Lag0011963 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011963
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H-like superfamily protein
Locationchr1: 35568835 .. 35570639 (+)
RNA-Seq ExpressionLag0011963
SyntenyLag0011963
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAATATGTGAGAGACCTATTAGACACAAAAATGAAAGTTTAGAAACTTATTAAATATAAACTAAAAATTAGGTACCTTTTTGATATTTTAAAACCGTTGGAACCAAATATAGATGAATATGTATGAATGTTCTGGTACTAAATTTGTAATTTACCCTAAAAAATTAGGTTAAAATACCATTTTGGTCTCTATGCTTTGAGTCTCATTTTATTTTAGTCCTACTTTCAAATGTGTCCAAATTTAGTCTTTTTACTTTTTATAAAGCTTAAAATTAGTCTTTATTGTTAGTTTGAAGTTAATTTTTATTGAACTTGGTAAAATAATAATAATAATAATAATAATAATAATAATAATAATTTCTATGGAAGAAAAAACATAAAGTGAATATGTTTATAAAGCTTAAAATTAGTCTTTATTGTCTGGCGCAGCTTGTTATGGGGGCAGAAGCTCTTAGCTCGAGGATGTCGCTGGAGGATCGATTATGGGCGTGCTACACCTATCTACGACTCGAACTGGCTGCCGAATGAGCTTTCTCTTCAGATACAGTCAGCACCATCGCTCCCACTTGCTAGTACGGTTAGCGAGCTATTTTCTGTGTCTGGTGGATGAAATGAGGCTATGCTTAGAGCTCACTTTAATGAGTCTGATTGTGAGACCATTTTGAGAATCCCAGTTCGACATGGCTTGGGGGAGGATCACTTAATTTGGCACTTTGAGAAACATGAGACCTTTTCTGTGAAGAGTGGATATCGACTTGTCCATATGTTGGCTGTTCAGGACCGGCCCTCATCCTCAAATACTGATAGTATGCGTGTGTGGTGGTCCTCCCTTTGGAAGCTGAATGTGCCTAGTAAGCTCAGGTTTTTTCTCTGGCCGTTGTTCCAAGACCGTACCGTTTGCCTACCAATGTAAACCTTCTCAAGTGTGGACTCAGTGTCGCTAGTCTGTGTGTCTTGTGCGACGAGGATGCTAAGGACCGTCTCCATCTATTCTGGAATTGTCCTATGGTTAAGAATATGTGGTTGGTTTCCAAATTTGCACCCTTCCATCGATCATTTTCTCATTTCAGGTTCGAGGAAGTCATTGAGATGATGAAGGACAAACTCTCAGGGCTGGATTTTGAGCTTGTGGTCACCTTTTGGTGGTCCATGTGGAATCTCAAGAACAGTTTGAGTTGGGGTGGCCGATCAGATGGTCGGGATTTGTGGGCATACTGGAGCTACTACCTGAGTGCCTTCCATGCTGGGGGAGGCGTTGCCTTGCAGGGGATTGCCTGCGACCGCAATCGAGTGATCGTGAGGAGCGCTGTGTATGGAGTCCGCCCCCTACTAGGAAGCTGAAGCTTAATGTTGATGCTTCTGTCAGGCCTGATACAGGGGAAACAGAGGGTGGCTGTGTGATGCGTGGGGGTGATGGTGAGGTATTTATGGCGGCCTGTTTGGAACTGCAGAGGTGTTGGAGCGTGGATTTGGCTAAGGGATGGGCTGTGTATAAGGGGTCCAATTTGCTCGACAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCACAGAGGTTAGTCAAAATCCTCCATGGCGATCTCCATGATGTCTCGGAAGTGGGGCTGCTAATGGATGACATTTGAAGGATCCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACACTACGTAAGGGAAACAAGATGGCGCATGTTCTGGCTAGCTTGGCCTTTTCATATGTTGACTGTGTTTGGCTTGAAGCGTGGCTCAGCGAAATCTCGGACGTCCTGAGGGGTGATGCTATTTCAGCTGCGTGA

mRNA sequence

ATGCAGAATATCTTGTTATGGGGGCAGAAGCTCTTAGCTCGAGGATGTCGCTGGAGGATCGATTATGGGCGTGCTACACCTATCTACGACTCGAACTGGCTGCCGAATGAGCTTTCTCTTCAGATACAGTCAGCACCATCGCTCCCACTTGCTAGTACGGTTAGCGAGCTATTTTCTGTGTCTGTTCGACATGGCTTGGGGGAGGATCACTTAATTTGGCACTTTGAGAAACATGAGACCTTTTCTGTGAAGAGTGGATATCGACTTGTCCATATGTTGGCTGTTCAGGACCGGCCCTCATCCTCAAATACTGATAGTATGCGTGTGTGGTGGTCCTCCCTTTGGAAGCTGAATGTGCCTAGTAAGCTCAGTGTCGCTAGTCTGTGTGTCTTGTGCGACGAGGATGCTAAGGACCGTCTCCATCTATTCTGGAATTGTCCTATGGTTAAGAATATGTGGTTGGTTTCCAAATTTGCACCCTTCCATCGATCATTTTCTCATTTCAGGTTCGAGGAAGTCATTGAGATGATGAAGGACAAACTCTCAGGGCTGGATTTTGAGCTTGTGGTCACCTTTTGGTGGTCCATGTGGAATCTCAAGAACAGTTTGAGTTGGGGTGGCCGATCAGATGGTCGGGATTTGTGGGCATACTGGAGCTACTACCTGAGTGCCTTCCATGCTGGGGGAGGCGTTGCCTTGCAGGGGATTGCCTGCGACCGCAATCGAGTGATCGTGAGGAGCGCTGTGCCTGATACAGGGGAAACAGAGGGTGGCTGTGTGATGCGTGGGGGTGATGGTGAGGTATTTATGGCGGCCTGTTTGGAACTGCAGAGGTGTTGGAGCGTGGATTTGGCTAAGGGATGGGCTGTGTATAAGGGGTCCAATTTGCTCGACAGTTGGGGTTTGCGGAGTTTGTGGATCCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACACTACGTAAGGGAAACAAGATGGCGCATGTTCTGGCTAGCTTGGCCTTTTCATATGTTGACTGTGTTTGGCTTGAAGCGTGGCTCAGCGAAATCTCGGACGTCCTGAGGGGTGATGCTATTTCAGCTGCGTGA

Coding sequence (CDS)

ATGCAGAATATCTTGTTATGGGGGCAGAAGCTCTTAGCTCGAGGATGTCGCTGGAGGATCGATTATGGGCGTGCTACACCTATCTACGACTCGAACTGGCTGCCGAATGAGCTTTCTCTTCAGATACAGTCAGCACCATCGCTCCCACTTGCTAGTACGGTTAGCGAGCTATTTTCTGTGTCTGTTCGACATGGCTTGGGGGAGGATCACTTAATTTGGCACTTTGAGAAACATGAGACCTTTTCTGTGAAGAGTGGATATCGACTTGTCCATATGTTGGCTGTTCAGGACCGGCCCTCATCCTCAAATACTGATAGTATGCGTGTGTGGTGGTCCTCCCTTTGGAAGCTGAATGTGCCTAGTAAGCTCAGTGTCGCTAGTCTGTGTGTCTTGTGCGACGAGGATGCTAAGGACCGTCTCCATCTATTCTGGAATTGTCCTATGGTTAAGAATATGTGGTTGGTTTCCAAATTTGCACCCTTCCATCGATCATTTTCTCATTTCAGGTTCGAGGAAGTCATTGAGATGATGAAGGACAAACTCTCAGGGCTGGATTTTGAGCTTGTGGTCACCTTTTGGTGGTCCATGTGGAATCTCAAGAACAGTTTGAGTTGGGGTGGCCGATCAGATGGTCGGGATTTGTGGGCATACTGGAGCTACTACCTGAGTGCCTTCCATGCTGGGGGAGGCGTTGCCTTGCAGGGGATTGCCTGCGACCGCAATCGAGTGATCGTGAGGAGCGCTGTGCCTGATACAGGGGAAACAGAGGGTGGCTGTGTGATGCGTGGGGGTGATGGTGAGGTATTTATGGCGGCCTGTTTGGAACTGCAGAGGTGTTGGAGCGTGGATTTGGCTAAGGGATGGGCTGTGTATAAGGGGTCCAATTTGCTCGACAGTTGGGGTTTGCGGAGTTTGTGGATCCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACACTACGTAAGGGAAACAAGATGGCGCATGTTCTGGCTAGCTTGGCCTTTTCATATGTTGACTGTGTTTGGCTTGAAGCGTGGCTCAGCGAAATCTCGGACGTCCTGAGGGGTGATGCTATTTCAGCTGCGTGA

