Lag0011884 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011884
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr1: 34353532 .. 34357762 (-)
RNA-Seq ExpressionLag0011884
SyntenyLag0011884
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTTAGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAGACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAAACCATGATGAAGATAGGGATTTTAAAATGTAAAAGCTCCTTATCGCAAGAGTCTAAACTGCATGATGATCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATATGGGTACGTAGGCAGCTTAAAGAAAGCTTTAAGCTCAGTCTCTATAAACAAAAAAATGGTGCATGACAATACAAATTGAAGAAATTCTTTAGCACTTGGGGCAATACAACAAATTGGAGTTGTACACCGTTATAAATATGAAGCTACGAGTTGGACGAATAAAAAAAGATTTCATTCCTCCAAATTCAATGTCTCGCTAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTTGTTGTTCCCGCTTCTTCAAGTTCGAAGGTTCTCACACGCTTCGTTGCAGTTCCTTCTCTTCAATTTCGAAGGTTCTCCGCTGCTGCAGTTCCTTCCTCAAAGTTTGAAGGTTCTCACGTCGCTTTGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTACAGTTCCTTCCTCAAAGTTTGAAGGTTCTCACGTCGCTTTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGCTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCACTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCATTTCGCTTCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCCGCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCGAAGTTCGAAGGTTCTCACGCGCTTCATTGTAGCTTCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCTCCAAGTTCGAAGGTTCACGCACTTCGCTTCAGTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTTCGCTGTTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCATGCGCTCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCTCTGCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTTCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCTCTTTGCTGCAGTTCCTTCCTCCAAGATCGAGGGTTTTCCGCTACTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCACGTGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCATTGCAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTATGCTCGGTTGCGCTGCTGCGCTACTTCCTAAAGTCCAAGGAGCACGTCATGTCCTTGAACTCATGTTGAAAGATGTGGCGGCGGCAAAAGTTCAAGAAACATGTCCCAAAGTAAGGAACATGTCCATGTACTCATGCTGAAAGGTGTGGCGGTGGCAAAAGTCCAAGGAACATGTCCCAAAGTCAGGAACATGTCCTTGTACTCATGCTGAAAGGCGGTGGTAGTGGCAAGAATCCAAGGAACATGTCCTTGTACTTATGCTGAAAAACATTGTACCTGCAAATTGAAGACAACAAGGATATGTATGCCTTAAAAAAAATCACTTACCTACGTACTTACCTTTTGGATGGTGGATGAAGGTATTGTGCTTGTAATTGAAATATAGGCAAAGTGTTGTGAGTAAAAAAAACAAAAAGAAGGAAGAATCTTAAAAAAAAAAAGAAAAAAAAAGAAAAAAAAAGAAAATTCAAATGAAAAGAAAAACGAAAAATTAAAAAATAAAAATAAAAATAAAAAGAGGGAGAAGGAAGTTTCCTACTTGAATCCTTTCTTGAATGCTCCCTGCAATTGATGTGTGCTCTCCCCTGTTGAGGTTCAATCCTTATTTATAGAATGGAAAGTTGGATTCAAATAGATAAATCTTATCTCCAACGACAATCTTCATCAATTTTGGGATAAGTTCAAATATAAATCTTATCTCCAACGGCAATCTTCATCAATTTTGGGATAAGTTCAAATATAAATCTTATTTCCAACGACAATCTTCATCAATTTTGGGATAAGTTCAAATATAAATCTTATCTCCAACGGCAATCTTCATTAATTTTGGGATAAGTTCAAATATAAATCCTATCTCCAAAGGCAATCTTCATCAATTTTGGGATGGGTTCGAATATAAATCTTTATCTCCAACGAGAGTCTTTGGTTCAAATTTTAACCCAAAGATATGAGATTTGATTTAAATCAAATTGAAAAATAAAAATTTGGAGATTTTGTTTCAAATTTTAGTCTAAAGTATGAGATTTGATTTAAATCAAATTGGGAGATAAATTCAAATTGATTTGATAAACTCCTAAACAGATTTGAATTGAATTAAACTGAATTTGAGTATAATTAAACTCTTATCCCAAATCAAATTTTCTAAGTTCCATATGAAAATTTTATTCCAAATTCCTACCAAATTTTGGATGCAGCCTTAAATTTACTTTAATTAAATTTTTGGCATAATCCAAATTTTATCCCAAATGAACCAAAGTCAAAACCTCAAATTCTATTCCAAATGCAAGTTAAAGTTGGATAGAATTTTACCTCAAATCAAAGTTTGGGCATGATCCAAATTTTATCCCAAACTTAAGTTCAAATTAAAGTTGTTGCCAAACAAGATAAAATCAAAATTTTGCCCAGACTTAAGTTCAAATCAAAGTTTGCTGCCAAATAAAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACACACCAAATGGGTCAAAATCAAGAACAAATACCTTGCATTTTTATTCCAAAATATATTTTTCGAGATTCACTCCCACATAACTTGTGTCTAAATCTCGAGAAGGGGGCATTTGTTGAAGGAGAAATTTTGTCCAATCACAAATTGCCACGTCATTATCTAAAATTAATGAAAAATTACTAATAATTAAATTTAGGACCAATTAAAATTGACATGTGTCCCAAATTTAATTTGAAGACAAAGTTGGCCAATTATAAATTTAAAGAGTCAAATTTCTATTTGATCAATTAATTAGAAAATAAATTATTTTGATCAAATTAATTAATTTGACCAATTAATTAACAAAATAATTAATTGGATCAAATTTTGGTCTTTTAATATTTGGGTCATAAGGTTTTGGGTCAAATATGAACCAAACCCAAGACCAAATAGTTGAACCCAAGACCAAAAAGCCCACGCCCAAGTTGTTAGGCCCAAAAGTCTCCAGGGCTCATCCAGCGAGAACTCTATAAATAGGGGTTCTCCTCCATTTCAAGGGTTCAGAAATTCTACACTCTTACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGAACCAAAGGATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAGACTCTCTACAATTCATAAATTCAAGTGTTGAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTGGAAGATCAAATACTCTTCAGGACATCAACACTTCTTGAAGACTAAACACTCTTCAAGACTTCAACATTTCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGATTGAAGACTCCTTCAAGACTGGAAGACTTCAAGCTCCAAGAATCCATTGA

