Lag0011869 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011869
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr1: 34075003 .. 34076627 (-)
RNA-Seq ExpressionLag0011869
SyntenyLag0011869
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGTACTTCTGCTTTCCATAAAAGGTTTGAATATTGATACATCCATGGACATAAAACTTGTATTAATGATCAAGAGGTCTAAGGTTCAAATTTCCTACTCCACATGCTGTAAGAAAAAAAAAAAAAATTCGAACCTAAAGTTCGACATAACTCAATTTGTTAAGACATTGTGGAGATATTTGACTAAAAAGTTAGAGTTATGAAATATGGAGGTTGTTTTGTAAATTGAAGTATGAGTTAATAAGTTTGTGGTAATAAAAGATTGAAATTGATTAATAATTTTTTTTTGGCGATAATATGGGGGTGGGGATTCGAACCACAGACCTTATGATCATTAGTACAACTTTGTGTCAGAGCTATGCTCTTGTTGGCAAATTGATTAATAAGTTTGTGGGCCCCACAAGTTTGTTATATGTCCTTCGACCAAACAAAAATTTAACTCAACCCAACTCCTATTTCATAATAGAAGGCCATATTTTCTTAACTTTTCTTGGTCTATTTTTCTTTTTTTGTGGCTTATCTTTTCTGTTATTTTTTATCCTATTAGGGTTGTACATTTGTCGGCTACTTCTCTATATTTTTTAGGTTGTTGTGTCTCTGATACAGTACACTGAATATTGAGCTTCTTCACCTCACTATCGAGAGCTTTCTTCTCCCACTCTGTTTTCTCTGTATTCTTTATGGTGTCAGAGCTTTGCGACTTCACTCAACAATGGCATCTGAAGCGTCTTCTTCGTCTTCATCATCTGGACCGCTCACTCCATCCGTCCAAATCCCTCAACGCCGAACACCACACCCGTTGTGACTCCGATTACACAACGAGACAAAGCCCCAATACAGTCTTCATCTCAGCCGCAACCGACCATTCCTCAGACTCAACCTCGCCCAAACTTCTACCAATCGCAAGCTCCCTTCAACCCTTATCAGAATCAACCCTACTATCCTCTTCCATCCTCAACCTTCTTTCAACCATTTTACCCATCCTCGTTTTCGTGCCCTAATACCCAAATCCCTCAGTTCTTTCTTCCTCAGGCTTACCCAACGCTCCAGCCTCACAACCCTTTTACCCCCAATCCCTTCCCAACCTTGCCCCAACCCCTCACGGTCAAGCTATCTGATACAAATTTTTTATTATGGAAGAACCAACTTCTGAATGTTGTTCTCGCCAATGGATTGCACAGTTTTCTCGATGGCTCCATCCCAGCTCCTTCTCGTTTTCTTAACGATCAGAACACTCAACCAAATCCAGAATTCCTCACTTGGAAAAGGTACAATAGAGTTATAATGTGCTGGATGTACTCCTCTCTTTCTGAAGAAAAAATGGGTGAAATCGTAAGTTTATCTACTGCTTCTGAAATTTGGGATTCTTTAAAACGTGCCTATGATTCTAAGACTACTGCTAGAATAATGGGTCTTAAAACTCAGCTTCAATGTATTAGAAAAGATGGTCTCTCTGTTACTCAGTATCTTTCTCAAATTAAAGATATAGCTGATAAATTTTCTGCCATTGGAGAGCCTATTTCTTACGGGGATCACTTGGCTCACATTTTGGATGGATTAGGAAGTGAATACAATCCTTTTGTCACCTCCATTCAAAACCGGTCTGATAACCCGCTTTAG

mRNA sequence

ATGTTTGGTACTTCTGCTTTCCATAAAAGCGTCTTCTTCGTCTTCATCATCTGGACCGCTCACTCCATCCGTCCAAATCCCTCAACGCCGAACACCACACCCGTTGTGACTCCGATTACACAACGAGACAAAGCCCCAATACAGTCTTCATCTCAGCCGCAACCGACCATTCCTCAGACTCAACCTCGCCCAAACTTCTACCAATCGCAAGCTCCCTTCAACCCTTATCAGAATCAACCCTACTATCCTCTTCCATCCTCAACCTTCTTTCAACCATTTTACCCATCCTCGTTTTCGTGCCCTAATACCCAAATCCCTCAGTTCTTTCTTCCTCAGGCTTACCCAACGCTCCAGCCTCACAACCCTTTTACCCCCAATCCCTTCCCAACCTTGCCCCAACCCCTCACGGTCAAGCTATCTGATACAAATTTTTTATTATGGAAGAACCAACTTCTGAATGTTGTTCTCGCCAATGGATTGCACAGTTTTCTCGATGGCTCCATCCCAGCTCCTTCTCGTTTTCTTAACGATCAGAACACTCAACCAAATCCAGAATTCCTCACTTGGAAAAGGTACAATAGAGTTATAATGTGCTGGATGTACTCCTCTCTTTCTGAAGAAAAAATGGGTGAAATCGTAAGTTTATCTACTGCTTCTGAAATTTGGGATTCTTTAAAACGTGCCTATGATTCTAAGACTACTGCTAGAATAATGGGTCTTAAAACTCAGCTTCAATGTATTAGAAAAGATGGTCTCTCTGTTACTCAGTATCTTTCTCAAATTAAAGATATAGCTGATAAATTTTCTGCCATTGGAGAGCCTATTTCTTACGGGGATCACTTGGCTCACATTTTGGATGGATTAGGAAGTGAATACAATCCTTTTGTCACCTCCATTCAAAACCGGTCTGATAACCCGCTTTAG

Coding sequence (CDS)

ATGTTTGGTACTTCTGCTTTCCATAAAAGCGTCTTCTTCGTCTTCATCATCTGGACCGCTCACTCCATCCGTCCAAATCCCTCAACGCCGAACACCACACCCGTTGTGACTCCGATTACACAACGAGACAAAGCCCCAATACAGTCTTCATCTCAGCCGCAACCGACCATTCCTCAGACTCAACCTCGCCCAAACTTCTACCAATCGCAAGCTCCCTTCAACCCTTATCAGAATCAACCCTACTATCCTCTTCCATCCTCAACCTTCTTTCAACCATTTTACCCATCCTCGTTTTCGTGCCCTAATACCCAAATCCCTCAGTTCTTTCTTCCTCAGGCTTACCCAACGCTCCAGCCTCACAACCCTTTTACCCCCAATCCCTTCCCAACCTTGCCCCAACCCCTCACGGTCAAGCTATCTGATACAAATTTTTTATTATGGAAGAACCAACTTCTGAATGTTGTTCTCGCCAATGGATTGCACAGTTTTCTCGATGGCTCCATCCCAGCTCCTTCTCGTTTTCTTAACGATCAGAACACTCAACCAAATCCAGAATTCCTCACTTGGAAAAGGTACAATAGAGTTATAATGTGCTGGATGTACTCCTCTCTTTCTGAAGAAAAAATGGGTGAAATCGTAAGTTTATCTACTGCTTCTGAAATTTGGGATTCTTTAAAACGTGCCTATGATTCTAAGACTACTGCTAGAATAATGGGTCTTAAAACTCAGCTTCAATGTATTAGAAAAGATGGTCTCTCTGTTACTCAGTATCTTTCTCAAATTAAAGATATAGCTGATAAATTTTCTGCCATTGGAGAGCCTATTTCTTACGGGGATCACTTGGCTCACATTTTGGATGGATTAGGAAGTGAATACAATCCTTTTGTCACCTCCATTCAAAACCGGTCTGATAACCCGCTTTAG

Protein sequence

MFGTSAFHKSVFFVFIIWTAHSIRPNPSTPNTTPVVTPITQRDKAPIQSSSQPQPTIPQTQPRPNFYQSQAPFNPYQNQPYYPLPSSTFFQPFYPSSFSCPNTQIPQFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFLDGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDSLKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHILDGLGSEYNPFVTSIQNRSDNPL
Homology
BLAST of Lag0011869 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-75
Identity = 138/200 (69.00%), Postives = 164/200 (82.00%), Query Frame = 0

Query: 107 QFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFLDG 166
           QF  P      QP NPF+ NPFPTLPQPL VKL+D NFLLWKNQLLN V+ANGL  +LDG
Sbjct: 2   QFPPPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDG 61

Query: 167 SIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDSLK 226
           +I  P +FL+    QPNP +  W+RYNR++MCW+YSSLSEEKMGE+VSL T  +IW SL 
Sbjct: 62  TIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLT 121

Query: 227 RAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHILD 286
           R YDSKTTARIMGLKT+LQ +RKDG SV+QYL++IK+IADKF+A+GEP+SY DHLAH+LD
Sbjct: 122 RVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLD 181

Query: 287 GLGSEYNPFVTSIQNRSDNP 307
           GLGSEYN FVTSI NR+D+P
Sbjct: 182 GLGSEYNAFVTSIHNRADSP 201

BLAST of Lag0011869 vs. NCBI nr
Match: GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])

HSP 1 Score: 202.2 bits (513), Expect = 6.4e-48
Identity = 93/202 (46.04%), Postives = 142/202 (70.30%), Query Frame = 0

Query: 105 IPQFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFL 164
           +P   +P   P +   +P  PN  P++ QPL VKL D N+++WK QLLN+V+ANGL  FL
Sbjct: 23  LPSSSIPNPNPQILNTSPL-PN-MPSINQPLAVKLDDHNYIIWKEQLLNIVIANGLEEFL 82

Query: 165 DGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDS 224
           DGS   P RFL+ Q  Q NPEF +W+RYNR++M W+Y+S++E  +G+IV  ++AS+IW++
Sbjct: 83  DGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEA 142

Query: 225 LKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHI 284
           L+R Y + + A +  L+T LQ I+K+GL+   Y+ + + + +  ++IGEP++Y DHL + 
Sbjct: 143 LERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYF 202

Query: 285 LDGLGSEYNPFVTSIQNRSDNP 307
           L GLG +YNPFVTSIQ+++  P
Sbjct: 203 LGGLGRDYNPFVTSIQSQAIRP 222

BLAST of Lag0011869 vs. NCBI nr
Match: GFZ12741.1 (UBX domain-containing protein [Actinidia rufa])

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-47
Identity = 99/221 (44.80%), Postives = 148/221 (66.97%), Query Frame = 0

Query: 86  SSTFFQPFYPSSFSCPNTQIPQFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFL 145
           SST   P  P+S   P++ IP+       P  Q  N       P++ QPL VKL D N++
Sbjct: 9   SSTPPAPPPPTSNPLPSSSIPK-------PNPQIINTSPLLNMPSINQPLAVKLDDHNYI 68

Query: 146 LWKNQLLNVVLANGLHSFLDGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLS 205
           +WK QLLN+V+ANGL  FLDGS   P RFL+ Q  Q NPEF +W+RYNR++M W+Y+S++
Sbjct: 69  IWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASIN 128

Query: 206 EEKMGEIVSLSTASEIWDSLKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIA 265
           E  +G+IV  ++AS+IW++L+R Y + + A +  L+T LQ I+K+GL+   Y+ + + + 
Sbjct: 129 ESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLC 188

Query: 266 DKFSAIGEPISYGDHLAHILDGLGSEYNPFVTSIQNRSDNP 307
           +  ++IGEP++Y DHL + L GLG +YNPFVTSIQ+++  P
Sbjct: 189 NSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRP 222

BLAST of Lag0011869 vs. NCBI nr
Match: PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale])

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-44
Identity = 94/208 (45.19%), Postives = 135/208 (64.90%), Query Frame = 0

Query: 101 PNTQIPQFFLPQAYPTLQPHNPFTPNPFPTLP---QPLTVKLSDTNFLLWKNQLLNVVLA 160
           P  Q+P   +P     +    P  P P P LP   QP T+KL   N+L+WKNQLLNV++A
Sbjct: 16  PTIQMPPTNIPNVQDQIIGAQPPLP-PLPILPSMNQPFTIKLDADNYLIWKNQLLNVIIA 75

Query: 161 NGLHSFLDGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLST 220
           NGL  F+DGS P P RF +      N E++ W+R+NR+IM W+Y+SL++  MG+IV  ++
Sbjct: 76  NGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMGQIVGYAS 135

Query: 221 ASEIWDSLKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISY 280
           A EIW++L + Y S + A+I  L+ +LQ +RKDGL+  +Y+ + K+I +  +A+GEP+S 
Sbjct: 136 AFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAAVGEPVSC 195

Query: 281 GDHLAHILDGLGSEYNPFVTSIQNRSDN 306
            DHL ++  GL  EYN FVTSI  R DN
Sbjct: 196 KDHLLYLFGGLDREYNAFVTSITKRPDN 222

BLAST of Lag0011869 vs. NCBI nr
Match: RVW69807.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-42
Identity = 89/180 (49.44%), Postives = 127/180 (70.56%), Query Frame = 0

Query: 127 PFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFLDGSIPAPSRFLNDQNTQPNPEF 186
           P P+L Q L++KL +TN LL K+QLLNV++ANGL  F+D    +P ++L+    Q NPEF
Sbjct: 32  PSPSLSQSLSIKLDETNLLLRKSQLLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEF 91

Query: 187 LTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDSLKRAYDSKTTARIMGLKTQLQC 246
           + W R N+++M W+YSSL+   +G+IV  STA +IW SL   Y+S + A +M L +QLQ 
Sbjct: 92  VQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQR 151

Query: 247 IRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHILDGLGSEYNPFVTSIQNRSDNP 306
           I+K  + +++YLS++K + D+F+ IGEP+SY D L  IL+GL  EY+ FVTSI NRSD P
Sbjct: 152 IKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRP 211

BLAST of Lag0011869 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.1e-17
Identity = 44/170 (25.88%), Postives = 88/170 (51.76%), Query Frame = 0

Query: 138 KLSDTNFLLWKNQLLNVVLANGLHSFLDGSIPAPSRFL-NDQNTQPNPEFLTWKRYNRVI 197
           KL+ TN+L+W  Q+  +     L  FLDGS   P   +  D   + NP++  WKR +++I
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 198 MCWMYSSLSEEKMGEIVSLSTASEIWDSLKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQ 257
              +  ++S      +   +TA++IW++L++ Y + +   +  L+TQL+   K   ++  
Sbjct: 85  YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 258 YLSQIKDIADKFSAIGEPISYGDHLAHILDGLGSEYNPFVTSIQNRSDNP 307
           Y+  +    D+ + +G+P+ + + +  +L+ L  EY P +  I  +   P
Sbjct: 145 YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPP 194

BLAST of Lag0011869 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 138/200 (69.00%), Postives = 164/200 (82.00%), Query Frame = 0

Query: 107 QFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFLDG 166
           QF  P      QP NPF+ NPFPTLPQPL VKL+D NFLLWKNQLLN V+ANGL  +LDG
Sbjct: 2   QFPPPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDG 61

Query: 167 SIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDSLK 226
           +I  P +FL+    QPNP +  W+RYNR++MCW+YSSLSEEKMGE+VSL T  +IW SL 
Sbjct: 62  TIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLT 121

Query: 227 RAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHILD 286
           R YDSKTTARIMGLKT+LQ +RKDG SV+QYL++IK+IADKF+A+GEP+SY DHLAH+LD
Sbjct: 122 RVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLD 181

Query: 287 GLGSEYNPFVTSIQNRSDNP 307
           GLGSEYN FVTSI NR+D+P
Sbjct: 182 GLGSEYNAFVTSIHNRADSP 201

BLAST of Lag0011869 vs. ExPASy TrEMBL
Match: A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.1e-48
Identity = 93/202 (46.04%), Postives = 142/202 (70.30%), Query Frame = 0

Query: 105 IPQFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFL 164
           +P   +P   P +   +P  PN  P++ QPL VKL D N+++WK QLLN+V+ANGL  FL
Sbjct: 23  LPSSSIPNPNPQILNTSPL-PN-MPSINQPLAVKLDDHNYIIWKEQLLNIVIANGLEEFL 82

Query: 165 DGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDS 224
           DGS   P RFL+ Q  Q NPEF +W+RYNR++M W+Y+S++E  +G+IV  ++AS+IW++
Sbjct: 83  DGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEA 142

Query: 225 LKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHI 284
           L+R Y + + A +  L+T LQ I+K+GL+   Y+ + + + +  ++IGEP++Y DHL + 
Sbjct: 143 LERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYF 202

Query: 285 LDGLGSEYNPFVTSIQNRSDNP 307
           L GLG +YNPFVTSIQ+++  P
Sbjct: 203 LGGLGRDYNPFVTSIQSQAIRP 222

BLAST of Lag0011869 vs. ExPASy TrEMBL
Match: A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.0e-48
Identity = 99/221 (44.80%), Postives = 148/221 (66.97%), Query Frame = 0

Query: 86  SSTFFQPFYPSSFSCPNTQIPQFFLPQAYPTLQPHNPFTPNPFPTLPQPLTVKLSDTNFL 145
           SST   P  P+S   P++ IP+       P  Q  N       P++ QPL VKL D N++
Sbjct: 9   SSTPPAPPPPTSNPLPSSSIPK-------PNPQIINTSPLLNMPSINQPLAVKLDDHNYI 68

