Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTGTTCCCTTGGTAAGGGAATTTTATGCTAATGTTCAAGACAATGAACTCTTCCAAACCAAGGTGAGGGGAAAATGGATAGATTGGTCACCATCGACTATTAATGAGGTTTACAACCTTTCTAATTTCCCCCATGCGGTTTTCAACTCTATAGAGATTGCTCCATCTAAAGAGCAACTCTAATAAGCTCTAGAAACATGTGCAATTGAAGGAGCAAGTTGGAAAATGTCAAGGAACTCCATCTGAACACTGTTGGCATCTTACCTAAAGCCCGAGGCAAATGTATGGCATACCTTTGCAAGGAGTAGATTGCTCCCTACCACACATGACACCACTGTGTCCAAAGAAAGACCTCTTTTGGTTTTTTCCATCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATTTTGGCGTGTGCAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAGCTTTGTGTTTAAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATCTTAATGGACAAGGGTATAATTGATTCAGCATCTATAGCAAGGTTGCATGGGGTGAGTAAAGGGAGGTCAAGCAAAAATATGGTTTGTGGGGTTGAGGAGATTTTGAGGCAGCAGAGAAAAATGATGAGGCGAATGGAGCATAGTGAAAATCAGCAAAAGGCCTACTGGGAATACGCTCATCACAGAGACTCTGCCATGGAAAAGACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCCGCAAGTTTATTTGATCCATGGTACCCTTCCCCATCTCTAAGTGGGAATGATGATGATGTTGATGCTGATCAAGAAGATTGA
mRNA sequence
ATGGCTGTTGTTCCCTTGGTAAGGGAATTTTATGCTAATGTTCAAGACAATGAACTCTTCCAAACCAAGCCCGAGGCAAATGTATGGCATACCTTTGCAAGGAGTAGATTGCTCCCTACCACACATGACACCACTGTGTCCAAAGAAAGACCTCTTTTGGTTTTTTCCATCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATTTTGGCGTGTGCAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAGCTTTGTGTTTAAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATCTTAATGGACAAGGGTATAATTGATTCAGCATCTATAGCAAGGTTGCATGGGGTGAGTAAAGGGAGGTCAAGCAAAAATATGGTTTGTGGGGTTGAGGAGATTTTGAGGCAGCAGAGAAAAATGATGAGGCGAATGGAGCATAGTGAAAATCAGCAAAAGGCCTACTGGGAATACGCTCATCACAGAGACTCTGCCATGGAAAAGACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCCGCAAGTTTATTTGATCCATGGTACCCTTCCCCATCTCTAAGTGGGAATGATGATGATGTTGATGCTGATCAAGAAGATTGA
Coding sequence (CDS)
ATGGCTGTTGTTCCCTTGGTAAGGGAATTTTATGCTAATGTTCAAGACAATGAACTCTTCCAAACCAAGCCCGAGGCAAATGTATGGCATACCTTTGCAAGGAGTAGATTGCTCCCTACCACACATGACACCACTGTGTCCAAAGAAAGACCTCTTTTGGTTTTTTCCATCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATTTTGGCGTGTGCAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAGCTTTGTGTTTAAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATCTTAATGGACAAGGGTATAATTGATTCAGCATCTATAGCAAGGTTGCATGGGGTGAGTAAAGGGAGGTCAAGCAAAAATATGGTTTGTGGGGTTGAGGAGATTTTGAGGCAGCAGAGAAAAATGATGAGGCGAATGGAGCATAGTGAAAATCAGCAAAAGGCCTACTGGGAATACGCTCATCACAGAGACTCTGCCATGGAAAAGACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCCGCAAGTTTATTTGATCCATGGTACCCTTCCCCATCTCTAAGTGGGAATGATGATGATGTTGATGCTGATCAAGAAGATTGA
Protein sequence
MAVVPLVREFYANVQDNELFQTKPEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARLHGVSKGRSSKNMVCGVEEILRQQRKMMRRMEHSENQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQFPASLFDPWYPSPSLSGNDDDVDADQED
Homology
BLAST of Lag0010640 vs. NCBI nr
Match:
PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])
HSP 1 Score: 119.0 bits (297), Expect = 5.1e-23
Identity = 78/211 (36.97%), Postives = 115/211 (54.50%), Query Frame = 0
Query: 13 NVQDNELFQTK----PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRL 72
N+Q+ L K P A VW+ F +SRLLPTTH TVSK+R LL++S+L SI+VGR+
Sbjct: 28 NIQNRPLNAEKGALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRM 87
Query: 73 LAKEILACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARLHG---- 132
+ EI ACA RK G LFFP+LIT LC A+ +EE L G ID+ ++AR+
Sbjct: 88 IHSEIRACAARKSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQT 147
Query: 133 -------------VSKGRSSKNMVCGVEEILR-------QQRKMMRRMEHSENQQKAYWE 192
S R++ +++ ++ + + QQ MM ++H+ QQ+ +W
Sbjct: 148 ELTQQPSTSRPTVASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWA 207
Query: 193 YAHHRDSAMEKTFEYGFEELPQPFPQFPASL 196
Y+ RD+A++K + F FP FP L
Sbjct: 208 YSKERDTALKKALQNNFTRPIPTFPTFPQEL 238
BLAST of Lag0010640 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 115.5 bits (288), Expect = 5.6e-22