mRNA sequence

ATGGACAACTTAGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTTGTTGTTCCCGCTTCTTCAAGTTCGAAGGTTCTCACACGCTTCGTTGCAGTTCCTTCTCTTCAATTTCGAAGGTTCTCCGCTGCTGCAGTTCCTTCCTCAAAGTTTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGCTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCACTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCATTTCGCTTCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCCGCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCGAAGTTCGAAGGTTCTCACGCGCTTCATTGTAGCTTCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCTCCAAGTTCGAAGGTTCACGCACTTCGCTTCAGTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTTCGCTGTTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCATGCGCTCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCTCTGCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTTCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCTCTTTGCTGCAGTTCCTTCCTCCAAGATCGAGGGTTTTCCGCTACTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCACGTGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCATTGCAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTATGCTCGGTTGCGCTGCTGCGCTACTTCCTAAAGTCCAAGGAGCACGTCATGTCCTTGAACTCATGTTGAAAGATGTGGCGGCGGCAAAAGTTCAAGAAACATGTCCCAAAGTAAGGAACATGTCCATGGGTTCTCCTCCATTTCAAGGGTTCAGAAATTCTACACTCTTACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGAACCAAAGGATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAGACTCTCTACAATTCATAAATTCAAGTGTTGAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTGGAAGATCAAATACTCTTCAGGACATCAACACTTCTTGAAGACTAAACACTCTTCAAGACTTCAACATTTCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGATTGAAGACTCCTTCAAGACTGGAAGACTTCAAGCTCCAAGAATCCATTGA

Coding sequence (CDS)

ATGGACAACTTAGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTTGTTGTTCCCGCTTCTTCAAGTTCGAAGGTTCTCACACGCTTCGTTGCAGTTCCTTCTCTTCAATTTCGAAGGTTCTCCGCTGCTGCAGTTCCTTCCTCAAAGTTTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGCTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCACTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCATTTCGCTTCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCCGCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCGAAGTTCGAAGGTTCTCACGCGCTTCATTGTAGCTTCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCTCCAAGTTCGAAGGTTCACGCACTTCGCTTCAGTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTTCGCTGTTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCATGCGCTCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCTCTGCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTTCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCTCTTTGCTGCAGTTCCTTCCTCCAAGATCGAGGGTTTTCCGCTACTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCACGTGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCATTGCAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTATGCTCGGTTGCGCTGCTGCGCTACTTCCTAAAGTCCAAGGAGCACGTCATGTCCTTGAACTCATGTTGAAAGATGTGGCGGCGGCAAAAGTTCAAGAAACATGTCCCAAAGTAAGGAACATGTCCATGGGTTCTCCTCCATTTCAAGGGTTCAGAAATTCTACACTCTTACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGAACCAAAGGATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAGACTCTCTACAATTCATAAATTCAAGTGTTGAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTGGAAGATCAAATACTCTTCAGGACATCAACACTTCTTGAAGACTAAACACTCTTCAAGACTTCAACATTTCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGATTGAAGACTCCTTCAAGACTGGAAGACTTCAAGCTCCAAGAATCCATTGA

