Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACCACCCACGACAGTACCATCTCAATAGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAAATCAATGTAGGGAGCATAATTAGGGATGAGATTTTAGCCTGTGGAAGGAAAAAGGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATTGTTCCAGACAAGGACGAGGAGCGTCATTTATTTAAGCCGACCATTGACTTGTCCTTGATAGGGAAGCTCCAACAGAATAGCATCCAGAGGAAAGATAAAGCCTCCATATCTCAGGCCACTCCACCTTCAGGGCCGAGCATGGGTTCTCCATCCCAGCACACTCCTTTCACAGGGCCTTCACGGTCATCAGAAGCCCTAGCTATTGCCTACCTCCAGTTAGATCAAAGCAGGGTCAACCTGAGAACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATTGCTCCGGTCTTTCCAGATTTCCCTCAGTCGCTGCTACCTCAAGAAGACAAGGATTTTGATGAAGAGGATGATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGACGAGGACTAG
mRNA sequence
ATGCCAACCACCCACGACAGTACCATCTCAATAGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAAATCAATGTAGGGAGCATAATTAGGGATGAGATTTTAGCCTGTGGAAGGAAAAAGGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATTGTTCCAGACAAGGACGAGGAGCGTCATTTATTTAAGCCGACCATTGACTTGTCCTTGATAGGGAAGCTCCAACAGAATAGCATCCAGAGGAAAGATAAAGCCTCCATATCTCAGGCCACTCCACCTTCAGGGCCGAGCATGGGTTCTCCATCCCAGCACACTCCTTTCACAGGGCCTTCACGGTCATCAGAAGCCCTAGCTATTGCCTACCTCCAGTTAGATCAAAGCAGGGTCAACCTGAGAACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATTGCTCCGGTCTTTCCAGATTTCCCTCAGTCGCTGCTACCTCAAGAAGACAAGGATTTTGATGAAGAGGATGATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGACGAGGACTAG
Coding sequence (CDS)
ATGCCAACCACCCACGACAGTACCATCTCAATAGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAAATCAATGTAGGGAGCATAATTAGGGATGAGATTTTAGCCTGTGGAAGGAAAAAGGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATTGTTCCAGACAAGGACGAGGAGCGTCATTTATTTAAGCCGACCATTGACTTGTCCTTGATAGGGAAGCTCCAACAGAATAGCATCCAGAGGAAAGATAAAGCCTCCATATCTCAGGCCACTCCACCTTCAGGGCCGAGCATGGGTTCTCCATCCCAGCACACTCCTTTCACAGGGCCTTCACGGTCATCAGAAGCCCTAGCTATTGCCTACCTCCAGTTAGATCAAAGCAGGGTCAACCTGAGAACTTATTGGGCATATGCAAAGGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATTGCTCCGGTCTTTCCAGATTTCCCTCAGTCGCTGCTACCTCAAGAAGACAAGGATTTTGATGAAGAGGATGATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGACGAGGACTAG
Protein sequence
MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRVKIVPDKDEERHLFKPTIDLSLIGKLQQNSIQRKDKASISQATPPSGPSMGSPSQHTPFTGPSRSSEALAIAYLQLDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDFDEEDDENDEEENEEKESSSDED
Homology
BLAST of Lag0011614 vs. NCBI nr
Match:
PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])
HSP 1 Score: 90.1 bits (222), Expect = 2.4e-14
Identity = 66/204 (32.35%), Postives = 105/204 (51.47%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LLY ++ G INVG +I EI AC +K+G LFF SLITQLC+
Sbjct: 57 LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKL-QQNSIQRKDKASISQAT-PPSGPSMGSPSQHTPF 120
+ +EE+ ID + ++ Q+ + + S S+ T S + G Q
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176
Query: 121 TGPSRSSEALAIAYLQ--LDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 180
S + + ++ L + + +WAY+KERD A+++ + P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236
Query: 181 SLLPQEDKDFDEEDDENDEEENEE 201
LL D +++ E D++ E E
Sbjct: 237 ELLQDLDYEYEAESDKDGSNEAAE 260
BLAST of Lag0011614 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 85.1 bits (209), Expect = 7.7e-13
Identity = 63/204 (30.88%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LL+ ++ G INVG +I EI AC +K G LFF SLIT+LC+
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQN--SIQRKDKASISQATPPSGPSMGSPSQHTPF 120
+ +EE+ ID + ++ Q + + +S AT S + G Q
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305
Query: 121 TGPSRSSEALAIAYLQ--LDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 180
S + + ++ L + + +WAY+KERD A+++ + P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365
Query: 181 SLLPQEDKDFDEEDDENDEEENEE 201
+L D +++ E D++ E E
Sbjct: 366 EILKDLDYEYEAESDKDGSNEAAE 389
BLAST of Lag0011614 vs. NCBI nr
Match:
KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])
HSP 1 Score: 84.0 bits (206), Expect = 1.7e-12
Identity = 53/153 (34.64%), Postives = 72/153 (47.06%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PT+HDST+S ER+ +LYCI+KG +INVG +I EI C + GKLFF LIT+ C+
Sbjct: 886 LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQNSIQRKDKASISQATPPSGPSMGSPSQHTPFTG 120
+ DE+ + RK S P P +PS T T
Sbjct: 946 NVPMLNDED-------------------PVPRKGVVSFE---PDRAPKRTTPSTTTASTS 1005
Query: 121 PSRSSEALAIAYLQLDQSRVNLRTYWAYAKERD 154
E L+ Q L+T+W Y +ERD
Sbjct: 1006 RDPMDERLSKHEALQQQMCERLQTHWNYERERD 1016
BLAST of Lag0011614 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 82.0 bits (201), Expect = 6.5e-12
Identity = 59/201 (29.35%), Postives = 102/201 (50.75%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH +S +R++LL+ ++ G INVG +I EI AC +K G LFF SLIT+LC+
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQNSIQRKDKASISQAT-PPSGPSMGSPSQHTPFT 120
+ ++++ L G++ ++ R + +++T PS + S
Sbjct: 176 PFLVNEEK----------LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNG 235
Query: 121 GPSRSSEALAIAYLQLDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLL 180
+ +AL Q + + + +WAY+KERD A+++ + P FP FPQ +L
Sbjct: 236 DVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL 295
Query: 181 PQEDKDFDEEDDENDEEENEE 201
D +++ E D++ E E
Sbjct: 296 QDLDYEYEAESDKDGSNEAAE 306
BLAST of Lag0011614 vs. NCBI nr
Match:
XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])
HSP 1 Score: 80.5 bits (197), Expect = 1.9e-11
Identity = 39/103 (37.86%), Postives = 66/103 (64.08%), Query Frame = 0
Query: 2 PTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRVK 61
PTTHDS+IS+E+++LLYC++ G INVG ++ IL C +++ GKLFF SLI +L +
Sbjct: 350 PTTHDSSISVEKIILLYCVVTGRTINVGKVVEKAILYCSKRRQGKLFFPSLIHKLLMQAG 409
Query: 62 IVPDKDE---ERHLFKPTIDLSLIGKLQQNSIQRKDKASISQA 102
+ D+ + K TID+ + KL++ S + ++ +++A
Sbjct: 410 VPEYTDDLVIKECEEKWTIDMKAVSKLRERSERGRELPGVTRA 452
BLAST of Lag0011614 vs. ExPASy TrEMBL
Match:
A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14
Identity = 66/204 (32.35%), Postives = 105/204 (51.47%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LLY ++ G INVG +I EI AC +K+G LFF SLITQLC+
Sbjct: 57 LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKL-QQNSIQRKDKASISQAT-PPSGPSMGSPSQHTPF 120
+ +EE+ ID + ++ Q+ + + S S+ T S + G Q
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176
Query: 121 TGPSRSSEALAIAYLQ--LDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 180
S + + ++ L + + +WAY+KERD A+++ + P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236
Query: 181 SLLPQEDKDFDEEDDENDEEENEE 201
LL D +++ E D++ E E
Sbjct: 237 ELLQDLDYEYEAESDKDGSNEAAE 260
BLAST of Lag0011614 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 3.7e-13
Identity = 63/204 (30.88%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LL+ ++ G INVG +I EI AC +K G LFF SLIT+LC+
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQN--SIQRKDKASISQATPPSGPSMGSPSQHTPF 120
+ +EE+ ID + ++ Q + + +S AT S + G Q
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305
Query: 121 TGPSRSSEALAIAYLQ--LDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 180
S + + ++ L + + +WAY+KERD A+++ + P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365
Query: 181 SLLPQEDKDFDEEDDENDEEENEE 201
+L D +++ E D++ E E
Sbjct: 366 EILKDLDYEYEAESDKDGSNEAAE 389
BLAST of Lag0011614 vs. ExPASy TrEMBL
Match:
A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 8.3e-13
Identity = 53/153 (34.64%), Postives = 72/153 (47.06%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PT+HDST+S ER+ +LYCI+KG +INVG +I EI C + GKLFF LIT+ C+
Sbjct: 886 LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQNSIQRKDKASISQATPPSGPSMGSPSQHTPFTG 120
+ DE+ + RK S P P +PS T T
Sbjct: 946 NVPMLNDED-------------------PVPRKGVVSFE---PDRAPKRTTPSTTTASTS 1005
Query: 121 PSRSSEALAIAYLQLDQSRVNLRTYWAYAKERD 154
E L+ Q L+T+W Y +ERD
Sbjct: 1006 RDPMDERLSKHEALQQQMCERLQTHWNYERERD 1016
BLAST of Lag0011614 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 3.2e-12
Identity = 59/201 (29.35%), Postives = 102/201 (50.75%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH +S +R++LL+ ++ G INVG +I EI AC +K G LFF SLIT+LC+
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQNSIQRKDKASISQAT-PPSGPSMGSPSQHTPFT 120
+ ++++ L G++ ++ R + +++T PS + S
Sbjct: 176 PFLVNEEK----------LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNG 235
Query: 121 GPSRSSEALAIAYLQLDQSRVNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLL 180
+ +AL Q + + + +WAY+KERD A+++ + P FP FPQ +L
Sbjct: 236 DVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL 295
Query: 181 PQEDKDFDEEDDENDEEENEE 201
D +++ E D++ E E
Sbjct: 296 QDLDYEYEAESDKDGSNEAAE 306
BLAST of Lag0011614 vs. ExPASy TrEMBL
Match:
W9RPD1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026905 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 7.8e-11
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 0
Query: 1 MPTTHDSTISIERVMLLYCIMKGLEINVGSIIRDEILACGRKKAGKLFFGSLITQLCQRV 60
MP++H + ER +LL+C+MKG +NVG +I ++ C + G L+F SLITQLC
Sbjct: 24 MPSSHYRLVHKERAILLHCMMKGRPLNVGRMIHQQVGVCAGHRNGGLWFPSLITQLCIAH 83
Query: 61 KIVPDKDEERHLFKPTIDLSLIGKLQQNSIQRKDKASISQATPPS-GPSMGSPSQHTPFT 120
+ +K E + I ++ +L + Q ++ A A P G P+
Sbjct: 84 GVSVEKHETKEPPSAAISTFVLARLLHDDAQEEEAAPAPAANAPHLGEPTAEPNSPDIVA 143
Query: 121 GPSRSSEALAIAYLQLDQSRVNLRTYWAYAKERDEAI 157
S + L+ +Q +S +R +W Y K+RD A+
Sbjct: 144 RLSSMEQRLSQVEVQQYESAQQMREFWKYTKQRDLAL 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON59596.1 | 2.4e-14 | 32.35 | hypothetical protein PanWU01x14_158080 [Parasponia andersonii] | [more] |
PON46472.1 | 7.7e-13 | 30.88 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
KAF4375842.1 | 1.7e-12 | 34.64 | hypothetical protein G4B88_026421 [Cannabis sativa] | [more] |
PON78020.1 | 6.5e-12 | 29.35 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
XP_024971944.1 | 1.9e-11 | 37.86 | uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5CEY2 | 1.2e-14 | 32.35 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... | [more] |
A0A2P5BCG4 | 3.7e-13 | 30.88 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A7J6FZ22 | 8.3e-13 | 34.64 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1 | [more] |
A0A2P5DXM3 | 3.2e-12 | 29.35 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
W9RPD1 | 7.8e-11 | 29.94 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026905 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |