Lag0010544 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010544
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Integrase catalytic domain-containing protein
Location	chr1: 964299 .. 974912 (-)
RNA-Seq Expression	Lag0010544
Synteny	Lag0010544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGGCGGGATCCATTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGTAGGAGTGTATTCCTTCTTGCACGACTATGTCCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACTGAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCCGAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCAAGTTACCTAGGTCATCAGATGAAATAGTCAGTCTCGTCAGTAAACGGTGTTATAAAGCGAGAGCGACTTATTTCTCGGTCCTGGTCTTATGCAAACTCATTGCATAGGACACCCCCACTCGCATGTCTCTACATGGACGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGTCGCGTCTCATAGTGTCTCCAGAATAAGGTACCCAACCCTATTCCTATACTATAGACCGTTTTGGCTATTACTCAAGCTTGATCCACTTTTATGTCTCTACATAAAGCTCAAGTGTTCATCCTATAGCCATGGATCTTAGTTTATTGGATTTGGGTTATATATGTGCAATTTAATTTATTTAGTAATGACTTTTACTGAATCAATCTCGATAACACCTTTATCGAATAAGTATATAATTCGTTTAACATTCATTATCTACGAGTTTTAGGGCACCAATCCCAACAATTACATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAGTAATTTGAGGCAACTAAGTAATAATAGTAAATTGAAAATGTTCAATTTATTAAGGGAAACAAATATAATATATATTGATATATTATTACGAGAGAAATTAATATTTGAAAAGTTCAAATATAAATTTATGGAAGTTTGAAAGAGTTCAAATAATGAATTAATTAATTTAAGGCCTAAAATGTGTTTGGGCAAAATTAATTAATTCTAGGCCGGGAATTAAATATGTGATATTTAATTGGTGGTTAATTAATTAAAGAATTCATTAACCGGGAATTAATCAATTATGGAAATAATTAATCACTTAAGGAAGTGATTAATCATTTATGGAAATGATCTAATCACTTATGGAAGTAATTAGTCATTTGTGGAAAAGATTAATCAATTATGGAATTGATTGATCATGATTGATTAATTAAGGAATAAGATTGAATCAATTATGGAAAAGATTGATTTAATTGAATATTTTATTCATGGTCTCTCTTCTATAAATAGAACACTAGACCTAATTGGTCATGACACTTGACACTCTTGAAAGACAAGACCTAGAATTCTCTCTAGCCTCCCTCTTAGAGAAAGACTCCCACAAGTCTTTTGCCTCCTAGACTTAGAGACATACCGGTGTAACCTCTGTGGTGATTGTGTCAATCAAAGAAGAAATTTCCAGCGAAGAAAAACAAAGGCGGCTGCTGCGTTTTCGTTCGTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTTCAACGAAGGTTTGTAACGGTTCTTCCTCTTTTCTTTAGAAAAGTATTAAAAATAAATTTAGATTTATTTTAGCATGTTTAAACCAATTTTACAGCGACTTTAAAGGTTGTTTAAAGTTTTGTTTGAGTTATCGTAACGGTATTTTAATGTTAATTAATATACGGCGTAAGGTCCAATCGATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCAGTTTGTTGGGTTTAATGTCCTATAAACTCGTAGTTTTGTAAATCATTAAACATATTCTATTTCCAATAAAGACGTTATTGAGGTTATTCAGTAAAAGATGTTATTGAATATGTGAATTGCAAATGATTAACCTAAATTCAATAAACTAAGATCCTTGGCTATAAAATGAATACTCGAACTATATGTAGGGACATATCATAGGATCAAGTTCAAGTTTATAGTTAAAATAGTCTATAGTATAAGGATATGGTTGGGTGCCTTATCCTAAAGACACTATGGACGCGACCCACTTTGTATTAAGTACAAACGATGAGATCCTAAATCATTCATGTGGTGACATGCGAGTGGGGGCGTCCTATGCAATGAGATTGCATAAGACTGGACCACAAAATAAGTCACTTTCTCTTTATAACACCGTTTACTGAAGAAACTGACTATTTCTCATAGATGACCTAGGTAACTCGTTCTTAATCCTGAGCTATCTATGAACTTCTGTTTATGCGAGATTATCCTTTGATCTGCATGGGTGAGAGTGGCCAGCATCGTCGACTCAACAAGCCTACCATTTTGGGGATAAGATCGAATAGATAGCTGGGGACATAGTTTTGCAAGACGGAATTCACTCTTATCCATTTCAGGGATAGCAGAGAGGTTGTTCCCTTAAGTACTAACTCCAGGACTTGAACAAGGGGCCCCACCCTCTCATTGGATCGAGAGGGACTTAGGTTTGATGGTTGGACCACAAACCAATTGTTCATTAGAGGATTAGTGGAACTTAAGGAGCAAGAAGTACTATAGGGGTGAAACGGTTATTTGACCTAACTATAGCTACGAACAACTTGTGAAGGAACGACTTACTGATCATGGTTAAATCAAGTGGACGGAAATATATCTATAGTGAGGGGAGTGCAACTATCGGGCTATAGTGGAGTGTTCCGGTAGTTAACGAATGTTGGCTAGCTTAGATAATGAGATTAGTCGGTTAGCCTCGAATCGTTGGAACCCATGATCTATAGTTCCATTAGGTCCCTCTACTAGCTCATATTGTATTAATGCTTAGATCATAATGATAGGAATCTTTGAATCGTTAAAAAACGGGAAATAGGGCTTTATCGTAAAAATGTGTTTGACACAAAATTTTAATTATGAATTAAATAAGGAATTGAGAGATAAAGTATTTAAAAGTGTTTTAAATACCATGTATATGTATTAGGAATCATATACTATTAATGGCACAAGGTAAGAATGACTAATTAGATTAATCATGATAAATTACTTGGAAATGTCCCAATTAATAACCTAGAAATCAAATTCAATTTCAAATTGAATTAGGGAAAATTGCAAGCTGAAAATTCAAGAATGAAGATTCAATTAAGTGGATTTAGTGGCATTCCCACTCTTGCATGTTGATGCATAGTGGAAAACAACACAACCATGCACTAGTTGCATGTGTTGTGAATTAAACACCTAGAATCCACTTTGAGTTGCATTTTCACCATGTGTCTAGTGTCATGAAGCTTGTCTTTGCATGGAAGAGGTCTTTATAAGAAACTTGAATCATATTCAAAAAAGGAGAGAGCAATTTACCTACTGTTATGCTGCTGGTTTTACCTCTCAAACACACACACTTCCATAGATCTCTCAAGAGCTTGTTCCTTCAAGCATTCTCTTCCCTTTCCTTATCACTATAGACTCCCACAATTCATTCTAGGCAAGGAGAATAGTAGAGAAGACACTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCTCAAGTGAGCTACCAAGAGGTTGGTACTCCTTTACTTTCTGTTCTGTTTTTCTAGAACGTGCATGCTTTAGGTTCAGAATTAAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAATTTCTCCAAGAAATTGGCTTGCGTGCCCAAATCATCTCGTGCCAGCTTGCACATCAGTCACATGTCAGAGCGAGCATCCTCTTGGCTGTCATTTGTACGATTCACACACGGGGATCTGCGCTTGCGTTGAAAATAATTTGGGCTAGGAAACAACTAAAGAAGTTATGCGTTAGCGAGCAAAAATATATGATTTCCTGTTCGCATACAAGAATATTCATTTAAAGGTTAGTTATCACAATTCTCTACTATTCTGCGTTTACTCAGCGCATGTTAGATCTTTTCGGCGTTCTTTAGCTTAAATTTAGGATTATTTTTTTATTTTTTTTTATTTTTAAAGGATTATTTTGAGATTACTAGCATGTCTATGTTAAACATACCATAATAAAGTAATAGTCAATTAATCATTTATTTTTCTCAAATAAAGTTTTTTTTTTCTTCTAATGAGTTATAACATCAATTATCATAAAAAAGATTGATGGTTTAATCTATCATCCTTGCATTGATTTTTTTTCTTTTTTTAAAAGTTATGGTGAATGTTCATCTAATCAATAAAAATAAAAATAAAAATCTTATATATACCTACACCTAGCGTTTGTAGTCCAACGGTTAGGATAATTGCCTTCCAAGCAATAGACCCGGGTTCGACTCCCGGCAAACGCACATTTATCAAATTAAGTATTTAAGTACAAGTATAGGTGTTGAAGTATTGAGAATATAAACTTTTTAGTAAATTGTCTCAAATATAAGCAATTGAGTAGCACATCTATGATAAACATTATAAAGGTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAACATTATAAAGGTAAGTTATTAAAATACTTTTAAATGTATTAATACATTTTTTGAATTTGACCAACATCAATTATCATTTTAAATGTTTGATTAAGCAATAAAATTAATTTTAGCATAAACTTAGCGTTTGTAGTCCAACGGTTAGGATAATTGCCTTCCAAGCAATATAGACCCGGGTTCGACTCCCGGCGAACGCAGATTTATCAAATTACGTATTTAAGTATAAGTATTGAGAATATGAACTTTTTAGTAAATTTTGTCTCAAATATAAGCATTTGACTAGCACATCTATGATAAACATTATAAAGGTAAGTTTTTTTTTTTAAAACAAATTAAACATTATAAAGGTAAGTTATTAAAATACTTTTAAATGTATTAATACATTTTTCGAATTTGACCAACATCAATTATCATTTTAAATGTTTGATTAAGCAATAAAATTAATTTTAGCATAAACTTGGCGTTGTAGTCCAACGATTAGGATAATTGCCTTCCAAGCACAAGTCATGATTGAACCAAACTGAAGTCAGCCGTTTGAACTTTACAGTTACAGAAAAAACTACTTGTAGTAGTTTACGGGTTTGACAAGTTTAGATTCTACTTAGTGGGAACTAAAGTTGTAGTTCATACTGGTCATTCAACCCTTAAACATTTGTTATCCAAGAAAGATGTTAAACCCCGTCTCATTCGCTGGATTTTACTTTTGTAAGAATTTTATATTGAGATCCATGACAGGAAATGGACTAAAAATCAAGTTGCAAATCATTTGTCATGACTTGGGTAAGAGGCGCAAGTGGAGAAGAGGCTGGACATTCGAGAGTCGTTTGCAGATGAACAGATATTGGCGGTGAAAGCAATTGAGATTCCATGGTTTTCAGACTATGTGAACTACCTAGTCAATGGACTAAAACCTCCGGAAGCCACAACTCAACAACTGAAGAAGTTTTTAAAAGATGTGAAGGAGTATTATTCGGATGAACCGTATTTATACAAGCTTGGACCAGATCAGATACTCAGACGATGTGTAACAGAGGAGGAAGTACCATTCATTTTGGAAGCTTGTCATTCAATTCCATTTGGAGAGCACTTCGCAGGTCTAAAAACTGCAACAAAAGTCCTCCAATTAGGATACTTTTGGCCAAGCCTTTTCAGAGATGCACATTTGTTTGCAAGGAACGGTAACCAATGCCAAAAAACAGGGAATTTGACAGTTAGGAGTGAAATGCCACTGAACTTCATACTTGAAGTAGAAATCTTTGATGTATGGGGTATAGATTTCATGGGCCCATTCCCTCTGTCCTTTGGAAATATCTATATTCTGCTTGCAGTTATTGATTATGTATCGAAATGGATCGAAGCCATAACCACATCATCCAATGATGCGAAGGTAGTAAAGAAATTCTTAATGAATACGATCTTTACAAGGTACGGGACTCCTAGATTTATCATAAGTGATGAAGGTACACATTTTTTAAACAAGATGATAGCCATTATGTTTTCCAAATATAACATCAAGCATAGAGTTGCAACTGATTACCATCCCCAAACGAATGGGCAAGTAGAGCTCTCTAACCGAGAGATAAAGTCAATTTTTGAAAAAACAATAGACCCTTCTCGGAAGGATTGGTCTCTACGTCTTGAGGAGGCATTATGGACACATAGAAAAACATACAAAGCACCCTTAGGAATGTCTCTATACCAGATTATATTTGGAAATGCTTGTCATCTACCTCTAGAGCTGGAACACAAAGCTTATTAGGCGTTGAAGAAGTTCAACTTCAATCTAGACAAAGTTGGAGTTAAAAGAAGATTACAGTTAAATGAGTTGGAAGAACTCCGTCATTTCTCCTACGAAAATGCGAAGCTATATAAGGAGAAAGTCAAGAGATGACATGATCGGAGGATACATCCAAAGAAGTTTCATAAAGGCCAACAAGTGTTGCTTTTCAATTCAAGACTGAAATTGTTCCTAGGAAAGTTGAAGTCGAGATGGTCAGGACCGTTCAAGATTGTGAGAATTTTTTTTATTATGGAACTGTAGAATTAATGGATCACCGAGGTACACACTTCAAGGTAAATGGTCAAAGGACTAAACCATATTGGGGAAAGAGTTTTCAGGCTGAGGATGCCCTTGTGTCGGTAATAGATCTGGTATGATTCCTATGAACTTTTTTTGTATTGTGTGGATTAAGATGATTTGAAAAAAAAAACAAAAAAAAAAAAAGAACAAAAGAACAAAATATAATGGGCAAGAGTAAACTTCGTCTAAGAAAATTCTGTCGAGGAAAAGGTACTTAAGATGACCGTAGGGAACACCTTTTCTTGGGGATTTACCTGAGAACTGAAATGGCTAGGTTATTTTGAATTTTCTCAAGGATAATGAAGTTTGAGTATATGAACCTTTTAAAAAGTTTGTTATTGTTTTAGCAGTAAAGAAAGAAAATCAGAAGAAGCGAAAAAACTAAAAGGCAGTGAACTGGGAGAATTGCGACCGGATTTTCCCTAGTGCATTAGGTAAAGGTGTTCATATAACACATGCGGAAGCAATTGGAGATCGGAGGCACTTAACTACATCAATTTTAGATCTAAAGCATGTTTGTTCTAAACATCTAGAAACATAGAGCAGAAAAACACCAACCTTTATGTAGCTCAATGGATGGACCTCTGTGGGTTCTTTTTCTTCTCCAATCAACTCAGGACAACCGCTAGAGTCTTCCCCGCTATTATCCGGGCCAAGAATGACTTGTGGGAGTCTATAGAGATAGGGATTGGAAAGGGAATTCTTGAAGTGTCAAGCTCTAAAGAGTTTCTTTTGTGTGAGTGTATGTGAGTGATCAATTCAGCAACATAACAATATGCAAAATTGATCTCTTCCCTTCTCCATCTGATTATCCTCTACTTATAGAGGATTTCCACACATTTGCATCATAAACTCACAATATGAAGGACACATGGTGAGGAGAAGTTATCTAGTGGATTCTAGGTGGCCTTTTGAGATGACATAAAGTGTGTGGTGTAATTGCACTACTTTGATCCATGCAAGAGTGGATTTTCATCGATCTCCACTATCTCCATCTATGCAAGATTGAATTTCTCTAAGTTGGATTTGAATTTCAATTTCAATTCCTAATTTTCTTTTCATTTCACCAATTGATTTGAGTAATTTCAATCAATCTCATGATATTAATAAAATTAATTCATGTTGCCTAATTCAATCCACTAATCTTGAATTTTCATAAATTCCAAGATTGATTTCTTTGTTTTTTATTTTAATTAAAAATAATTCATAATCATTTTTATATTAAAATTACAATTAATTAAACAATTTAATGAATTATGAAATATTTACTTAATATCATATATTAAATTAACATTTTTGCACCAAACATGAATCCTTATTCATGTATATTGTATTTAATTCATATTTAAATACTTTTCACTCTCAATTAATAATTTAATCCATAATTAAATTATTGTGTCAATAACATCATATATATAATTGACACTAATTCCCTTTCCCGATTTTGAACGATTGAAACTTTCCTATCTTATTATTCTAAGCTTTATTCCGATGTAAGCTAGTAGGGGGACCTAATGGGCCTATAGATCATGGGCTCCAACGATTCGAGGTTAATCGACTAATCTTATTAACCAAGCTAACCAACATTTGTTAACTACCAGGACACTCCACTATAACCTAGTAGTTGCACTCCCCTCACCGTAGATATGTTTCCATCCACTTGATATAACCATGTTTAGTAAGTCGATCCTTCACAGGTTATTTGTAGCTATAGCCGAGTCAAATGTTTGTTTTACCTCTATAGTACTTCTTGTTCCTTAAGTTCTACTGATCTTCTAATGAACAATTGGTTTGTGGTCCAACCTTCAACCTGAGTCATTCTCAATGAGAGGGTGGGACCCCTTGTTCAAGTTATGGAGTCAGTACTTAAGGGAACAACCTCTCTACTATCCCTGAAATGGGTAGGAGCAAATTTTGTCTTGCAAAACTATGTCCCTAGCTATTTATTTGGTCTTCCCCTCAAAATGGTAGGCTTTTTGAGTCGACGATGTCTTGCCACTCTCACCCATGCAGATCAAAGGATAATCCCAAGTAAATAGGAGTTCATAGTCGACTCAGGATTAAGATCGAGTTACCTAGGTCATCCTATGAAATAGTCAGTTTCTATAGTAAACGACATTATAAAGTGAAAGTGACTTATTTCGCGGTTCAATCTTATGCAAATTCATTGCATAGGATGCCCCCACTCACATGTCTCTACATGAACGATTCAGGATCTCATCGTTTGTACTTAATACAAAGTGGGCCACGTCCATAGTGTCCCCAGGATAAGGTACCCAACCCTATTGTTGCCTTCTAGAGTGGGTTAAAAAATATGATAGCAATGATCTCTAGAATACTATGCAAGTGCACGTAGTCTGAAGCAAGTGTAAGTAATTTATCGTATCCACGAGGTTTTGAATAGCTTTCACTTTATCTATTCTATGTAGCTTTTTAGTGATTTCAAGATTGTTAAAATGATTGAGTTTTGAAATAATGCTGAAGCAAAAGAAATAACAGAGCAGAATGCAAACGGATAAAGAAGACAGTTTGGAAACAGGTGTTTGTTAAGATTTCTGTAATTTTTAAAAAGATGCTTTTGCAATTAGATTGATCAGGCAAACTCTTGCAGTCTTATCAACAGGATCCTCCTAGGCAACTGGTTATCCCTAACTCAGTCACTAGCGTTCACCAACACATAATGGTCTAGTGTGATTAAGAGCCACACACCTCTTAAATCATCTCTGAAACTAAGAGATGGTATTCATACCGACTGGCCAGGCGGGCACAAAATAAGAATAAACACAACAAGTAATCAAGATGCTCAAAATCAATATCAATTGCTAGATCATAAAGTACGACAATTACATAGTCCTAACCAACACCTAAGTTAATTTAGTTCATGGAATGAAAAGTAACACACGTTACAATCTGTTTACGTGCACCCATAACTACAAGACTTTTACTGGAAATATTAATTTCCCTAGCAGAAATCGGTAGCTAATGGTCTGCTTGAAGTCTCCAATCGTTCCTCCTCTATTCGACTTTCAAAGATGGAAAATGAGTCTTCAACTCGAAATCAATTGACTTGAGACGACTTCTTCCTTTTATAGAGTGTAGTCAACCCTGATTAGGTCAAATAATACACGTGGAACACTCTCCCAACTTCTTAGATCTGAGATTGCTTCTAAAACCACCACCTCATTAATGAATCACGTACGACTCACGAGGCAAGTTTTGCTCTTAACTTTGCTGGATCATAGAATTTGCTCCCTCAAGTTGCTCAGCATTAATTTCTCTGCAAAATTACTTCCATAGCATCAATTCTTCTAAATAGGATAAATCATATAATATTCATCTAATAATACACCTATTTGACACAAATGACACACAAATCACTATAGAAATAAGGCCTAAATAACTCCCTTTTCGAGAGTTATCACTTATCCTTATACTATAGACTGTTTTGGCTATATACTTGAATTTGATCCAATTTTATGTCTCTACATATAGTTCGAGTATTCATACTATAGCCAAGGACCTTAGTTTATTGGATTTAGGTTAAATATTGTGCAACTCACATATTCAATAACATCTTTATTGAATAACCTCAACAACTTTATTGAAAATAGAATATGTTTAATGTTTTACAAAACTATGAGTTTTAGGACATTAAACCCAACAACTCCCACTTGGACTAAAACTCTGGTGGGGTAGTTGAGTGTGAGAGATAATATACATATAGACAGTAAACTAAGGCATCAACCATACCATTATGACATTTCTCCCACTTGCCCTAGTCTATCAAAGCTCATATTCCTAGATTTTCTAGGCGACTCTAAAAAACTTTAGCCATGAGGGGTTTTGTAAACGAATCTGCCATGTTGTGCTCTGAAGCTATCTACGTGACGATTACATCTCCTCGTTGCACGATCTCCCTGATGAGATGATATTTGCACTCAATGTGCTTTCCACGCTTGTGACTTCGAGGTTCCTTAGAGTTTGCAACTGCTCCATTGTTATCACAATAGAGGGTGAGAGGGAATTGCATATCTGGAACGACTTCCAACTCTGTTAG

mRNA sequence

ATGAGAGGGCGGGATCCATTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGGCACCAATCCCAACAATTACATCGTTGGAGCTTCTGATCTGCAGAAGAAATTTCCAGCGAAGAAAAACAAAGGCGGCTGCTGCGTTTTCGTTCGTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTTCAACGAAGGCAAGGAGAATAGTAGAGAAGACACTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCTCAAGTGAGCTACCAAGAGAGGCGCAAGTGGAGAAGAGGCTGGACATTCGAGAGTCGTTTGCAGATGAACAGATATTGGCGGTGAAAGCAATTGAGATTCCATGGTTTTCAGACTATGTGAACTACCTAGTCAATGGACTAAAACCTCCGGAAGCCACAACTCAACAACTGAAGAAGTTTTTAAAAGATGTGAAGGAGTATTATTCGGATGAACCGTATTTATACAAGCTTGGACCAGATCAGATACTCAGACGATGTGTAACAGAGGAGGAAGTACCATTCATTTTGGAAGCTTGTCATTCAATTCCATTTGGAGAGCACTTCGCAGGTCTAAAAACTGCAACAAAAGTCCTCCAATTAGGATACTTTTGGCCAAGCCTTTTCAGAGATGCACATTTGTTTGCAAGGAACGGTAACCAATGCCAAAAAACAGGGAATTTGACAGTTAGGAGTGAAATGCCACTGAACTTCATACTTGAAGTAGAAATCTTTGATGTATGGGGTATAGATTTCATGGGCCCATTCCCTCTGTCCTTTGGAAATATCTATATTCTGCTTGCAGTTATTGATTATGTATCGAAATGGATCGAAGCCATAACCACATCATCCAATGATGCGAAGGTAGTAAAGAAATTCTTAATGAATACGATCTTTACAAGGACAACCGCTAGAGTCTTCCCCGCTATTATCCGGGCCAAGAATGACTTGTGGGAGTCTATAGAGATAGGGATTGGAAAGGGAATTCTTGAAGTGTCAAGCTCTAAAGAGTTTCTTTTGTGTGAGTGTATCTATCTACGTGACGATTACATCTCCTCGTTGCACGATCTCCCTGATGAGATGATATTTGCACTCAATGTGCTTTCCACGCTTGTGACTTCGAGGTTCCTTAGAGTTTGCAACTGCTCCATTGTTATCACAATAGAGGGTGAGAGGGAATTGCATATCTGGAACGACTTCCAACTCTGTTAG

Coding sequence (CDS)

ATGAGAGGGCGGGATCCATTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGGCACCAATCCCAACAATTACATCGTTGGAGCTTCTGATCTGCAGAAGAAATTTCCAGCGAAGAAAAACAAAGGCGGCTGCTGCGTTTTCGTTCGTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTTCAACGAAGGCAAGGAGAATAGTAGAGAAGACACTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCTCAAGTGAGCTACCAAGAGAGGCGCAAGTGGAGAAGAGGCTGGACATTCGAGAGTCGTTTGCAGATGAACAGATATTGGCGGTGAAAGCAATTGAGATTCCATGGTTTTCAGACTATGTGAACTACCTAGTCAATGGACTAAAACCTCCGGAAGCCACAACTCAACAACTGAAGAAGTTTTTAAAAGATGTGAAGGAGTATTATTCGGATGAACCGTATTTATACAAGCTTGGACCAGATCAGATACTCAGACGATGTGTAACAGAGGAGGAAGTACCATTCATTTTGGAAGCTTGTCATTCAATTCCATTTGGAGAGCACTTCGCAGGTCTAAAAACTGCAACAAAAGTCCTCCAATTAGGATACTTTTGGCCAAGCCTTTTCAGAGATGCACATTTGTTTGCAAGGAACGGTAACCAATGCCAAAAAACAGGGAATTTGACAGTTAGGAGTGAAATGCCACTGAACTTCATACTTGAAGTAGAAATCTTTGATGTATGGGGTATAGATTTCATGGGCCCATTCCCTCTGTCCTTTGGAAATATCTATATTCTGCTTGCAGTTATTGATTATGTATCGAAATGGATCGAAGCCATAACCACATCATCCAATGATGCGAAGGTAGTAAAGAAATTCTTAATGAATACGATCTTTACAAGGACAACCGCTAGAGTCTTCCCCGCTATTATCCGGGCCAAGAATGACTTGTGGGAGTCTATAGAGATAGGGATTGGAAAGGGAATTCTTGAAGTGTCAAGCTCTAAAGAGTTTCTTTTGTGTGAGTGTATCTATCTACGTGACGATTACATCTCCTCGTTGCACGATCTCCCTGATGAGATGATATTTGCACTCAATGTGCTTTCCACGCTTGTGACTTCGAGGTTCCTTAGAGTTTGCAACTGCTCCATTGTTATCACAATAGAGGGTGAGAGGGAATTGCATATCTGGAACGACTTCCAACTCTGTTAG

Protein sequence

MRGRDPFVQAPESALKGTTSLLSLIRGTNPNNYIVGASDLQKKFPAKKNKGGCCVFVRGASLAKNGQVFNEGKENSREDTKGCPREVGEGKHHKEFLSSELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFLKDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGNIYILLAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTRTTARVFPAIIRAKNDLWESIEIGIGKGILEVSSSKEFLLCECIYLRDDYISSLHDLPDEMIFALNVLSTLVTSRFLRVCNCSIVITIEGERELHIWNDFQLC

Homology

[Close]

BLAST of Lag0010544 vs. NCBI nr
Match: PIM97577.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-66
Identity = 124/219 (56.62%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A+ ++   I ++F DEQ+LA+ A ++PW++D VNYL  G+ P + + QQ KKFL
Sbjct: 1117 SRLESPAKTDEPNLINDNFPDEQLLAIVASDVPWYADIVNYLTCGIIPFDLSAQQKKKFL 1176

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+P+L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K+LQ G
Sbjct: 1177 FDTRRYFWDDPFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAKILQSG 1236

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1237 FFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILEVELFDVWGIDFMGPFIPSFGN 1296

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTR 318
            +YIL+AV DYVSKW+EA    +ND+KVV  F+   IFTR
Sbjct: 1297 MYILVAV-DYVSKWVEAAAVPNNDSKVVVNFIKKNIFTR 1334

[Close]

BLAST of Lag0010544 vs. NCBI nr
Match: PIN22518.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])

HSP 1 Score: 261.9 bits (668), Expect = 9.3e-66
Identity = 122/213 (57.28%), Postives = 161/213 (75.59%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A+ ++   I ++F DEQ+LA+ A E+PW++D VNYL  G+ P + +TQQ KKFL
Sbjct: 1099 SRLESPAKTDESNLINDNFPDEQLLAIVASEVPWYADIVNYLTCGIIPFDLSTQQKKKFL 1158

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+P+L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K+LQ G
Sbjct: 1159 FDTRRYFWDDPFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAKILQSG 1218

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1219 FFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILEVELFDVWGIDFMGPFIPSFGN 1278

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLM 312
            +YIL+AV DYVSKW+EA    SND+K+V+  +M
Sbjct: 1279 MYILVAV-DYVSKWVEAAAVPSNDSKIVQSLVM 1310

[Close]

BLAST of Lag0010544 vs. NCBI nr
Match: PIN26668.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])

HSP 1 Score: 259.6 bits (662), Expect = 4.6e-65
Identity = 122/224 (54.46%), Postives = 164/224 (73.21%), Query Frame = 0


Query: 94   KEFLSSELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQ 153
            K+     L   A+ ++   I ++F DEQ+LA+ A ++PW+SD VNYL  G+ P + + QQ
Sbjct: 1052 KKDAKPRLESPAKTDESNLINDNFPDEQLLAIVASDVPWYSDIVNYLTCGIIPFDLSAQQ 1111

Query: 154  LKKFLKDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATK 213
             KKFL D + Y+ D+ +L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K
Sbjct: 1112 KKKFLFDTRRYFWDDLFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAK 1171

Query: 214  VLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFP 273
            +LQ G+FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN IL+VE+FDVWGIDF+GPF 
Sbjct: 1172 ILQSGFFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILKVELFDVWGIDFIGPFV 1231

Query: 274  LSFGNIYILLAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTR 318
             SFGN+YIL+AV DYVSKW+EA+   +ND+KVV  F+   IFTR
Sbjct: 1232 PSFGNMYILVAV-DYVSKWVEAVAVPNNDSKVVVNFIKKNIFTR 1274

[Close]

BLAST of Lag0010544 vs. NCBI nr
Match: PIN22487.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])

HSP 1 Score: 259.6 bits (662), Expect = 4.6e-65
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A+ ++   I ++F DEQ+LA+ A E+PW++D VNYL  G+ P + +TQQ KKFL
Sbjct: 1115 SRLESPAKTDESNLINDNFPDEQLLAIVASEVPWYADIVNYLTCGIIPFDLSTQQKKKFL 1174

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+P+L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K+LQ G
Sbjct: 1175 FDTRRYFWDDPFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAKILQSG 1234

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1235 FFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILEVELFDVWGIDFMGPFIPSFGN 1294

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLM 312
            +YIL+AV DYVSKW+EA    +ND+KVV+   M
Sbjct: 1295 MYILVAV-DYVSKWVEAAAVPNNDSKVVQSSAM 1326

[Close]

BLAST of Lag0010544 vs. NCBI nr
Match: PIN03721.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])

HSP 1 Score: 258.5 bits (659), Expect = 1.0e-64
Identity = 122/219 (55.71%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A++++   I ++F+DEQ+LA+ A ++PW++D VNYL  G+ P +  TQQ KKFL
Sbjct: 909  SRLESPAKIDEPNLINDNFSDEQLLAIVASDVPWYADIVNYLTCGIIPFDLNTQQKKKFL 968

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+ +L+K GPD ILRRCV E E+  +LE CH+ P+G HF   +TATK+LQ G
Sbjct: 969  LDTRRYFWDDLFLFKQGPDNILRRCVPEVEMNNVLEQCHASPYGGHFQEDRTATKILQSG 1028

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +F P+LF+DAHLF  N ++CQ+TGN++ R EM LN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1029 FFLPNLFKDAHLFVANCDRCQRTGNISRRHEMLLNTILEVELFDVWGIDFMGPFVPSFGN 1088

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTR 318
            +YIL AV DYVSKW+EA+   +ND+KVV  F+   IFTR
Sbjct: 1089 MYILFAV-DYVSKWVEAVAVPNNDSKVVVNFIKKNIFTR 1126

[Close]

BLAST of Lag0010544 vs. ExPASy Swiss-Prot
Match: P92516 (Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana OX=3702 GN=AtMg00750 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-14
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 214 VLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFM 270
           VLQ G++WP+ F+DAH F  + + CQ+ GN T R+EMP +FILEVE+FDVWGI FM
Sbjct: 35  VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90

[Close]

BLAST of Lag0010544 vs. ExPASy Swiss-Prot
Match: O93209 (Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 7.3e-05
Identity = 27/105 (25.71%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 206 AGLKTATKVLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWG 265
           AG +     +Q  Y+WP + +D   F    N C+    L ++   P   +   + FD + 
Sbjct: 819 AGREAVLLKIQENYWWPKMKKDISSFLSTCNVCKMVNPLNLKPISPQAIVHPTKPFDKFY 878

Query: 266 IDFMGPFPLSFGNIYILLAVIDYVSKWIEAITTSSNDAKVVKKFL 311
           +D++GP P S G +++L+ V+D  + +     T +  +K   K L
Sbjct: 879 MDYIGPLPPSEGYVHVLV-VVDAATGFTWLYPTKAQTSKATIKVL 922

[Close]

BLAST of Lag0010544 vs. ExPASy Swiss-Prot
Match: P27401 (Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) OX=11644 GN=pol PE=3 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-04
Identity = 40/149 (26.85%), Postives = 68/149 (45.64%), Query Frame = 0


Query: 170 YLYKLGPDQIL-------RRCVTEEEVPFILEACHSIPF-GEHFAGLKTATKVLQLGYFW 229
           Y Y+L   Q++       R    + + P I+   H+I   G     LK ++K     Y+W
Sbjct: 778 YQYQLENGQVMVTRPNGKRIIPPKSDRPQIILQAHNIAHTGRDSTFLKVSSK-----YWW 837

Query: 230 PSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGNIYI 289
           P+L +D     R   QC  T   T+ +   L     V+ FD + ID++GP P S G +++
Sbjct: 838 PNLRKDVVKVIRQCKQCLVTNAATLAAPPILRPERPVKPFDKFFIDYIGPLPPSNGYLHV 897

Query: 290 LLAVIDYVSKWIEAITTSSNDAKVVKKFL 311
           L+ V+D ++ ++    T +       K L
Sbjct: 898 LV-VVDSMTGFVWLYPTKAPSTSATVKAL 920

[Close]

BLAST of Lag0010544 vs. ExPASy Swiss-Prot
Match: P23074 (Pro-Pol polyprotein OS=Simian foamy virus type 1 OX=338478 GN=pol PE=1 SV=3)

HSP 1 Score: 47.8 bits (112), Expect = 3.6e-04
Identity = 33/120 (27.50%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 192 ILEACHSIPF-GEHFAGLKTATKVLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEM 251
           I+   H+I   G     LK ++K     Y+WP+L +D     R   QC  T    + S  
Sbjct: 807 IISTAHNIAHTGRDATFLKVSSK-----YWWPNLRKDVVKSIRQCKQCLVTNATNLTSPP 866

Query: 252 PLNFILEVEIFDVWGIDFMGPFPLSFGNIYILLAVIDYVSKWIEAITTSSNDAKVVKKFL 311
            L  +  ++ FD + ID++GP P S G +++L+ V+D ++ ++    T +       K L
Sbjct: 867 ILRPVKPLKPFDKFYIDYIGPLPPSNGYLHVLV-VVDSMTGFVWLYPTKAPSTSATVKAL 920

[Close]

BLAST of Lag0010544 vs. ExPASy TrEMBL
Match: A0A803R2M6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 125/215 (58.14%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 104 EAQVEKRLDIRESFADEQILAVK-AIEIPWFSDYVNYLVNGLKPPEATTQQLKKFLKDVK 163
           E+Q  K + I E F DEQ+ +V+ ++ +PW++DYVN+L   + PPE + QQLKKF  +VK
Sbjct: 121 ESQNTKEVQINEQFPDEQLFSVRESLMVPWYADYVNFLAANITPPELSRQQLKKFFSEVK 180

Query: 164 EYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLGYFWP 223
            YY +EP LYK   DQI+RRCV EEE+  IL  CH++P G HF+G +TA KVLQ G+FWP
Sbjct: 181 HYYWEEPILYKHCADQIIRRCVPEEEMYSILNHCHALPCGGHFSGTRTAAKVLQSGFFWP 240

Query: 224 SLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGNIYIL 283
           +LF+DA  F +  ++CQ+TGN++ R+EMPL  ILEVE+FDVWGIDFMGPFP SF N+YIL
Sbjct: 241 TLFKDASTFVKACDRCQRTGNISRRNEMPLTGILEVELFDVWGIDFMGPFPSSFSNLYIL 300

Query: 284 LAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTR 318
           LAV DYVSKW+EA  T +ND K V +FL   IFTR
Sbjct: 301 LAV-DYVSKWVEAAATPANDGKTVLRFLQKNIFTR 334

[Close]

BLAST of Lag0010544 vs. ExPASy TrEMBL
Match: A0A2G9FWY3 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29952 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 9.1e-67
Identity = 124/219 (56.62%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A+ ++   I ++F DEQ+LA+ A ++PW++D VNYL  G+ P + + QQ KKFL
Sbjct: 1117 SRLESPAKTDEPNLINDNFPDEQLLAIVASDVPWYADIVNYLTCGIIPFDLSAQQKKKFL 1176

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+P+L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K+LQ G
Sbjct: 1177 FDTRRYFWDDPFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAKILQSG 1236

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1237 FFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILEVELFDVWGIDFMGPFIPSFGN 1296

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTR 318
            +YIL+AV DYVSKW+EA    +ND+KVV  F+   IFTR
Sbjct: 1297 MYILVAV-DYVSKWVEAAAVPNNDSKVVVNFIKKNIFTR 1334

[Close]

BLAST of Lag0010544 vs. ExPASy TrEMBL
Match: A0A2G9HYD8 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04775 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.5e-66
Identity = 122/213 (57.28%), Postives = 161/213 (75.59%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A+ ++   I ++F DEQ+LA+ A E+PW++D VNYL  G+ P + +TQQ KKFL
Sbjct: 1099 SRLESPAKTDESNLINDNFPDEQLLAIVASEVPWYADIVNYLTCGIIPFDLSTQQKKKFL 1158

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+P+L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K+LQ G
Sbjct: 1159 FDTRRYFWDDPFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAKILQSG 1218

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1219 FFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILEVELFDVWGIDFMGPFIPSFGN 1278

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLM 312
            +YIL+AV DYVSKW+EA    SND+K+V+  +M
Sbjct: 1279 MYILVAV-DYVSKWVEAAAVPSNDSKIVQSLVM 1310

[Close]

BLAST of Lag0010544 vs. ExPASy TrEMBL
Match: A0A2G9IA86 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00577 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65
Identity = 122/224 (54.46%), Postives = 164/224 (73.21%), Query Frame = 0


Query: 94   KEFLSSELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQ 153
            K+     L   A+ ++   I ++F DEQ+LA+ A ++PW+SD VNYL  G+ P + + QQ
Sbjct: 1052 KKDAKPRLESPAKTDESNLINDNFPDEQLLAIVASDVPWYSDIVNYLTCGIIPFDLSAQQ 1111

Query: 154  LKKFLKDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATK 213
             KKFL D + Y+ D+ +L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K
Sbjct: 1112 KKKFLFDTRRYFWDDLFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAK 1171

Query: 214  VLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFP 273
            +LQ G+FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN IL+VE+FDVWGIDF+GPF 
Sbjct: 1172 ILQSGFFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILKVELFDVWGIDFIGPFV 1231

Query: 274  LSFGNIYILLAVIDYVSKWIEAITTSSNDAKVVKKFLMNTIFTR 318
             SFGN+YIL+AV DYVSKW+EA+   +ND+KVV  F+   IFTR
Sbjct: 1232 PSFGNMYILVAV-DYVSKWVEAVAVPNNDSKVVVNFIKKNIFTR 1274

[Close]

BLAST of Lag0010544 vs. ExPASy TrEMBL
Match: A0A2G9HYA0 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 0


Query: 99   SELPREAQVEKRLDIRESFADEQILAVKAIEIPWFSDYVNYLVNGLKPPEATTQQLKKFL 158
            S L   A+ ++   I ++F DEQ+LA+ A E+PW++D VNYL  G+ P + +TQQ KKFL
Sbjct: 1115 SRLESPAKTDESNLINDNFPDEQLLAIVASEVPWYADIVNYLTCGIIPFDLSTQQKKKFL 1174

Query: 159  KDVKEYYSDEPYLYKLGPDQILRRCVTEEEVPFILEACHSIPFGEHFAGLKTATKVLQLG 218
             D + Y+ D+P+L+K GPD ILRRCV E E+  ILE CH+ P+G HF G +TA K+LQ G
Sbjct: 1175 FDTRRYFWDDPFLFKQGPDNILRRCVPEIEMNDILEQCHASPYGGHFHGDRTAAKILQSG 1234

Query: 219  YFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFMGPFPLSFGN 278
            +FWP+LF+DAH F  N ++CQ+TGN++ R EMPLN ILEVE+FDVWGIDFMGPF  SFGN
Sbjct: 1235 FFWPNLFKDAHSFVANCDRCQRTGNISRRHEMPLNTILEVELFDVWGIDFMGPFIPSFGN 1294

Query: 279  IYILLAVIDYVSKWIEAITTSSNDAKVVKKFLM 312
            +YIL+AV DYVSKW+EA    +ND+KVV+   M
Sbjct: 1295 MYILVAV-DYVSKWVEAAAVPNNDSKVVQSSAM 1326

[Close]

BLAST of Lag0010544 vs. TAIR 10
Match: ATMG00750.1 (GAG/POL/ENV polyprotein )

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-15
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 214 VLQLGYFWPSLFRDAHLFARNGNQCQKTGNLTVRSEMPLNFILEVEIFDVWGIDFM 270
           VLQ G++WP+ F+DAH F  + + CQ+ GN T R+EMP +FILEVE+FDVWGI FM
Sbjct: 35  VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90

The following BLAST results are available for this feature:

BLAST of Lag0010544 vs. NCBI nr


Match Name	E-value	Identity	Description
PIM97577.1	1.9e-66	56.62	DNA-directed DNA polymerase [Handroanthus impetiginosus]	[more]
PIN22518.1	9.3e-66	57.28	DNA-directed DNA polymerase [Handroanthus impetiginosus]	[more]
PIN26668.1	4.6e-65	54.46	DNA-directed DNA polymerase [Handroanthus impetiginosus]	[more]
PIN22487.1	4.6e-65	57.28	DNA-directed DNA polymerase [Handroanthus impetiginosus]	[more]
PIN03721.1	1.0e-64	55.71	DNA-directed DNA polymerase [Handroanthus impetiginosus]	[more]

BLAST of Lag0010544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92516	2.9e-14	60.71	Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana OX=3702 ...	[more]
O93209	7.3e-05	25.71	Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1	[more]
P27401	1.2e-04	26.85	Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) OX=11644 GN=pol PE...	[more]
P23074	3.6e-04	27.50	Pro-Pol polyprotein OS=Simian foamy virus type 1 OX=338478 GN=pol PE=1 SV=3	[more]

BLAST of Lag0010544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803R2M6	1.1e-67	58.14	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2G9FWY3	9.1e-67	56.62	Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29952 PE=...	[more]
A0A2G9HYD8	4.5e-66	57.28	Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04775 PE=...	[more]
A0A2G9IA86	2.2e-65	54.46	DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_005...	[more]
A0A2G9HYA0	2.2e-65	57.28	Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=...	[more]

BLAST of Lag0010544 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00750.1	2.1e-15	60.71	GAG/POL/ENV polyprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 149..241 e-value: 1.5E-9 score: 40.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..93
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 109..318
None	No IPR available	PANTHER	PTHR24559:SF373	REVERSE TRANSCRIPTASE DOMAIN, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED	coord: 109..318
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 257..333 e-value: 1.5E-10 score: 42.7
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 260..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010544.1	Lag0010544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity