Lag0011612 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCTGCAGGTGGGACTCTGTTGTCGAAGATCATGGAGAACACGCGCACACTTCTGGAGGATATGGCCACCAACAGCTATCTGGTCATCTGAGTGGGCTGCACCTAAAAAGATTGATGCTAGAGTGTTCGAGATTTACAACGTAAGTGCACTTCAGGCCCAAATGTCTTCCCTTCCTTATGCTTTTCTGAAATTTTCAGGTACAGGGAGTGCTCAATCGATAGAGTCTGCAGTTGCCCTTGCATCACAGTCTTAGGAGGAGAATCTTGAGCAGGTTTAATATGTTCCTAATTTTAATTCTAGGGGATATAATAATAATTCTACACCTACACATTATCACCCTAGTAATAGAAATCATGAGAACTTCTCCTATAAAAATAATAAAAATGTGTTAAATCCTCCTGGTTTTGCCCCTCAAAGTCAAGAAAGTAAAAAATCTTTAGAAGATCTTGTTGGAGCTTTTATTGCAGAATCAAGTAATAAGACGAACAAGCTAGAGGAGGCCGTGATTGCCATAAACACTAGATGGCCATTTTGCAGCCATCAAGAACATTAAGACTCAGCTAGGACAACTGGTAAGTGTTGTCAACACTATGAACAAAGGTAAGGCCCTAGTTGACCAGGAAAAATCTCAGTTGGAGTACTGCAAGGCCATCACTGTGCATCAGGAGGAGGAGACTCAAGTAGCTGAGGAGGAGGAGACTACTGAACTAGAGGAACTTACTGACGAAGCTGAAGAGGGAACCACTTCAAACAAAGCTGAAAAGCTTAATCTTGAGCCCTCTATCCCTTCTCCTACTGTTTTAGTTCCTAATTTAAAGAATAAGAAAAAGAAAAATTCTAAGGCTAAGTTTGAAAAATTTCTAGATGCTTTTATGGGATTGAATGTTAATATTCCTTTTTCAGATGCCCTGGAGCAAATGCCTCATTAG ATGCAGCTGCAGGTGGGACTCTGTTGTCGAAGATCATGGAGAACACGCGCACACTTCTGGAGGATATGGCCACCAACAGCTATCTGGTCATCTGAGTGGGCTGCACCTAAAAAGATTGATGCTAGAGTGTTCGAGATTTACAACGTAAGTGCACTTCAGGCCCAAATGTCTTCCCTTCCTTATGCTTTTCTGAAATTTTCAGCCATCAAGAACATTAAGACTCAGCTAGGACAACTGGTAAGTGTTGTCAACACTATGAACAAAGGTAAGGCCCTAGTTGACCAGGAAAAATCTCAGTTGGAGTACTGCAAGGCCATCACTGTGCATCAGGAGGAGGAGACTCAAGTAGCTGAGGAGGAGGAGACTACTGAACTAGAGGAACTTACTGACGAAGCTGAAGAGGGAACCACTTCAAACAAAGCTGAAAAGCTTAATCTTGAGCCCTCTATCCCTTCTCCTACTGTTTTAGTTCCTAATTTAAAGAATAAGAAAAAGAAAAATTCTAAGGCTAAGTTTGAAAAATTTCTAGATGCTTTTATGGGATTGAATGTTAATATTCCTTTTTCAGATGCCCTGGAGCAAATGCCTCATTAG ATGCAGCTGCAGGTGGGACTCTGTTGTCGAAGATCATGGAGAACACGCGCACACTTCTGGAGGATATGGCCACCAACAGCTATCTGGTCATCTGAGTGGGCTGCACCTAAAAAGATTGATGCTAGAGTGTTCGAGATTTACAACGTAAGTGCACTTCAGGCCCAAATGTCTTCCCTTCCTTATGCTTTTCTGAAATTTTCAGCCATCAAGAACATTAAGACTCAGCTAGGACAACTGGTAAGTGTTGTCAACACTATGAACAAAGGTAAGGCCCTAGTTGACCAGGAAAAATCTCAGTTGGAGTACTGCAAGGCCATCACTGTGCATCAGGAGGAGGAGACTCAAGTAGCTGAGGAGGAGGAGACTACTGAACTAGAGGAACTTACTGACGAAGCTGAAGAGGGAACCACTTCAAACAAAGCTGAAAAGCTTAATCTTGAGCCCTCTATCCCTTCTCCTACTGTTTTAGTTCCTAATTTAAAGAATAAGAAAAAGAAAAATTCTAAGGCTAAGTTTGAAAAATTTCTAGATGCTTTTATGGGATTGAATGTTAATATTCCTTTTTCAGATGCCCTGGAGCAAATGCCTCATTAG MQLQVGLCCRRSWRTRAHFWRIWPPTAIWSSEWAAPKKIDARVFEIYNVSALQAQMSSLPYAFLKFSAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH Homology
BLAST of Lag0011612 vs. NCBI nr
Match: XP_024032903.1 (uncharacterized protein LOC112095347 [Morus notabilis]) HSP 1 Score: 71.6 bits (174), Expect = 8.4e-09 Identity = 48/132 (36.36%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of Lag0011612 vs. NCBI nr
Match: XP_024029937.1 (uncharacterized protein LOC112094091 [Morus notabilis]) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-07 Identity = 45/132 (34.09%), Postives = 78/132 (59.09%), Query Frame = 0
BLAST of Lag0011612 vs. NCBI nr
Match: XP_024024249.1 (uncharacterized protein LOC112092388 [Morus notabilis]) HSP 1 Score: 67.0 bits (162), Expect = 2.1e-07 Identity = 42/126 (33.33%), Postives = 75/126 (59.52%), Query Frame = 0
BLAST of Lag0011612 vs. NCBI nr
Match: KAG7947748.1 (hypothetical protein I3843_14G109500 [Carya illinoinensis]) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-06 Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Lag0011612 vs. NCBI nr
Match: KAG6734747.1 (hypothetical protein I3842_01G285500 [Carya illinoinensis]) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-06 Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Lag0011612 vs. ExPASy TrEMBL
Match: A0A1U8PZ99 (uncharacterized protein LOC104589245 OS=Nelumbo nucifera OX=4432 GN=LOC104589245 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06 Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Lag0011612 vs. ExPASy TrEMBL
Match: A0A1U7ZI47 (uncharacterized protein LOC104590859 OS=Nelumbo nucifera OX=4432 GN=LOC104590859 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06 Identity = 47/137 (34.31%), Postives = 80/137 (58.39%), Query Frame = 0
BLAST of Lag0011612 vs. ExPASy TrEMBL
Match: A0A1U7Z0W9 (uncharacterized protein LOC104589888 OS=Nelumbo nucifera OX=4432 GN=LOC104589888 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 4.2e-06 Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = 0
BLAST of Lag0011612 vs. ExPASy TrEMBL
Match: A0A151TZJ8 (Retrotrans_gag domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_005056 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-05 Identity = 42/146 (28.77%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of Lag0011612 vs. ExPASy TrEMBL
Match: A0A151T9N8 (Retrotrans_gag domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_018335 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.7e-05 Identity = 38/133 (28.57%), Postives = 71/133 (53.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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