Identity = 81/218 (37.16%), Postives = 116/218 (53.21%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH TVSK+R LL+ S+L SI+VGR++ EI ACA RK G
Sbjct: 172 PAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGA 231
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL------------HGVSKGRSS 143
LFFP+LIT LC A+ +EE L + G ID+ ++AR+ +S
Sbjct: 232 LFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATAS 291
Query: 144 KNMVCG--------VEEILRQQR----KMMRRMEHSENQQKAYWEYAHHRDSAMEKTFEY 203
N G +E+ L QQ MM ++H+ QQ+ +W Y+ RD+A++K +
Sbjct: 292 SNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQN 351
Query: 204 GFEELPQPFPQFPASLFDPWYPSPSLSGNDDDVDADQE 218
F +P P FPA +P L D + +A+ +
Sbjct: 352 NF---TRPMPTFPA------FPQEILKDLDYEYEAESD 380
BLAST of Lag0010640 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 113.2 bits (282), Expect = 2.8e-21
Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH VSK+R LL+ S+L SI+VGR++ EI ACA +K G
Sbjct: 102 PAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGA 161
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL------HGVSKGRSSKNMVCG 143
LFFP+LIT LC A V+E++ L + G ID+ ++AR+ + SS+
Sbjct: 162 LFFPSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAAS 221
Query: 144 VE----EILRQQRKMMRRM---EHSENQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQ 203
++L+Q + + +R+ EH+ QQ+ +W Y+ RD+A++K + F +P P
Sbjct: 222 SSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNF---TRPIPT 281
Query: 204 FPASLFDPWYPSPSLSGNDDDVDADQE 218
FPA +P L D + +A+ +
Sbjct: 282 FPA------FPQEILQDLDYEYEAESD 297
BLAST of Lag0010640 vs. NCBI nr
Match:
PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])
HSP 1 Score: 100.5 bits (249), Expect = 1.9e-17
Identity = 61/145 (42.07%), Postives = 86/145 (59.31%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH TVSKER LL++S+L SI+VG+++ +EI A A RK G
Sbjct: 79 PPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHREICAYAARKSGA 138
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL---------HGVSKGRSSKNM 143
LFFP+LIT +C A+ +EE L + G ID+ ++AR+ H S R +
Sbjct: 139 LFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSHRPSSSRPAAAS 198
Query: 144 VCGVEEILRQQRKMMRRMEHSENQQ 160
E L+Q + + +R+ E QQ
Sbjct: 199 SSSTSETLQQLKSLEQRISQQEVQQ 223
BLAST of Lag0010640 vs. NCBI nr
Match:
PON65869.1 (hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii])
HSP 1 Score: 97.1 bits (240), Expect = 2.1e-16
Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH VSKE LL++S+L SI+VGR++ +EI ACA RK G
Sbjct: 10 PPAKVWYHFLKSRLLPTTHGKIVSKECVLLLYSMLTGKSINVGRIIHREICACAARKPGA 69
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL 123
LFFP+LIT +C A+ +EE L + G ID+ ++AR+
Sbjct: 70 LFFPSLITRMCRNARAPYLVNEEKLHNTGEIDAIAVARI 108
BLAST of Lag0010640 vs. ExPASy TrEMBL
Match:
A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 2.4e-23
Identity = 78/211 (36.97%), Postives = 115/211 (54.50%), Query Frame = 0
Query: 13 NVQDNELFQTK----PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRL 72
N+Q+ L K P A VW+ F +SRLLPTTH TVSK+R LL++S+L SI+VGR+
Sbjct: 28 NIQNRPLNAEKGALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRM 87
Query: 73 LAKEILACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARLHG---- 132
+ EI ACA RK G LFFP+LIT LC A+ +EE L G ID+ ++AR+
Sbjct: 88 IHSEIRACAARKSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQT 147
Query: 133 -------------VSKGRSSKNMVCGVEEILR-------QQRKMMRRMEHSENQQKAYWE 192
S R++ +++ ++ + + QQ MM ++H+ QQ+ +W
Sbjct: 148 ELTQQPSTSRPTVASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWA 207
Query: 193 YAHHRDSAMEKTFEYGFEELPQPFPQFPASL 196
Y+ RD+A++K + F FP FP L
Sbjct: 208 YSKERDTALKKALQNNFTRPIPTFPTFPQEL 238
BLAST of Lag0010640 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.7e-22
Identity = 81/218 (37.16%), Postives = 116/218 (53.21%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH TVSK+R LL+ S+L SI+VGR++ EI ACA RK G
Sbjct: 172 PAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGA 231
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL------------HGVSKGRSS 143
LFFP+LIT LC A+ +EE L + G ID+ ++AR+ +S
Sbjct: 232 LFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATAS 291
Query: 144 KNMVCG--------VEEILRQQR----KMMRRMEHSENQQKAYWEYAHHRDSAMEKTFEY 203
N G +E+ L QQ MM ++H+ QQ+ +W Y+ RD+A++K +
Sbjct: 292 SNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQN 351
Query: 204 GFEELPQPFPQFPASLFDPWYPSPSLSGNDDDVDADQE 218
F +P P FPA +P L D + +A+ +
Sbjct: 352 NF---TRPMPTFPA------FPQEILKDLDYEYEAESD 380
BLAST of Lag0010640 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21
Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH VSK+R LL+ S+L SI+VGR++ EI ACA +K G
Sbjct: 102 PAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGA 161
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL------HGVSKGRSSKNMVCG 143
LFFP+LIT LC A V+E++ L + G ID+ ++AR+ + SS+
Sbjct: 162 LFFPSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAAS 221
Query: 144 VE----EILRQQRKMMRRM---EHSENQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQ 203
++L+Q + + +R+ EH+ QQ+ +W Y+ RD+A++K + F +P P
Sbjct: 222 SSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNF---TRPIPT 281
Query: 204 FPASLFDPWYPSPSLSGNDDDVDADQE 218
FPA +P L D + +A+ +
Sbjct: 282 FPA------FPQEILQDLDYEYEAESD 297
BLAST of Lag0010640 vs. ExPASy TrEMBL
Match:
A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 9.0e-18
Identity = 61/145 (42.07%), Postives = 86/145 (59.31%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH TVSKER LL++S+L SI+VG+++ +EI A A RK G
Sbjct: 79 PPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHREICAYAARKSGA 138
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL---------HGVSKGRSSKNM 143
LFFP+LIT +C A+ +EE L + G ID+ ++AR+ H S R +
Sbjct: 139 LFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSHRPSSSRPAAAS 198
Query: 144 VCGVEEILRQQRKMMRRMEHSENQQ 160
E L+Q + + +R+ E QQ
Sbjct: 199 SSSTSETLQQLKSLEQRISQQEVQQ 223
BLAST of Lag0010640 vs. ExPASy TrEMBL
Match:
A0A2P5CXU3 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113580 PE=4 SV=1)
HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 0
Query: 24 PEANVWHTFARSRLLPTTHDTTVSKERPLLVFSILKILSIDVGRLLAKEILACAKRKVGR 83
P A VW+ F +SRLLPTTH VSKE LL++S+L SI+VGR++ +EI ACA RK G
Sbjct: 10 PPAKVWYHFLKSRLLPTTHGKIVSKECVLLLYSMLTGKSINVGRIIHREICACAARKPGA 69
Query: 84 LFFPNLITALCLKAQVQVDEDEEILMDKGIIDSASIARL 123
LFFP+LIT +C A+ +EE L + G ID+ ++AR+
Sbjct: 70 LFFPSLITRMCRNARAPYLVNEEKLHNTGEIDAIAVARI 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON59596.1 | 5.1e-23 | 36.97 | hypothetical protein PanWU01x14_158080 [Parasponia andersonii] | [more] |
PON46472.1 | 5.6e-22 | 37.16 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
PON78020.1 | 2.8e-21 | 36.71 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
PON62892.1 | 1.9e-17 | 42.07 | hypothetical protein PanWU01x14_135680 [Parasponia andersonii] | [more] |
PON65869.1 | 2.1e-16 | 51.52 | hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5CEY2 | 2.4e-23 | 36.97 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... | [more] |
A0A2P5BCG4 | 2.7e-22 | 37.16 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5DXM3 | 1.3e-21 | 36.71 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
A0A2P5CPE8 | 9.0e-18 | 42.07 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... | [more] |
A0A2P5CXU3 | 1.0e-16 | 51.52 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
Match Name | E-value | Identity | Description | |