Query: 146 LWKNQLLNVVLANGLHSFLDGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLS 205
           +WK QLLN+V+ANGL  FLDGS   P RFL+ Q  Q NPEF +W+RYNR++M W+Y+S++
Sbjct: 69  IWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASIN 128

Query: 206 EEKMGEIVSLSTASEIWDSLKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIA 265
           E  +G+IV  ++AS+IW++L+R Y + + A +  L+T LQ I+K+GL+   Y+ + + + 
Sbjct: 129 ESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLC 188

Query: 266 DKFSAIGEPISYGDHLAHILDGLGSEYNPFVTSIQNRSDNP 307
           +  ++IGEP++Y DHL + L GLG +YNPFVTSIQ+++  P
Sbjct: 189 NSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRP 222

BLAST of Lag0011869 vs. ExPASy TrEMBL
Match: A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-45
Identity = 94/208 (45.19%), Postives = 135/208 (64.90%), Query Frame = 0

Query: 101 PNTQIPQFFLPQAYPTLQPHNPFTPNPFPTLP---QPLTVKLSDTNFLLWKNQLLNVVLA 160
           P  Q+P   +P     +    P  P P P LP   QP T+KL   N+L+WKNQLLNV++A
Sbjct: 16  PTIQMPPTNIPNVQDQIIGAQPPLP-PLPILPSMNQPFTIKLDADNYLIWKNQLLNVIIA 75

Query: 161 NGLHSFLDGSIPAPSRFLNDQNTQPNPEFLTWKRYNRVIMCWMYSSLSEEKMGEIVSLST 220
           NGL  F+DGS P P RF +      N E++ W+R+NR+IM W+Y+SL++  MG+IV  ++
Sbjct: 76  NGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMGQIVGYAS 135

Query: 221 ASEIWDSLKRAYDSKTTARIMGLKTQLQCIRKDGLSVTQYLSQIKDIADKFSAIGEPISY 280
           A EIW++L + Y S + A+I  L+ +LQ +RKDGL+  +Y+ + K+I +  +A+GEP+S 
Sbjct: 136 AFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAAVGEPVSC 195

Query: 281 GDHLAHILDGLGSEYNPFVTSIQNRSDN 306
            DHL ++  GL  EYN FVTSI  R DN
Sbjct: 196 KDHLLYLFGGLDREYNAFVTSITKRPDN 222

BLAST of Lag0011869 vs. ExPASy TrEMBL
Match: A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.7e-43
Identity = 89/180 (49.44%), Postives = 127/180 (70.56%), Query Frame = 0

Query: 127 PFPTLPQPLTVKLSDTNFLLWKNQLLNVVLANGLHSFLDGSIPAPSRFLNDQNTQPNPEF 186
           P P+L Q L++KL +TN LL K+QLLNV++ANGL  F+D    +P ++L+    Q NPEF
Sbjct: 32  PSPSLSQSLSIKLDETNLLLRKSQLLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEF 91

Query: 187 LTWKRYNRVIMCWMYSSLSEEKMGEIVSLSTASEIWDSLKRAYDSKTTARIMGLKTQLQC 246
           + W R N+++M W+YSSL+   +G+IV  STA +IW SL   Y+S + A +M L +QLQ 
Sbjct: 92  VQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQR 151

Query: 247 IRKDGLSVTQYLSQIKDIADKFSAIGEPISYGDHLAHILDGLGSEYNPFVTSIQNRSDNP 306
           I+K  + +++YLS++K + D+F+ IGEP+SY D L  IL+GL  EY+ FVTSI NRSD P
Sbjct: 152 IKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRP 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155181.13.6e-7569.00uncharacterized protein LOC111022315 [Momordica charantia][more]
GFY85402.16.4e-4846.04hypothetical protein Acr_04g0001400 [Actinidia rufa][more]
GFZ12741.11.9e-4744.80UBX domain-containing protein [Actinidia rufa][more]
PON47862.11.5e-4445.19hypothetical protein TorRG33x02_321990 [Trema orientale][more]
RVW69807.11.4e-4249.44Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Q94HW26.1e-1725.88Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A6J1DQX71.7e-7569.00uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A7J0EGI53.1e-4846.04Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1[more]
A0A7J0GPN09.0e-4844.80UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4... [more]
A0A2P5BGF87.1e-4545.19Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV... [more]
A0A438GC626.7e-4349.44Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 189..306
e-value: 1.1E-19
score: 70.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..70
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 127..306
NoneNo IPR availablePANTHERPTHR47481:SF3GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATEDcoord: 127..306

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011869.1Lag0011869.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding