Lag0012216 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0012216
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr1: 38726086 .. 38727578 (+)
RNA-Seq ExpressionLag0012216
SyntenyLag0012216
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGCTTATGGAAGGGATGCAAGTTCCTCTCCTCTAAATCTCTCTCTGCATTTGAAATTCTTCAATTCCTCTCATTCTCTTCATCTCTTCAAATCAAATCACTCTCTCCCTCCGCCGCTTCCGAATCTCTCCGCCTCTCTCCGTCGCCGCCACTCTTGATCTCTCAGGTAATCAAATTCGCCGCCACCCACAAAACCACCCATCAAATTCGCTCTTCCATCATCACCTCCGGCTTACTCCTCAACGCCACCACCAATTTCATCCTTCTCTGCGACACATTGCTCCATTGCTACCCTCTCTACGAGCCCCTTCGCCGTTTTCCTCACGTTCCCCCCTCCTACGACACTTTCGCCTACTCCTTCCTCCTCCATTCTTGCGCCGATTTGGAGCTCGCCGGCCCTGGCCTTCAACTTCACGCTCTCACTCTCAAGGTGGGCTTTCGTTCCCATGTTTATGTTCAGACTGCAATTGTGCGTATGTATGCAGCTTCTGGGTTTTTGCTTGATGCTCTGAAGGTGTTCGACGAAATGCCTGACAGAAGTTCTGTCACTTGGAATGTGTTGATTACTGGTTTGGTTAAGTGGGGTGAGCTTGAACGGGCTCGTGATGTTTTTGATCAGATGCCGACGCGGAATGTTGTGTCGTGGACTGCTATAATTGATGGGTATACTCGTCTAAATAGGCATGAAGAAGCTGCGGGTTTGTTTTGGAGAATGGTTGCTCATTATGGTATGGAGCCTACTGAAATAACACTTCTAACTATTTTCCCTTCCATTTCGAATCTTGGGGCTCTTAAGATTTGTCAATCTGTCCATGCTTATGCAGAGAAGAAAGGGTTTAAGGTGCCTGATGTGCGCATAGCTAATTCATTGATTGATTGTTATGCGAAATGTGGTTGTATTAATAGTGCGTCAAGGGTGTTTGAAGAAATGTCAGCTGAAAGAAAGAATCTGGTGTCTTGGACGTCGATAATCTCAGGATTCACGATGCATGGAATGGGAAAGAAGCTATGGAGAGTTTTGAAATGATGGAGAAGGAAGGCCACGTGCCCAACCGGGTCACATTCTTGAGCATTTTAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTTGAGTTCTTCGAAAAGATGGTTGTTGAGTATCGAATTGGGCCGGATATAATGCACTATGGGAGTTTAATAGACATGTTGGGAAGGGCAGGGAGGTTAGAAGAAGCTGAAAAGATAGCTTTGGAGATACCTAAGGAGATTGCCAATGTTGTTATTTGGAGGACACTTTTAGGAGCCTGTAGTTTTCATGGTAATGTATCGATTGCGGAGAGGGTAACGCGGAGGATATTAGAAATGGAGGGAGCATATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCTGCTGGAAAATATGGAGATGCAGAGAAATGGAGAAGATTGATGGATTACAGCAATTCCTCCAAAGTTCCAGGACAGAGCCTTGTCTAA

mRNA sequence

ATGCAGAGCTTATGGAAGGGATGCAAGTTCCTCTCCTCTAAATCTCTCTCTGCATTTGAAATTCTTCAATTCCTCTCATTCTCTTCATCTCTTCAAATCAAATCACTCTCTCCCTCCGCCGCTTCCGAATCTCTCCGCCTCTCTCCGTCGCCGCCACTCTTGATCTCTCAGGTAATCAAATTCGCCGCCACCCACAAAACCACCCATCAAATTCGCTCTTCCATCATCACCTCCGGCTTACTCCTCAACGCCACCACCAATTTCATCCTTCTCTGCGACACATTGCTCCATTGCTACCCTCTCTACGAGCCCCTTCGCCGTTTTCCTCACGTTCCCCCCTCCTACGACACTTTCGCCTACTCCTTCCTCCTCCATTCTTGCGCCGATTTGGAGCTCGCCGGCCCTGGCCTTCAACTTCACGCTCTCACTCTCAAGGTGGGCTTTCGTTCCCATGTTTATGTTCAGACTGCAATTGTGCGTATGTATGCAGCTTCTGGGTTTTTGCTTGATGCTCTGAAGGTGTTCGACGAAATGCCTGACAGAAGTTCTGTCACTTGGAATGTGTTGATTACTGGTTTGGTTAAGTGGGGTGAGCTTGAACGGGCTCGTGATGTTTTTGATCAGATGCCGACGCGGAATGTTGTGTCGTGGACTGCTATAATTGATGGGTATACTCGTCTAAATAGGCATGAAGAAGCTGCGGGTTTGTTTTGGAGAATGGTTGCTCATTATGGTATGGAGCCTACTGAAATAACACTTCTAACTATTTTCCCTTCCATTTCGAATCTTGGGGCTCTTAAGATTTGTCAATCTGTCCATGCTTATGCAGAGAAGAAAGGGTTTAAGGTGCCTGATGTGCGCATAGCTAATTCATTGATTGATTGTTATGCGAAATGTGGTTGTATTAATAGTGCGTCAAGGGTGTTTGAAGAAATGATTCACGATGCATGGAATGGGAAAGAAGCTATGGAGAGTTTTGAAATGATGGAGAAGGAAGGCCACGTGCCCAACCGGGTCACATTCTTGAGCATTTTAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTTGAGTTCTTCGAAAAGATGGTTGTTGAGTATCGAATTGGGCCGGATATAATGCACTATGGGAGTTTAATAGACATGTTGGGAAGGGCAGGGAGGTTAGAAGAAGCTGAAAAGATAGCTTTGGAGATACCTAAGGAGATTGCCAATGTTGTTATTTGGAGGACACTTTTAGGAGCCTGTAGTTTTCATGGTAATGTATCGATTGCGGAGAGGGTAACGCGGAGGATATTAGAAATGGAGGGAGCATATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCTGCTGGAAAATATGGAGATGCAGAGAAATGGAGAAGATTGATGGATTACAGCAATTCCTCCAAAGTTCCAGGACAGAGCCTTGTCTAA

