Lag0010436 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010436
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr9: 47251004 .. 47253962 (-)
RNA-Seq Expression	Lag0010436
Synteny	Lag0010436

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCGTTGGCTTCGAGATTCTGGCAAGCAGCGACGATGGAAATGGCAAAAATAAAAGTATGAGAGTGGGAAGAGAGGAAGATAAAGAGAGAAAGAGTAAAAAAGATGAGAAAAATGAAATGTGAGAGAGAATGAAGATCATAGAAGATGAAAAGGTGAAAGAAATTTAGAAAAATAAAAAATAAAAAAATCTAAATAGGTAATGATTACCTTATAGGTAATCATTACCTATGCATGGCCATTCACTCCCCAAGGAGGGGAAACAACTACTCCCAACGTGCTTTTTCTTGTTTTGTTTTTTTTTAAATGATATAAAGTCGGTTGGTTTTATTCGGTTTGAGCCTTAGGCTCACCGACCGATTGACTGGTCGGTTAGAAAAACCGATCCCGACCGATAATGTTAAAAAACCGACCGACCGATGTCATTTCGGTTTTTCAGTCTTCATTGCTCACCCCTACTACATTTTCAAAAATTGACTTGTCGCCGTGTCCTATCGTGTCCGTGTCCGTGCTTCTTAGATATCAAGAAGGGTGGCATTGAGTTTTTAGGAGAAACAGACTGATTCTTGTGATGAAGAAACGTCCATTGTCTCGATGTGAATCATTTTTGTCCTTTAGCTACTTCTCCCGGTGCCGTAAGTGACATTTATACAGTTTTACTTGGTTTAAATCTCATTTTGAACTATCAACTGAAGGGTTGTTCCATTTTGGTCTTTGAACTTTCAAAATGTTCCTGAATTTAGAAAAAAAGAAAAACTTTCTTGGTCCTTGTAACTTCCAAAATATTTAATTTAGTCCTTGAACTTAAAAAAATAATTATTTTGACAATTGCTTTTATTCTACCTCCTAATATCTACCCCAACCAACATATGTGGCTTGGATACATGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGCAATTATAAACAGGGTGCCAATCTAGTCGAGTGGGAATGGTCTTCTTTGCATAGCGTTCATGGTGGGTTGGGAGTGGGCTCCCTAGCTCAAAGGAATTTCTCCTTGATGATCAAATGGCTTTGGAGGTACACGCAAGAGAAGAATTCCCTGTGGAGGAAGATTATTATTAGTATCTACGGGGCCTCCCCTGAAGGCTGGAAATGTAATCCTTTTAGAGGAAAAAAGGCAACAAAATATGGGTTGACATTGCTGCCAGCTACTCGACCTTTGAGCAGCTCACGAGATTCATTGTTAATAGTGGTAAAAATATTAAACTTTGGGAAGATAGATTGTGCGATAACCAACCTCTTCAATGCATTTTTCCGAACCTTTATTTGATATCGAACAGAAAAGAGACGTTGATTGCAAATTGTTGGGATAATACTTCTCAAGATGGGATTAGATGGACCCTTAAACGATCTGGTGTGTTCTCAGCCAAATCCATTTTCCAGAAAATTACTAAAATCTCTCCCAATATTAGTCAGACTTTATGTAATCTTATTTGGAAGCATAAAAGCCCGAAGAAGGTCAAGGTGTTCTTGTGGTCCCTAGCATATAGGAGTCTAAATACTGATGATAAAGTGCAACAGAAGTTCAAGAATTTGTATTTGTCTCCTTCCGCTTGCAGACTCTGCATTCTTTCTGAGGAGCACTTGGATCACCTTTTTATTCACTGTGATTTTGCTAAGAAAGTGTGGAAGGAAAGGAACTCAAGAACTTTTGAAGATAAGGCTTCAAGTTTAGATAGTTTTTGTGAAAATGTCCAGAATACAGCTTCTTGGTGGATATCTCTTCATAAAAATTCTTTTTGTAATTATAACTTGCTTTCGATCATTAAAGATTGGCAAGCTCTTTTGTATTAGTCTCCAGGCGAGGGCGATCTCCACCCTTGGCCCTTAGGTTGTCTCCTTTTTTGTGACTAATATATATCTTTCATGTCTCTTATCCAAAAAAAAAATCATGTGCCAATTGGAAATTCTAAAAGGGTTGCTCTTTATTGCAGGAGCTCGTGGTCGATTCTATTACTAGTTTAATGGTTTCTAATATTCCTGTAACTTCTCAGGTGGAACCTCCTATGAGTTATGCAGAAACCCTTAAGATTTTCCTAAGTCTAGTACAAGGTTCTGGGGTTGTTGGTGTATCAAAGAATTCCACATTTCCTCAAAATCGTAAGGTTTCTTGTTGGATTAGAAAGGATCACGAGGTTTTGAATGTTATTGACGTTTTATCAATCCGTTTTTTTTTTGTTGATAAAGCATTGCTCAAATTTGAAGACCATAAAGCTCTTGTTCTTTAGATATGGTTGGGAAATGGAAGGCCTTTGGTAATTTTCATCTTTTGCTTGAAAAATGGAACAAAAAGCTTCATAGTCATCCCTGTTTTACGGAAGGTTATGGTGGTTGGATTGCAATCAAAAATTTGGCTCTAGATTATTGGTGTCGGCGATTTCTTTTTTTCTTTTTTGGAAGCATAAGTCCCCTAAGAAAGTCAAAATCTTCCTCTGGACCGTGGCTTACAGAAGCTTGAATACTGATGATAGAGTTCAAAGAAAGCTTCAAAATTGGGTTCTCTCCCCCTCAGTTTGTAGACTATGCTTTAAAGAGAGTGAAGATATTGATCATCTTCTTCTGCATTGCGATTTCGCCTATAAGAGTTGGAACTTTGTTGCCGGTCTGCTGGGATTATCGTTTTGTGTTCCGAAGAAACTGGATGGTTGGCTTGAAGAAGGGCTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATTGGGGTTGTGCGTTTAGAGCTACTATTTGGCTTTTGTGGAAAGAAAGGAATGCTAGAACCTTTGGAAAAGAGTCGTCTTATTTTGATTCTTTTTGTAATTCTGTACAAAATACAGCCTCTTGGTGGATTACTTTACACAAAAGTTCTTTTGTAA

mRNA sequence

ATGGTTCCGTTGGCTTCGAGATTCTGGCAAGCAGCGACGATGGAAATGGCAAAAATAAAAGGTGCCAATCTAGTCGAGTGGGAATGGTCTTCTTTGCATAGCGTTCATGGTGGGTTGGGAGTGGGCTCCCTAGCTCAAAGGAATTTCTCCTTGATGATCAAATGGCTTTGGAGGTACACGCAAGAGAAGAATTCCCTGTGGAGGAAGATTATTATTAGTATCTACGGGGCCTCCCCTGAAGGCTGGAAATGTAATCCTTTTAGAGGAAAAAAGGCAACAAAATATGGGTTGACATTGCTGCCAGCTACTCGACCTTTGAGCAGCTCACGAGATTCATTAAAAGAGACGTTGATTGCAAATTGTTGGGATAATACTTCTCAAGATGGGATTAGATGGACCCTTAAACGATCTGGTGTGTTCTCAGCCAAATCCATTTTCCAGAAAATTACTAAAATCTCTCCCAATATTAGTCAGACTTTATGTAATCTTATTTGGAAGCATAAAAGCCCGAAGAAGGTCAAGGTGTTCTTGTGGTCCCTAGCATATAGGAGTCTAAATACTGATGATAAAGTGCAACAGAAGTTCAAGAATTTGTATTTGTCTCCTTCCGCTTGCAGACTCTGCATTCTTTCTGAGGAGCACTTGGATCACCTTTTTATTCACTGTGATTTTGCTAAGAAAGAGCTCGTGGTCGATTCTATTACTAGTTTAATGGTTTCTAATATTCCTGTAACTTCTCAGGTGGAACCTCCTATGAGTTATGCAGAAACCCTTAAGATTTTCCTAAGTCTAGTACAAGGTTCTGGGGTTGTTGGTGTATCAAAGAATTCCACATTTCCTCAAAATCGTAAGCATAAGTCCCCTAAGAAAGTCAAAATCTTCCTCTGGACCGTGGCTTACAGAAGCTTGAATACTGATGATAGAGTTCAAAGAAAGCTTCAAAATTGGGTTCTCTCCCCCTCAGTTTGTAGACTATGCTTTAAAGAGAGTGAAGATATTGATCATCTTCTTCTGCATTGCGATTTCGCCTATAAGAGTTGGAACTTTGTTGCCGGTCTGCTGGGATTATCGTTTTGTGTTCCGAAGAAACTGGATGGTTGGCTTGAAGAAGGGCTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATTGGGGTTGTGCGTTTAGAGCTACTATTTGGCTTTTGTGGAAAGAAAGGAATGCTAGAACCTTTGGAAAAGAGTCGTCTTATTTTGATTCTTTTTGTAATTCTGTACAAAATACAGCCTCTTGGTGGATTACTTTACACAAAAGTTCTTTTGTAA

Coding sequence (CDS)

ATGGTTCCGTTGGCTTCGAGATTCTGGCAAGCAGCGACGATGGAAATGGCAAAAATAAAAGGTGCCAATCTAGTCGAGTGGGAATGGTCTTCTTTGCATAGCGTTCATGGTGGGTTGGGAGTGGGCTCCCTAGCTCAAAGGAATTTCTCCTTGATGATCAAATGGCTTTGGAGGTACACGCAAGAGAAGAATTCCCTGTGGAGGAAGATTATTATTAGTATCTACGGGGCCTCCCCTGAAGGCTGGAAATGTAATCCTTTTAGAGGAAAAAAGGCAACAAAATATGGGTTGACATTGCTGCCAGCTACTCGACCTTTGAGCAGCTCACGAGATTCATTAAAAGAGACGTTGATTGCAAATTGTTGGGATAATACTTCTCAAGATGGGATTAGATGGACCCTTAAACGATCTGGTGTGTTCTCAGCCAAATCCATTTTCCAGAAAATTACTAAAATCTCTCCCAATATTAGTCAGACTTTATGTAATCTTATTTGGAAGCATAAAAGCCCGAAGAAGGTCAAGGTGTTCTTGTGGTCCCTAGCATATAGGAGTCTAAATACTGATGATAAAGTGCAACAGAAGTTCAAGAATTTGTATTTGTCTCCTTCCGCTTGCAGACTCTGCATTCTTTCTGAGGAGCACTTGGATCACCTTTTTATTCACTGTGATTTTGCTAAGAAAGAGCTCGTGGTCGATTCTATTACTAGTTTAATGGTTTCTAATATTCCTGTAACTTCTCAGGTGGAACCTCCTATGAGTTATGCAGAAACCCTTAAGATTTTCCTAAGTCTAGTACAAGGTTCTGGGGTTGTTGGTGTATCAAAGAATTCCACATTTCCTCAAAATCGTAAGCATAAGTCCCCTAAGAAAGTCAAAATCTTCCTCTGGACCGTGGCTTACAGAAGCTTGAATACTGATGATAGAGTTCAAAGAAAGCTTCAAAATTGGGTTCTCTCCCCCTCAGTTTGTAGACTATGCTTTAAAGAGAGTGAAGATATTGATCATCTTCTTCTGCATTGCGATTTCGCCTATAAGAGTTGGAACTTTGTTGCCGGTCTGCTGGGATTATCGTTTTGTGTTCCGAAGAAACTGGATGGTTGGCTTGAAGAAGGGCTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATTGGGGTTGTGCGTTTAGAGCTACTATTTGGCTTTTGTGGAAAGAAAGGAATGCTAGAACCTTTGGAAAAGAGTCGTCTTATTTTGATTCTTTTTGTAATTCTGTACAAAATACAGCCTCTTGGTGGATTACTTTACACAAAAGTTCTTTTGTAA

Protein sequence

MVPLASRFWQAATMEMAKIKGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLFIHCDFAKKELVVDSITSLMVSNIPVTSQVEPPMSYAETLKIFLSLVQGSGVVGVSKNSTFPQNRKHKSPKKVKIFLWTVAYRSLNTDDRVQRKLQNWVLSPSVCRLCFKESEDIDHLLLHCDFAYKSWNFVAGLLGLSFCVPKKLDGWLEEGLQAWNLRKKAKVIGVVRLELLFGFCGKKGMLEPLEKSRLILILFVILYKIQPLGGLLYTKVLL

Homology

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BLAST of Lag0010436 vs. NCBI nr
Match: RVW67766.1 (hypothetical protein CK203_065561 [Vitis vinifera])

HSP 1 Score: 134.8 bits (338), Expect = 1.8e-27
Identity = 74/204 (36.27%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 20   KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
            K  +L++W+  S     GGLG G+ + RN +L+ KWLWR+ +E++ LW K+I SIYG  P
Sbjct: 821  KKDHLIKWDVVSRPKELGGLGFGNTSLRNIALLGKWLWRFPRERSGLWYKVIASIYGTHP 880

Query: 80   EGWKCN-PFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRWTLKRSG 139
             GW  N   R      +        R +SS    L    +A        D   W+L  SG
Sbjct: 881  NGWDANMVVRWSHKCPWKTIAQVFQRLMSSLSSVLFSPFLA--------DSRAWSLSSSG 940

Query: 140  VFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNL 199
            +FS KS F  ++K+S  I       +W  KSP KVK   W +A+  +NT+DK+Q +    
Sbjct: 941  LFSVKSFFLALSKVSNPILFLPAKFLWSSKSPSKVKALAWLVAHGKVNTNDKLQLRRPYK 1000

Query: 200  YLSPSACRLCILSEEHLDHLFIHC 223
             L P  C LC  + E ++HLF+HC
Sbjct: 1001 SLCPQWCILCKGNGESINHLFLHC 1016

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BLAST of Lag0010436 vs. NCBI nr
Match: CAN75040.1 (hypothetical protein VITISV_026478 [Vitis vinifera])

HSP 1 Score: 134.0 bits (336), Expect = 3.0e-27
Identity = 73/210 (34.76%), Postives = 107/210 (50.95%), Query Frame = 0


Query: 20   KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
            K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I SIYG  P
Sbjct: 1460 KKDHLVRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWYKVIGSIYGTHP 1519

Query: 80   EGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRW 139
             GW  N           K   +      P  R +  + + ++       W++   D   W
Sbjct: 1520 NGWDANMVVRWSHRCPWKAIAQVFQEFSPFVRLVVGNGERIR------FWEDLWWDSRAW 1579

Query: 140  TLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQ 199
            +L  SG+F+ KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK+Q
Sbjct: 1580 SLSSSGLFTVKSFFLALSKVSNPILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQ 1639

Query: 200  QKFKNLYLSPSACRLCILSEEHLDHLFIHC 223
             +     L P  C LC  + E +DHLF+HC
Sbjct: 1640 LRRPYKSLCPQWCILCKGNGESIDHLFLHC 1663

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BLAST of Lag0010436 vs. NCBI nr
Match: RVW89631.1 (hypothetical protein CK203_036369 [Vitis vinifera])

HSP 1 Score: 133.7 bits (335), Expect = 3.9e-27
Identity = 70/203 (34.48%), Postives = 101/203 (49.75%), Query Frame = 0


Query: 20  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
           K  +L+ W+  S     GGLG G  + RN +L+ KWLWR+ +E++ LW K+I SIYG  P
Sbjct: 21  KKDHLIRWDVVSRPKELGGLGFGKTSLRNIALLGKWLWRFPRERSGLWHKVIASIYGTHP 80

Query: 80  EGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRWTLKRSGV 139
            GW  N        ++    L                    C+  +  D   W+L  S +
Sbjct: 81  NGWDAN-----MVVRWSHRFL--------------------CFSPSLADSRAWSLSSSSL 140

Query: 140 FSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLY 199
           FS K  F  ++K+S  I   L   +W  K+P KVK   W +A+  +NT+DK+Q +     
Sbjct: 141 FSVKYFFLALSKVSNPILFLLAKFLWSSKAPSKVKTIAWLVAHGKVNTNDKLQLRRPYKS 198

Query: 200 LSPSACRLCILSEEHLDHLFIHC 223
           L P  C LC  +EE +DHLF+HC
Sbjct: 201 LCPQWCILCKGNEESIDHLFLHC 198

[Close]

BLAST of Lag0010436 vs. NCBI nr
Match: RVW20303.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-26
Identity = 76/219 (34.70%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 20  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
           K  +LV WE      + GGLG+G ++ RN +L+ KWLWRY +E ++LW ++I+SIYG+  
Sbjct: 760 KRDHLVSWEVVCKSKMKGGLGLGRISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHS 819

Query: 80  EGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDSLK--ETLIANCWDNTS---- 139
            GW  N           K   +        TR +    D ++  E L    W + S    
Sbjct: 820 NGWDANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDL---WWGDQSLGLS 879

Query: 140 ---QDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYR 199
               D   W+L  SG+F+ KS F  +++IS   S    NL+W  + P K+K F+W +A++
Sbjct: 880 PSVPDKRSWSLSSSGLFTVKSFFLALSQISGLPSVFPTNLVWNSQVPFKIKSFVWLVAHK 939

Query: 200 SLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLFIHC 223
            +NT+D +Q +     LSP  C LC+   E +DHLF+HC
Sbjct: 940 KVNTNDMLQWRRPYKTLSPDICMLCMEQGETVDHLFLHC 975

[Close]

BLAST of Lag0010436 vs. NCBI nr
Match: RVX15530.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-25
Identity = 71/212 (33.49%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 20   KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
            K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I+SIYG  P
Sbjct: 1035 KKDHLVRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHP 1094

Query: 80   EGWKCN---------PFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGI 139
             GW  N         P++         +L    R +  + + ++       +       +
Sbjct: 1095 NGWDANMVVRWSHRCPWKAIAQVFQEFSLF--VRLVVGNGERIR-------FGKIFGGIL 1154

Query: 140  RWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDK 199
             W+L  SG+FS KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK
Sbjct: 1155 EWSLSSSGLFSVKSFFLALSKVSNPILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDK 1214

Query: 200  VQQKFKNLYLSPSACRLCILSEEHLDHLFIHC 223
            +Q +     L P  C LC  + E +DHLF++C
Sbjct: 1215 LQLRRPYKSLCPQWCILCKGNGESIDHLFLYC 1237

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BLAST of Lag0010436 vs. ExPASy TrEMBL
Match: A0A438G6D2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_065561 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-28
Identity = 74/204 (36.27%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 20   KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
            K  +L++W+  S     GGLG G+ + RN +L+ KWLWR+ +E++ LW K+I SIYG  P
Sbjct: 821  KKDHLIKWDVVSRPKELGGLGFGNTSLRNIALLGKWLWRFPRERSGLWYKVIASIYGTHP 880

Query: 80   EGWKCN-PFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRWTLKRSG 139
             GW  N   R      +        R +SS    L    +A        D   W+L  SG
Sbjct: 881  NGWDANMVVRWSHKCPWKTIAQVFQRLMSSLSSVLFSPFLA--------DSRAWSLSSSG 940

Query: 140  VFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNL 199
            +FS KS F  ++K+S  I       +W  KSP KVK   W +A+  +NT+DK+Q +    
Sbjct: 941  LFSVKSFFLALSKVSNPILFLPAKFLWSSKSPSKVKALAWLVAHGKVNTNDKLQLRRPYK 1000

Query: 200  YLSPSACRLCILSEEHLDHLFIHC 223
             L P  C LC  + E ++HLF+HC
Sbjct: 1001 SLCPQWCILCKGNGESINHLFLHC 1016

[Close]

BLAST of Lag0010436 vs. ExPASy TrEMBL
Match: A5BV95 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_026478 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-27
Identity = 73/210 (34.76%), Postives = 107/210 (50.95%), Query Frame = 0


Query: 20   KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
            K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I SIYG  P
Sbjct: 1460 KKDHLVRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWYKVIGSIYGTHP 1519

Query: 80   EGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRW 139
             GW  N           K   +      P  R +  + + ++       W++   D   W
Sbjct: 1520 NGWDANMVVRWSHRCPWKAIAQVFQEFSPFVRLVVGNGERIR------FWEDLWWDSRAW 1579

Query: 140  TLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQ 199
            +L  SG+F+ KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK+Q
Sbjct: 1580 SLSSSGLFTVKSFFLALSKVSNPILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQ 1639

Query: 200  QKFKNLYLSPSACRLCILSEEHLDHLFIHC 223
             +     L P  C LC  + E +DHLF+HC
Sbjct: 1640 LRRPYKSLCPQWCILCKGNGESIDHLFLHC 1663

[Close]

BLAST of Lag0010436 vs. ExPASy TrEMBL
Match: A0A438HYV0 (zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_036369 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-27
Identity = 70/203 (34.48%), Postives = 101/203 (49.75%), Query Frame = 0


Query: 20  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
           K  +L+ W+  S     GGLG G  + RN +L+ KWLWR+ +E++ LW K+I SIYG  P
Sbjct: 21  KKDHLIRWDVVSRPKELGGLGFGKTSLRNIALLGKWLWRFPRERSGLWHKVIASIYGTHP 80

Query: 80  EGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGIRWTLKRSGV 139
            GW  N        ++    L                    C+  +  D   W+L  S +
Sbjct: 81  NGWDAN-----MVVRWSHRFL--------------------CFSPSLADSRAWSLSSSSL 140

Query: 140 FSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLY 199
           FS K  F  ++K+S  I   L   +W  K+P KVK   W +A+  +NT+DK+Q +     
Sbjct: 141 FSVKYFFLALSKVSNPILFLLAKFLWSSKAPSKVKTIAWLVAHGKVNTNDKLQLRRPYKS 198

Query: 200 LSPSACRLCILSEEHLDHLFIHC 223
           L P  C LC  +EE +DHLF+HC
Sbjct: 201 LCPQWCILCKGNEESIDHLFLHC 198

[Close]

BLAST of Lag0010436 vs. ExPASy TrEMBL
Match: A0A438CAL5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_340 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.3e-27
Identity = 76/219 (34.70%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 20  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
           K  +LV WE      + GGLG+G ++ RN +L+ KWLWRY +E ++LW ++I+SIYG+  
Sbjct: 760 KRDHLVSWEVVCKSKMKGGLGLGRISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHS 819

Query: 80  EGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDSLK--ETLIANCWDNTS---- 139
            GW  N           K   +        TR +    D ++  E L    W + S    
Sbjct: 820 NGWDANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDL---WWGDQSLGLS 879

Query: 140 ---QDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYR 199
               D   W+L  SG+F+ KS F  +++IS   S    NL+W  + P K+K F+W +A++
Sbjct: 880 PSVPDKRSWSLSSSGLFTVKSFFLALSQISGLPSVFPTNLVWNSQVPFKIKSFVWLVAHK 939

Query: 200 SLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLFIHC 223
            +NT+D +Q +     LSP  C LC+   E +DHLF+HC
Sbjct: 940 KVNTNDMLQWRRPYKTLSPDICMLCMEQGETVDHLFLHC 975

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BLAST of Lag0010436 vs. ExPASy TrEMBL
Match: A0A438K2W1 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_863 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-25
Identity = 71/212 (33.49%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 20   KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASP 79
            K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I+SIYG  P
Sbjct: 1035 KKDHLVRWEVVSRPKELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHP 1094

Query: 80   EGWKCN---------PFRGKKATKYGLTLLPATRPLSSSRDSLKETLIANCWDNTSQDGI 139
             GW  N         P++         +L    R +  + + ++       +       +
Sbjct: 1095 NGWDANMVVRWSHRCPWKAIAQVFQEFSLF--VRLVVGNGERIR-------FGKIFGGIL 1154

Query: 140  RWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDK 199
             W+L  SG+FS KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK
Sbjct: 1155 EWSLSSSGLFSVKSFFLALSKVSNPILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDK 1214

Query: 200  VQQKFKNLYLSPSACRLCILSEEHLDHLFIHC 223
            +Q +     L P  C LC  + E +DHLF++C
Sbjct: 1215 LQLRRPYKSLCPQWCILCKGNGESIDHLFLYC 1237

The following BLAST results are available for this feature:

BLAST of Lag0010436 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW67766.1	1.8e-27	36.27	hypothetical protein CK203_065561 [Vitis vinifera]	[more]
CAN75040.1	3.0e-27	34.76	hypothetical protein VITISV_026478 [Vitis vinifera]	[more]
RVW89631.1	3.9e-27	34.48	hypothetical protein CK203_036369 [Vitis vinifera]	[more]
RVW20303.1	1.5e-26	34.70	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVX15530.1	2.2e-25	33.49	putative ribonuclease H protein [Vitis vinifera]	[more]

BLAST of Lag0010436 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0010436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438G6D2	8.6e-28	36.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_065561 PE=4 SV=1	[more]
A5BV95	1.5e-27	34.76	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438HYV0	1.9e-27	34.48	zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_036369 PE=4...	[more]
A0A438CAL5	7.3e-27	34.70	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438K2W1	1.0e-25	33.49	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_863 P...	[more]

BLAST of Lag0010436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 140..227 e-value: 7.8E-15 score: 55.4 coord: 284..347 e-value: 5.0E-12 score: 46.3
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 262..384
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 262..384
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 146..228
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 146..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010436.1	Lag0010436.1	mRNA