTCTGGTTCTAGCCGAATCTCTCTAGCTGATAACACTTTTACCTTGTCAAACCTTCTTCGAGTTTCCAATATTGATACTAATCTTCTCTCAGTTCACCAATTCTGTTTAGATAACAACTGTTCCTTTATTTTTTATGCCTCTTCCTTCACGATTCAGGACAAAACTACGGGCAAACCTCTGTTCCAAGGCCTAGCGTGAACGGCCTCTACCCTATCTCTGCCTCGTCCATGTCTACTGCACAAGTAAGCCTTACTGCTAATGTAGGTACCAAGAATTCATACAGTGTGTGGCACGATAGGTTAGGTCATCCATCTACTTCTGTTCTTCAACACCTGTTAAACTCGATTGATTGTTCTGTTTCTAAACATACTTTGCTTATCGGTAAGCATTGCCTTGATGGAAAAATGGCCAAATGGCCAAATTACCCTTTCCCTTATCTACTACTTCTACTGTTGCACCATTAG ATGAACTACTCCTTCCAAGGTCGACATCCGCCAGCGAAGCTTGCTGCTATGGCTGCGTCCTCTACGTCGAACAATTTTGCCTCTGGTGTTGGGAGTGTTGGATGTTCGAACAGTGCATTTCCTCAAGATTCTCAAGTCTGGTTGTCTGATACCGGCTGCAACGCTCACCTGGCAAGTGATCTGGCTAATCTCAGCATCTCCAATGCCTACAATGGAGAAGAAAATATTACAGTGGGACAAAACTACGGGCAAACCTCTGTTCCAAGGCCTAGCGTGAACGGCCTCTACCCTATCTCTGCCTCGTCCATGTCTACTGCACAAGTAAGCCTTACTGCTAATGTAGGTACCAAGAATTCATACAGTGTGTGGCACGATAGGTTAGGTCATCCATCTACTTCTGTTCTTCAACACCTGTTAAACTCGATTGATTGTTCTGTTTCTAAACATACTTTGCTTATCGGTAAGCATTGCCTTGATGGAAAAATGGCCAAATGGCCAAATTACCCTTTCCCTTATCTACTACTTCTACTGTTGCACCATTAG ATGAACTACTCCTTCCAAGGTCGACATCCGCCAGCGAAGCTTGCTGCTATGGCTGCGTCCTCTACGTCGAACAATTTTGCCTCTGGTGTTGGGAGTGTTGGATGTTCGAACAGTGCATTTCCTCAAGATTCTCAAGTCTGGTTGTCTGATACCGGCTGCAACGCTCACCTGGCAAGTGATCTGGCTAATCTCAGCATCTCCAATGCCTACAATGGAGAAGAAAATATTACAGTGGGACAAAACTACGGGCAAACCTCTGTTCCAAGGCCTAGCGTGAACGGCCTCTACCCTATCTCTGCCTCGTCCATGTCTACTGCACAAGTAAGCCTTACTGCTAATGTAGGTACCAAGAATTCATACAGTGTGTGGCACGATAGGTTAGGTCATCCATCTACTTCTGTTCTTCAACACCTGTTAAACTCGATTGATTGTTCTGTTTCTAAACATACTTTGCTTATCGGTAAGCATTGCCTTGATGGAAAAATGGCCAAATGGCCAAATTACCCTTTCCCTTATCTACTACTTCTACTGTTGCACCATTAG MNYSFQGRHPPAKLAAMAASSTSNNFASGVGSVGCSNSAFPQDSQVWLSDTGCNAHLASDLANLSISNAYNGEENITVGQNYGQTSVPRPSVNGLYPISASSMSTAQVSLTANVGTKNSYSVWHDRLGHPSTSVLQHLLNSIDCSVSKHTLLIGKHCLDGKMAKWPNYPFPYLLLLLLHH Homology
BLAST of Lag0012387 vs. NCBI nr
Match: RVW31473.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-14 Identity = 58/149 (38.93%), Postives = 82/149 (55.03%), Query Frame = 0
BLAST of Lag0012387 vs. NCBI nr
Match: RVW58434.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 90.1 bits (222), Expect = 2.1e-14 Identity = 60/180 (33.33%), Postives = 85/180 (47.22%), Query Frame = 0
BLAST of Lag0012387 vs. NCBI nr
Match: XP_022147875.1 (mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1 [Momordica charantia]) HSP 1 Score: 89.7 bits (221), Expect = 2.7e-14 Identity = 60/145 (41.38%), Postives = 77/145 (53.10%), Query Frame = 0
BLAST of Lag0012387 vs. NCBI nr
Match: KAA8548185.1 (hypothetical protein F0562_004554 [Nyssa sinensis]) HSP 1 Score: 89.4 bits (220), Expect = 3.5e-14 Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = 0
BLAST of Lag0012387 vs. NCBI nr
Match: RVW82846.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 89.0 bits (219), Expect = 4.6e-14 Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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