Lag0011620 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGCCCTGAAGATGTGAAAGATGCATTCGAAATGCACCCGCAAACCAATAAGGAAAGTAGCCCCTATAGGGAACGTGGTCCCGATGCAGCAAAAGCAGTTTCAGGAACAATTCGTAATTAATTTAGAATTATGAAATACTAATACACTAGCATCATACATACATTCATAATCTAATGAATATCTTGATTAAGCATGCTGAAAATCTATAGAATCTAATTCTATCCAAAATTTGGTTTGAGGAATAGAATTTAAATTTACCCCTTTGAGTTTGATTTAGGTAAGAGTTTAGCTATACCCAATTTAATTTAATTCAAATCGAATCAAATTCAAAATTTATCCAATTTATCTTTTGGACCAAATTTGAATTTTTTATTCAAAATTTATTTAAATCAAATTATGCACTTGGATTATGATTTGAGTTGGAATTTCTAATTTGACAATTATTTCAGAAGATTGGATTTGAACTAAAATTAAATCAAATGATATCTTCATGATTTAAAATTAAATCAAATTAATTTAAACAAGTCTCATACTCTTGAAACAAAACATCCAATTTGATAAGGATTGTTATTGAAAATAGGATTTGATAAGATATGAGATTTGAACTCCAAATTCCCCTTTATAAATAGGGCTCAAATGTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTCGGCAGCAGGTAAACTCTTTACTTTTTTTTTAACTTTGCATTTTTTTTCTAGTTTTTTTTTCAACGCTAAATTCAAAATTTACTTCTTCCTTGCACCTGCTCGCCCCTTTTTTGGGCCACTTCGAATTGTTTACGAAAAAAGAGACTGAGGCAACGACGCTGGAATCACTCGCAGCACAAGCGGCGTGACGGTGGCCAGAGCAAAGGAGGGGGGAAGAGAGTTAGAGATAGAAACGAGAGAGAGGTCTACGATGTTGAGAGAGAGAAAAAAAATGGAGAAGATAGTGAGAGAAAGAATGTGGTGGGAGAGAGAGAAGCAATTGTGAAGAAACCCGTCACTTCCTTTTTTTTTAAATTTTTTTTATTTCCTTTTTAACTTTTCACTCTCTGACTTTTTTTTTTTAATATATCCTTTAACTTAATTTTTTTTTTTTTTTTACTTTTCTTCACCCTTTTTTTTCTTTTTTTTTTAACTTTTTTTTTATTTTCACATTTTCAAGATTTCTTTTCTTTTTAATGCTTTCTTTGATATATATACATATGTAAAATTTAATTTGTGCAATATTTGTACATATGCATATAATCCAAACACCTTATTATTATTATTTTTTTTGTAGGAACAATCTTCATAATCCTTGCTTATAGCTCATAAAGGTAAACTTCCAAAGTAAACCGACATTGAATAATTTCAAATTTTCCATAAGCTTCCAACATCTTTTATTTGATTTGATTTGATGTTTTTTTTTTCTTTGCCCCCTTTTTGTAAGGAAATATATATATATATATATATATATATATATATATATATATATATATATTTGAAAGCCCTTTGCCCCTCAATTCAAGAGACAAATTTCTAAGTAAACCTTCTTTTTTTATCATTTTTTTAACATCCATCTTTTTCTGAATTAACACCACATCATAAATATTCCAATTGCACAAACATAATTTCCATTCACCAAAAGGTAAATTAGGTGAACGTTTTTTTTTTGTAGTGTTGTTTTCTTATTTTCAGGTACAATGTCTTTCAGCATTAGTACAAAGACACATGATGTCTTTGGACTTTTGTTGTTATGACGTTTCTCGTCCAAATGACACATGATGTCATTCCCACTTGGACTACTTCACTGCTGCAACATCTTTCAACATTAGTACAAGGACACATGATGTCTTTGGAATTTTGTTTTTATGACATCCCCCGACCCAAGGACACATGATGCCATTCCCACTTGGGCTCCTTCACTGCTGCAACGTCTTTCAGCATTAGTACAAGGACACATGATGTCTTTGGACTTTTGTTGTTATGATGTCCCACAGCCCAAGGATACATGATGTCATTCCCACTTGGGCTCCTTCACTGCTACAACGTCTTTCAGCATTAGTACAAGGACACATGTTGTCTTTGGACTTTTGTTTTTATGGCGTCTCTTGGCCAAGGACACATGATGTTATTCCCACTTAGGCTCCTTCACTGCTGCAACGTCTTTCAGTATTAGTACAAGGACACATGATGTCTTCTGACTTTTGTTGTTATGACGTCCTCTGGCCCAAGGACACATGATGTCATTTCCACTTGGGCTCCTTCAATGCTTCAACGTCTTTCAACATCAGTACAAGGACACATGATGTTTTTGGACTTTTGTTGTTATGACTTCCCCTGGCCCAAGGACACATGATGTCATTCCTACTTGGACTCCTTCACTGCTGCAACGTCTTTCAGCATTAGTACAAGGACACATGATGTCTTTGGACTTTTTTTGTCATGGTGTTTCGCAACATTAGTCCTAGGAAATTTTCCTTTGCATTATTATTATTTTTTATAACTTATCTTCGTAAAAATTTTATTCTTTTTATTTGTGCTAACTCTCATCTCTTTAAATTTTTCAGAGTCATGGTGTGTTTTACAAAACACATTGTCTCCGATAAGACGTACCTCGTTCTCTTGATAGATAACAATCAACCCATAAGAAGCAGGCTCAGCTTCTTAGTAGAAGAGTCTAAAATCGATCGTTTTGTAGCCCAATGGCCTCCACCACTAAATCTGCATACCATTTCTGACTGGTCCGTAGAGAGGCCTCTGGACCGAGATTCTAAGGTTTGATTTCTAGAATCTTCAATCCATACACAAAATCCTAGTTGACATCTAGAGGTTAGGACACCGAATAATTGATGGATCAGTTCGTTGGGAATCCGCATTGAAAATTACAAGCGAATTTCTTTTTATTCCTCGCTACTAGGAGTGGCTGGAATTTGTCGTTGGTCGGAATGAAGAGGTGTTTCCGACTGCTCGTTTATTGGTTGCAGTGATGGCTTCCCTTTACACTTATGATCGAAACAACGATATAGTTCGGGCTTTTTGTGAAACTTGGTGTCCTGCAACCAATACACTTCACACTCTGCAGGAAAACTTTCAATTTCCTTATGTGATCTTTGGACATTTGGGGGTCTGCCCATCAAAGGTAGATTTTATGAGGAAGTTATCCCTAATTTTAAAGAGTTAACTGGATCAAACAACCAAGAGAAGTATCTTGCAAAAAGCTGCAAACACCTTTTCCATGCATTCTACTTGCTTAGCGCTTCAAGAACTATTCATTCCCATGTTCCAATAAGCTCCTAGACCTCCTTTTGGTTCAAAGGTGAACAGAGGTACACATAGTCTCCTCAACGGAGACCCAAGAAAACCTCTTGCCCTAGCACTACTCATAACCCAGACGACAAAAATTTTAAGCGTCACGAGTGGTCAAATGAGGAGAACAACTTGTTTCACGAGTTAAAGATTGATATGAAACACAAGGACCAGACATACTTGGCGACCTTTTTATCTTGTTGGCTTTGCGCCTTTGTGTTTCCCCAAGGGAATGCTAACCACATTTGTCCCAGTGTTTTTAAAGCTGCCAGCTTAATGGCCGAGGGGAAAACTTTTAGTCTTGCAATCCCCGTCCTTGCCAACATCTACCATGGGTTAGGCAAAGTTTCCAATGCTTCCATTTCAGTTAGACGCATAGATGCTTCTCTCCGCGTGCATTACATTTTTGGTTGGCTCGCCCATTACTTTGGTACCAATTATAAGACTCCAGTGAAAGTTCAAGGTCCTAGCATGATTGAATTTTCCGGCGAAGGTGGAGCTATATATTTTGATGAGGTCGAGGCTCGTGAATTAATCCATGGGGGTGCATCCATATCATGCCACACGAACCTTAGTAGGAACAAAAATGAAATCATAAAGCATGAAAAGATTACGAAATTTATACCTTCTTCCTATTTCTCGTGCCTTCGCTCATGCTATTTGTCAGCGTGA ATGTCTGGCCCTGAAGATGTGAAAGATGCATTCGAAATGCACCCGCAAACCAATAAGGAAAGTAGCCCCTATAGGGAACGTGGTCCCGATGCAGCAAAAGCAGTTTCAGGAACAATTCATAACAATCAACCCATAAGAAGCAGGCTCAGCTTCTTAGTAGAAGAGTCTAAAATCGATCGTTTTGTAGCCCAATGGCCTCCACCACTAAATCTGCATACCATTTCTGACTGGTCCGTAGAGAGGCCTCTGGACCGAGATTCTAAGGAGTGGCTGGAATTTGTCGTTGGTCGGAATGAAGAGGTGTTTCCGACTGCTCGTTTATTGGTTGCAGTGATGGCTTCCCTTTACACTTATGATCGAAACAACGATATAGTTCGGGCTTTTTGTGAAACTTGGTGTCCTGCAACCAATACACTTCACACTCTGCAGGAAAACTTTCAATTTCCTTATGTGATCTTTGGACATTTGGGGGTCTGCCCATCAAAGTCTCCTCAACGGAGACCCAAGAAAACCTCTTGCCCTAGCACTACTCATAACCCAGACGACAAAAATTTTAAGCGTCACGAGTGGTCAAATGAGGAGAACAACTTGTTTCACGAGTTAAAGATTGATATGAAACACAAGGACCAGACATACTTGGCGACCTTTTTATCTTGTTGGCTTTGCGCCTTTGTGTTTCCCCAAGGGAATGCTAACCACATTTGTCCCAGTGTTTTTAAAGCTGCCAGCTTAATGGCCGAGGGGAAAACTTTTAGTCTTGCAATCCCCGTCCTTGCCAACATCTACCATGGGTTAGGCAAAGTTTCCAATGCTTCCATTTCAGTTAGACGCATAGATGCTTCTCTCCGCGTGCATTACATTTTTGGTTGGCTCGCCCATTACTTTGGTACCAATTATAAGACTCCAGTGAAAGTTCAAGGTCCTAGCATGATTGAATTTTCCGGCGAAGGTGGAGCTATATATTTTGATGAGGTCGAGGCTCGTGAATTAATCCATGGGGGTGCATCCATATCATGCCACACGAACCTTAGTAGGAACAAAAATGAAATCATAAAGCATGAAAAGATTACGAAATTTATACCTTCTTCCTATTTCTCGTGCCTTCGCTCATGCTATTTGTCAGCGTGA ATGTCTGGCCCTGAAGATGTGAAAGATGCATTCGAAATGCACCCGCAAACCAATAAGGAAAGTAGCCCCTATAGGGAACGTGGTCCCGATGCAGCAAAAGCAGTTTCAGGAACAATTCATAACAATCAACCCATAAGAAGCAGGCTCAGCTTCTTAGTAGAAGAGTCTAAAATCGATCGTTTTGTAGCCCAATGGCCTCCACCACTAAATCTGCATACCATTTCTGACTGGTCCGTAGAGAGGCCTCTGGACCGAGATTCTAAGGAGTGGCTGGAATTTGTCGTTGGTCGGAATGAAGAGGTGTTTCCGACTGCTCGTTTATTGGTTGCAGTGATGGCTTCCCTTTACACTTATGATCGAAACAACGATATAGTTCGGGCTTTTTGTGAAACTTGGTGTCCTGCAACCAATACACTTCACACTCTGCAGGAAAACTTTCAATTTCCTTATGTGATCTTTGGACATTTGGGGGTCTGCCCATCAAAGTCTCCTCAACGGAGACCCAAGAAAACCTCTTGCCCTAGCACTACTCATAACCCAGACGACAAAAATTTTAAGCGTCACGAGTGGTCAAATGAGGAGAACAACTTGTTTCACGAGTTAAAGATTGATATGAAACACAAGGACCAGACATACTTGGCGACCTTTTTATCTTGTTGGCTTTGCGCCTTTGTGTTTCCCCAAGGGAATGCTAACCACATTTGTCCCAGTGTTTTTAAAGCTGCCAGCTTAATGGCCGAGGGGAAAACTTTTAGTCTTGCAATCCCCGTCCTTGCCAACATCTACCATGGGTTAGGCAAAGTTTCCAATGCTTCCATTTCAGTTAGACGCATAGATGCTTCTCTCCGCGTGCATTACATTTTTGGTTGGCTCGCCCATTACTTTGGTACCAATTATAAGACTCCAGTGAAAGTTCAAGGTCCTAGCATGATTGAATTTTCCGGCGAAGGTGGAGCTATATATTTTGATGAGGTCGAGGCTCGTGAATTAATCCATGGGGGTGCATCCATATCATGCCACACGAACCTTAGTAGGAACAAAAATGAAATCATAAAGCATGAAAAGATTACGAAATTTATACCTTCTTCCTATTTCTCGTGCCTTCGCTCATGCTATTTGTCAGCGTGA MSGPEDVKDAFEMHPQTNKESSPYRERGPDAAKAVSGTIHNNQPIRSRLSFLVEESKIDRFVAQWPPPLNLHTISDWSVERPLDRDSKEWLEFVVGRNEEVFPTARLLVAVMASLYTYDRNNDIVRAFCETWCPATNTLHTLQENFQFPYVIFGHLGVCPSKSPQRRPKKTSCPSTTHNPDDKNFKRHEWSNEENNLFHELKIDMKHKDQTYLATFLSCWLCAFVFPQGNANHICPSVFKAASLMAEGKTFSLAIPVLANIYHGLGKVSNASISVRRIDASLRVHYIFGWLAHYFGTNYKTPVKVQGPSMIEFSGEGGAIYFDEVEARELIHGGASISCHTNLSRNKNEIIKHEKITKFIPSSYFSCLRSCYLSA Homology
BLAST of Lag0011620 vs. NCBI nr
Match: KAA0042070.1 (hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa] >TYK18012.1 hypothetical protein E5676_scaffold306G003250 [Cucumis melo var. makuwa]) HSP 1 Score: 278.1 bits (710), Expect = 1.1e-70 Identity = 149/307 (48.53%), Postives = 189/307 (61.56%), Query Frame = 0
BLAST of Lag0011620 vs. NCBI nr
Match: KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 276.9 bits (707), Expect = 2.5e-70 Identity = 161/367 (43.87%), Postives = 195/367 (53.13%), Query Frame = 0
BLAST of Lag0011620 vs. NCBI nr
Match: KAA0025356.1 (hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]) HSP 1 Score: 275.4 bits (703), Expect = 7.3e-70 Identity = 169/431 (39.21%), Postives = 211/431 (48.96%), Query Frame = 0
BLAST of Lag0011620 vs. NCBI nr
Match: KAA0060611.1 (hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]) HSP 1 Score: 272.7 bits (696), Expect = 4.7e-69 Identity = 147/317 (46.37%), Postives = 181/317 (57.10%), Query Frame = 0
BLAST of Lag0011620 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 1.8e-68 Identity = 153/352 (43.47%), Postives = 196/352 (55.68%), Query Frame = 0
BLAST of Lag0011620 vs. ExPASy TrEMBL
Match: A0A5D3D2A0 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003250 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.4e-71 Identity = 149/307 (48.53%), Postives = 189/307 (61.56%), Query Frame = 0
BLAST of Lag0011620 vs. ExPASy TrEMBL
Match: A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70 Identity = 161/367 (43.87%), Postives = 195/367 (53.13%), Query Frame = 0
BLAST of Lag0011620 vs. ExPASy TrEMBL
Match: A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 3.5e-70 Identity = 169/431 (39.21%), Postives = 211/431 (48.96%), Query Frame = 0
BLAST of Lag0011620 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69 Identity = 147/317 (46.37%), Postives = 181/317 (57.10%), Query Frame = 0
BLAST of Lag0011620 vs. ExPASy TrEMBL
Match: A0A5D3BRA8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00620 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68 Identity = 146/317 (46.06%), Postives = 180/317 (56.78%), Query Frame = 0
BLAST of Lag0011620 vs. TAIR 10
Match: AT1G51538.1 (Aminotransferase-like, plant mobile domain family protein ) HSP 1 Score: 57.8 bits (138), Expect = 2.2e-08 Identity = 49/191 (25.65%), Postives = 80/191 (41.88%), Query Frame = 0
BLAST of Lag0011620 vs. TAIR 10
Match: AT1G50820.1 (Aminotransferase-like, plant mobile domain family protein ) HSP 1 Score: 51.2 bits (121), Expect = 2.1e-06 Identity = 62/243 (25.51%), Postives = 96/243 (39.51%), Query Frame = 0
BLAST of Lag0011620 vs. TAIR 10
Match: AT1G50750.1 (Plant mobile domain protein family ) HSP 1 Score: 50.4 bits (119), Expect = 3.5e-06 Identity = 50/185 (27.03%), Postives = 76/185 (41.08%), Query Frame = 0
BLAST of Lag0011620 vs. TAIR 10
Match: AT1G32120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 6.0e-06 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = 0
BLAST of Lag0011620 vs. TAIR 10
Match: AT1G50790.1 (Plant mobile domain protein family ) HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05 Identity = 50/206 (24.27%), Postives = 83/206 (40.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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