Protein sequence

MQNILLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVSVRHGLGEDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPSSSNTDSMRVWWSSLWKLNVPSKLSVASLCVLCDEDAKDRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTFWWSMWNLKNSLSWGGRSDGRDLWAYWSYYLSAFHAGGGVALQGIACDRNRVIVRSAVPDTGETEGGCVMRGGDGEVFMAACLELQRCWSVDLAKGWAVYKGSNLLDSWGLRSLWILHPWDNGKVLFTLRKGNKMAHVLASLAFSYVDCVWLEAWLSEISDVLRGDAISAA
Homology
BLAST of Lag0011963 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 172.2 bits (435), Expect = 8.4e-39
Identity = 122/445 (27.42%), Postives = 194/445 (43.60%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSEL------- 64
            +LWG+ LL +G RWRI  G +  IY  NW+PN+ +L+I S+P LPL S VS L       
Sbjct: 704  ILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGG 763

Query: 65   ------------------FSVSVRHGLGEDHLIWHFEKHETFSVKSGYR--LVHMLAVQD 124
                               S+ +  G  ED LIW++EK   +SV+SGY+  L++   VQ 
Sbjct: 764  WQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQ- 823

Query: 125  RPSSSNTDSMRVWWSSLWKLNVPSKLSV-----------------------ASLCVLCDE 184
             PSSS+++ +R WW+  WK+++P+K+ V                        + C  C  
Sbjct: 824  APSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGR 883

Query: 185  DAKDRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTFWW 244
            + +D +HLFW C   + +W+ SKF       S F    ++    + LS  DFE +    W
Sbjct: 884  NGEDSIHLFWICKFAEALWINSKFG----KLSPFL---ILRESHESLSKADFEELCVVIW 943

Query: 245  SMWNLKNSLSWGGRSD-----GRDLWAYWSYYLSAFHAGGGVALQGIACDRNRVIVRSAV 304
             +WN +N+ ++   +      G +L  + + Y   F       + G   +   ++ +   
Sbjct: 944  GLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQP-- 1003

Query: 305  PDTG----ETEG-----------GCVMRGGDGEVFMAACLELQRCWSVDLAKGWAVYKGS 360
            PD G     T+            G ++    G+V  AA   L+   SVD+A+  A  +G 
Sbjct: 1004 PDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGL 1063

BLAST of Lag0011963 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-24
Identity = 112/447 (25.06%), Postives = 177/447 (39.60%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVSVRH 64
            L WG++LL +G RWR+  G +  +Y   WLP     +I S P LPL++ V +LF+ S + 
Sbjct: 577  LQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQW 636

Query: 65   GL------------------------GEDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPS 124
             +                        G D LIWH+E++  +SVKSGYRL  +   +D+ S
Sbjct: 637  NVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGL--EKDKMS 696

Query: 125  ---SSNTDSMRVWWSSLWKLNVPS-----------------------KLSVASLCVLCDE 184
               S+  D    +W  +W L +P+                       K++   +C  C  
Sbjct: 697  GEPSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHR 756

Query: 185  DAKDRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTFWW 244
             A+  LH  W C   K +W  S +      +    F E+   ++   SG +  L     W
Sbjct: 757  KAESVLHAVWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCW 816

Query: 245  SMWNLKNSLSWGGRSD-GRDLWAYWSYYLSAFHAGGGV--ALQGIACDRNRVI----VRS 304
             +WN +NS  + G+S+    L +  +     F     +   + G        +       
Sbjct: 817  GLWNRRNSFIFEGKSETAIQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQGWRPPP 876

Query: 305  AVPDTGETEG-GCVMRGGDGEVFMAACL-ELQRCWSVDLAKGWAVYKGSNLLDSWG---- 361
            AV       G G V+R  +GE FMAAC+  +   +     +  A  +G       G    
Sbjct: 877  AVKSGDSVRGVGVVVRNANGE-FMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDA 936

BLAST of Lag0011963 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 115.9 bits (289), Expect = 7.1e-22
Identity = 71/258 (27.52%), Postives = 111/258 (43.02%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVSVRH 64
            L WG++LL +G RWR+  G +  +Y   WLP     +I S P LPL++ V +LF+ S + 
Sbjct: 843  LQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQW 902