Coding sequence (CDS)

ATGCAGAGCTTATGGAAGGGATGCAAGTTCCTCTCCTCTAAATCTCTCTCTGCATTTGAAATTCTTCAATTCCTCTCATTCTCTTCATCTCTTCAAATCAAATCACTCTCTCCCTCCGCCGCTTCCGAATCTCTCCGCCTCTCTCCGTCGCCGCCACTCTTGATCTCTCAGGTAATCAAATTCGCCGCCACCCACAAAACCACCCATCAAATTCGCTCTTCCATCATCACCTCCGGCTTACTCCTCAACGCCACCACCAATTTCATCCTTCTCTGCGACACATTGCTCCATTGCTACCCTCTCTACGAGCCCCTTCGCCGTTTTCCTCACGTTCCCCCCTCCTACGACACTTTCGCCTACTCCTTCCTCCTCCATTCTTGCGCCGATTTGGAGCTCGCCGGCCCTGGCCTTCAACTTCACGCTCTCACTCTCAAGGTGGGCTTTCGTTCCCATGTTTATGTTCAGACTGCAATTGTGCGTATGTATGCAGCTTCTGGGTTTTTGCTTGATGCTCTGAAGGTGTTCGACGAAATGCCTGACAGAAGTTCTGTCACTTGGAATGTGTTGATTACTGGTTTGGTTAAGTGGGGTGAGCTTGAACGGGCTCGTGATGTTTTTGATCAGATGCCGACGCGGAATGTTGTGTCGTGGACTGCTATAATTGATGGGTATACTCGTCTAAATAGGCATGAAGAAGCTGCGGGTTTGTTTTGGAGAATGGTTGCTCATTATGGTATGGAGCCTACTGAAATAACACTTCTAACTATTTTCCCTTCCATTTCGAATCTTGGGGCTCTTAAGATTTGTCAATCTGTCCATGCTTATGCAGAGAAGAAAGGGTTTAAGGTGCCTGATGTGCGCATAGCTAATTCATTGATTGATTGTTATGCGAAATGTGGTTGTATTAATAGTGCGTCAAGGGTGTTTGAAGAAATGATTCACGATGCATGGAATGGGAAAGAAGCTATGGAGAGTTTTGAAATGATGGAGAAGGAAGGCCACGTGCCCAACCGGGTCACATTCTTGAGCATTTTAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTTGAGTTCTTCGAAAAGATGGTTGTTGAGTATCGAATTGGGCCGGATATAATGCACTATGGGAGTTTAATAGACATGTTGGGAAGGGCAGGGAGGTTAGAAGAAGCTGAAAAGATAGCTTTGGAGATACCTAAGGAGATTGCCAATGTTGTTATTTGGAGGACACTTTTAGGAGCCTGTAGTTTTCATGGTAATGTATCGATTGCGGAGAGGGTAACGCGGAGGATATTAGAAATGGAGGGAGCATATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCTGCTGGAAAATATGGAGATGCAGAGAAATGGAGAAGATTGATGGATTACAGCAATTCCTCCAAAGTTCCAGGACAGAGCCTTGTCTAA

Protein sequence

MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIKFAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAYSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCGCINSASRVFEEMIHDAWNGKEAMESFEMMEKEGHVPNRVTFLSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWRRLMDYSNSSKVPGQSLV
Homology
BLAST of Lag0012216 vs. NCBI nr
Match: XP_038882176.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038882177.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038882178.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 835.1 bits (2156), Expect = 3.0e-238
Identity = 423/497 (85.11%), Postives = 447/497 (89.94%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M+SLWKGCKFLSS++ SAFE LQFLSFSSSL IKS+SPSAAS SLR   SPPLLISQVIK
Sbjct: 20  MRSLWKGCKFLSSQTFSAFENLQFLSFSSSLPIKSISPSAASNSLR--RSPPLLISQVIK 79

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK T +IRS IITSGLLLNATTNFILLC+TLLHCYPLY+PLRRFPH+PP+YDTFAY
Sbjct: 80  YATTHKATQRIRSFIITSGLLLNATTNFILLCNTLLHCYPLYQPLRRFPHIPPAYDTFAY 139

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFLLHSCADLELAGPGLQLH LTLK+GF SHVYVQTAI+RMYAASGFLLDALKVFDEMPD
Sbjct: 140 SFLLHSCADLELAGPGLQLHTLTLKLGFPSHVYVQTAILRMYAASGFLLDALKVFDEMPD 199

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK GEL RAR VFDQMP RNVVSWTAIIDGYTRLNRHEEA GLFW M
Sbjct: 200 RSSVTWNVLITGLVKLGELGRARAVFDQMPIRNVVSWTAIIDGYTRLNRHEEAVGLFWTM 259

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAHYG+EPTEITLLTIFPSISNLG LKICQSVHAYAEKKGFKV D+RIANSLIDCYAKCG
Sbjct: 260 VAHYGVEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFKVSDIRIANSLIDCYAKCG 319

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CI SASRVFEEM  +  N                GKEAMESFE+M+KEGH PNRVTFLSI
Sbjct: 320 CIFSASRVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMKKEGHDPNRVTFLSI 379

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           LSACSHGGLV+EGLEFF+KMV EY+I PDIMHYGSLIDMLGRAGRLEEAEKIALEIP EI
Sbjct: 380 LSACSHGGLVKEGLEFFQKMVDEYQIEPDIMHYGSLIDMLGRAGRLEEAEKIALEIPMEI 439

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
            NVVIWRTLLGACSFHGNVSIAERVT+R+L MEGAYGGDYVLMSNIFAAAGKYGDAEKWR
Sbjct: 440 TNVVIWRTLLGACSFHGNVSIAERVTQRLLNMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 499

Query: 481 RLMDYSNSSKVPGQSLV 482
           RLMD SN SK+PG+SLV
Sbjct: 500 RLMDSSNFSKIPGESLV 514

BLAST of Lag0012216 vs. NCBI nr
Match: XP_004147552.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740359.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740360.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740361.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740362.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740363.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740364.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740365.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >KGN53956.1 hypothetical protein Csa_021565 [Cucumis sativus])

HSP 1 Score: 822.0 bits (2122), Expect = 2.7e-234
Identity = 413/497 (83.10%), Postives = 442/497 (88.93%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M SLWKGCKF S +S S  + LQFLSFSS LQIKSLSPSAAS+ LR S S   LISQVIK
Sbjct: 1   MHSLWKGCKFFSPRSSSTSQNLQFLSFSSFLQIKSLSPSAASDPLRCSSS--FLISQVIK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK T QIRS IITSGLLLNAT NFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFLLHSCADLEL GPG QLHALT K+GF SHVYVQTA++RMYAASGFLLDA+KVFDEMPD
Sbjct: 121 SFLLHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAVLRMYAASGFLLDAMKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK+GEL+RARDVFDQMP R VVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAH+GMEP E+TLLTIFP+ISNLGALK+CQSVHAYAEKKGFKV DVRIANSLIDCYAKCG
Sbjct: 241 VAHFGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVRIANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+MEKEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEFFEKMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           A+VVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ASVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           RLMD S  SK+PGQSLV
Sbjct: 481 RLMDSSKFSKIPGQSLV 495

BLAST of Lag0012216 vs. NCBI nr
Match: XP_016899586.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis melo] >KAA0060134.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 821.2 bits (2120), Expect = 4.6e-234
Identity = 414/497 (83.30%), Postives = 439/497 (88.33%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M  LWKGCKF+SS+S S F+ LQFLSFSS LQIKS SPSAAS SL  SPS   LISQV K
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS--FLISQVFK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK   QIRS II SGLLLNATTNFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFL HSCADLEL GPG QLHALT K+GF SHVYVQTAI+RMYA+SGFLLDALKVFDEMPD
Sbjct: 121 SFLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK GEL RAR+VFDQMP +NVVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKV DVR+ANSLIDCYAKCG
Sbjct: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+M KEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEFF+KMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFFKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           ANVVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ANVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           R MD SN SK+PGQSLV
Sbjct: 481 RSMDSSNFSKIPGQSLV 495

BLAST of Lag0012216 vs. NCBI nr
Match: TYK08449.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 818.9 bits (2114), Expect = 2.3e-233
Identity = 413/497 (83.10%), Postives = 438/497 (88.13%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M  LWKGCKF+SS+S S F+ LQFLSFSS LQIKS SPSAAS SL  SPS   LISQV K
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS--FLISQVFK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK   QIRS II SGLLLNATTNFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFL HSCADLEL GPG QLHALT K+GF SHVYVQTAI+RMYA+SGFLLDALKVFDEMPD
Sbjct: 121 SFLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK GEL RAR+VFDQMP +NVVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKV DVR+ANSLIDCYAKCG
Sbjct: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+M KEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEF +KMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFIKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           ANVVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ANVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           R MD SN SK+PGQSLV
Sbjct: 481 RSMDSSNFSKIPGQSLV 495

BLAST of Lag0012216 vs. NCBI nr
Match: XP_022156231.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 804.3 bits (2076), Expect = 5.8e-229
Identity = 417/498 (83.73%), Postives = 436/498 (87.55%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSF-SSSLQIKSLSPSAASESLRLSPSPPLLISQVI 60
           M SLWK  KFLSSK+ SAFE LQFLS  SSSLQIKSLSPSAASESLR SP P L+ISQVI
Sbjct: 1   MLSLWKPWKFLSSKTFSAFETLQFLSLSSSSLQIKSLSPSAASESLRRSP-PRLVISQVI 60

Query: 61  KFAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFA 120
           K+A THK   Q RS IITSGLLL+AT +FILLC+TLL CYPL+EPLRRFP  PPSYDTF 
Sbjct: 61  KYATTHKAAQQFRSFIITSGLLLHATAHFILLCNTLLRCYPLFEPLRRFPSFPPSYDTFV 120

Query: 121 YSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMP 180
           YSFLLHSCADLEL  PGLQLHALTLKVGFRSHVYVQT+IVR+YAASGFLLDALKVFDEMP
Sbjct: 121 YSFLLHSCADLELLLPGLQLHALTLKVGFRSHVYVQTSIVRLYAASGFLLDALKVFDEMP 180

Query: 181 DRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWR 240
           DRSSVTWNVLITGLVK GELERAR VFD+MP R VVSWTAIIDGYTRLNRHEEAAGLFWR
Sbjct: 181 DRSSVTWNVLITGLVKLGELERARAVFDRMPARTVVSWTAIIDGYTRLNRHEEAAGLFWR 240

Query: 241 MVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKC 300
           MVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFK  DVRI NSLIDCYAKC
Sbjct: 241 MVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKASDVRITNSLIDCYAKC 300

Query: 301 GCINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLS 360
           GCI+SAS VFEEM  +  N                G EAMESFEMMEKEGH  NRVTFLS
Sbjct: 301 GCIDSASGVFEEMSVERKNLVSWTSIISGFTMHGMGAEAMESFEMMEKEGHKANRVTFLS 360

Query: 361 ILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKE 420
           ILS CSHGGLVEEGLEFF+K+VVEY+I PDIMHYGSLIDMLGRAGRLEEAE IA EIP E
Sbjct: 361 ILSGCSHGGLVEEGLEFFKKLVVEYQIEPDIMHYGSLIDMLGRAGRLEEAEGIASEIPME 420

Query: 421 IANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKW 480
           IANVVIWRTLLGACSFHGNV +AERVTRRIL MEGAYGGDYVLMSNIFAAAGKYG+AEKW
Sbjct: 421 IANVVIWRTLLGACSFHGNVLMAERVTRRILSMEGAYGGDYVLMSNIFAAAGKYGEAEKW 480

Query: 481 RRLMDYSNSSKVPGQSLV 482
           RR+MD SNS+KVPGQSLV
Sbjct: 481 RRMMDCSNSTKVPGQSLV 497

BLAST of Lag0012216 vs. ExPASy Swiss-Prot
Match: Q680Z7 (Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E25 PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 9.5e-118
Identity = 229/460 (49.78%), Postives = 296/460 (64.35%), Query Frame = 0

Query: 60  KFAATHKTTHQIRSSIITSGLLL-------------NATTNFILLCDTLLHCYPLYEPLR 119
           K+ +  K  HQ+ S   TSG LL             N       L +T LH Y LY+ L+
Sbjct: 45  KYESNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQ 104

Query: 120 RFPHVP------PSYDTFAYSFLLHSCADLELAG--PGLQLHALTLKVGFRSHVYVQTAI 179
           R   +       P +D+F Y FLL + ++        G+ LH LTLK+GF SHVYVQTA+
Sbjct: 105 RLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTAL 164

Query: 180 VRMYAASGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWT 239
           V MY   G ++DA KVFDEMP+R+ VTWNV+ITGL   G+ E+A    ++MP R VVSWT
Sbjct: 165 VGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 224

Query: 240 AIIDGYTRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEK 299
            IIDGY R+++ +EA  LF RMVA   ++P EIT+L I P++ NLG LK+C SVHAY  K
Sbjct: 225 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK 284

Query: 300 KGFKVPDVRIANSLIDCYAKCGCINSASRVFEEMIHDAWN----------------GKEA 359
           +GF   D+R+ NSLID YAKCGCI SA + F E+ +   N                GKEA
Sbjct: 285 RGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEA 344

Query: 360 MESFEMMEKEGHVPNRVTFLSILSACSHGGLVEEG-LEFFEKMVVEYRIGPDIMHYGSLI 419
           +  F+ ME+ G  PNRVT +S+L+ACSHGGL EE  LEFF  MV EY+I PD+ HYG L+
Sbjct: 345 VSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404

Query: 420 DMLGRAGRLEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYG 479
           DML R GRLEEAEKIALEIP E    V+WR LLGACS + +  +AERVTR+++E+E ++G
Sbjct: 405 DMLRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHG 464

Query: 480 GDYVLMSNIFAAAGKYGDAEKWRRLMDYSNSSKVPGQSLV 482
           GDYVLMSNIF   G++ DA+++R+ MD    +K+PG S V
Sbjct: 465 GDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503

BLAST of Lag0012216 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.3e-74
Identity = 155/415 (37.35%), Postives = 245/415 (59.04%), Query Frame = 0

Query: 81  LLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAYSFLLHSCADLELAGPGLQLH 140
           ++ A T+  L CD +     +Y+ L R     P  D F + F+  SCA L     G Q+H
Sbjct: 79  IIRAYTHNSLYCDVI----RIYKQLLRKSFELP--DRFTFPFMFKSCASLGSCYLGKQVH 138

Query: 141 ALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELE 200
               K G R HV  + A++ MY     L+DA KVFDEM +R  ++WN L++G  + G+++
Sbjct: 139 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 198

Query: 201 RARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSI 260
           +A+ +F  M  + +VSWTA+I GYT +  + EA   F+R +   G+EP EI+L+++ PS 
Sbjct: 199 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD-FFREMQLAGIEPDEISLISVLPSC 258

Query: 261 SNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCGCINSASRVFEEMIHD---AW 320
           + LG+L++ + +H YAE++GF +    + N+LI+ Y+KCG I+ A ++F +M      +W
Sbjct: 259 AQLGSLELGKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 318

Query: 321 -----------NGKEAMESFEMMEKEGHVPNRVTFLSILSACSHGGLVEEGLEFFEKMVV 380
                      N   A+E+F  M++    PN +TFL +LSACSH G+ +EGL +F+ M  
Sbjct: 319 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 378

Query: 381 EYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIA 440
           +Y+I P I HYG LID+L RAG+LE A +I   +P +  +  IW +LL +C   GN+ +A
Sbjct: 379 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGSLLSSCRTPGNLDVA 438

Query: 441 ERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWRRLMDYSNSSKVPGQSLV 482
                 ++E+E    G+YVL++NI+A  GK+ D  + R+++   N  K PG SL+
Sbjct: 439 LVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484

BLAST of Lag0012216 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.2e-73
Identity = 147/390 (37.69%), Postives = 226/390 (57.95%), Query Frame = 0

Query: 105 LRRFPHVPPSYDTFAYSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAA 164
           L  F  + PS+ TF  +F+  + A    A P   LH+   + GF S  +  T ++  YA 
Sbjct: 72  LLSFDGLRPSHHTF--NFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAK 131

Query: 165 SGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGY 224
            G L  A +VFDEM  R    WN +ITG  + G+++ A ++FD MP +NV SWT +I G+
Sbjct: 132 LGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGF 191

Query: 225 TRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVP 284
           ++   + EA  +F  M     ++P  IT++++ P+ +NLG L+I + +  YA + GF   
Sbjct: 192 SQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF-FD 251

Query: 285 DVRIANSLIDCYAKCGCINSASRVFEEMIHD----AWN---------GK--EAMESFEMM 344
           ++ + N+ I+ Y+KCG I+ A R+FEE+ +     +WN         GK  EA+  F  M
Sbjct: 252 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 311

Query: 345 EKEGHVPNRVTFLSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGR 404
            +EG  P+ VTF+ +L AC HGG+V +G E F+ M   ++I P + HYG +ID+LGR G+
Sbjct: 312 LREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGK 371

Query: 405 LEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSN 464
           L+EA  +   +P +  + V+W TLLGACSFHGNV IAE  +  + ++E    G+ V+MSN
Sbjct: 372 LQEAYDLIKTMPMK-PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSN 431

Query: 465 IFAAAGKYGDAEKWRRLMDYSNSSKVPGQS 480
           I+AA  K+    + R+LM     +K  G S
Sbjct: 432 IYAANEKWDGVLRMRKLMKKETMTKAAGYS 457

BLAST of Lag0012216 vs. ExPASy Swiss-Prot
Match: Q9MA50 (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.8e-71
Identity = 154/389 (39.59%), Postives = 228/389 (58.61%), Query Frame = 0

Query: 111 VPPSYDTFAYSFLLHSCADLELAGPGL--QLHALTLKVGF-RSHVYVQTAIVRMYAASGF 170
           V P++ TF    LL  C D       L   LH    K+G  R+HV V TAI+ MY+  G 
Sbjct: 67  VEPNHITFI--ALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR 126

Query: 171 LLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRL 230
              A  VFD M D++SVTWN +I G ++ G+++ A  +FD+MP R+++SWTA+I+G+ + 
Sbjct: 127 FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKK 186

Query: 231 NRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVR 290
              EEA  L++R +   G++P  + ++    + +NLGAL     VH Y   + FK  +VR
Sbjct: 187 GYQEEAL-LWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK-NNVR 246

Query: 291 IANSLIDCYAKCGCINSASRVF---EEMIHDAW-----------NGKEAMESFEMMEKEG 350
           ++NSLID Y +CGC+  A +VF   E+    +W           N  E++  F  M+++G
Sbjct: 247 VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG 306

Query: 351 HVPNRVTFLSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEA 410
             P+ VTF   L+ACSH GLVEEGL +F+ M  +YRI P I HYG L+D+  RAGRLE+A
Sbjct: 307 FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA 366

Query: 411 EKIALEIPKEIANVVIWRTLLGACSFHG-NVSIAERVTRRILEMEGAYGGDYVLMSNIFA 470
            K+   +P +  N V+  +LL ACS HG N+ +AER+ + + ++      +YV++SN++A
Sbjct: 367 LKLVQSMPMK-PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYA 426

Query: 471 AAGKYGDAEKWRRLMDYSNSSKVPGQSLV 482
           A GK+  A K RR M      K PG S +
Sbjct: 427 ADGKWEGASKMRRKMKGLGLKKQPGFSSI 450

BLAST of Lag0012216 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.1e-68
Identity = 138/380 (36.32%), Postives = 219/380 (57.63%), Query Frame = 0

Query: 116 DTFAYSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVF 175
           D   + FL+ + +++E    G Q H+  ++ GF++ VYV+ ++V MYA  GF+  A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175

Query: 176 DEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAG 235
            +M  R  V+W  ++ G  K G +E AR++FD+MP RN+ +W+ +I+GY + N  E+A  
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235

Query: 236 LFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDC 295
           LF   +   G+   E  ++++  S ++LGAL+  +  + Y  K    V ++ +  +L+D 
Sbjct: 236 LF-EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDM 295

Query: 296 YAKCGCINSASRVFE---EMIHDAW-----------NGKEAMESFEMMEKEGHVPNRVTF 355
           + +CG I  A  VFE   E    +W           +  +AM  F  M   G +P  VTF
Sbjct: 296 FWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 355

Query: 356 LSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIP 415
            ++LSACSHGGLVE+GLE +E M  ++ I P + HYG ++DMLGRAG+L EAE   L++ 
Sbjct: 356 TAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 415

Query: 416 KEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAE 475
            +  N  I   LLGAC  + N  +AERV   +++++  + G YVL+SNI+A AG++   E
Sbjct: 416 VK-PNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIE 475

Query: 476 KWRRLMDYSNSSKVPGQSLV 482
             R +M      K PG SL+
Sbjct: 476 SLRDMMKEKLVKKPPGWSLI 492

BLAST of Lag0012216 vs. ExPASy TrEMBL
Match: A0A0A0L1E8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193260 PE=4 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 1.3e-234
Identity = 413/497 (83.10%), Postives = 442/497 (88.93%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M SLWKGCKF S +S S  + LQFLSFSS LQIKSLSPSAAS+ LR S S   LISQVIK
Sbjct: 1   MHSLWKGCKFFSPRSSSTSQNLQFLSFSSFLQIKSLSPSAASDPLRCSSS--FLISQVIK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK T QIRS IITSGLLLNAT NFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFLLHSCADLEL GPG QLHALT K+GF SHVYVQTA++RMYAASGFLLDA+KVFDEMPD
Sbjct: 121 SFLLHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAVLRMYAASGFLLDAMKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK+GEL+RARDVFDQMP R VVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAH+GMEP E+TLLTIFP+ISNLGALK+CQSVHAYAEKKGFKV DVRIANSLIDCYAKCG
Sbjct: 241 VAHFGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVRIANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+MEKEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEFFEKMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           A+VVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ASVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           RLMD S  SK+PGQSLV
Sbjct: 481 RLMDSSKFSKIPGQSLV 495

BLAST of Lag0012216 vs. ExPASy TrEMBL
Match: A0A5A7UYK1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00550 PE=4 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 2.2e-234
Identity = 414/497 (83.30%), Postives = 439/497 (88.33%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M  LWKGCKF+SS+S S F+ LQFLSFSS LQIKS SPSAAS SL  SPS   LISQV K
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS--FLISQVFK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK   QIRS II SGLLLNATTNFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFL HSCADLEL GPG QLHALT K+GF SHVYVQTAI+RMYA+SGFLLDALKVFDEMPD
Sbjct: 121 SFLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK GEL RAR+VFDQMP +NVVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKV DVR+ANSLIDCYAKCG
Sbjct: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+M KEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEFF+KMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFFKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           ANVVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ANVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           R MD SN SK+PGQSLV
Sbjct: 481 RSMDSSNFSKIPGQSLV 495

BLAST of Lag0012216 vs. ExPASy TrEMBL
Match: A0A1S4DUC6 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485965 PE=4 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 2.2e-234
Identity = 414/497 (83.30%), Postives = 439/497 (88.33%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M  LWKGCKF+SS+S S F+ LQFLSFSS LQIKS SPSAAS SL  SPS   LISQV K
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS--FLISQVFK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK   QIRS II SGLLLNATTNFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFL HSCADLEL GPG QLHALT K+GF SHVYVQTAI+RMYA+SGFLLDALKVFDEMPD
Sbjct: 121 SFLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK GEL RAR+VFDQMP +NVVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKV DVR+ANSLIDCYAKCG
Sbjct: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+M KEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEFF+KMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFFKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           ANVVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ANVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           R MD SN SK+PGQSLV
Sbjct: 481 RSMDSSNFSKIPGQSLV 495

BLAST of Lag0012216 vs. ExPASy TrEMBL
Match: A0A5D3CDM6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00650 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 1.1e-233
Identity = 413/497 (83.10%), Postives = 438/497 (88.13%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSFSSSLQIKSLSPSAASESLRLSPSPPLLISQVIK 60
           M  LWKGCKF+SS+S S F+ LQFLSFSS LQIKS SPSAAS SL  SPS   LISQV K
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS--FLISQVFK 60

Query: 61  FAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAY 120
           +A THK   QIRS II SGLLLNATTNFILLC+TLLHCYPLY+PLR+FP +PPSYDTFAY
Sbjct: 61  YATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAY 120

Query: 121 SFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPD 180
           SFL HSCADLEL GPG QLHALT K+GF SHVYVQTAI+RMYA+SGFLLDALKVFDEMPD
Sbjct: 121 SFLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPD 180

Query: 181 RSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240
           RSSVTWNVLITGLVK GEL RAR+VFDQMP +NVVSWTAIIDGYTRLNRHEEAAGLFWRM
Sbjct: 181 RSSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRM 240

Query: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCG 300
           VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKV DVR+ANSLIDCYAKCG
Sbjct: 241 VAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCG 300

Query: 301 CINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLSI 360
           CINSAS+VFEEM  +  N                GKEAMESFE+M KEGH PNRVTFLSI
Sbjct: 301 CINSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSI 360

Query: 361 LSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEI 420
           +SACSHGGLVEEGLEF +KMV EY+I PDIMHYGSLIDMLGRAGR+EEAEKIALEIPKEI
Sbjct: 361 VSACSHGGLVEEGLEFIKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEI 420

Query: 421 ANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWR 480
           ANVVIWRTLLGACSFHGNVS+AERVT+RIL MEGAYGGDYVLMSNIFAAAGKYGDAE+WR
Sbjct: 421 ANVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWR 480

Query: 481 RLMDYSNSSKVPGQSLV 482
           R MD SN SK+PGQSLV
Sbjct: 481 RSMDSSNFSKIPGQSLV 495

BLAST of Lag0012216 vs. ExPASy TrEMBL
Match: A0A6J1DUA5 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023168 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 2.8e-229
Identity = 417/498 (83.73%), Postives = 436/498 (87.55%), Query Frame = 0

Query: 1   MQSLWKGCKFLSSKSLSAFEILQFLSF-SSSLQIKSLSPSAASESLRLSPSPPLLISQVI 60
           M SLWK  KFLSSK+ SAFE LQFLS  SSSLQIKSLSPSAASESLR SP P L+ISQVI
Sbjct: 1   MLSLWKPWKFLSSKTFSAFETLQFLSLSSSSLQIKSLSPSAASESLRRSP-PRLVISQVI 60

Query: 61  KFAATHKTTHQIRSSIITSGLLLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFA 120
           K+A THK   Q RS IITSGLLL+AT +FILLC+TLL CYPL+EPLRRFP  PPSYDTF 
Sbjct: 61  KYATTHKAAQQFRSFIITSGLLLHATAHFILLCNTLLRCYPLFEPLRRFPSFPPSYDTFV 120

Query: 121 YSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMP 180
           YSFLLHSCADLEL  PGLQLHALTLKVGFRSHVYVQT+IVR+YAASGFLLDALKVFDEMP
Sbjct: 121 YSFLLHSCADLELLLPGLQLHALTLKVGFRSHVYVQTSIVRLYAASGFLLDALKVFDEMP 180

Query: 181 DRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWR 240
           DRSSVTWNVLITGLVK GELERAR VFD+MP R VVSWTAIIDGYTRLNRHEEAAGLFWR
Sbjct: 181 DRSSVTWNVLITGLVKLGELERARAVFDRMPARTVVSWTAIIDGYTRLNRHEEAAGLFWR 240

Query: 241 MVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKC 300
           MVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFK  DVRI NSLIDCYAKC
Sbjct: 241 MVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKASDVRITNSLIDCYAKC 300

Query: 301 GCINSASRVFEEMIHDAWN----------------GKEAMESFEMMEKEGHVPNRVTFLS 360
           GCI+SAS VFEEM  +  N                G EAMESFEMMEKEGH  NRVTFLS
Sbjct: 301 GCIDSASGVFEEMSVERKNLVSWTSIISGFTMHGMGAEAMESFEMMEKEGHKANRVTFLS 360

Query: 361 ILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKE 420
           ILS CSHGGLVEEGLEFF+K+VVEY+I PDIMHYGSLIDMLGRAGRLEEAE IA EIP E
Sbjct: 361 ILSGCSHGGLVEEGLEFFKKLVVEYQIEPDIMHYGSLIDMLGRAGRLEEAEGIASEIPME 420

Query: 421 IANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKW 480
           IANVVIWRTLLGACSFHGNV +AERVTRRIL MEGAYGGDYVLMSNIFAAAGKYG+AEKW
Sbjct: 421 IANVVIWRTLLGACSFHGNVLMAERVTRRILSMEGAYGGDYVLMSNIFAAAGKYGEAEKW 480

Query: 481 RRLMDYSNSSKVPGQSLV 482
           RR+MD SNS+KVPGQSLV
Sbjct: 481 RRMMDCSNSTKVPGQSLV 497

BLAST of Lag0012216 vs. TAIR 10
Match: AT1G09220.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 425.2 bits (1092), Expect = 6.8e-119
Identity = 229/460 (49.78%), Postives = 296/460 (64.35%), Query Frame = 0

Query: 60  KFAATHKTTHQIRSSIITSGLLL-------------NATTNFILLCDTLLHCYPLYEPLR 119
           K+ +  K  HQ+ S   TSG LL             N       L +T LH Y LY+ L+
Sbjct: 45  KYESNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQ 104

Query: 120 RFPHVP------PSYDTFAYSFLLHSCADLELAG--PGLQLHALTLKVGFRSHVYVQTAI 179
           R   +       P +D+F Y FLL + ++        G+ LH LTLK+GF SHVYVQTA+
Sbjct: 105 RLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTAL 164

Query: 180 VRMYAASGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWT 239
           V MY   G ++DA KVFDEMP+R+ VTWNV+ITGL   G+ E+A    ++MP R VVSWT
Sbjct: 165 VGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 224

Query: 240 AIIDGYTRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEK 299
            IIDGY R+++ +EA  LF RMVA   ++P EIT+L I P++ NLG LK+C SVHAY  K
Sbjct: 225 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK 284

Query: 300 KGFKVPDVRIANSLIDCYAKCGCINSASRVFEEMIHDAWN----------------GKEA 359
           +GF   D+R+ NSLID YAKCGCI SA + F E+ +   N                GKEA
Sbjct: 285 RGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEA 344

Query: 360 MESFEMMEKEGHVPNRVTFLSILSACSHGGLVEEG-LEFFEKMVVEYRIGPDIMHYGSLI 419
           +  F+ ME+ G  PNRVT +S+L+ACSHGGL EE  LEFF  MV EY+I PD+ HYG L+
Sbjct: 345 VSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404

Query: 420 DMLGRAGRLEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYG 479
           DML R GRLEEAEKIALEIP E    V+WR LLGACS + +  +AERVTR+++E+E ++G
Sbjct: 405 DMLRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHG 464

Query: 480 GDYVLMSNIFAAAGKYGDAEKWRRLMDYSNSSKVPGQSLV 482
           GDYVLMSNIF   G++ DA+++R+ MD    +K+PG S V
Sbjct: 465 GDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503

BLAST of Lag0012216 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 282.0 bits (720), Expect = 9.3e-76
Identity = 155/415 (37.35%), Postives = 245/415 (59.04%), Query Frame = 0

Query: 81  LLNATTNFILLCDTLLHCYPLYEPLRRFPHVPPSYDTFAYSFLLHSCADLELAGPGLQLH 140
           ++ A T+  L CD +     +Y+ L R     P  D F + F+  SCA L     G Q+H
Sbjct: 79  IIRAYTHNSLYCDVI----RIYKQLLRKSFELP--DRFTFPFMFKSCASLGSCYLGKQVH 138

Query: 141 ALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELE 200
               K G R HV  + A++ MY     L+DA KVFDEM +R  ++WN L++G  + G+++
Sbjct: 139 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 198

Query: 201 RARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSI 260
           +A+ +F  M  + +VSWTA+I GYT +  + EA   F+R +   G+EP EI+L+++ PS 
Sbjct: 199 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD-FFREMQLAGIEPDEISLISVLPSC 258

Query: 261 SNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDCYAKCGCINSASRVFEEMIHD---AW 320
           + LG+L++ + +H YAE++GF +    + N+LI+ Y+KCG I+ A ++F +M      +W
Sbjct: 259 AQLGSLELGKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 318

Query: 321 -----------NGKEAMESFEMMEKEGHVPNRVTFLSILSACSHGGLVEEGLEFFEKMVV 380
                      N   A+E+F  M++    PN +TFL +LSACSH G+ +EGL +F+ M  
Sbjct: 319 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 378

Query: 381 EYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIA 440
           +Y+I P I HYG LID+L RAG+LE A +I   +P +  +  IW +LL +C   GN+ +A
Sbjct: 379 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGSLLSSCRTPGNLDVA 438

Query: 441 ERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAEKWRRLMDYSNSSKVPGQSLV 482
                 ++E+E    G+YVL++NI+A  GK+ D  + R+++   N  K PG SL+
Sbjct: 439 LVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484

BLAST of Lag0012216 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 276.2 bits (705), Expect = 5.1e-74
Identity = 147/390 (37.69%), Postives = 226/390 (57.95%), Query Frame = 0

Query: 105 LRRFPHVPPSYDTFAYSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAA 164
           L  F  + PS+ TF  +F+  + A    A P   LH+   + GF S  +  T ++  YA 
Sbjct: 72  LLSFDGLRPSHHTF--NFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAK 131

Query: 165 SGFLLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGY 224
            G L  A +VFDEM  R    WN +ITG  + G+++ A ++FD MP +NV SWT +I G+
Sbjct: 132 LGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGF 191

Query: 225 TRLNRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVP 284
           ++   + EA  +F  M     ++P  IT++++ P+ +NLG L+I + +  YA + GF   
Sbjct: 192 SQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF-FD 251

Query: 285 DVRIANSLIDCYAKCGCINSASRVFEEMIHD----AWN---------GK--EAMESFEMM 344
           ++ + N+ I+ Y+KCG I+ A R+FEE+ +     +WN         GK  EA+  F  M
Sbjct: 252 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 311

Query: 345 EKEGHVPNRVTFLSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGR 404
            +EG  P+ VTF+ +L AC HGG+V +G E F+ M   ++I P + HYG +ID+LGR G+
Sbjct: 312 LREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGK 371

Query: 405 LEEAEKIALEIPKEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSN 464
           L+EA  +   +P +  + V+W TLLGACSFHGNV IAE  +  + ++E    G+ V+MSN
Sbjct: 372 LQEAYDLIKTMPMK-PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSN 431

Query: 465 IFAAAGKYGDAEKWRRLMDYSNSSKVPGQS 480
           I+AA  K+    + R+LM     +K  G S
Sbjct: 432 IYAANEKWDGVLRMRKLMKKETMTKAAGYS 457

BLAST of Lag0012216 vs. TAIR 10
Match: AT1G05750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 1.3e-72
Identity = 154/389 (39.59%), Postives = 228/389 (58.61%), Query Frame = 0

Query: 111 VPPSYDTFAYSFLLHSCADLELAGPGL--QLHALTLKVGF-RSHVYVQTAIVRMYAASGF 170
           V P++ TF    LL  C D       L   LH    K+G  R+HV V TAI+ MY+  G 
Sbjct: 67  VEPNHITFI--ALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR 126

Query: 171 LLDALKVFDEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRL 230
              A  VFD M D++SVTWN +I G ++ G+++ A  +FD+MP R+++SWTA+I+G+ + 
Sbjct: 127 FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKK 186

Query: 231 NRHEEAAGLFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVR 290
              EEA  L++R +   G++P  + ++    + +NLGAL     VH Y   + FK  +VR
Sbjct: 187 GYQEEAL-LWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK-NNVR 246

Query: 291 IANSLIDCYAKCGCINSASRVF---EEMIHDAW-----------NGKEAMESFEMMEKEG 350
           ++NSLID Y +CGC+  A +VF   E+    +W           N  E++  F  M+++G
Sbjct: 247 VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG 306

Query: 351 HVPNRVTFLSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEA 410
             P+ VTF   L+ACSH GLVEEGL +F+ M  +YRI P I HYG L+D+  RAGRLE+A
Sbjct: 307 FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA 366

Query: 411 EKIALEIPKEIANVVIWRTLLGACSFHG-NVSIAERVTRRILEMEGAYGGDYVLMSNIFA 470
            K+   +P +  N V+  +LL ACS HG N+ +AER+ + + ++      +YV++SN++A
Sbjct: 367 LKLVQSMPMK-PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYA 426

Query: 471 AAGKYGDAEKWRRLMDYSNSSKVPGQSLV 482
           A GK+  A K RR M      K PG S +
Sbjct: 427 ADGKWEGASKMRRKMKGLGLKKQPGFSSI 450

BLAST of Lag0012216 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 2.9e-69
Identity = 138/380 (36.32%), Postives = 219/380 (57.63%), Query Frame = 0

Query: 116 DTFAYSFLLHSCADLELAGPGLQLHALTLKVGFRSHVYVQTAIVRMYAASGFLLDALKVF 175
           D   + FL+ + +++E    G Q H+  ++ GF++ VYV+ ++V MYA  GF+  A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175

Query: 176 DEMPDRSSVTWNVLITGLVKWGELERARDVFDQMPTRNVVSWTAIIDGYTRLNRHEEAAG 235
            +M  R  V+W  ++ G  K G +E AR++FD+MP RN+ +W+ +I+GY + N  E+A  
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235

Query: 236 LFWRMVAHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVPDVRIANSLIDC 295
           LF   +   G+   E  ++++  S ++LGAL+  +  + Y  K    V ++ +  +L+D 
Sbjct: 236 LF-EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDM 295

Query: 296 YAKCGCINSASRVFE---EMIHDAW-----------NGKEAMESFEMMEKEGHVPNRVTF 355
           + +CG I  A  VFE   E    +W           +  +AM  F  M   G +P  VTF
Sbjct: 296 FWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 355

Query: 356 LSILSACSHGGLVEEGLEFFEKMVVEYRIGPDIMHYGSLIDMLGRAGRLEEAEKIALEIP 415
            ++LSACSHGGLVE+GLE +E M  ++ I P + HYG ++DMLGRAG+L EAE   L++ 
Sbjct: 356 TAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 415

Query: 416 KEIANVVIWRTLLGACSFHGNVSIAERVTRRILEMEGAYGGDYVLMSNIFAAAGKYGDAE 475
            +  N  I   LLGAC  + N  +AERV   +++++  + G YVL+SNI+A AG++   E
Sbjct: 416 VK-PNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIE 475

Query: 476 KWRRLMDYSNSSKVPGQSLV 482
             R +M      K PG SL+
Sbjct: 476 SLRDMMKEKLVKKPPGWSLI 492

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882176.13.0e-23885.11pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isofor... [more]
XP_004147552.12.7e-23483.10pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sa... [more]
XP_016899586.14.6e-23483.30PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial ... [more]
TYK08449.12.3e-23383.10pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_022156231.15.8e-22983.73pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isofor... [more]
Match NameE-valueIdentityDescription
Q680Z79.5e-11849.78Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidop... [more]
Q9SIL51.3e-7437.35Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
Q9FNN77.2e-7337.69Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... [more]
Q9MA501.8e-7139.59Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop... [more]
Q9FG164.1e-6836.32Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0L1E81.3e-23483.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193260 PE=4 SV=1[more]
A0A5A7UYK12.2e-23483.30Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DUC62.2e-23483.30pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis ... [more]
A0A5D3CDM61.1e-23383.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1DUA52.8e-22983.73pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isofor... [more]
Match NameE-valueIdentityDescription
AT1G09220.16.8e-11949.78Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20540.19.3e-7637.35mitochondrial editing factor 21 [more]
AT5G08510.15.1e-7437.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G05750.11.3e-7239.59Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G06540.12.9e-6936.32Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 156..181
e-value: 0.019
score: 15.2
coord: 184..213
e-value: 4.0E-7
score: 29.8
coord: 215..241
e-value: 3.5E-5
score: 23.8
coord: 339..365
e-value: 4.6E-4
score: 20.3
coord: 376..396
e-value: 0.0096
score: 16.1
coord: 290..313
e-value: 4.5E-5
score: 23.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 290..313
e-value: 5.7E-5
score: 21.0
coord: 215..249
e-value: 4.1E-4
score: 18.3
coord: 339..373
e-value: 3.3E-4
score: 18.6
coord: 184..215
e-value: 5.4E-8
score: 30.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 11.169622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..319
score: 9.021208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..372
score: 8.571795
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 317..478
e-value: 1.8E-28
score: 101.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 182..263
e-value: 1.1E-17
score: 66.0
coord: 63..181
e-value: 4.0E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 264..316
e-value: 4.5E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR47924:SF2PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 196..481
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 196..481
coord: 86..198
NoneNo IPR availablePANTHERPTHR47924:SF2PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 86..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0012216.1Lag0012216.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding