Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAACGCCTCTTTGACCAATGCAACTTCGTCTGTTGTTACTGGAGCTGGAAATTTTAGCAGCCCTCCACTTAACCAGCTACTGAATCAAATCACCTCCATCAAGCTAGATCGAGGGGACGATCTTCTCTGGAAGAACATTGCAATGTCAATCCTCCGAGGCTACAAACTTGAAGGACACCTATTAGGCACGAAAGAATGCCCTCATATGTTCGTTCAACAAGTCGATGAATCAGCCAATCCGCCCACAACCACTGTAGTGGAAGTAGCTAGAGCATCAAGCTCAAGAACAGCAGTTAGCGGAGCTGCCTCCTCTGAATCGAGAGTTGTCACAAATCCCCAATATGAAGCTTGGGCAGCAGTCGATCAATTGCTACTTGGATGGCTCTACAACTCTATGACTCCGGAAGTTGCAACTCAAGTTATGGGAGTCGAAAATGCAAATGACCTGTGGATAGAAATTCAAGAGTTGTTCGGAGTTCAATCGAGAGCTGAAGAAGATTTCCTTCGTCAAACTTTTCAACAAACCAGAAACGGTAAAATGAAAATGGCGGAATATTTAAGAATTATGAAGAATCATCCTGATAATCTAGGCTTGGTTGGTAGTCCTATCTCAAATAGAAATCTAGTTTCATAAGTCTTGTTAGGTCTTGATGAAGAATAAAATGTTATTGTTGCAATGGTGCAAGGAAGAGAAAATGTGTCTTGGTCTGAATTGCAGGCTGAATTGTTGGTTTTTGAAAAGAGATTGGAGCTTCAAAATTCTCACAAAAGCTCGGTAACATTCAATCATAATGCCACGACCAACATGACAACTAGTAAAACAACAAGCTCTCCCAAGCAGACTAATCTGAGCAATACTCCTAGACAGGGATTCTACAATGGTCAGCATGGAAATGGAAATAGAAGTCGAGGGAGAGGACGTGACTACAACAACTACAACAATAGACCTACTTGTCAAGTCTGTGGGAAGGTAGGCCATTCAACATTGGTTTGTTATCATAGATTTGATAAAGAATTTTCACCTATACAGAACATGAGCAATGGAAATGGGAACTATCCACCAAACCGAGGAAATGGAAATGGCCAACAACATACAAATGTATTCATGACAACCCAAAAGACAGCCATCCCAGAGACTTTAGTCGATCCTAATTGGTATGCAGACAGTAGTGCCTCTAACCACTTCACGAGAAGCTATGAAAATTTCAACAACCCGACTGAGTATGGAGGTAATGACTATGTTACTATAGGAAATGGTGATAAGCTACCCATTACATGTGTTGGATCAACTAGTTTAAGTGATGGTCATCATGTCTTACAACTTGAAAATGTCTTGTGCGTACCTGAAATTGCCAAAAATTTAGTAAGCTTGTCGAGGTTAGCTCAAGATAATAATGTGTATATTGAGTTTCATGAGAAGTTTTGTCTTGTTAAGGACAAGAGTACGGGACGTGTGGTGCTGAAAGGAACACTTAAAGATGGACTCTATCAACTACATGATGCTCAGCCAAGGATTTCAAAAGTTTCCAGGTGTTCGCAGCTCATTGATAGTTCAGTGTTAGTCGTGTCTAGTGTATTTCCTACTGTTAATGTTGATGTATCTAGGCACATATGGCATAGGCGCTTGGGTCATCCAACCACTAAAGTTTTGGATTTCATAGTTCAAAGTTGTAGTTTTTCAATTAAAGGAAATGAGAAGAATTTGTTTTGTGAGTCATGTCAATTTGGTAAGTCACATGCTCTTGCATTTCCTGTAGGAGTGGAATTTCATAATCTGTTAAGCAGAAGCGAAATTGGGACTGATTCGTAG
mRNA sequence
ATGGCAAACGCCTCTTTGACCAATGCAACTTCGTCTGTTGTTACTGGAGCTGGAAATTTTAGCAGCCCTCCACTTAACCAGCTACTGAATCAAATCACCTCCATCAAGCTAGATCGAGGGGACGATCTTCTCTGGAAGAACATTGCAATGTCAATCCTCCGAGGCTACAAACTTGAAGGACACCTATTAGGCACGAAAGAATGCCCTCATATGTTCGTTCAACAAGTCGATGAATCAGCCAATCCGCCCACAACCACTGTAGTGGAAGTAGCTAGAGCATCAAGCTCAAGAACAGCAGTTAGCGGAGCTGCCTCCTCTGAATCGAGAGTTGTCACAAATCCCCAATATGAAGCTTGGGCAGCAGTCGATCAATTGCTACTTGGATGGCTCTACAACTCTATGACTCCGGAAGTTGCAACTCAAGTTATGGGAGTCGAAAATGCAAATGACCTGTGGATAGAAATTCAAGAGTTGTTCGGAGTTCAATCGAGAGCTGAAGAAGATTTCCTTCGTCAAACTTTTCAACAAACCAGAAACGGTAAAATGAAAATGGCGGAATATTTAAGAATTATGAAGAATCATCCTGATAATCTAGGCTTGGCTGAATTGTTGGTTTTTGAAAAGAGATTGGAGCTTCAAAATTCTCACAAAAGCTCGGTAACATTCAATCATAATGCCACGACCAACATGACAACTAGTAAAACAACAAGCTCTCCCAAGCAGACTAATCTGAGCAATACTCCTAGACAGGGATTCTACAATGGTCAGCATGGAAATGGAAATAGAAGTCGAGGGAGAGGACGTGACTACAACAACTACAACAATAGACCTACTTGTCAAGTCTGTGGGAAGGTAGGCCATTCAACATTGGTTTGTTATCATAGATTTGATAAAGAATTTTCACCTATACAGAACATGAGCAATGGAAATGGGAACTATCCACCAAACCGAGGAAATGGAAATGGCCAACAACATACAAATGTATTCATGACAACCCAAAAGACAGCCATCCCAGAGACTTTAGTCGATCCTAATTGGTATGCAGACAGTAGTGCCTCTAACCACTTCACGAGAAGCTATGAAAATTTCAACAACCCGACTGAGTATGGAGGTAATGACTATGTTACTATAGGAAATGGTGATAAGCTACCCATTACATGTGTTGGATCAACTAGTTTAAGTGATGGTCATCATGTCTTACAACTTGAAAATGTCTTGTGCGTACCTGAAATTGCCAAAAATTTAGTAAGCTTGTCGAGGTTAGCTCAAGATAATAATGTGTATATTGAGTTTCATGAGAAGTTTTGTCTTGTTAAGGACAAGAGTACGGGACGTGTGGTGCTGAAAGGAACACTTAAAGATGGACTCTATCAACTACATGATGCTCAGCCAAGGATTTCAAAAGTTTCCAGGTGTTCGCAGCTCATTGATAGTTCAGTGTTAGTCGTGTCTAGTGTATTTCCTACTGTTAATGTTGATGTATCTAGGCACATATGGCATAGGCGCTTGGGTCATCCAACCACTAAAGTTTTGGATTTCATAGTTCAAAGTTGTAGTTTTTCAATTAAAGGAAATGAGAAGAATTTGTTTTGTGAGTCATGTCAATTTGGTAAGTCACATGCTCTTGCATTTCCTGTAGGAGTGGAATTTCATAATCTGTTAAGCAGAAGCGAAATTGGGACTGATTCGTAG
Coding sequence (CDS)