Protein sequence

MDNLEVKLFDEVNSDKKLQSSISSRMKRKFSVLINTEGSLKPQVRCFTHPKFVVPASSSSKVLTRFVAVPSLQFRRFSAAAVPSSKFEVPSSKFEGSHVLRCSSFLQVRRFSRASLQFLPPSSKVLTRFVAAPSLQGRRFSRTALQFFLPKFEGSRISLQFLLPNSKVLTRFVAVPSSKFEGSPLLQFLPPSLKVLTSLCCSSFLQVRRFSRASLQFLPRSSKVLTRFIVASSLQGRRFSRAALQFFLSKFEGSRTSLQSFSQIRRFSRASLQFLPPSLKVLRCCSSFLQVRRFSCALLQFLPPSLKVLTSLRCSSFLQVRRFSRASLQFLLSKVEGSHALRCSSFSPSSKVHALRFSSFSQIRRFSRSLLQFLPPRSRVFRYCSSFLQVRRFSRAPLQFLPPSLKVLTSLRCSSFLQVRRFSRASLQFLPPSSKVLTRFIAVPSSKFEGPHAMLGCAAALLPKVQGARHVLELMLKDVAAAKVQETCPKVRNMSMGSPPFQGFRNSTLLQRQEFRVSKLSSRTKGFRETPPSLKTEDSLQFINSSVEHFLKTKHSSRLQHSWKIKYSSGHQHFLKTKHSSRLQHFLKIKDSSGHQHFLKIEDSFKTGRLQAPRIH
Homology
[Close]
BLAST of Lag0011884 vs. NCBI nr
Match: KAE8606410.1 (hypothetical protein XENTR_v10010729 [Xenopus tropicalis])

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-09
Identity = 130/405 (32.10%), Postives = 185/405 (45.68%), Query Frame = 0 

Query: 118 FLPPSSKVLTRFVAAPSLQGRRF---SRTALQFFLPKFEGSRISLQFLLPNS-KVLTRFV 177
           FLP S + L  F+       +RF   S+ ALQ FLP   GS+ +LQ  LP S + L RF 
Sbjct: 218 FLPGSQRALQHFLPGSQRALQRFLPGSQRALQRFLP---GSQRALQRFLPGSQRALQRF- 277

Query: 178 AVPSSKFEGSPLLQFLPPSLKVLTSLCCSSFLQVRRF----SRASLQFLPRSSKVLTRFI 237
            +P+S+     L +FLP S + L      S   ++RF     RA  +FLP S + L RF+
Sbjct: 278 -LPASQ---RALQRFLPGSQRALQRFLPGSQRALQRFLPGSQRALQRFLPGSQRALQRFL 337

Query: 238 VASSLQGRRF---SRAALQFFLSKFEGSRTSLQSFSQIRRFSRASLQFLPPSLKVLRCCS 297
             S    +RF   S+ ALQ FL    GS+ +LQ F  +    RA  +FLP S + L+   
Sbjct: 338 PGSQRALQRFLPGSQRALQRFL---PGSQRALQRF--LPGSQRALQRFLPGSQRALQ--- 397

Query: 298 SFLQVRRFSCALLQFLPPSLKVLTSLRCSSFLQVRRFSRASLQFLLSKVEGSHALRCSSF 357
            FL   +   AL +FLP S + L      S   ++RF   S + L   + GS       F
Sbjct: 398 RFLPGSQ--RALQRFLPGSQRALQRFLPGSQRALQRFLPGSQRALQRFLPGSQR-ALQRF 457

Query: 358 SPSSKVHALRFSSFSQ--IRRF----SRSLLQFLPPRSRVFRYCSSFLQVRRFSRAPLQF 417
            P S+    RF   SQ  ++RF     R+L +FLP   R  +    FL   +  RA  +F
Sbjct: 458 LPGSQRALQRFLPGSQRALQRFLPGSQRALQRFLPGSQRALQ---RFLPGSQ--RALQRF 517

Query: 418 LPPSLKVLTSLRCSSFLQVRRF----SRASLQFLPPSSKVLTRFIAVPSSKFEGPHAMLG 477
           LP S + L      S   ++ F     RA  +FLP S + L RF+  P S+    H + G
Sbjct: 518 LPGSQRALQRFLPGSQRALQLFLPGSQRALQRFLPGSQRALQRFL--PGSQRALQHFLPG 577

Query: 478 CAAAL--LPKVQGARHVLELMLKDVAAAKVQETCPKVRNMSMGSP 500
              AL  LP +      L    +       Q+ C  ++ + +G P
Sbjct: 578 SQRALQQLPGLS-----LNCSSQQQNCHFPQQNCNSLQQLRLGHP 591

The following BLAST results are available for this feature:
BLAST of Lag0011884 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8606410.11.4e-0932.10hypothetical protein XENTR_v10010729 [Xenopus tropicalis][more]
BLAST of Lag0011884 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0011884 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0011884 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011884.1Lag0011884.1mRNA