Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCCGACGAACTGGATCAATACGACACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCACCGTGATCCTGTCCTTAGAATGTAGGGCCAAACACATGTGTCATTGGACACTTCACCATCTCCTCCCGTCAAAATCATTTTCCACATCCGGATGGCAAAGACTATCACTTGAACGGATAAGGATCTACCGAAGGCAGGAATGAACCATAACAAAGCCTTACACATTAAAGTGATCACTACAGGGAAAAGGGTGCCAATGGTTCTGGTTGACAATGGATCGGCCCTGAACGTGTGCCCATTCAGAACTGCTACTTGCTTAAGATATCAGCAAAAAGATTTCGCAGTCTTAGCGCAGGCCATTAGAGCATATGACAACACAGGGGGGTAATGGGCATCCTGGCCTTAGAATGAACTACAAGGCCGGTCCTGTTTAAGGAAAAACTCCAGGTACTAGACATCCCGACTTCCTTCAACCTGCTACTTGGAAGGTCGTGGATTCATGCCATAGAAGCGGTCCCCTCTACTTTGCATCATCAAGTCGACGTTCATACAAGGGAATCATTCAATTTCGATCTTTGGAGATCCAGAAGAGTCGGTGCTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAGTTCAAGCAAGTGCAGGTCATTGAGTTGGCAGAACCAGTCAAGGAATATTTAGCCTTGCCCGATTTTAGTGATAATGTCTTTGTCAGGGAAATATTCCGATCAATGTGCCACCTCCCCGGATCAGGACTCGGCCGGTGTCACCAAGGAATCGTGGAGCCAATTCATGTCCAGGCAATTGAGCCACCTTTTGGGTTGGGGTATATACCTACGAAAGAAGATCTCCAAAAATTGGAAGACAAGAAGAAGAAAAAGAAGAATAAGAGTCTCGTAAGAAAGCTTTTAAATATCTTCAGACTCTAAATGGGCGATTAGTCAAAGAAAGATATAACTTTCCCTTTTTCGGTTTTCTGGAGCCATGGATCGATGCTAGCGGGAACCACGTGCCGGGTTTCTAAATAAATATTCTTTACAGATAAAGTAACCTGGAAGCTTGATGAGGGGAAAGAAAAAATGATCGACCAGTGGGAAGAACCAAGGATCTTGACCTGGTATCCAGAGAAGAAAGGAGAAAAGGAAGGCTGTTGAATCAGAGATTGAGGAAGAATACCAGCTTCAACTTATGTTTACTCAGGACGGTGCAGCAGGGGAACAAGGGATGGTGTCCATGAAAATTGCGAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGATGGAGCACCACCCAATTGGTCTTCTCTTCCTCAGCTTCAGTCTTTTAGTGTCCGAGATGAACCAGTCTTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACATCTTTGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTTGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTATGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGATGATGAGAAAGAAAAAGGAATATCGAAAAAAAGGAAGAAAACAAATAGCAGACCTTAGCTCCCCTTCCAATGATCACTGCCTCATGCAGGCAGATGAGGAAGAAACCTATGTTTAAACTCCTCCTTCACTCTTAGAAATGGTGGAGAGATCAGAGGAAATGAAGGTTCAACCCTCATGGAAGAAACCCAACCCATTCATTTAGGGACTACAGACGAACCCCAAGAGGTTAGGATAGGAACCACTTTGACTCTCGAAGAATGGCTTGACCTTTTGAAAGAATACAAGGATGCCTTTGCATGGTTCTACGATGATATGCCTGGACTCAGCACAGAAAGAATTTCGAAAACATCCCTTTGTATCCTTGATGCCAAGCTAGTCAAGCAGAAACTTTGGAGAATGAGGCTCGAATAG
mRNA sequence
ATGGACTCCGACGAACTGGATCAATACGACACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCACCGTGATCCTGTCCTTAGAATGCCATTAGAGCATATGACAACACAGGGGGGTAATGGGCATCCTGGCCTTAGAATGAACTACAAGGCCGGTCCTAAGCGGTCCCCTCTACTTTGCATCATCAAGTCGACGTTCATACAAGGGAATCATTCAATTTCGATCTTTGGAGATCCAGAAGAGTCGGTGCTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAGTTCAAGCAAGTGCAGGTCATTGAGTTGGCAGAACCAGTCAAGGAATATTTAGCCTTGCCCGATTTTAGTGATAATGTCTTTGTCAGGGAAATATTCCGATCAATGTGCCACCTCCCCGGATCAGGACTCGGCCGGTGTCACCAAGGAATCGTGGAGCCAATTCATGTCCAGGCAATTGAGCCACCTTTTGGGTTGGGGTATATACCTACGAAAGAAGATCTCCAAAAATTGGAAGACAAGAAGAAGAAAAAGAAGAATAAGAGTCTCAGAAGAAAGGAGAAAAGGAAGGCTGTTGAATCAGAGATTGAGGAAGAATACCAGCTTCAACTTATGTTTACTCAGGACGGTGCAGCAGGGGAACAAGGGATGGTGTCCATGAAAATTGCGAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGATGGAGCACCACCCAATTGGTCTTCTCTTCCTCAGCTTCAGTCTTTTAGTGTCCGAGATGAACCAGTCTTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACATCTTTGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTTGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTATGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAAAATGGTGGAGAGATCAGAGGAAATGAAGGTTCAACCCTCATGGAAGAAACCCAACCCATTCATTTAGGGACTACAGACGAACCCCAAGAGGTTAGGATAGGAACCACTTTGACTCTCGAAGAATGGCTTGACCTTTTGAAAGAATACAAGGATGCCTTTGCATGGTTCTACGATGATATGCCTGGACTCAGCACAGAAAGAATTTCGAAAACATCCCTTTGTATCCTTGATGCCAAGCTAGTCAAGCAGAAACTTTGGAGAATGAGGCTCGAATAG
Coding sequence (CDS)
ATGGACTCCGACGAACTGGATCAATACGACACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCACCGTGATCCTGTCCTTAGAATGCCATTAGAGCATATGACAACACAGGGGGGTAATGGGCATCCTGGCCTTAGAATGAACTACAAGGCCGGTCCTAAGCGGTCCCCTCTACTTTGCATCATCAAGTCGACGTTCATACAAGGGAATCATTCAATTTCGATCTTTGGAGATCCAGAAGAGTCGGTGCTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAGTTCAAGCAAGTGCAGGTCATTGAGTTGGCAGAACCAGTCAAGGAATATTTAGCCTTGCCCGATTTTAGTGATAATGTCTTTGTCAGGGAAATATTCCGATCAATGTGCCACCTCCCCGGATCAGGACTCGGCCGGTGTCACCAAGGAATCGTGGAGCCAATTCATGTCCAGGCAATTGAGCCACCTTTTGGGTTGGGGTATATACCTACGAAAGAAGATCTCCAAAAATTGGAAGACAAGAAGAAGAAAAAGAAGAATAAGAGTCTCAGAAGAAAGGAGAAAAGGAAGGCTGTTGAATCAGAGATTGAGGAAGAATACCAGCTTCAACTTATGTTTACTCAGGACGGTGCAGCAGGGGAACAAGGGATGGTGTCCATGAAAATTGCGAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGATGGAGCACCACCCAATTGGTCTTCTCTTCCTCAGCTTCAGTCTTTTAGTGTCCGAGATGAACCAGTCTTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACATCTTTGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTTGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTATGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAAAATGGTGGAGAGATCAGAGGAAATGAAGGTTCAACCCTCATGGAAGAAACCCAACCCATTCATTTAGGGACTACAGACGAACCCCAAGAGGTTAGGATAGGAACCACTTTGACTCTCGAAGAATGGCTTGACCTTTTGAAAGAATACAAGGATGCCTTTGCATGGTTCTACGATGATATGCCTGGACTCAGCACAGAAAGAATTTCGAAAACATCCCTTTGTATCCTTGATGCCAAGCTAGTCAAGCAGAAACTTTGGAGAATGAGGCTCGAATAG
Protein sequence
MDSDELDQYDTNDDMDFVNNEEAQHMASKSHRDPVLRMPLEHMTTQGGNGHPGLRMNYKAGPKRSPLLCIIKSTFIQGNHSISIFGDPEESVLDPIPVREIQHDENLELAGFQFKQVQVIELAEPVKEYLALPDFSDNVFVREIFRSMCHLPGSGLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSLRRKEKRKAVESEIEEEYQLQLMFTQDGAAGEQGMVSMKIANPVAKDPSTLIIPTDGAPPNWSSLPQLQSFSVRDEPVLVKSVESLFNVTSLEDGLQSVPSVSVIISEVELALEARESVIKELMVCNEMKSRVAYVSENGGEIRGNEGSTLMEETQPIHLGTTDEPQEVRIGTTLTLEEWLDLLKEYKDAFAWFYDDMPGLSTERISKTSLCILDAKLVKQKLWRMRLE
Homology
BLAST of Lag0011633 vs. NCBI nr
Match:
EEF27092.1 (conserved hypothetical protein [Ricinus communis])
HSP 1 Score: 201.1 bits (510), Expect = 2.0e-47
Identity = 125/188 (66.49%), Postives = 136/188 (72.34%), Query Frame = 0
Query: 144 IFRSMCHLPGSGLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSLR 203
+FRSM +LPGSGLGR HQGIVEPIHVQAIEPPFGLG + D KK
Sbjct: 1 MFRSMRYLPGSGLGRHHQGIVEPIHVQAIEPPFGLGLC--------MGDFSKKDITFPFS 60
Query: 204 RKEKRKAVESEIEEEYQLQLMFTQDGAAGEQGMVSMKIANPVAKDPSTLIIPTDGAPPNW 263
++ L QDGAAGEQGMVSM IA+PVAKDPSTLIIP DGAP NW
Sbjct: 61 VFRSHGSM---------LAGTACQDGAAGEQGMVSMIIADPVAKDPSTLIIPADGAPRNW 120
Query: 264 SSLPQLQSFSVRDEPVLVKSVESLFNVTSLEDGLQSVPSVSVIISEVE-LALEARESVIK 323
+SLPQL+S SV EPVLVKSVESLFNVTS EDGL+SVPSVSVIISEVE AL ARESVIK
Sbjct: 121 ASLPQLKSVSVLSEPVLVKSVESLFNVTSSEDGLKSVPSVSVIISEVERSALGARESVIK 171
Query: 324 ELMVCNEM 331
EL+VCNE+
Sbjct: 181 ELVVCNEI 171
BLAST of Lag0011633 vs. NCBI nr
Match:
EEF25156.1 (conserved hypothetical protein, partial [Ricinus communis])
HSP 1 Score: 154.8 bits (390), Expect = 1.6e-33
Identity = 80/108 (74.07%), Postives = 83/108 (76.85%), Query Frame = 0
Query: 72 KSTFIQGNHSISIFGDPEESVLDPIPVREIQHDENLELAGFQFKQVQVIELAEPVKEYLA 131
K FIQGN ISIFGDPEE VLDPI V EIQHDENL ELAE VKEYL
Sbjct: 30 KVKFIQGNRVISIFGDPEEPVLDPIQVLEIQHDENL-------------ELAETVKEYLP 89
Query: 132 LPDFSDNVFVREIFRSMCHLPGSGLGRCHQGIVEPIHVQAIEPPFGLG 180
LP+FSDNVFV E+FRSM +LPGSGLGR HQGIVEPIHVQAIEPPFGLG
Sbjct: 90 LPNFSDNVFVGEMFRSMRYLPGSGLGRHHQGIVEPIHVQAIEPPFGLG 124
BLAST of Lag0011633 vs. NCBI nr
Match:
RVW53436.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Vitis vinifera])
HSP 1 Score: 105.1 bits (261), Expect = 1.5e-18
Identity = 114/406 (28.08%), Postives = 181/406 (44.58%), Query Frame = 0
Query: 97 PVREIQH-DENLELAGFQFKQVQVIELAEPVKEYLALP-DFSDNVFVREIFRSMCHLPGS 156
PV EI H D++L L GF F +VQ +E+ + ++++AL D ++ V +I RSM +LPG
Sbjct: 957 PVLEISHADDDLFLTGFTFDEVQTLEMEDFCRDFVALSFDQHNSTVVLDIMRSMAYLPGM 1016
Query: 157 GLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSL------------ 216
GLGR G E + + PFGLG+IPT+ D + + ++++ L
Sbjct: 1017 GLGRRQHGPREFVTFPDRDVPFGLGFIPTEADYRYMARLRRERVRARLTHTPFYYPVRPY 1076
Query: 217 ---------RRKEKRKAVESEI-----EEEYQLQLMFTQ----DGAAGEQGMVSMKIANP 276
R E + I +E +LQ + Q DGA G V + +P
Sbjct: 1077 TMSLADYFVRASEPHAPSDGIIGGLSTTQEAELQRLVQQLQLSDGAPGPSASVLIAPPSP 1136
Query: 277 VAKDPSTLIIP---------------TDGAPPNWSSLPQLQSFSVRD----EPVLVKSVE 336
TL P DGA P + ++ + S+ P + S
Sbjct: 1137 DRTSLMTLCFPDEIDDHGTFAEIGDVEDGAVPRDEYIDEMLAMSLSQTEEIAPPELASPF 1196
Query: 337 SLFNVTSLE--DGLQSVPSVSVIISEVELALEARESVI------KELM-------VCNEM 396
LF V+ E +Q P++ V + +V +A++ + + +L+ V +
Sbjct: 1197 DLFGVSVFEIAGEIQVAPTLEV-VEDVVVAVDLFDGPVGLVEGASDLVDPPLPFDVLSGF 1256
Query: 397 KSRVAYVSENGG------EIRGNEGSTLMEETQPIHLGTTDEPQEVRIGTTLTLEE---W 428
SR YVS+ E S + +T+ + GT D+P+E+RIG+ L+ +E
Sbjct: 1257 VSRHDYVSDFSSMDLSTFEPVDQRVSPAVGDTEIVDFGTADQPRELRIGSDLSTDERDSL 1316
BLAST of Lag0011633 vs. NCBI nr
Match:
XP_019078464.1 (PREDICTED: uncharacterized protein LOC109123373 [Vitis vinifera])
HSP 1 Score: 102.8 bits (255), Expect = 7.4e-18
Identity = 102/387 (26.36%), Postives = 174/387 (44.96%), Query Frame = 0
Query: 97 PVREIQH-DENLELAGFQFKQVQVIELAEPVKEYLALP-DFSDNVFVREIFRSMCHLPGS 156
PV EI H D++L L GF F +VQ +E+ + ++++AL D + V +I RSM +LPG
Sbjct: 350 PVLEISHADDDLFLTGFTFDEVQTLEMEDLCRDFVALSFDQHSSTVVLDIMRSMSYLPGM 409
Query: 157 GLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSL------------ 216
GLGR G E + + PFGLG+ PT+ D + + ++++ L
Sbjct: 410 GLGRRQHGPSEFMTFPDRDVPFGLGFSPTEADYRHMARLRRERVRARLTHTPFYYPVRPY 469
Query: 217 ---------RRKEKRKAVESEI-----EEEYQLQLMFTQ----DGAAGEQGMVSMKIANP 276
R E + I +E +LQ + Q DGA G V + +P
Sbjct: 470 TMSLADYFVRASEPHAPSDGIIGGLSTTQEAELQRLVQQLQLSDGAPGPSASVLIAPPSP 529
Query: 277 VAKDPSTLIIP---------------TDGAPPNWSSLPQLQSFSV-RDEPVLVKSVESLF 336
TL P DGA P+ + ++ + S+ + E + + S F
Sbjct: 530 DRTSLMTLCFPDEIDDHGTFAEIGDVVDGAVPHDEYVDEMLAMSLGQTEEIAPPELASPF 589
Query: 337 NVTSLEDGLQSVPSVSVIISEVELALEARESVIKELMVCNEMKSRVAYVSENGGEIRGNE 396
++ VSV+ E+ + V+++++V ++ ++ ++
Sbjct: 590 DLF----------GVSVLEIAEEIQVAPTPEVVEDVIVAVDLFDGPHDSDDDSSPASDSD 649
Query: 397 G-----STLMEETQPIHLGTTDEPQEVRIGTTLTLEE---WLDLLKEYKDAFAWFYDDMP 428
S ++ +T+ + GT D+P+E+RIG+ L+ +E + LL+ Y D FAW Y+DMP
Sbjct: 650 PVDQRVSPIVGDTEIVDFGTADQPRELRIGSDLSTDERDSLIQLLRSYLDVFAWSYEDMP 709
BLAST of Lag0011633 vs. NCBI nr
Match:
RVW73736.1 (Transposon Ty3-G Gag-Pol polyprotein [Vitis vinifera])
HSP 1 Score: 101.7 bits (252), Expect = 1.6e-17
Identity = 94/340 (27.65%), Postives = 162/340 (47.65%), Query Frame = 0
Query: 97 PVREIQH-DENLELAGFQFKQVQVIELAEPVKEYLALP-DFSDNVFVREIFRSMCHLPGS 156
PV EI H D++L L GF F +VQ +E+ + ++++A+ D + V +I RSM +LPG
Sbjct: 19 PVLEISHTDDDLFLTGFTFDEVQTVEIEDFCRDFVAMSFDRHGSTVVLDIMRSMSYLPGM 78
Query: 157 GLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSLRRKEKRKAVESE 216
GLGR G E I + + PFGLG+IPT+ D + +K++ L +
Sbjct: 79 GLGRRQHGPSEFIAIPDHDVPFGLGFIPTEADYLYMARLRKERVRARLTHTPFYYPLRPY 138
Query: 217 IEEEYQLQLMFTQDGAAGEQGMVSMKIANPVAKDPSTLIIPTDGAPPNWSSLPQLQSFSV 276
+ ++ A + G +S P S+ DGA P+ + ++ + S+
Sbjct: 139 TRSLADYFVRASEPDPARDIGGLS-TTRRPSFSALSSSRDVVDGAAPHDEYIDEMLALSL 198
Query: 277 ----RDEPVLVKSVESLFNVTSLEDGLQSVPSVSVIISEVELALEARESVIKELMVCNEM 336
R P L + + D S +S +S ++ + + I + + ++
Sbjct: 199 SRSRRVHPGLTSPFDLFGGASDFVDPPLSFDVLSGFVSRSDIVSDIFD--IDDEIAQHDS 258
Query: 337 KSRVAYVSENGGEIRGNEGSTLMEETQPIHLGTTDEPQEVRIGTTLTLEE---WLDLLKE 396
+ VS++ + S + +T+ + GT D+P+E+RIG+ L+ +E + LL+
Sbjct: 259 DDDSSSVSDS--DPVDQRVSPAVGDTEIVDFGTADQPRELRIGSDLSTDERDSLIQLLRA 318
Query: 397 YKDAFAWFYDDMPGLSTERISKTSLCILDAKLVKQKLWRM 428
Y D FAW Y+DMPGL + + A+ VKQKL R+
Sbjct: 319 YLDVFAWSYEDMPGLDPSIVQHRLPLLPHARPVKQKLRRL 353
BLAST of Lag0011633 vs. ExPASy TrEMBL
Match:
B9TAM0 (G-patch domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_2021640 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 9.7e-48
Identity = 125/188 (66.49%), Postives = 136/188 (72.34%), Query Frame = 0
Query: 144 IFRSMCHLPGSGLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSLR 203
+FRSM +LPGSGLGR HQGIVEPIHVQAIEPPFGLG + D KK
Sbjct: 1 MFRSMRYLPGSGLGRHHQGIVEPIHVQAIEPPFGLGLC--------MGDFSKKDITFPFS 60
Query: 204 RKEKRKAVESEIEEEYQLQLMFTQDGAAGEQGMVSMKIANPVAKDPSTLIIPTDGAPPNW 263
++ L QDGAAGEQGMVSM IA+PVAKDPSTLIIP DGAP NW
Sbjct: 61 VFRSHGSM---------LAGTACQDGAAGEQGMVSMIIADPVAKDPSTLIIPADGAPRNW 120
Query: 264 SSLPQLQSFSVRDEPVLVKSVESLFNVTSLEDGLQSVPSVSVIISEVE-LALEARESVIK 323
+SLPQL+S SV EPVLVKSVESLFNVTS EDGL+SVPSVSVIISEVE AL ARESVIK
Sbjct: 121 ASLPQLKSVSVLSEPVLVKSVESLFNVTSSEDGLKSVPSVSVIISEVERSALGARESVIK 171
Query: 324 ELMVCNEM 331
EL+VCNE+
Sbjct: 181 ELVVCNEI 171
BLAST of Lag0011633 vs. ExPASy TrEMBL
Match:
B9TG58 (G-patch domain-containing protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM_2070490 PE=4 SV=1)
HSP 1 Score: 154.8 bits (390), Expect = 7.9e-34
Identity = 80/108 (74.07%), Postives = 83/108 (76.85%), Query Frame = 0
Query: 72 KSTFIQGNHSISIFGDPEESVLDPIPVREIQHDENLELAGFQFKQVQVIELAEPVKEYLA 131
K FIQGN ISIFGDPEE VLDPI V EIQHDENL ELAE VKEYL
Sbjct: 30 KVKFIQGNRVISIFGDPEEPVLDPIQVLEIQHDENL-------------ELAETVKEYLP 89
Query: 132 LPDFSDNVFVREIFRSMCHLPGSGLGRCHQGIVEPIHVQAIEPPFGLG 180
LP+FSDNVFV E+FRSM +LPGSGLGR HQGIVEPIHVQAIEPPFGLG
Sbjct: 90 LPNFSDNVFVGEMFRSMRYLPGSGLGRHHQGIVEPIHVQAIEPPFGLG 124
BLAST of Lag0011633 vs. ExPASy TrEMBL
Match:
A0A438F0H3 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Vitis vinifera OX=29760 GN=pol_635 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 7.2e-19
Identity = 114/406 (28.08%), Postives = 181/406 (44.58%), Query Frame = 0
Query: 97 PVREIQH-DENLELAGFQFKQVQVIELAEPVKEYLALP-DFSDNVFVREIFRSMCHLPGS 156
PV EI H D++L L GF F +VQ +E+ + ++++AL D ++ V +I RSM +LPG
Sbjct: 957 PVLEISHADDDLFLTGFTFDEVQTLEMEDFCRDFVALSFDQHNSTVVLDIMRSMAYLPGM 1016
Query: 157 GLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSL------------ 216
GLGR G E + + PFGLG+IPT+ D + + ++++ L
Sbjct: 1017 GLGRRQHGPREFVTFPDRDVPFGLGFIPTEADYRYMARLRRERVRARLTHTPFYYPVRPY 1076
Query: 217 ---------RRKEKRKAVESEI-----EEEYQLQLMFTQ----DGAAGEQGMVSMKIANP 276
R E + I +E +LQ + Q DGA G V + +P
Sbjct: 1077 TMSLADYFVRASEPHAPSDGIIGGLSTTQEAELQRLVQQLQLSDGAPGPSASVLIAPPSP 1136
Query: 277 VAKDPSTLIIP---------------TDGAPPNWSSLPQLQSFSVRD----EPVLVKSVE 336
TL P DGA P + ++ + S+ P + S
Sbjct: 1137 DRTSLMTLCFPDEIDDHGTFAEIGDVEDGAVPRDEYIDEMLAMSLSQTEEIAPPELASPF 1196
Query: 337 SLFNVTSLE--DGLQSVPSVSVIISEVELALEARESVI------KELM-------VCNEM 396
LF V+ E +Q P++ V + +V +A++ + + +L+ V +
Sbjct: 1197 DLFGVSVFEIAGEIQVAPTLEV-VEDVVVAVDLFDGPVGLVEGASDLVDPPLPFDVLSGF 1256
Query: 397 KSRVAYVSENGG------EIRGNEGSTLMEETQPIHLGTTDEPQEVRIGTTLTLEE---W 428
SR YVS+ E S + +T+ + GT D+P+E+RIG+ L+ +E
Sbjct: 1257 VSRHDYVSDFSSMDLSTFEPVDQRVSPAVGDTEIVDFGTADQPRELRIGSDLSTDERDSL 1316
BLAST of Lag0011633 vs. ExPASy TrEMBL
Match:
A0A438GNF1 (Transposon Ty3-G Gag-Pol polyprotein OS=Vitis vinifera OX=29760 GN=TY3B-G_163 PE=4 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 8.0e-18
Identity = 94/340 (27.65%), Postives = 162/340 (47.65%), Query Frame = 0
Query: 97 PVREIQH-DENLELAGFQFKQVQVIELAEPVKEYLALP-DFSDNVFVREIFRSMCHLPGS 156
PV EI H D++L L GF F +VQ +E+ + ++++A+ D + V +I RSM +LPG
Sbjct: 19 PVLEISHTDDDLFLTGFTFDEVQTVEIEDFCRDFVAMSFDRHGSTVVLDIMRSMSYLPGM 78
Query: 157 GLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSLRRKEKRKAVESE 216
GLGR G E I + + PFGLG+IPT+ D + +K++ L +
Sbjct: 79 GLGRRQHGPSEFIAIPDHDVPFGLGFIPTEADYLYMARLRKERVRARLTHTPFYYPLRPY 138
Query: 217 IEEEYQLQLMFTQDGAAGEQGMVSMKIANPVAKDPSTLIIPTDGAPPNWSSLPQLQSFSV 276
+ ++ A + G +S P S+ DGA P+ + ++ + S+
Sbjct: 139 TRSLADYFVRASEPDPARDIGGLS-TTRRPSFSALSSSRDVVDGAAPHDEYIDEMLALSL 198
Query: 277 ----RDEPVLVKSVESLFNVTSLEDGLQSVPSVSVIISEVELALEARESVIKELMVCNEM 336
R P L + + D S +S +S ++ + + I + + ++
Sbjct: 199 SRSRRVHPGLTSPFDLFGGASDFVDPPLSFDVLSGFVSRSDIVSDIFD--IDDEIAQHDS 258
Query: 337 KSRVAYVSENGGEIRGNEGSTLMEETQPIHLGTTDEPQEVRIGTTLTLEE---WLDLLKE 396
+ VS++ + S + +T+ + GT D+P+E+RIG+ L+ +E + LL+
Sbjct: 259 DDDSSSVSDS--DPVDQRVSPAVGDTEIVDFGTADQPRELRIGSDLSTDERDSLIQLLRA 318
Query: 397 YKDAFAWFYDDMPGLSTERISKTSLCILDAKLVKQKLWRM 428
Y D FAW Y+DMPGL + + A+ VKQKL R+
Sbjct: 319 YLDVFAWSYEDMPGLDPSIVQHRLPLLPHARPVKQKLRRL 353
BLAST of Lag0011633 vs. ExPASy TrEMBL
Match:
A0A438CNR0 (Retrovirus-related Pol polyprotein from transposon 297 OS=Vitis vinifera OX=29760 GN=pol_2509 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 5.2e-17
Identity = 105/398 (26.38%), Postives = 172/398 (43.22%), Query Frame = 0
Query: 97 PVREIQH-DENLELAGFQFKQVQVIELAEPVKEYLALP-DFSDNVFVREIFRSMCHLPGS 156
PV EI H D++L L GF F +VQ +E+ + ++++A+P D N V +I RSM +LPG
Sbjct: 582 PVLEISHTDDDLFLTGFTFDEVQTVEIEDFCRDFVAMPFDQHGNTVVLDIMRSMSYLPGM 641
Query: 157 GLGRCHQGIVEPIHVQAIEPPFGLGYIPTKEDLQKLEDKKKKKKNKSL------------ 216
GLGR G E I + + PFGLG++PT+ D + +K++ L
Sbjct: 642 GLGRRQHGPSEFITIPDHDVPFGLGFVPTEADYLYMARLRKERVRARLTHTPFYYPLRPY 701
Query: 217 ---------RRKEKRK---------AVESEIEEEYQLQLMFTQDGAAGEQGMVSMKIANP 276
R E + E E + +Q + +DGA G V + ++P
Sbjct: 702 TRSLADYFVRASEPHAPSDGIVGGLSTTQEAELQRLVQQLRLRDGAPGPSTSVLIAPSSP 761
Query: 277 VAKDPSTLIIPTD--------------GAPPNWSSLPQLQSFS--VRDEPVLVKSVESLF 336
TL P + P S+ L F + +V+
Sbjct: 762 DRTSLMTLCFPDEINEHGTLAELAEESLTAPALESVKDLIPFDDLIDSHVGIVEGASDFV 821
Query: 337 NVTSLEDGLQSVPSVSVIISEV---ELALEARESVI--KELMVCNEMKSRVAYVSENGGE 396
+ D L S S I+S+V +L++ SV +L + S++ Y+ + +
Sbjct: 822 DPPLSFDVLSGFVSRSDIVSDVSSMDLSIFEYFSVSCDIDLSAPSSPTSQIFYIDDEIAQ 881
Query: 397 IRGNEGSTLMEETQP--------------IHLGTTDEPQEVRIGTTLTLEE---WLDLLK 425
++ S+ + ++ P + GT D+P+E+RIG+ L+ +E + LL+
Sbjct: 882 HDSDDDSSSVSDSDPVDQRVSPAVGDTEIVDFGTADQPRELRIGSDLSTDERDSLIQLLR 941
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
EEF27092.1 | 2.0e-47 | 66.49 | conserved hypothetical protein [Ricinus communis] | [more] |
EEF25156.1 | 1.6e-33 | 74.07 | conserved hypothetical protein, partial [Ricinus communis] | [more] |
RVW53436.1 | 1.5e-18 | 28.08 | Retrovirus-related Pol polyprotein from transposon 17.6 [Vitis vinifera] | [more] |
XP_019078464.1 | 7.4e-18 | 26.36 | PREDICTED: uncharacterized protein LOC109123373 [Vitis vinifera] | [more] |
RVW73736.1 | 1.6e-17 | 27.65 | Transposon Ty3-G Gag-Pol polyprotein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
B9TAM0 | 9.7e-48 | 66.49 | G-patch domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_2021640 PE... | [more] |
B9TG58 | 7.9e-34 | 74.07 | G-patch domain-containing protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM... | [more] |
A0A438F0H3 | 7.2e-19 | 28.08 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Vitis vinifera OX=297... | [more] |
A0A438GNF1 | 8.0e-18 | 27.65 | Transposon Ty3-G Gag-Pol polyprotein OS=Vitis vinifera OX=29760 GN=TY3B-G_163 PE... | [more] |
A0A438CNR0 | 5.2e-17 | 26.38 | Retrovirus-related Pol polyprotein from transposon 297 OS=Vitis vinifera OX=2976... | [more] |
Match Name | E-value | Identity | Description | |