Lag0011347 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011347
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPeptidase S74 domain-containing protein
Locationchr1: 22325636 .. 22326676 (+)
RNA-Seq ExpressionLag0011347
SyntenyLag0011347
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGA

mRNA sequence

ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGA

Coding sequence (CDS)

ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGA

Protein sequence

MTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKADDDRGDHPCRKLQSSK
Homology
[Close]
BLAST of Lag0011347 vs. NCBI nr
Match: XP_014676797.1 (PREDICTED: uncharacterized protein LOC106816689 [Priapulus caudatus])

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-08
Identity = 83/279 (29.75%), Postives = 113/279 (40.50%), Query Frame = 0 

Query: 2   TTVVTTPAGNYSHQSDWSRQ---------VVKSLQVKLMTTVVTTPAGNYSHQSDWSRQ- 61
           TT VT   GNY   +D +++         V K L+    TT VT    NY   +D +++ 
Sbjct: 93  TTDVTKELGNYDATTDVTKELGKIDATTDVTKELENYDATTDVTKELENYDATTDVTKEL 152

Query: 62  --------VVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYS 121
                   V K L+    TT VT    NY   +D    V K L+    TT VT   GNY 
Sbjct: 153 EKIDARTDVTKELENYDATTDVTKELENYDATTD----VTKELENYDATTDVTKELGNYD 212

Query: 122 HQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYS 181
             +D ++++ K           TT       + D +  V K L     TT VT    NY 
Sbjct: 213 ATTDVTKELGK--------IDATTDVTKELEKIDATTDVTKELGKIDATTDVTKELENYD 272

Query: 182 HQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYS 241
             +D    V K L+    TT VT         +D    V K L+    TT VT   GNY 
Sbjct: 273 ATTD----VTKELEKIDATTDVTKELAKIDATTD----VTKELENYDATTDVTKELGNYD 332

Query: 242 HQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQV 263
             +D    V K L+    TT VT   GNY   +D ++++
Sbjct: 333 ATTD----VTKELENYDATTDVTKELGNYDATTDVTKEL 347

[Close]
BLAST of Lag0011347 vs. ExPASy TrEMBL
Match: A0A6C0LDK3 (Peptidase S74 domain-containing protein (Fragment) OS=viral metagenome OX=1070528 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-10
Identity = 52/162 (32.10%), Postives = 94/162 (58.02%), Query Frame = 0 

Query: 2   TTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLM 61
           TTV+T+   N S+ S++ + V  +L   + TTV+T+   N S+ S++ + V  +L V + 
Sbjct: 6   TTVLTSIDSNNSNVSNYIKAVDSNLNNVINTTVLTSIDSNNSNVSNYIQAVDSNLNVIIN 65

Query: 62  TTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLM 121
           TTV+T+   N S+ S++ + V  +L V + TTV+T+   N S+ S++ + V  +L   + 
Sbjct: 66  TTVLTSIDSNNSNVSNYIKAVDSNLNVIINTTVLTSIDSNNSNVSNYIKAVDSNLNTIIN 125

Query: 122 TTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYS 164
           TTV+T+   N S+ S++ + V  +L  K++  +  T   NYS
Sbjct: 126 TTVLTSIDSNNSNVSNYIKAVDSNL--KVIINIKDTALSNYS 165

[Close]
BLAST of Lag0011347 vs. ExPASy TrEMBL
Match: A0A6C0LCS6 (Uncharacterized protein (Fragment) OS=viral metagenome OX=1070528 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-08
Identity = 49/161 (30.43%), Postives = 92/161 (57.14%), Query Frame = 0 

Query: 16  SDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQ 75
           S++   V  +L   + TTV+T+   N S+ S++ + V  +L   + TTV+T+   N S+ 
Sbjct: 119 SNYINAVDSNLNTIINTTVITSIDSNNSNVSNYIQAVDSNLNNIINTTVLTSIDSNNSNV 178

Query: 76  SDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQ 135
           S++ + V  +L V + TTV+T+   N S+ S++ + V  +L   + TTV+T+   N S+ 
Sbjct: 179 SNYIQAVDSNLNVIINTTVLTSIDSNNSNVSNYIQAVDSNLNNIINTTVLTSIDSNNSNV 238

Query: 136 SDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSL 177
           S++ + V  +L   + TTV+T+   N S+ S++ + V  +L
Sbjct: 239 SNYIKAVDSNLNNIINTTVLTSIDSNNSNVSNYIKAVDSNL 279

The following BLAST results are available for this feature:
BLAST of Lag0011347 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_014676797.11.1e-0829.75PREDICTED: uncharacterized protein LOC106816689 [Priapulus caudatus][more]
BLAST of Lag0011347 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0011347 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6C0LDK34.9e-1032.10Peptidase S74 domain-containing protein (Fragment) OS=viral metagenome OX=107052... [more]
A0A6C0LCS62.7e-0830.43Uncharacterized protein (Fragment) OS=viral metagenome OX=1070528 PE=4 SV=1[more]
BLAST of Lag0011347 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011347.1Lag0011347.1mRNA