Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGATATTGCTTCGGAGGCGGTGGCGGATTCTACTGCTAAAATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCAATTGCCAGTGACGTCATTCGCCGGACGCTTTCAATTGCATGGCGTGTCGATTCCGGCCTGGCGGTGGATCGGTTGGGTAAGAATCTTTTTCTGTTTTCTTTTGACAAGGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGATGTGATGACGCTATGGCCAAACCATCGGAGATGCCGTTTAACAAAGTGGCTTTTTGGGTGCACTTCTTTGATCTCCCTATGGCTTGTATGAACCAAATTATGGCCCGCCGGTTAGGCAATGCAGTCGGTGAGTTTGAGAATGTGGATTGTAACTCAGAGGGGCTTTGTTGGGGTCTAGTCTACGGGTGCGCATTTTGATTGACATTACTAAACCACTTCGCCGTGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCCAGTACTGTGCTCATTGTGGAAAACTGGATCACGGTTCGAATGATTGTTCCTTGTTGACGGCTCCGATGAGTGATAAGGATAAGGTTGTGGAACGCTTCCAGTATGGACCGTGGCTTCGGTTTGAGGGGTCTGTGAAACAGTCCGGTCAGACGGAGGGGATGAAACAGGTCGTGGCGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAAGCATCCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAAGGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGATGGATAA
mRNA sequence
ATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGATATTGCTTCGGAGGCGGTGGCGGATTCTACTGCTAAAATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCAATTGCCAGTGACGTCATTCGCCGGACGCTTTCAATTGCATGGCGTGTCGATTCCGGCCTGGCGGTGGATCGGTTGGGTAAGAATCTTTTTCTGTTTTCTTTTGACAAGGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGATGTGATGACGCTATGGCCAAACCATCGGAGATGCCGTTTAACAAAAGGGGCTTTGTTGGGGTCTAGTCTACGGGTGCGCATTTTGATTGACATTACTAAACCACTTCGCCGTGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCCAGTACTGTGCTCATTGTGGAAAACTGGATCACGGTTCGAATGATTGTTCCTTGTTGACGGCTCCGATGAGTGATAAGGATAAGGTTGTGGAACGCTTCCAGTATGGACCGTGGCTTCGGTTTGAGGGGTCTGTGAAACAGTCCGGTCAGACGGAGGGGATGAAACAGGTCGTGGCGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAAGCATCCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAAGGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGATGGATAA
Coding sequence (CDS)
ATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGATATTGCTTCGGAGGCGGTGGCGGATTCTACTGCTAAAATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCAATTGCCAGTGACGTCATTCGCCGGACGCTTTCAATTGCATGGCGTGTCGATTCCGGCCTGGCGGTGGATCGGTTGGGTAAGAATCTTTTTCTGTTTTCTTTTGACAAGGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGATGTGATGACGCTATGGCCAAACCATCGGAGATGCCGTTTAACAAAAGGGGCTTTGTTGGGGTCTAGTCTACGGGTGCGCATTTTGATTGACATTACTAAACCACTTCGCCGTGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCCAGTACTGTGCTCATTGTGGAAAACTGGATCACGGTTCGAATGATTGTTCCTTGTTGACGGCTCCGATGAGTGATAAGGATAAGGTTGTGGAACGCTTCCAGTATGGACCGTGGCTTCGGTTTGAGGGGTCTGTGAAACAGTCCGGTCAGACGGAGGGGATGAAACAGGTCGTGGCGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAAGCATCCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAAGGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGATGGATAA
Protein sequence
METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLDVMTLWPNHRRCRLTKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEGMKQVVATAGMTQPVPEVGMKHPLSAADEPVPAEKAGTVREPVGVVPEKTEVGAKFGDG
Homology
BLAST of Lag0010377 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 211.5 bits (537), Expect = 9.6e-51
Identity = 115/263 (43.73%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 1 METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRT 60
M+ E LL W+K LT+EE+E+A+D+ +AV + + LVGKLLA R I++DV+ R
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 LSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVL----------- 120
L +AW+V+ L V+ +GKNLFLF F + D NRV++TGPWFFDK L+VL
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 -------------DVMTLWPNHRRC-RL-------------TKGALLGSSLRVRILIDIT 180
D+ W N RL KG G+SLR+R+LIDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVER 226
KPLRRGIK+N +GP+GGCWIP+QYE+LP +C CG + H S+DC D +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS- 240
BLAST of Lag0010377 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 192.2 bits (487), Expect = 6.1e-45
Identity = 103/257 (40.08%), Postives = 143/257 (55.64%), Query Frame = 0
Query: 1 METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRT 60
M LLE WK LT+EE+++AVDI S A+ + +++ L+ KLL+ R I+ V++ T
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 LSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLD--------- 120
L IAW++D +VD +G N+FLF+F++ DRNR+LR GPW FD+ L+++D
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 -----VMTLWPNHRRCRL------------------------TKGALLGSSLRVRILIDI 180
++LW + L GS LRVR+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 TKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVE 219
KPL RGIKLN +GP+GGCWIP+QYE+LP + HCG+LDH DCS D V +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCV-----DSVSK 240
BLAST of Lag0010377 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 174.1 bits (440), Expect = 1.7e-39
Identity = 98/255 (38.43%), Postives = 141/255 (55.29%), Query Frame = 0
Query: 1 METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRT 60
M T LLE WK LT+EEEE A+D+ + A A + ++++ LVGKL RPI V++ T
Sbjct: 1 MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60
Query: 61 LSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLD--------- 120
+ AW+++ + V LG NLFLFSF + DRN++ ++GPW FD+ L++++
Sbjct: 61 MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120
Query: 121 -----VMTLWPNH---------RRCRLTKGALL---------------GSSLRVRILIDI 180
+ +W R + G L GS+LRVR+++DI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180
Query: 181 TKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVE 217
+KPLRRGIKLN +GPIGG WIP+QYE+LP +C HCG +S K
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRK--- 237
BLAST of Lag0010377 vs. NCBI nr
Match:
XP_028117212.1 (uncharacterized protein LOC114314884 [Camellia sinensis])
HSP 1 Score: 138.3 bits (347), Expect = 1.0e-28
Identity = 87/239 (36.40%), Postives = 115/239 (48.12%), Query Frame = 0
Query: 12 KLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGL 71
+L LT EEEE V + + + A +CLVGKLL RP D +R TL+ W+ G+
Sbjct: 11 RLVLT-EEEEAEVVVDEVHIHSTEANAGLCLVGKLLTMRPFNMDALRSTLTSVWKASKGV 70
Query: 72 AVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVL--------------DVMTLWPN 131
G NL L F + D+ RV+ GPW FDK L++L M W +
Sbjct: 71 VFKTFGDNLVLIQFGHIVDKRRVMINGPWSFDKQLVMLKEFNRALQPSEITFSTMEFWVH 130
Query: 132 HRRCRLTK-----GALLGS-------------------SLRVRILIDITKPLRRGIKLNA 191
L G LLG+ +L +RI I+I KPLRRG+KL A
Sbjct: 131 ASNLPLISMTRDVGVLLGNTLGKFVDMEYGDGGIAWGRALHIRIEINIDKPLRRGLKL-A 190
Query: 192 EGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFE 213
G WI +QYE+LP +C HCG L H +DC + +++V R QYGPWLR E
Sbjct: 191 LGGQEPVWITLQYERLPNFCFHCGLLGHSVHDCGNRLLEGAHREEV--RLQYGPWLRAE 245
BLAST of Lag0010377 vs. NCBI nr
Match:
OMO61345.1 (reverse transcriptase [Corchorus capsularis])
HSP 1 Score: 137.1 bits (344), Expect = 2.3e-28
Identity = 89/260 (34.23%), Postives = 132/260 (50.77%), Query Frame = 0
Query: 3 TEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLS 62
TE L + W+ +LT EEE L V + V ++ A+ + CL+GKLL+ RP+ +V+R +
Sbjct: 2 TEGLTDLWENFNLT-EEENLEVAVDPRLVDETLAEGNNCLIGKLLSRRPVNVEVMRNVMH 61
Query: 63 IAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLV-------------- 122
+ W++ GL V +G+NLF+F F+ ++ RV + PW F+K LLV
Sbjct: 62 MVWKLAGGLQVREIGENLFIFQFESDLEKERVYQQTPWNFNKALLVLKSYDAYDCVEDIK 121
Query: 123 LDVMTLWPNHRRCRL-----TKGALLGSS-------------------LRVRILIDITKP 182
LD + W L + G ++G S LR R +++TKP
Sbjct: 122 LDGCSFWKQAHDLPLGFMNESIGRVIGESFGTVEEIDTCGDKIAWGKFLRFRARLNVTKP 181
Query: 183 LRRGIKLNAEGPIGG-CWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERF 224
LRRG+ L A P GG I +YEKLP +C CG L H N+C DK K+++
Sbjct: 182 LRRGMILTA--PNGGKILISFRYEKLPDFCYVCGCLTHVENECEKAVVMRRDKGKIIK-- 241
BLAST of Lag0010377 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 4.7e-51
Identity = 115/263 (43.73%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 1 METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRT 60
M+ E LL W+K LT+EE+E+A+D+ +AV + + LVGKLLA R I++DV+ R
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 LSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVL----------- 120
L +AW+V+ L V+ +GKNLFLF F + D NRV++TGPWFFDK L+VL
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 -------------DVMTLWPNHRRC-RL-------------TKGALLGSSLRVRILIDIT 180
D+ W N RL KG G+SLR+R+LIDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVER 226
KPLRRGIK+N +GP+GGCWIP+QYE+LP +C CG + H S+DC D +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS- 240
BLAST of Lag0010377 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 2.9e-45
Identity = 103/257 (40.08%), Postives = 143/257 (55.64%), Query Frame = 0
Query: 1 METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRT 60
M LLE WK LT+EE+++AVDI S A+ + +++ L+ KLL+ R I+ V++ T
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 LSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLD--------- 120
L IAW++D +VD +G N+FLF+F++ DRNR+LR GPW FD+ L+++D
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 -----VMTLWPNHRRCRL------------------------TKGALLGSSLRVRILIDI 180
++LW + L GS LRVR+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 TKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVE 219
KPL RGIKLN +GP+GGCWIP+QYE+LP + HCG+LDH DCS D V +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCV-----DSVSK 240
BLAST of Lag0010377 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 8.3e-40
Identity = 98/255 (38.43%), Postives = 141/255 (55.29%), Query Frame = 0
Query: 1 METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRT 60
M T LLE WK LT+EEEE A+D+ + A A + ++++ LVGKL RPI V++ T
Sbjct: 1 MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60
Query: 61 LSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLD--------- 120
+ AW+++ + V LG NLFLFSF + DRN++ ++GPW FD+ L++++
Sbjct: 61 MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120
Query: 121 -----VMTLWPNH---------RRCRLTKGALL---------------GSSLRVRILIDI 180
+ +W R + G L GS+LRVR+++DI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180
Query: 181 TKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVE 217
+KPLRRGIKLN +GPIGG WIP+QYE+LP +C HCG +S K
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRK--- 237
BLAST of Lag0010377 vs. ExPASy TrEMBL
Match:
A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28
Identity = 89/260 (34.23%), Postives = 132/260 (50.77%), Query Frame = 0
Query: 3 TEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLS 62
TE L + W+ +LT EEE L V + V ++ A+ + CL+GKLL+ RP+ +V+R +
Sbjct: 2 TEGLTDLWENFNLT-EEENLEVAVDPRLVDETLAEGNNCLIGKLLSRRPVNVEVMRNVMH 61
Query: 63 IAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLV-------------- 122
+ W++ GL V +G+NLF+F F+ ++ RV + PW F+K LLV
Sbjct: 62 MVWKLAGGLQVREIGENLFIFQFESDLEKERVYQQTPWNFNKALLVLKSYDAYDCVEDIK 121
Query: 123 LDVMTLWPNHRRCRL-----TKGALLGSS-------------------LRVRILIDITKP 182
LD + W L + G ++G S LR R +++TKP
Sbjct: 122 LDGCSFWKQAHDLPLGFMNESIGRVIGESFGTVEEIDTCGDKIAWGKFLRFRARLNVTKP 181
Query: 183 LRRGIKLNAEGPIGG-CWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERF 224
LRRG+ L A P GG I +YEKLP +C CG L H N+C DK K+++
Sbjct: 182 LRRGMILTA--PNGGKILISFRYEKLPDFCYVCGCLTHVENECEKAVVMRRDKGKIIK-- 241
BLAST of Lag0010377 vs. ExPASy TrEMBL
Match:
A0A2N9FJK9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14993 PE=4 SV=1)
HSP 1 Score: 129.8 bits (325), Expect = 1.8e-26
Identity = 87/248 (35.08%), Postives = 112/248 (45.16%), Query Frame = 0
Query: 4 EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSI 63
++L+E W++ SLT E+E IA EA+ DS CL+GKLL + ++ T+
Sbjct: 3 DELVEDWRRFSLT-EDEAPGFIIAEEAMGDSEVIGSHCLLGKLLTAKFCNKAALKATMLR 62
Query: 64 AWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLDVM----------- 123
W SG+ +G+NLFLF F D RVL PW FD LLVL+V
Sbjct: 63 IWGAASGVVAQDMGRNLFLFQFQNDADCKRVLHGSPWLFDNNLLVLNVFDGSCPANQISF 122
Query: 124 ---TLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPL 183
W L G G LRVRI +D+TKPL
Sbjct: 123 NHCCFWVQFHGIPLFYMTKQTGERLGEAIGNVETVDVSANGVGWGPYLRVRISLDVTKPL 182
Query: 184 RRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLT---APMSDKDKVVER 211
+RG +L G G WI +YE+LP C HCGKL HG +C L +S + K
Sbjct: 183 QRG-RLITFGSSGQQWIAFKYERLPWLCFHCGKLGHGERECGLKIHSGGALSGEFK---- 242
BLAST of Lag0010377 vs. TAIR 10
Match:
AT1G48095.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits to 82 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 44.3 bits (103), Expect = 1.9e-04
Identity = 32/114 (28.07%), Postives = 53/114 (46.49%), Query Frame = 0
Query: 133 LRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAP 192
+RV+I + T LR ++ E G I +YEKL + C +C ++ H N+C L AP
Sbjct: 38 IRVKIRLVFTDRLRFFRRVRFESR-EGAMIGFEYEKLRRICTNCCRITHHVNNCPFLNAP 97
Query: 193 MSDKDKVVERFQYGPWLRFEGS---VKQSGQTEGMKQVVATAGM-TQPVPEVGM 243
+ D+ VE W S Q+ T +++A + +QP+P +
Sbjct: 98 VIHDDE-VEVLDVPVWEEGAASNTITDQTHMTSSDSSDISSASLISQPLPPASL 149
BLAST of Lag0010377 vs. TAIR 10
Match:
AT3G42140.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 42.4 bits (98), Expect = 7.2e-04
Identity = 44/184 (23.91%), Postives = 72/184 (39.13%), Query Frame = 0
Query: 14 SLTAEEEELAVDIASEAVADSTAKMDICLVGKLLA------PRPIASDVIRRTLSIAWRV 73
+L + +E+A+ + EA+ D L LA P+ + +V+ R L I
Sbjct: 4 NLQRQMQEIALGVQEEAINLLIELCDEALRKPNLASLQNRCPKNVDEEVVGRILEI---- 63
Query: 74 DSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLDVMTLWPNHRRCRLTKG- 133
+ F F +LR GPW F+ ++ V+ T + +
Sbjct: 64 -----------HKIEFLFQSEESMFSILRRGPWSFNDWMCVIQRWTKLHSDAEFKRIPFW 123
Query: 134 -ALLGSSLR---VRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHG 187
+ G LR RI+ I + R G+ L + QYEKL +C CG L H
Sbjct: 124 IQIRGIPLRFLTARIITSIGE--RMGLFLETNLGRDVSVLKFQYEKLKNFCTTCGMLSHD 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 9.6e-51 | 43.73 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 6.1e-45 | 40.08 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022158377.1 | 1.7e-39 | 38.43 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_028117212.1 | 1.0e-28 | 36.40 | uncharacterized protein LOC114314884 [Camellia sinensis] | [more] |
OMO61345.1 | 2.3e-28 | 34.23 | reverse transcriptase [Corchorus capsularis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 4.7e-51 | 43.73 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 2.9e-45 | 40.08 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 8.3e-40 | 38.43 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A1R3GTB5 | 1.1e-28 | 34.23 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV... | [more] |
A0A2N9FJK9 | 1.8e-26 | 35.08 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1499... | [more] |
Match Name | E-value | Identity | Description | |
AT1G48095.1 | 1.9e-04 | 28.07 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G42140.1 | 7.2e-04 | 23.91 | zinc ion binding;nucleic acid binding | [more] |