Query: 65   GL------------------------GEDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPS 124
             +                        G D LIWH+E++  +SVKSGYR    LA  ++  
Sbjct: 903  NVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYR----LACLEKDK 962

Query: 125  SSNTDSMRV-----WWSSLWKLNVPS-----------------------KLSVASLCVLC 184
             S   S+RV     +W  +W L +P+                       K++   +C  C
Sbjct: 963  MSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNC 1022

Query: 185  DEDAKDRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTF 211
               A+  LH  W C   K +W  S +      +    F E+   ++   SG +  L    
Sbjct: 1023 HRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYL 1082

BLAST of Lag0011963 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])

HSP 1 Score: 113.6 bits (283), Expect = 3.5e-21
Identity = 64/253 (25.30%), Postives = 118/253 (46.64%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVSVRH 64
            +LWG++++++G +WRI  G++  ++  NWLP  L+ +  S PSLP  + V+EL +     
Sbjct: 838  ILWGRQVISKGSKWRIGNGQSIMLHKENWLPRPLTFKPISKPSLPADALVAELINEDHTW 897

Query: 65   GLG------------------------EDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPS 124
              G                        +D +IWH++K   +SVKSGY++   L    +P+
Sbjct: 898  NEGLIHRHFTKIDAEAIVRILLPRRPMKDEVIWHYDKKGQYSVKSGYQIALNLKFPAKPT 957

Query: 125  SSNTDSMRVWWSSLWKLNVPSKLSVAS-----------------------LCVLCDEDAK 184
            SS T   +  W+++W L +P K+ + +                       LC  C++  +
Sbjct: 958  SSATTENQ--WNAIWLLTLPEKIRIFAWRAAKNLLPSAENLWKRKVLQEPLCQFCNKKLE 1017

Query: 185  DRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTFWWSMW 211
               H    C +V+ +W +++F    +         ++  +K + S  D EL+VT  W +W
Sbjct: 1018 TIFHALVGCKVVQKIWKITRFEDDLKDSVEQDMLSLLIELKLRRSKDDIELLVTILWMIW 1077

BLAST of Lag0011963 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina])

HSP 1 Score: 113.2 bits (282), Expect = 4.6e-21
Identity = 63/251 (25.10%), Postives = 107/251 (42.63%), Query Frame = 0

Query: 5   LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELF------ 64
           +LWG+++L +G RWRI  G    I  SNW+P   + ++   PSLP  + VSEL       
Sbjct: 639 ILWGRQVLQKGTRWRIGNGEKIQIQASNWIPRPTTFKLIVEPSLPTGAKVSELILPNQQW 698

Query: 65  ------------------SVSVRHGLGEDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPS 124
                             S+ +     ED +IWH+++   +SVKSGY+L   +   + P+
Sbjct: 699 NESMINQSFARMDADIIKSILLPRTPQEDEIIWHYDRKGLYSVKSGYQLALKIKFPEPPT 758

Query: 125 SSNTDSMRVWWSSLWKLNVPSKLSV-----------------------ASLCVLCDEDAK 184
           SS   S    W +LWKLN+P K+ +                         +C +C E  +
Sbjct: 759 SSAGASQE--WQNLWKLNLPGKIKIFVWKAAKTFLPTAENLWRRKILQEPICTICKEGRE 818

Query: 185 DRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTFWWSMW 209
           D  H    C + + +W  +      +S         +  +  K +  + + V + W + W
Sbjct: 819 DVFHALMECKLARKIWRCTDMEATVQSIRRDDMLSTMHSLMRKGAKFEIDYVASIWRATW 878

BLAST of Lag0011963 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.0e-39
Identity = 122/445 (27.42%), Postives = 194/445 (43.60%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSEL------- 64
            +LWG+ LL +G RWRI  G +  IY  NW+PN+ +L+I S+P LPL S VS L       
Sbjct: 704  ILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGG 763

Query: 65   ------------------FSVSVRHGLGEDHLIWHFEKHETFSVKSGYR--LVHMLAVQD 124
                               S+ +  G  ED LIW++EK   +SV+SGY+  L++   VQ 
Sbjct: 764  WQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQ- 823

Query: 125  RPSSSNTDSMRVWWSSLWKLNVPSKLSV-----------------------ASLCVLCDE 184
             PSSS+++ +R WW+  WK+++P+K+ V                        + C  C  
Sbjct: 824  APSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGR 883

Query: 185  DAKDRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVTFWW 244
            + +D +HLFW C   + +W+ SKF       S F    ++    + LS  DFE +    W
Sbjct: 884  NGEDSIHLFWICKFAEALWINSKFG----KLSPFL---ILRESHESLSKADFEELCVVIW 943

Query: 245  SMWNLKNSLSWGGRSD-----GRDLWAYWSYYLSAFHAGGGVALQGIACDRNRVIVRSAV 304
             +WN +N+ ++   +      G +L  + + Y   F       + G   +   ++ +   
Sbjct: 944  GLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQP-- 1003

Query: 305  PDTG----ETEG-----------GCVMRGGDGEVFMAACLELQRCWSVDLAKGWAVYKGS 360
            PD G     T+            G ++    G+V  AA   L+   SVD+A+  A  +G 
Sbjct: 1004 PDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGL 1063

BLAST of Lag0011963 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.1e-23
Identity = 78/286 (27.27%), Postives = 121/286 (42.31%), Query Frame = 0

Query: 5   LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFS----- 64
           L+WG+K++ +G RWRI  G +  + +  WLP  ++ ++   PSLP    V +L       
Sbjct: 251 LVWGKKIIQKGYRWRIGNGNSVRVLEDPWLPRPVTFKVYDKPSLPEGMYVVDLMKGNGEW 310

Query: 65  -----------VSVRHGLG--------EDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPS 124
                            LG        ED ++WH+ K+  +SV+SGYR+   L V D   
Sbjct: 311 DEEFIRAFFNPTDAELILGMPTSEWEIEDKILWHYSKNGEYSVRSGYRMAAALQVHD--I 370

Query: 125 SSNTDSMRVWWSSLWKLNVP-----------------------SKLSVASLCVLCDEDAK 184
            SNT++   WW  LWKL +P                        K+ V   C  C   A 
Sbjct: 371 QSNTEATERWWRLLWKLKIPPKVKHFVWKMAHSWLPTNSALAYRKVQVEPYCTRCSSGAY 430

Query: 185 DRL-HLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGL----DFELVVTF 238
           + + H  W C +   +W   K   FH        E+V+  +  +LSG+    D+E  +  
Sbjct: 431 ENVFHALWGCRVNCEVW---KLTGFHGRIKRQGKEDVLAFLM-RLSGMFSKDDWEFFLIL 490

BLAST of Lag0011963 vs. ExPASy TrEMBL
Match: A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-22
Identity = 70/275 (25.45%), Postives = 114/275 (41.45%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVSVRH 64
            L+WG+K++  G RWRI  G +  + D  WLP  ++ +I   P LP       L  + ++ 
Sbjct: 1465 LVWGKKIIQAGYRWRIGNGNSVRVLDDPWLPRPVTFKIYDKPPLP-----DNLHVIDLKK 1524

Query: 65   GLG-----------------------------EDHLIWHFEKHETFSVKSGYRLVHMLAV 124
            G G                             ED ++WH+ K   +SV+SGYR+   L V
Sbjct: 1525 GNGEWDEEFVRAVFNPTDAELILQMATSECDIEDKILWHYSKDGEYSVRSGYRMAAALEV 1584

Query: 125  QDRPSSSNTDSMRVWWSSLWKLNVP-----------------------SKLSVASLCVLC 184
            +D    SNT++   WW  LWKL +P                        K+ +   C  C
Sbjct: 1585 RD--IQSNTEATNRWWRQLWKLKIPPKVKHFVWKMAHSWIPTNSALAHRKVQIEPYCTRC 1644

Query: 185  DEDAKDRL-HLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMMKDKLSGLDFELVVT 226
               A + + H  W+C +  ++W +S F+   +          +  M   L+  DFE  + 
Sbjct: 1645 SSGAYENVFHALWSCRVNCDVWKISGFSSKIKRQGKEDVLAFLMRMSSSLAKEDFEYFLV 1704

BLAST of Lag0011963 vs. ExPASy TrEMBL
Match: A0A803Q185 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.5e-20
Identity = 88/358 (24.58%), Postives = 139/358 (38.83%), Query Frame = 0

Query: 5   LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVSVRH 64
           L+WG+KL+ +G RWR+  G    + +  WLP  ++ +I   P LP       L+ V ++ 
Sbjct: 136 LMWGKKLILKGYRWRVGDGSNIRVLEDPWLPRPVTFKIYDKPPLP-----EHLWVVDLKL 195

Query: 65  GLG-----------------------------EDHLIWHFEKHETFSVKSGYRLVHMLAV 124
           G G                             +D ++WH+ K+  +SVKSGYR+   L  
Sbjct: 196 GDGTWDKPFISAVFNKDDAEMILALPNSGWDLDDKILWHYCKNGEYSVKSGYRMACELKA 255

Query: 125 QDRPSSSNTDSMRV-WWSSLWKLNVPSKL-----------------------SVASLCVL 184
           + + S    D + V WW  LW+L +P K+                       S    C  
Sbjct: 256 ERQQSD---DHLAVQWWRKLWRLKIPPKIKVFVWKLAHGWLPTSTVLAKRHVSTTDGCSR 315

Query: 185 CD-EDAKDRLHLFWNCPMVKNMWLVSKFAPFHRSFS-HFRFEEVIEMMK--DKLSGLDFE 244
           C   +++   H  W C   K  W   K   F      H + +E+  +M+    +S   FE
Sbjct: 316 CSLHNSETIFHALWECKKSKVCW---KLCDFQLEIKRHGQEDELAFLMRLSTVMSKDQFE 375

Query: 245 LVVTFWWSMWNLKNSLSWGGRSDGRDLWAYWSYYLSAFHAGGGVALQGIACDRNRV---- 294
           + +   WS+WN +N+ +  G          W Y L     GG    Q +      V    
Sbjct: 376 MFLVITWSLWNTRNACTHDGFVPQPAEMVEWCYKLLEDFQGGRSRPQEVMRREEGVWKVP 435

BLAST of Lag0011963 vs. ExPASy TrEMBL
Match: A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-19
Identity = 73/273 (26.74%), Postives = 115/273 (42.12%), Query Frame = 0

Query: 5    LLWGQKLLARGCRWRIDYGRATPIYDSNWLPNELSLQIQSAPSLPLASTVSELFSVS--- 64
            L+WG+K++ +G RWRI YG +  + +  WLP  ++ +I   P LP    V +L  ++   
Sbjct: 1336 LVWGKKIIQKGYRWRIGYGNSVRVLEDPWLPRPVTFKIYDKPPLPDQLYVIDLKKINGEW 1395

Query: 65   ----VRHGLG-----------------EDHLIWHFEKHETFSVKSGYRLVHMLAVQDRPS 124
                VR                     ED ++WH+ K   +SV+SGYR+   L V+D   
Sbjct: 1396 DEEFVRAVFNPTDADLILRMPTSEWDIEDKVLWHYSKDGEYSVRSGYRMAAALQVRD--V 1455

Query: 125  SSNTDSMRVWWSSLWKLNVPSK-----------------------LSVASLCVLCDEDA- 184
             S+T+    WW  LWKL +P K                       + V   C  C     
Sbjct: 1456 QSDTEVTEKWWRLLWKLKIPPKVKHFVWKLAHSWLPTNAVLARRNIPVEPYCNRCFNGVY 1515

Query: 185  KDRLHLFWNCPMVKNMWLVSKFAPFHRSFSHFRFEEVIEMM---KDKLSGLDFELVVTFW 226
            +D  H  W C + + +W   K   F+        E+V+  +      LS  +FE  +   
Sbjct: 1516 EDVFHAIWCCRVNREVW---KSTGFYGKIQRQGSEDVLAFLMRISTILSKEEFEFFLVLS 1575

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150918.18.4e-3927.42uncharacterized protein LOC111018954 [Momordica charantia][more]
ONI01138.12.0e-2425.06hypothetical protein PRUPE_6G123900 [Prunus persica][more]
VVA32947.17.1e-2227.52PREDICTED: retrotransposon [Prunus dulcis][more]
XP_024038343.13.5e-2125.30uncharacterized protein LOC112097373 [Citrus clementina][more]
XP_024035599.14.6e-2125.10uncharacterized protein LOC112096407 [Citrus clementina][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAR44.0e-3927.42uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803PM684.1e-2327.27Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PV255.9e-2225.45Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q1855.5e-2024.58Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P3X41.2e-1926.74Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011963.1Lag0011963.1mRNA