ATGGCAAACGCCTCTTTGACCAATGCAACTTCGTCTGTTGTTACTGGAGCTGGAAATTTTAGCAGCCCTCCACTTAACCAGCTACTGAATCAAATCACCTCCATCAAGCTAGATCGAGGGGACGATCTTCTCTGGAAGAACATTGCAATGTCAATCCTCCGAGGCTACAAACTTGAAGGACACCTATTAGGCACGAAAGAATGCCCTCATATGTTCGTTCAACAAGTCGATGAATCAGCCAATCCGCCCACAACCACTGTAGTGGAAGTAGCTAGAGCATCAAGCTCAAGAACAGCAGTTAGCGGAGCTGCCTCCTCTGAATCGAGAGTTGTCACAAATCCCCAATATGAAGCTTGGGCAGCAGTCGATCAATTGCTACTTGGATGGCTCTACAACTCTATGACTCCGGAAGTTGCAACTCAAGTTATGGGAGTCGAAAATGCAAATGACCTGTGGATAGAAATTCAAGAGTTGTTCGGAGTTCAATCGAGAGCTGAAGAAGATTTCCTTCGTCAAACTTTTCAACAAACCAGAAACGGTAAAATGAAAATGGCGGAATATTTAAGAATTATGAAGAATCATCCTGATAATCTAGGCTTGGCTGAATTGTTGGTTTTTGAAAAGAGATTGGAGCTTCAAAATTCTCACAAAAGCTCGGTAACATTCAATCATAATGCCACGACCAACATGACAACTAGTAAAACAACAAGCTCTCCCAAGCAGACTAATCTGAGCAATACTCCTAGACAGGGATTCTACAATGGTCAGCATGGAAATGGAAATAGAAGTCGAGGGAGAGGACGTGACTACAACAACTACAACAATAGACCTACTTGTCAAGTCTGTGGGAAGGTAGGCCATTCAACATTGGTTTGTTATCATAGATTTGATAAAGAATTTTCACCTATACAGAACATGAGCAATGGAAATGGGAACTATCCACCAAACCGAGGAAATGGAAATGGCCAACAACATACAAATGTATTCATGACAACCCAAAAGACAGCCATCCCAGAGACTTTAGTCGATCCTAATTGGTATGCAGACAGTAGTGCCTCTAACCACTTCACGAGAAGCTATGAAAATTTCAACAACCCGACTGAGTATGGAGGTAATGACTATGTTACTATAGGAAATGGTGATAAGCTACCCATTACATGTGTTGGATCAACTAGTTTAAGTGATGGTCATCATGTCTTACAACTTGAAAATGTCTTGTGCGTACCTGAAATTGCCAAAAATTTAGTAAGCTTGTCGAGGTTAGCTCAAGATAATAATGTGTATATTGAGTTTCATGAGAAGTTTTGTCTTGTTAAGGACAAGAGTACGGGACGTGTGGTGCTGAAAGGAACACTTAAAGATGGACTCTATCAACTACATGATGCTCAGCCAAGGATTTCAAAAGTTTCCAGGTGTTCGCAGCTCATTGATAGTTCAGTGTTAGTCGTGTCTAGTGTATTTCCTACTGTTAATGTTGATGTATCTAGGCACATATGGCATAGGCGCTTGGGTCATCCAACCACTAAAGTTTTGGATTTCATAGTTCAAAGTTGTAGTTTTTCAATTAAAGGAAATGAGAAGAATTTGTTTTGTGAGTCATGTCAATTTGGTAAGTCACATGCTCTTGCATTTCCTGTAGGAGTGGAATTTCATAATCTGTTAAGCAGAAGCGAAATTGGGACTGATTCGTAG
Protein sequence
MANASLTNATSSVVTGAGNFSSPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNGKMKMAEYLRIMKNHPDNLGLAELLVFEKRLELQNSHKSSVTFNHNATTNMTTSKTTSSPKQTNLSNTPRQGFYNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRFDKEFSPIQNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWYADSSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLCVPEIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQLHDAQPRISKVSRCSQLIDSSVLVVSSVFPTVNVDVSRHIWHRRLGHPTTKVLDFIVQSCSFSIKGNEKNLFCESCQFGKSHALAFPVGVEFHNLLSRSEIGTDS
Homology
BLAST of Lag0011805 vs. NCBI nr
Match:
XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])
HSP 1 Score: 367.9 bits (943), Expect = 1.6e-97
Identity = 222/456 (48.68%), Postives = 288/456 (63.16%), Query Frame = 0
Query: 1 MANASLTNATSSVVTGAGNFSSPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEG 60
MANA T A S+ + FS+PPLNQ+LNQ+T++KLDR + LLWK +A+ IL+ YKLEG
Sbjct: 1 MANAQPTAAPPSL--SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEG 60
Query: 61 HLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWA 120
HL CP FV SA+ TTV E A GA+SS + + NP +E W
Sbjct: 61 HLTAETPCPSHFVL----SASSSNTTVTE-----EGADATIGASSSITPRIVNPLFEQWV 120
Query: 121 AVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNG 180
D LLLGWLYNSMTP+VA Q+MG N DLW Q+ FGVQSRAEEDFLRQ Q TR G
Sbjct: 121 TTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG 180
Query: 181 KMKMAE-YLRIMKNHPDNLGL---AELLVFEKRLELQNSHKSSVTFNHNATTNMTTSKTT 240
++ + +++ PD L ++LL+FEKRL+ QN+ K + T N + + ++
Sbjct: 181 LDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKN-TGNITQSPALNMAQRF 240
Query: 241 SSPKQTNLSNTPRQGFYNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRF 300
+ Q N SN G YN QH +G R N NN PTCQ+CGK GHS LVCY+RF
Sbjct: 241 ALNGQRNQSNKKFYG-YNRQHFSGQR--------GNLNNGPTCQLCGKYGHSALVCYNRF 300
Query: 301 DKEF-SPI---QNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKT---AIPETLVDPNWYAD 360
+KEF SP+ +N + NG+ PN VF++TQ A P+T+VDPNWY D
Sbjct: 301 NKEFSSPLVQNRNEHSSNGSVSPNPA---------VFVSTQNATPFATPDTVVDPNWYID 360
Query: 361 SSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLCVP 420
S A+NH TR N NPTEY G + VT+GNG++L I+ VG+T L+DG L L+N+LCVP
Sbjct: 361 SGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVP 420
Query: 421 EIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGR 446
+IAKNL+S+S+LAQDN++YIEFH C +KDKSTG+
Sbjct: 421 DIAKNLISVSKLAQDNHIYIEFHGYCCFIKDKSTGK 426
BLAST of Lag0011805 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 295.4 bits (755), Expect = 1.0e-75
Identity = 214/575 (37.22%), Postives = 288/575 (50.09%), Query Frame = 0
Query: 1 MANASLTNATSSVVTGAGNFSSPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEG 60
++N T V F+SPPLNQLLNQITSIK+DRG+ LLW+N+A+ ILR YKL
Sbjct: 3 ISNLPTPIVTPPAVVSGAVFTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFD 62
Query: 61 HLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWA 120
+L G K C PPT V + + T + G+ SS+S NP YEAW
Sbjct: 63 YLTGDKPC-------------PPTHLV-----PTDTPTNIEGSTSSQSSPTLNPTYEAWI 122
Query: 121 AVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNG 180
VD+LLLGWLYNSM +VA QVMG + +LW +QELFGVQSRAE D+L+Q FQQT G
Sbjct: 123 VVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKG 182
Query: 181 KMKMAEYLRIMKNHPDNLGL---------------------------------------- 240
++M EYL++MK+H DNL L
Sbjct: 183 SLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEM 242
Query: 241 -AELLVFEKRLELQNSHKSSVTFNHNATTNMT--------TSKTTSSPKQTNLSNTPRQG 300
AELL +EKRLE QNS KS + N T ++ T++ T++ ++ SNT R G
Sbjct: 243 HAELLTYEKRLEYQNSLKSGIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHGSNTHRGG 302
Query: 301 FYNGQHGN-GNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRFDKEFSPIQNMSNGN 360
Y Q G+ G R+RGRG + N F+P SN
Sbjct: 303 GY--QRGSFGQRNRGRGPQPTQHKN------------------------FTP----SNSG 362
Query: 361 GNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWYADSSASNHFTRSYENFNNPTEYG 420
N HT+ +TT PET++DP+WYADS A++H T + N +Y
Sbjct: 363 PNV-------FAAHHTSTTVTT-----PETVIDPSWYADSGATSHVTANPNNVEQKVDYS 422
Query: 421 GNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLCVPEIAKNLVSLSRLAQDNNVYIE 480
G + V + NG+KL I+ +GST++ L+L++VL VP+IAKNL
Sbjct: 423 GTENVIVANGNKLSISHIGSTNIHASGGSLKLKDVLRVPDIAKNL--------------- 482
Query: 481 FHEKFCLVKDKSTGRVVLKGTLKDGLYQLH------DAQPRISKVSRCSQLIDSSVLVVS 512
DK++GR +LKGTLKD LY+L A P ++ ++ S +S
Sbjct: 483 ---------DKASGRTLLKGTLKDNLYRLDRSHRSPPATPTLTAPLFAHTVVSLSNNTLS 493
BLAST of Lag0011805 vs. NCBI nr
Match:
PNX94503.1 (putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense])
HSP 1 Score: 295.0 bits (754), Expect = 1.3e-75
Identity = 190/557 (34.11%), Postives = 265/557 (47.58%), Query Frame = 0
Query: 29 LNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLGTKECPHMFVQQVDESANPPTTTVV 88
L S+KLDR + LWK++ + ++RG K +G++LGTK+CP FV +D +
Sbjct: 12 LPSTVSVKLDRDNFPLWKSLVLPLIRGCKYDGYMLGTKKCPDQFVTSIDNTEK------- 71
Query: 89 EVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQLLLGWLYNSMTPEVATQVMGVENA 148
NP Y+ W A DQ LLGWL NSMT ++ATQV+ E +
Sbjct: 72 -----------------------INPDYQDWQADDQALLGWLMNSMTVDIATQVLHCETS 131
Query: 149 NDLWIEIQELFGVQSRAEEDFLRQTFQQTRNGKMKMAEYLRIMKNHPDNLGL-------- 208
LW E Q L G +R+ +L+ F T +MKM +YL MKN D L L
Sbjct: 132 KQLWDEAQSLAGAHTRSRIIYLKSEFHNTHKREMKMEQYLAKMKNLADKLKLAGSPISSS 191
Query: 209 ---------------------------------AELLVFEKRLELQNSHKSSVTFNHNAT 268
A+LL FE RL+ N+ FN+
Sbjct: 192 DLMIQTLNGLDSEYNPVVVKLSDQTNISWVDFQAQLLAFESRLDQLNN------FNN--- 251
Query: 269 TNMTTSKTTSSPKQTNLSNTPRQGFYNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGH 328
N+ S +S ++ + +G + G + G R GRGR + RP CQ+CGK GH
Sbjct: 252 INLNASANFASKNESGGNKFGSRGGWRGSNSRGMRG-GRGRARMSKPPRPICQICGKFGH 311
Query: 329 STLVCYHRFDKEFSPIQNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWY 388
+ CY+RFDK ++ + + G G++ + A P D WY
Sbjct: 312 TAAQCYYRFDKSYTEKNHYAEGEGSH------------------SAFVASPYHGQDYEWY 371
Query: 389 ADSSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLC 448
DS ASNH T + E G + + +GNG+KL I GST L+D + L NVL
Sbjct: 372 FDSGASNHVTHQSGQLQDLNENNGKNSLLVGNGEKLKILASGSTKLND----VNLRNVLY 431
Query: 449 VPEIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQLHDAQPRIS 508
VPEI KNL+S+S+L DNN +EF E +C VKDK TG+ +LKG LKDGLYQL + +
Sbjct: 432 VPEITKNLLSVSKLTIDNNALVEFDENYCYVKDKLTGKALLKGRLKDGLYQLSANKEPPT 488
Query: 509 KVSRCSQLIDSSVLVVSSVFPTVNVDVSRHIWHRRLGHPTTKVLDFIVQSCSFSIKGNEK 545
C+ + + IWHR+LGHP KVL+ +++ + I ++K
Sbjct: 492 NKDPCAYI------------------SLKEIWHRKLGHPNNKVLEKVLKDNNVKISPSDK 488
BLAST of Lag0011805 vs. NCBI nr
Match:
PNX76291.1 (gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense])
HSP 1 Score: 293.5 bits (750), Expect = 3.9e-75
Identity = 196/563 (34.81%), Postives = 273/563 (48.49%), Query Frame = 0
Query: 29 LNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLGTKECPHMFVQQVDESANPPTTTVV 88
L S+KLDR + LW+++ + I+RG +L+G++LG K+CP F+ D S
Sbjct: 13 LPSTVSVKLDRDNYPLWQSMVLPIIRGARLDGYMLGKKKCPEEFITAADSSKK------- 72
Query: 89 EVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQLLLGWLYNSMTPEVATQVMGVENA 148
NP++E W A DQ LLGWL NSMT +ATQ++ E +
Sbjct: 73 -----------------------FNPEFEDWQAYDQQLLGWLRNSMTVGIATQLLHCETS 132
Query: 149 NDLWIEIQELFGVQSRAEEDFLRQTFQQTRNGKMKMAEYLRIMKNHPDNLGL-------- 208
LW E Q L G +R++ +L+ F TR G+MKM +YL MKN D L L
Sbjct: 133 MQLWDEAQSLAGAHTRSQITYLKSEFHSTRKGEMKMEDYLIKMKNLADKLKLAGNPISTS 192
Query: 209 ---------------------------------AELLVFEKRLELQNSHKSSVTFNHNAT 268
A+LL FE R+E NS N T
Sbjct: 193 DLIIQTLNGLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFENRIEQLNSLT-------NLT 252
Query: 269 TNMTTSKTTSSPKQTNL--SNTPRQGFYNGQHGNGNR----SRGRGRDYNNYNNRPTCQV 328
N T + S + N SN +G N G+ R RGRGR + + TCQV
Sbjct: 253 LNATANVAKKSDHRGNRFNSNNNWRGSNNNWRGSNFRGWRGGRGRGRSF-----KTTCQV 312
Query: 329 CGKVGHSTLVCYHRFDKEFSPIQNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETL 388
CG H + C++RFDK +S SN + N + Q N F+ +Q ++
Sbjct: 313 CGLDNHIAIDCFYRFDKTYS----RSN-------HSANNDKQGSHNAFLASQ-----NSI 372
Query: 389 VDPNWYADSSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQ 448
D +WY DS ASNH T + F N +E+ G + + +GNG+KL I GS+ L L
Sbjct: 373 EDYDWYFDSGASNHVTHQTDKFQNLSEHHGKNSLIVGNGEKLEIVATGSSKLKS----LN 432
Query: 449 LENVLCVPEIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQLHD 508
L ++L VP+I KNL+S+S+LA DNN+ +EF E C VKDK TG+ +L+G LKDGLYQL +
Sbjct: 433 LHDILYVPKITKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKAILRGILKDGLYQLSE 488
Query: 509 AQPRISKVSRCSQLIDSSVLVVSSVFPTVNVDVSRHIWHRRLGHPTTKVLDFIVQSCSFS 545
DSS V + WHR+LGHP KVLD +++SC+
Sbjct: 493 K--------------DSSAYV-----------SIKESWHRKLGHPNNKVLDIVLKSCNVK 488
BLAST of Lag0011805 vs. NCBI nr
Match:
TXG69253.1 (hypothetical protein EZV62_004188 [Acer yangbiense])
HSP 1 Score: 290.8 bits (743), Expect = 2.5e-74
Identity = 209/586 (35.67%), Postives = 294/586 (50.17%), Query Frame = 0
Query: 1 MANASLTNATSSVVTGAGNFS--SPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKL 60
+A +S + AT +V+ N S S P LNQ +IKLDR + +LWK + +I++G++L
Sbjct: 11 LAPSSSSTATPTVLQEGSNSSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRL 70
Query: 61 EGHLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEA 120
+GHL T+ CP F+ P+ T V ++ + SG+ S NP+YE
Sbjct: 71 DGHLYSTRPCPPEFL---------PSPTTPGVPSPTTPGVSDSGSCS-------NPEYEK 130
Query: 121 WAAVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTR 180
W DQLL+GWLY+SMT VA VMG A LW ++ LFG S+++ + +R + Q TR
Sbjct: 131 WLVNDQLLMGWLYSSMTENVALSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTR 190
Query: 181 NGKMKMAEYLRIMKNHPDNLGLA------------------------------------- 240
G M EYL MK D+L +A
Sbjct: 191 KGSSTMEEYLTQMKTWADSLAIAGDPYPENLLFANSLAGLDSEYMPIVVLIEAREHFTWQ 250
Query: 241 ----ELLVFEKRLELQNSHKSSVTFNHNATTNMTTSKTTSSPKQTNLSN----------T 300
LL ++ +LE N+ + + + ++ T+K ++P SN
Sbjct: 251 EIYDTLLSYDSKLEHINNVSAKGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRA 310
Query: 301 PRQGFYNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRFDKEFSPIQNMS 360
P +G G G G R RGRG N N+RPTCQVCGK GHS VCY R+D + +
Sbjct: 311 PNRG---GFRGGGGRFRGRGG--RNNNSRPTCQVCGKFGHSASVCYFRYDDNYMGSVPTA 370
Query: 361 NGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWYADSSASNHFTRSYENFNNPT 420
N N N P +VF+ T PET+ D WYADS A+NH T N + +
Sbjct: 371 NSNANSP------------SVFVAT-----PETVDDTTWYADSGATNHVTNDAGNLDLKS 430
Query: 421 EYGGNDYVTIGNGDKLPITCVGSTSL-SDGHHVLQLENVLCVPEIAKNLVSLSRLAQDNN 480
+Y G++ + +GNG +L I+ VG SL S H + L+ VL VPEI KNL+S+SRL DN+
Sbjct: 431 DYRGDESLMVGNGKQLDISHVGLKSLPSLTKHSIILKQVLHVPEIRKNLLSVSRLVNDND 490
Query: 481 VYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQLH--------DAQPRISKVSRCS----- 513
V+IEFH C VKDK TG VL+G LK+GLYQL + QP +K SR S
Sbjct: 491 VFIEFHANCCFVKDKLTGMEVLRGRLKNGLYQLEIPTTKSAFNIQPGPTK-SRSSTAHFF 550
BLAST of Lag0011805 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 6.1e-31
Identity = 140/566 (24.73%), Postives = 227/566 (40.11%), Query Frame = 0
Query: 25 LNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLGTKECPHMFVQQVDESANPPT 84
LN ++ +T KL + L+W ++ GY+L G L G+ + PP
Sbjct: 16 LNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGS-------------TTMPPA 75
Query: 85 TTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQLLLGWLYNSMTPEVATQVMG 144
T + A NP Y W D+L+ + +++ V V
Sbjct: 76 TIGTDAAPR------------------VNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSR 135
Query: 145 VENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNGKMKMAEYLRIMKNHPDNLG-LAEL 204
A +W +++++ S LR +Q G + +Y++ + D L L +
Sbjct: 136 ATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKP 195
Query: 205 LVFEKRLE--LQN-----------------------------SHKSSVTFNHNATTNMTT 264
+ ++++E L+N +H+S + +AT T
Sbjct: 196 MDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPIT 255
Query: 265 SKTTSSPKQT---NLSNTPRQGFYNGQHGNGN----RSRGRGRDYNNYNNRP---TCQVC 324
+ S T N +N R Y+ ++ N N + NN ++P CQ+C
Sbjct: 256 ANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQIC 315
Query: 325 GKVGHSTLVCYHRFDKEFSPIQN-MSNGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETL 384
G GHS C S +Q+ +S+ N PP+ + A+
Sbjct: 316 GVQGHSAKRC--------SQLQHFLSSVNSQQPPS--------PFTPWQPRANLALGSPY 375
Query: 385 VDPNWYADSSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQ 444
NW DS A++H T + N + Y G D V + +G +PI+ GSTSLS L
Sbjct: 376 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLN 435
Query: 445 LENVLCVPEIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQ--L 504
L N+L VP I KNL+S+ RL N V +EF VKD +TG +L+G KD LY+ +
Sbjct: 436 LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPI 495
Query: 505 HDAQPRISKVSRCSQLIDSSVLVVSSVFPTVNVDVSRHIWHRRLGHPTTKVLDFIVQSCS 545
+QP S+F + + + WH RLGHP +L+ ++ + S
Sbjct: 496 ASSQP-------------------VSLFASPSSKATHSSWHARLGHPAPSILNSVISNYS 513
BLAST of Lag0011805 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.3e-28
Identity = 140/549 (25.50%), Postives = 213/549 (38.80%), Query Frame = 0
Query: 25 LNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLGTKECPHMFVQQVDESANPPT 84
LN ++ +T KL + L+W ++ GY+L G L G+ P P T
Sbjct: 16 LNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMP------------PAT 75
Query: 85 TTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQLLLGWLYNSMTPEVATQVMG 144
V R NP Y W D+L+ + +++ V V
Sbjct: 76 IGTDAVPR-------------------VNPDYTRWRRQDKLIYSAILGAISMSVQPAVSR 135
Query: 145 VENANDLWIEIQELFGVQSR---AEEDFLRQTFQQTRNGK-MKMAEYL-RIMKNHPDNLG 204
A +W +++++ S + F+ + Q GK M E + R+++N PD+
Sbjct: 136 ATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYK 195
Query: 205 --LAELLVFEKRLELQNSHKSSVTFNHN-----------ATTNMTTSKTTSSPKQTNLSN 264
+ ++ + L H+ + T N+ T + T++ + N
Sbjct: 196 PVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRG 255
Query: 265 TPRQGFYNGQHGNGNRSRGRGRDYNNYNNRP---TCQVCGKVGHSTLVC--YHRFDKEFS 324
R N N + G +N +P CQ+C GHS C H+F
Sbjct: 256 DNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQF----- 315
Query: 325 PIQNMSNGNGNYPPNRGNGNGQQHTNVFMTTQ---KTAIPETLVDPNWYADSSASNHFTR 384
+ N QQ T+ F Q A+ NW DS A++H T
Sbjct: 316 ---------------QSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITS 375
Query: 385 SYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLCVPEIAKNLVSL 444
+ N + Y G D V I +G +PIT GS SL L L VL VP I KNL+S+
Sbjct: 376 DFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISV 435
Query: 445 SRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQ--LHDAQPRISKVSRCSQLI 504
RL N V +EF VKD +TG +L+G KD LY+ + +Q S CS+
Sbjct: 436 YRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKAT 492
Query: 505 DSSVLVVSSVFPTVNVDVSRHIWHRRLGHPTTKVLDFIVQSCSFSI-KGNEKNLFCESCQ 545
SS WH RLGHP+ +L+ ++ + S + + K L C C
Sbjct: 496 HSS-------------------WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCF 492
BLAST of Lag0011805 vs. ExPASy TrEMBL
Match:
A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 7.8e-98
Identity = 222/456 (48.68%), Postives = 288/456 (63.16%), Query Frame = 0
Query: 1 MANASLTNATSSVVTGAGNFSSPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEG 60
MANA T A S+ + FS+PPLNQ+LNQ+T++KLDR + LLWK +A+ IL+ YKLEG
Sbjct: 1 MANAQPTAAPPSL--SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEG 60
Query: 61 HLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWA 120
HL CP FV SA+ TTV E A GA+SS + + NP +E W
Sbjct: 61 HLTAETPCPSHFVL----SASSSNTTVTE-----EGADATIGASSSITPRIVNPLFEQWV 120
Query: 121 AVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNG 180
D LLLGWLYNSMTP+VA Q+MG N DLW Q+ FGVQSRAEEDFLRQ Q TR G
Sbjct: 121 TTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG 180
Query: 181 KMKMAE-YLRIMKNHPDNLGL---AELLVFEKRLELQNSHKSSVTFNHNATTNMTTSKTT 240
++ + +++ PD L ++LL+FEKRL+ QN+ K + T N + + ++
Sbjct: 181 LDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKN-TGNITQSPALNMAQRF 240
Query: 241 SSPKQTNLSNTPRQGFYNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRF 300
+ Q N SN G YN QH +G R N NN PTCQ+CGK GHS LVCY+RF
Sbjct: 241 ALNGQRNQSNKKFYG-YNRQHFSGQR--------GNLNNGPTCQLCGKYGHSALVCYNRF 300
Query: 301 DKEF-SPI---QNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKT---AIPETLVDPNWYAD 360
+KEF SP+ +N + NG+ PN VF++TQ A P+T+VDPNWY D
Sbjct: 301 NKEFSSPLVQNRNEHSSNGSVSPNPA---------VFVSTQNATPFATPDTVVDPNWYID 360
Query: 361 SSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLCVP 420
S A+NH TR N NPTEY G + VT+GNG++L I+ VG+T L+DG L L+N+LCVP
Sbjct: 361 SGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVP 420
Query: 421 EIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGR 446
+IAKNL+S+S+LAQDN++YIEFH C +KDKSTG+
Sbjct: 421 DIAKNLISVSKLAQDNHIYIEFHGYCCFIKDKSTGK 426
BLAST of Lag0011805 vs. ExPASy TrEMBL
Match:
A0A803PEH4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 306.2 bits (783), Expect = 2.8e-79
Identity = 214/597 (35.85%), Postives = 298/597 (49.92%), Query Frame = 0
Query: 1 MANASLTNATSSVVTGAGNFSSPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEG 60
+A AS +N T+ F+ P LNQ S+KLDR + LWK + +I+RG++L G
Sbjct: 21 VAGASSSNNTNQASQLPNAFAPPTLNQPF----SLKLDRNNYTLWKTMVSTIVRGHRLHG 80
Query: 61 HLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWA 120
+L GT CP FV D VTNP+YE W
Sbjct: 81 YLSGTLMCPPEFVMVGDTQ-------------------------------VTNPEYENWI 140
Query: 121 AVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNG 180
DQLL+GWLY+SMT +AT+VMG +A +L ++ L+G S+++ D R Q TR G
Sbjct: 141 ITDQLLMGWLYSSMTEGIATEVMGSHSAANLQRNLESLYGAYSKSKMDDTRTLIQTTRKG 200
Query: 181 KMKMAEYLRIMKNHPDNLGL-------------------AELLVFEKRLELQN------- 240
M+EYLR KN + L L AE L ++E ++
Sbjct: 201 STLMSEYLRQKKNWSNMLALAGDPYPEAHLVANVLFGLDAEYLSIVVQIEARSNTTWQEL 260
Query: 241 -----SHKSSVTFNHNATTNMTTSKTTSSPKQTNL-----------------SNTPRQGF 300
S S + N T N ++K TSS Q N+ ++T G
Sbjct: 261 QDLLLSFDSKIERLQNLTLN--SNKATSSSPQANMAAKTNNNGRGRGFQSQNASTNSGGL 320
Query: 301 YNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRFDKEFSPIQNMSNGNGN 360
++ G NR RGRGR + +RPTCQV GK GH+ VCY+RFD+ + G+
Sbjct: 321 FSNSRGTSNRFRGRGRGPGS-GSRPTCQVYGKYGHTAAVCYNRFDESYM-------GSDP 380
Query: 361 YPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWYADSSASNHFTRSYENFNNPTEYGGN 420
P+ N GQ + N + A PE L W+ADS ASNH T N +Y G
Sbjct: 381 NNPHNQNKAGQTNNN---HSAFVATPEVLEFDAWFADSGASNHITSDPANLTQKQDYNGK 440
Query: 421 DYVTIGNGDKLPITCVGSTSLS-DGHHVLQLENVLCVPEIAKNLVSLSRLAQDNNVYIEF 480
+ V +GNG KL IT +G+ L+ + + L L+++L VP+IAKNLVS+S+LA DNNV IEF
Sbjct: 441 ESVVVGNGSKLRITHIGNGKLNIESGNYLLLKDMLLVPKIAKNLVSVSKLATDNNVLIEF 500
Query: 481 HEKFCLVKDKSTGRVVLKGTLKDGLYQLHDAQPRISKVSRCSQLIDSSVLVVSSVFPTVN 540
+ FCLVKDK T +V+L G LKD LYQL + S + S + + + V S
Sbjct: 501 YSNFCLVKDKVTKKVLLHGVLKDELYQLDSPFTKSSHPYQQSNFLSAFTISVDSNVNQSQ 560
Query: 541 VD----VSRHIWHRRLGHPTTKVLDFIVQSCSFSIKGNEKNLFCESCQFGKSHALAF 545
D + HRRLGHP+ KVL+ +++S + S+ N C++CQ+GK+HAL F
Sbjct: 561 TDSLLISQMDVGHRRLGHPSIKVLNHVLESVNVSVSKNAMKTVCDACQYGKAHALPF 569
BLAST of Lag0011805 vs. ExPASy TrEMBL
Match:
A0A803P4G6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 1.5e-77
Identity = 219/576 (38.02%), Postives = 299/576 (51.91%), Query Frame = 0
Query: 15 TGAGNFSSPPLNQL----------LNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLG 74
T GN S+ L+QL LNQ S+KLDR + LWK + +I+RGY+++G L G
Sbjct: 9 TATGN-STASLSQLPNTYPQHFSTLNQAFSLKLDRNNFTLWKTMVSTIVRGYRIDGFLSG 68
Query: 75 TKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQ 134
TK CP F+ P T E S NP++E W DQ
Sbjct: 69 TKPCPLEFL---------PAGTNAEGVEIIS----------------VNPEFEHWIINDQ 128
Query: 135 LLLGWLYNSMTPEVATQVMGVENANDLW----IEIQELFGVQSRAEEDFLRQTFQQTRNG 194
LL+GWLY+SMT +AT+VMG A +LW E + V S ++L Q
Sbjct: 129 LLMGWLYSSMTETIATEVMGTSTAAELWHDPYPESHLISNVLSGLGAEYLTIIVQIEARS 188
Query: 195 KMKMAEYLRIMKNHPDNLGLAELLVFEKRLELQNSHKSSVTFNHNATTNMTTSKTTSSP- 254
K + LL F+ ++E S + KTT P
Sbjct: 189 KTTWQALQDL------------LLSFDSKVERMQS--------------LEGPKTTPPPV 248
Query: 255 -KQTNL-SNTPRQ----GFY-------NGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVG 314
Q N+ + TP Q GFY NG G+ RSRGRGR YNN N+RPTCQVCGK G
Sbjct: 249 ASQANMVAKTPPQGRGRGFYSQNQTNNNGGRGSRGRSRGRGR-YNN-NSRPTCQVCGKFG 308
Query: 315 HSTLVCYHRFDKEFSPIQNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNW 374
HS VCY+R+D+ F + PN N Q H N F+ T P+ L W
Sbjct: 309 HSAAVCYNRYDENFM----------GHDPNAQNQQKQGH-NAFIAT-----PKMLDSDAW 368
Query: 375 YADSSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSL-SDGHHVLQLENV 434
+ DS ASNH T + + + +EYGG + +T+G+G KL I+ +G+ L ++ +L L+ +
Sbjct: 369 FVDSGASNHITSATNSMSQKSEYGGKETLTVGDGSKLAISHIGTGFLKTNSGQLLMLKQM 428
Query: 435 LCVPEIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQLHDAQPR 494
L VP+IAKNL+S+ +L DNNV IEF+ CLVKDK+T +V+L+G LKDGLYQ+ P+
Sbjct: 429 LHVPKIAKNLISVLKLTTDNNVLIEFYSDVCLVKDKTTKKVLLQGVLKDGLYQIQHPHPQ 488
Query: 495 -----ISKVSRCSQLIDSSVLVVSSVFPTV-NVDVSR-----------HIWHRRLGHPTT 545
IS SR ++ + SS + SV PTV NV V+R +WHRRLGHP+T
Sbjct: 489 PRSALISFPSRSTKTMKSSSV---SVSPTVFNVHVNRPVVSESLHSKIDVWHRRLGHPST 511
BLAST of Lag0011805 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 295.4 bits (755), Expect = 4.9e-76
Identity = 214/575 (37.22%), Postives = 288/575 (50.09%), Query Frame = 0
Query: 1 MANASLTNATSSVVTGAGNFSSPPLNQLLNQITSIKLDRGDDLLWKNIAMSILRGYKLEG 60
++N T V F+SPPLNQLLNQITSIK+DRG+ LLW+N+A+ ILR YKL
Sbjct: 3 ISNLPTPIVTPPAVVSGAVFTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFD 62
Query: 61 HLLGTKECPHMFVQQVDESANPPTTTVVEVARASSSRTAVSGAASSESRVVTNPQYEAWA 120
+L G K C PPT V + + T + G+ SS+S NP YEAW
Sbjct: 63 YLTGDKPC-------------PPTHLV-----PTDTPTNIEGSTSSQSSPTLNPTYEAWI 122
Query: 121 AVDQLLLGWLYNSMTPEVATQVMGVENANDLWIEIQELFGVQSRAEEDFLRQTFQQTRNG 180
VD+LLLGWLYNSM +VA QVMG + +LW +QELFGVQSRAE D+L+Q FQQT G
Sbjct: 123 VVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKG 182
Query: 181 KMKMAEYLRIMKNHPDNLGL---------------------------------------- 240
++M EYL++MK+H DNL L
Sbjct: 183 SLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEM 242
Query: 241 -AELLVFEKRLELQNSHKSSVTFNHNATTNMT--------TSKTTSSPKQTNLSNTPRQG 300
AELL +EKRLE QNS KS + N T ++ T++ T++ ++ SNT R G
Sbjct: 243 HAELLTYEKRLEYQNSLKSGIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHGSNTHRGG 302
Query: 301 FYNGQHGN-GNRSRGRGRDYNNYNNRPTCQVCGKVGHSTLVCYHRFDKEFSPIQNMSNGN 360
Y Q G+ G R+RGRG + N F+P SN
Sbjct: 303 GY--QRGSFGQRNRGRGPQPTQHKN------------------------FTP----SNSG 362
Query: 361 GNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWYADSSASNHFTRSYENFNNPTEYG 420
N HT+ +TT PET++DP+WYADS A++H T + N +Y
Sbjct: 363 PNV-------FAAHHTSTTVTT-----PETVIDPSWYADSGATSHVTANPNNVEQKVDYS 422
Query: 421 GNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLCVPEIAKNLVSLSRLAQDNNVYIE 480
G + V + NG+KL I+ +GST++ L+L++VL VP+IAKNL
Sbjct: 423 GTENVIVANGNKLSISHIGSTNIHASGGSLKLKDVLRVPDIAKNL--------------- 482
Query: 481 FHEKFCLVKDKSTGRVVLKGTLKDGLYQLH------DAQPRISKVSRCSQLIDSSVLVVS 512
DK++GR +LKGTLKD LY+L A P ++ ++ S +S
Sbjct: 483 ---------DKASGRTLLKGTLKDNLYRLDRSHRSPPATPTLTAPLFAHTVVSLSNNTLS 493
BLAST of Lag0011805 vs. ExPASy TrEMBL
Match:
A0A2K3MUJ9 (Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g017679 PE=4 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 6.4e-76
Identity = 190/557 (34.11%), Postives = 265/557 (47.58%), Query Frame = 0
Query: 29 LNQITSIKLDRGDDLLWKNIAMSILRGYKLEGHLLGTKECPHMFVQQVDESANPPTTTVV 88
L S+KLDR + LWK++ + ++RG K +G++LGTK+CP FV +D +
Sbjct: 12 LPSTVSVKLDRDNFPLWKSLVLPLIRGCKYDGYMLGTKKCPDQFVTSIDNTEK------- 71
Query: 89 EVARASSSRTAVSGAASSESRVVTNPQYEAWAAVDQLLLGWLYNSMTPEVATQVMGVENA 148
NP Y+ W A DQ LLGWL NSMT ++ATQV+ E +
Sbjct: 72 -----------------------INPDYQDWQADDQALLGWLMNSMTVDIATQVLHCETS 131
Query: 149 NDLWIEIQELFGVQSRAEEDFLRQTFQQTRNGKMKMAEYLRIMKNHPDNLGL-------- 208
LW E Q L G +R+ +L+ F T +MKM +YL MKN D L L
Sbjct: 132 KQLWDEAQSLAGAHTRSRIIYLKSEFHNTHKREMKMEQYLAKMKNLADKLKLAGSPISSS 191
Query: 209 ---------------------------------AELLVFEKRLELQNSHKSSVTFNHNAT 268
A+LL FE RL+ N+ FN+
Sbjct: 192 DLMIQTLNGLDSEYNPVVVKLSDQTNISWVDFQAQLLAFESRLDQLNN------FNN--- 251
Query: 269 TNMTTSKTTSSPKQTNLSNTPRQGFYNGQHGNGNRSRGRGRDYNNYNNRPTCQVCGKVGH 328
N+ S +S ++ + +G + G + G R GRGR + RP CQ+CGK GH
Sbjct: 252 INLNASANFASKNESGGNKFGSRGGWRGSNSRGMRG-GRGRARMSKPPRPICQICGKFGH 311
Query: 329 STLVCYHRFDKEFSPIQNMSNGNGNYPPNRGNGNGQQHTNVFMTTQKTAIPETLVDPNWY 388
+ CY+RFDK ++ + + G G++ + A P D WY
Sbjct: 312 TAAQCYYRFDKSYTEKNHYAEGEGSH------------------SAFVASPYHGQDYEWY 371
Query: 389 ADSSASNHFTRSYENFNNPTEYGGNDYVTIGNGDKLPITCVGSTSLSDGHHVLQLENVLC 448
DS ASNH T + E G + + +GNG+KL I GST L+D + L NVL
Sbjct: 372 FDSGASNHVTHQSGQLQDLNENNGKNSLLVGNGEKLKILASGSTKLND----VNLRNVLY 431
Query: 449 VPEIAKNLVSLSRLAQDNNVYIEFHEKFCLVKDKSTGRVVLKGTLKDGLYQLHDAQPRIS 508
VPEI KNL+S+S+L DNN +EF E +C VKDK TG+ +LKG LKDGLYQL + +
Sbjct: 432 VPEITKNLLSVSKLTIDNNALVEFDENYCYVKDKLTGKALLKGRLKDGLYQLSANKEPPT 488
Query: 509 KVSRCSQLIDSSVLVVSSVFPTVNVDVSRHIWHRRLGHPTTKVLDFIVQSCSFSIKGNEK 545
C+ + + IWHR+LGHP KVL+ +++ + I ++K
Sbjct: 492 NKDPCAYI------------------SLKEIWHRKLGHPNNKVLEKVLKDNNVKISPSDK 488
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016902197.1 | 1.6e-97 | 48.68 | PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo] | [more] |
XP_022151683.1 | 1.0e-75 | 37.22 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
PNX94503.1 | 1.3e-75 | 34.11 | putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense... | [more] |
PNX76291.1 | 3.9e-75 | 34.81 | gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium praten... | [more] |
TXG69253.1 | 2.5e-74 | 35.67 | hypothetical protein EZV62_004188 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 6.1e-31 | 24.73 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.3e-28 | 25.50 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E1U6 | 7.8e-98 | 48.68 | uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A803PEH4 | 2.8e-79 | 35.85 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803P4G6 | 1.5e-77 | 38.02 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DCW4 | 4.9e-76 | 37.22 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A2K3MUJ9 | 6.4e-76 | 34.11 | Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium prat... | [more] |
Match Name | E-value | Identity | Description | |