Lag0010362 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010362
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GATA transcription factor 29-like
Location	chr9: 46717416 .. 46719038 (-)
RNA-Seq Expression	Lag0010362
Synteny	Lag0010362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCTCAGATGTGGCGTCAAATGAAAAGCCATGAATATGATCATCGTCGGTTTCATTCAGAGAGTCAGGTGGACTTGACACTCCGACTTGGTTTCCCCAATGGCAATGGCGGTGAACGTGAACCAGCTGATATTGATCATAATAAACCATTATTCTCCACACCTCTTCATAATATCAGCCACCACGCTCTTCAAACTCATCAGGTTTAATTTGCTCTTTCTCTTTTTAGCTCTCTTTGCCCTCATTTTCACGAGAAGGGCTCTCTGTATCTATTGTCTTGTATCTATTGTCTTTATGTTTCTTTTAACGGTGAATAACATTTGGGATTAGGGTTTGGTTGAGAACTGTGGTGCTTTTTTAGAACAAAGAGTGAAATTATTTGAATGACTGTGTTTTTTTAAAAAAAAAAAATCATAATGATCGAATATCAACGTTTAGACATGTTTGGGAGAGATTTTGAAATTTGAAATAGTTAAAATCACTTTTCTTGTATTTGAAATCAGTTCAAAATGTCTTTAATTTACTCATTCGAAATTAATTTAATCTTTGGTTTTACGTTTTTAAACGTGACTTTTATATCATTAACCTTCATTTTAAAGGATTAAATACATGTTTCGAAACAATTTTAAATGTAAAAAAAAGGGTTATTTTAACCATTTTTAAACATGCACTCACAGATCACATTCTTAATTTCAAACCAGCCTTTTAACTCTTCAAAAGTAACTGTAATGCTATCTTTATACTTAAACCCTAATTAGGGTTTTTTTTTTTTTTTTCCAATTGATGGATGATTTGACTAATTTATGATCACAAGTGTGTCCATGGTCTTAATACTAATTAACCTTCCATCTTATCAATAGCATTTCTTATAGTGATTTTAACTATTTAAATTTGGATCATCAGTACAAATAACATGAATAATTCTCACAGATTCAAATGTGCGCAATTCAAATTGGAATTCCAATATTAAACCAAGACTCTAACGAGTGATCGTTTTGAGATAAATTATCAGGTGATGGTGAACAATAATCATGGGTTGGCGTCGGGCGGAGGCAGAAATAATGGTGAGACGATGAGTGAAGGAAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAAGCTACGTTCTAAAGTCGAATAATTATGGGCAGCATCAGCAAAGTTCATACAGCAGCAGCAGCGCCAGTAGTCATCAAATGAAGGGCATTGCCAGCACTGCAAATAATAACTTGGCCAATCTTCCTCTTCAAAACAACAACAACAATGACCTCTACACACTCCTCAACCCCGCTTCCAGAATCACAGATGATCACGAAGCCGAGGCTTCCTCCGCTGCCCGCCGGAAACCTTCACGGCGCCGCCGCGTTTCCTCCTCCAACGACGTCGATAAGAGGTGCACCAATTACAATTGCAACACCAATTTCACACCCATGTGGCGCAAAGGCCCTCTCGGTCCCAAGGTACGTAATTGATTAATTGATAATGCATGTAATGGGGAATTATTAATTAGTGTGTAATATTTTGCAGAGCCTTTGCAATGCCTGCGGCATAAGGTACAGAAAGGAAATGCTGAATCGGGAAGCAACGGCGGCAGAAAACAGCCACGACTAG

mRNA sequence

ATGGACTCTCAGATGTGGCGTCAAATGAAAAGCCATGAATATGATCATCGTCGGTTTCATTCAGAGAGTCAGGTGGACTTGACACTCCGACTTGGTTTCCCCAATGGCAATGGCGGTGAACGTGAACCAGCTGATATTGATCATAATAAACCATTATTCTCCACACCTCTTCATAATATCAGCCACCACGCTCTTCAAACTCATCAGGTGATGGTGAACAATAATCATGGGTTGGCGTCGGGCGGAGGCAGAAATAATGGTGAGACGATGAGTGAAGGAAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAAGCTACGTTCTAAAGTCGAATAATTATGGGCAGCATCAGCAAAGTTCATACAGCAGCAGCAGCGCCAGTAGTCATCAAATGAAGGGCATTGCCAGCACTGCAAATAATAACTTGGCCAATCTTCCTCTTCAAAACAACAACAACAATGACCTCTACACACTCCTCAACCCCGCTTCCAGAATCACAGATGATCACGAAGCCGAGGCTTCCTCCGCTGCCCGCCGGAAACCTTCACGGCGCCGCCGCGTTTCCTCCTCCAACGACGTCGATAAGAGGTGCACCAATTACAATTGCAACACCAATTTCACACCCATGTGGCGCAAAGGCCCTCTCGGTCCCAAGAGCCTTTGCAATGCCTGCGGCATAAGGTACAGAAAGGAAATGCTGAATCGGGAAGCAACGGCGGCAGAAAACAGCCACGACTAG

Coding sequence (CDS)

ATGGACTCTCAGATGTGGCGTCAAATGAAAAGCCATGAATATGATCATCGTCGGTTTCATTCAGAGAGTCAGGTGGACTTGACACTCCGACTTGGTTTCCCCAATGGCAATGGCGGTGAACGTGAACCAGCTGATATTGATCATAATAAACCATTATTCTCCACACCTCTTCATAATATCAGCCACCACGCTCTTCAAACTCATCAGGTGATGGTGAACAATAATCATGGGTTGGCGTCGGGCGGAGGCAGAAATAATGGTGAGACGATGAGTGAAGGAAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAAGCTACGTTCTAAAGTCGAATAATTATGGGCAGCATCAGCAAAGTTCATACAGCAGCAGCAGCGCCAGTAGTCATCAAATGAAGGGCATTGCCAGCACTGCAAATAATAACTTGGCCAATCTTCCTCTTCAAAACAACAACAACAATGACCTCTACACACTCCTCAACCCCGCTTCCAGAATCACAGATGATCACGAAGCCGAGGCTTCCTCCGCTGCCCGCCGGAAACCTTCACGGCGCCGCCGCGTTTCCTCCTCCAACGACGTCGATAAGAGGTGCACCAATTACAATTGCAACACCAATTTCACACCCATGTGGCGCAAAGGCCCTCTCGGTCCCAAGAGCCTTTGCAATGCCTGCGGCATAAGGTACAGAAAGGAAATGCTGAATCGGGAAGCAACGGCGGCAGAAAACAGCCACGACTAG

Protein sequence

MDSQMWRQMKSHEYDHRRFHSESQVDLTLRLGFPNGNGGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNYNPHQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNNNDLYTLLNPASRITDDHEAEASSAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATAAENSHD

Homology

[Close]

BLAST of Lag0010362 vs. NCBI nr
Match: XP_022985849.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 3.5e-89
Identity = 184/272 (67.65%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 1   MDSQMWR---QMKSHEYDHRRFHSESQVDLTLRLGFPNG--------------------- 60
           M+  +WR   QMK+HEYDH RFHSESQVDLTLRLGFPNG                     
Sbjct: 1   MEPHIWRQMSQMKTHEYDHHRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  -NGGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNY 120
            N GER   DIDH+KPLFS PLH+I+HHALQ HQVMVNNNHGLAS GGR NGE MSE NY
Sbjct: 61  ANAGER--PDIDHSKPLFSAPLHSINHHALQPHQVMVNNNHGLASSGGR-NGEMMSEANY 120

Query: 121 NPHQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNN 180
           NPHQIVWSKELK+YVLKSNN+GQ   S Y     +++  K + STAN+  ANLPLQ N N
Sbjct: 121 NPHQIVWSKELKTYVLKSNNFGQLHPSLY----CNTYPAKTVGSTANST-ANLPLQ-NYN 180

Query: 181 NDLYTLLNPASRITDDHEAEASSAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRK 240
           ND YTLLNPA R  DDHEAEASS +RR+  +RRRVS+ N+V++RCTNYNCNTNFTPMWRK
Sbjct: 181 NDQYTLLNPACRKADDHEAEASSGSRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRK 240

Query: 241 GPLGPKSLCNACGIRYRKEMLNREATAAENSH 248
           GPLGPKSLCNACGIRYRKE++N+EA AAEN+H
Sbjct: 241 GPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 263

[Close]

BLAST of Lag0010362 vs. NCBI nr
Match: XP_038902274.1 (putative GATA transcription factor 22 [Benincasa hispida])

HSP 1 Score: 337.4 bits (864), Expect = 1.0e-88
Identity = 183/245 (74.69%), Postives = 201/245 (82.04%), Query Frame = 0


Query: 4   QMWRQMKSHEYDHRR--FHSESQVDLTLRLGFPNGNGGEREPADIDHNKPLFSTPLHNIS 63
           Q+WRQMKSHEYDH R   HSE+QVDLTLRLGFP+G+  ER   D  HN P FST  HNI+
Sbjct: 5   QIWRQMKSHEYDHHRRLIHSENQVDLTLRLGFPDGSAVERPDID-HHNNPFFSTAFHNIN 64

Query: 64  HHALQTHQVMVNNNHGLASGGGRNNGETMSEGNYNPHQIVWSKELKSYVLKSNNYGQHQQ 123
           HH LQTHQVMV +NHG AS GGR NGE MSE NYNPHQIVWSKELK+YVLKSN++GQ   
Sbjct: 65  HHPLQTHQVMV-DNHGSASSGGR-NGEMMSEANYNPHQIVWSKELKTYVLKSNDFGQLHP 124

Query: 124 SSYSSSSASSHQMKGIASTANNNLANLPLQNNNNNDLYTLLNPASRITDDHEAEASSAAR 183
           SSYS    ++HQ K IA+T NN+  NLPL    NNDLYTLLNPASRITDDHEAEASS  R
Sbjct: 125 SSYS----NTHQAKPIATTPNNS-PNLPLP-KYNNDLYTLLNPASRITDDHEAEASSGGR 184

Query: 184 RKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREAT 243
           R+ SRRRRVS++ND ++RCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE LNREA 
Sbjct: 185 RRGSRRRRVSANNDAERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETLNREAM 240

Query: 244 AAENS 247
           AAENS
Sbjct: 245 AAENS 240

[Close]

BLAST of Lag0010362 vs. NCBI nr
Match: XP_022943672.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita moschata])

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-85
Identity = 182/273 (66.67%), Postives = 205/273 (75.09%), Query Frame = 0


Query: 1   MDSQMWR---QMKSHEYDHRRFHSESQVDLTLRLGFPNG--------------------- 60
           M+  +WR   QMK+ EYDH RFHSESQVDLTLRLGFPNG                     
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  -NGGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNY 120
            N GER   DIDH+KP FS PLH+I+HHALQ HQVMVNNNHGLAS GGR +GE MSE NY
Sbjct: 61  ANAGER--PDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGR-SGEMMSEANY 120

Query: 121 NPHQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNN 180
           NPHQIVWSKELK+YVLKSNN+GQ   S Y     +++  K I STA N + NLPLQ N N
Sbjct: 121 NPHQIVWSKELKTYVLKSNNFGQLHPSLY----CNTYPAKTIGSTA-NGMPNLPLQ-NYN 180

Query: 181 NDLYTLLNPASRITDDHEAEASS-AARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWR 240
           ND YTLLNPA R TDDHEAEASS   RR+  +RRRVS+ N+V++RCTNYNCNTNFTPMWR
Sbjct: 181 NDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWR 240

Query: 241 KGPLGPKSLCNACGIRYRKEMLNREATAAENSH 248
           KGPLGPKSLCNACGIRYRKE++N+EA AAEN+H
Sbjct: 241 KGPLGPKSLCNACGIRYRKEIMNKEAMAAENNH 264

[Close]

BLAST of Lag0010362 vs. NCBI nr
Match: XP_023513295.1 (putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-84
Identity = 180/273 (65.93%), Postives = 206/273 (75.46%), Query Frame = 0


Query: 1   MDSQMWR---QMKSHEYDHRRFHSESQVDLTLRLGFPNG--------------------- 60
           M+  +WR   QMK+ E+D  RFHSESQVDLTLRLGFPNG                     
Sbjct: 1   MEPHIWRPMSQMKTQEHDLPRFHSESQVDLTLRLGFPNGNDSGNANASANANANANANAN 60

Query: 61  -NGGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNY 120
            N GER   DIDH+KP FS P+H+I+HHALQ HQVMVNNNHGLAS GGR +GE MSE NY
Sbjct: 61  ANAGER--PDIDHSKPFFSAPIHSINHHALQPHQVMVNNNHGLASSGGR-SGEMMSEANY 120

Query: 121 NPHQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNN 180
           NPHQIVWSKELK+YVLKSNN+GQ   S Y     +++  K I STA N++ANLPLQ N N
Sbjct: 121 NPHQIVWSKELKTYVLKSNNFGQLHPSLY----CNTYPAKTIGSTA-NSMANLPLQ-NYN 180

Query: 181 NDLYTLLNPASRITDDHEAEASS-AARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWR 240
           ND YTLLNPA R TDDHEAEASS   RR+  +RRRVS+ N+V++RCTNYNCNTNFTPMWR
Sbjct: 181 NDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWR 240

Query: 241 KGPLGPKSLCNACGIRYRKEMLNREATAAENSH 248
           KGPLGPKSLCNACGIRYRKE++N+EA AAEN+H
Sbjct: 241 KGPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 264

[Close]

BLAST of Lag0010362 vs. NCBI nr
Match: KAG7010246.1 (GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-84
Identity = 180/271 (66.42%), Postives = 203/271 (74.91%), Query Frame = 0


Query: 1   MDSQMWR---QMKSHEYDHRRFHSESQVDLTLRLGFPNG--------------------N 60
           M+  +WR   QMK+ EYDH RFHSESQVDLTLRLGFPNG                    N
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  GGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNYNP 120
            GER   DIDH+ P FS PLH+I+HH LQ HQVMVNNNHGLAS G R NGE MSE NYNP
Sbjct: 61  AGER--PDIDHSIPFFSAPLHSINHHPLQPHQVMVNNNHGLASSGSR-NGEMMSEANYNP 120

Query: 121 HQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNNND 180
           HQIVWSKELK+YVLKSNN+GQ   S Y     +++  K I STA N++ NLPLQ N NND
Sbjct: 121 HQIVWSKELKTYVLKSNNFGQLHPSLY----CNTYPAKTIGSTA-NSMPNLPLQ-NYNND 180

Query: 181 LYTLLNPASRITDDHEAEASS-AARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKG 240
            YTLLNPA R TDDHEAEASS   RR+  +RRRVS+ N+V++RCTNYNCNTNFTPMWRKG
Sbjct: 181 QYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKG 240

Query: 241 PLGPKSLCNACGIRYRKEMLNREATAAENSH 248
           PLGPKSLCNACGIRYRKE++N+EA AAEN+H
Sbjct: 241 PLGPKSLCNACGIRYRKEIMNKEAMAAENNH 262

[Close]

BLAST of Lag0010362 vs. ExPASy Swiss-Prot
Match: Q9LT45 (GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.2e-12
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 198 KRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 235
           K+CTN NCN   TPMWR+GPLGPKSLCNACGI++RKE
Sbjct: 157 KKCTNMNCNALNTPMWRRGPLGPKSLCNACGIKFRKE 193

[Close]

BLAST of Lag0010362 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.9e-10
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 196 VDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATAAENSHD 249
           +D+RC   NC T  TP+WR GP GPKSLCNACGIRY+KE   R A A   + D
Sbjct: 150 LDRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE--ERRAAATTTTAD 198

[Close]

BLAST of Lag0010362 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.9e-10
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 196 VDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATAAENSHD 249
           +D+RC   NC T  TP+WR GP GPKSLCNACGIRY+KE   R A A   + D
Sbjct: 150 LDRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE--ERRAAATTTTAD 198

[Close]

BLAST of Lag0010362 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 194 NDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATAAENS 247
           N + +RC   NC+T  TP+WR GP GPKSLCNACGIR++KE   R A+ A NS
Sbjct: 71  NLLARRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNS 119

[Close]

BLAST of Lag0010362 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08
Identity = 48/128 (37.50%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 131 SHQMKGIASTANNNLANLPLQNNNN---NDLYTLLNPASRITDDHE------------AE 190
           S +M+ I  T  NN   +   NNNN   +D Y L +  +   D HE              
Sbjct: 148 SPKMRLIKKTITNNKQLIDQTNNNNHKESDHYPLNHKTNFDEDHHEDLNFKNVLTRKTTA 207

Query: 191 ASSAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEM 244
           A++  R         S++N V + C+  +CNT  TP+WR GP GPKSLCNACGIR RK  
Sbjct: 208 ATTENRYNTINENGYSNNNGVIRVCS--DCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 267

[Close]

BLAST of Lag0010362 vs. ExPASy TrEMBL
Match: A0A6J1JEF0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111483776 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 184/272 (67.65%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 1   MDSQMWR---QMKSHEYDHRRFHSESQVDLTLRLGFPNG--------------------- 60
           M+  +WR   QMK+HEYDH RFHSESQVDLTLRLGFPNG                     
Sbjct: 1   MEPHIWRQMSQMKTHEYDHHRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  -NGGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNY 120
            N GER   DIDH+KPLFS PLH+I+HHALQ HQVMVNNNHGLAS GGR NGE MSE NY
Sbjct: 61  ANAGER--PDIDHSKPLFSAPLHSINHHALQPHQVMVNNNHGLASSGGR-NGEMMSEANY 120

Query: 121 NPHQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNN 180
           NPHQIVWSKELK+YVLKSNN+GQ   S Y     +++  K + STAN+  ANLPLQ N N
Sbjct: 121 NPHQIVWSKELKTYVLKSNNFGQLHPSLY----CNTYPAKTVGSTANST-ANLPLQ-NYN 180

Query: 181 NDLYTLLNPASRITDDHEAEASSAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRK 240
           ND YTLLNPA R  DDHEAEASS +RR+  +RRRVS+ N+V++RCTNYNCNTNFTPMWRK
Sbjct: 181 NDQYTLLNPACRKADDHEAEASSGSRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRK 240

Query: 241 GPLGPKSLCNACGIRYRKEMLNREATAAENSH 248
           GPLGPKSLCNACGIRYRKE++N+EA AAEN+H
Sbjct: 241 GPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 263

[Close]

BLAST of Lag0010362 vs. ExPASy TrEMBL
Match: A0A6J1FTP0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448354 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 5.2e-86
Identity = 182/273 (66.67%), Postives = 205/273 (75.09%), Query Frame = 0


Query: 1   MDSQMWR---QMKSHEYDHRRFHSESQVDLTLRLGFPNG--------------------- 60
           M+  +WR   QMK+ EYDH RFHSESQVDLTLRLGFPNG                     
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  -NGGEREPADIDHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNY 120
            N GER   DIDH+KP FS PLH+I+HHALQ HQVMVNNNHGLAS GGR +GE MSE NY
Sbjct: 61  ANAGER--PDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGR-SGEMMSEANY 120

Query: 121 NPHQIVWSKELKSYVLKSNNYGQHQQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNN 180
           NPHQIVWSKELK+YVLKSNN+GQ   S Y     +++  K I STA N + NLPLQ N N
Sbjct: 121 NPHQIVWSKELKTYVLKSNNFGQLHPSLY----CNTYPAKTIGSTA-NGMPNLPLQ-NYN 180

Query: 181 NDLYTLLNPASRITDDHEAEASS-AARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWR 240
           ND YTLLNPA R TDDHEAEASS   RR+  +RRRVS+ N+V++RCTNYNCNTNFTPMWR
Sbjct: 181 NDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWR 240

Query: 241 KGPLGPKSLCNACGIRYRKEMLNREATAAENSH 248
           KGPLGPKSLCNACGIRYRKE++N+EA AAEN+H
Sbjct: 241 KGPLGPKSLCNACGIRYRKEIMNKEAMAAENNH 264

[Close]

BLAST of Lag0010362 vs. ExPASy TrEMBL
Match: A0A5A7TDI3 (GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00190 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.8e-84
Identity = 181/250 (72.40%), Postives = 199/250 (79.60%), Query Frame = 0


Query: 4   QMWRQMKSHEYD-HRRFHSESQVDLTLRLGFPNGNGGEREPADIDH---NKPLFSTPLHN 63
           Q+WRQMKSHEYD HRRF SESQVDLTLRLGFPNG+ GER   DIDH   N P FSTP   
Sbjct: 5   QIWRQMKSHEYDHHRRFQSESQVDLTLRLGFPNGSAGER--PDIDHHHNNNPFFSTPF-- 64

Query: 64  ISHHALQTHQVMVNNNHGLASGGGRNNGETMSEGNYNPHQIVWSKELKSYVLKSNNYGQH 123
              HALQTHQ M  NN GLA      N E MSE NYNPHQIVWSK+LK+YVLKSNNYGQ 
Sbjct: 65  ---HALQTHQ-MTANNQGLA-----RNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQL 124

Query: 124 QQSSYSSSSASSHQMKGIA-STANNNLANLPL-QNNNNNDLYTLLNPASRITDDHEAEAS 183
             SSYS+   ++HQ K IA ST NN+  NLPL +  +NNDLYTLLNPASRI+DDHEAEAS
Sbjct: 125 HPSSYST---TTHQAKPIATSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEAS 184

Query: 184 SAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLN 243
           S  RRK SRRRR S++NDV++RCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE +N
Sbjct: 185 SGGRRKGSRRRRASATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMN 238

Query: 244 REATAAENSH 248
           +EA AAENS+
Sbjct: 245 KEAMAAENSN 238

[Close]

BLAST of Lag0010362 vs. ExPASy TrEMBL
Match: A0A6J1DIM0 (GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 4.0e-70
Identity = 163/253 (64.43%), Postives = 180/253 (71.15%), Query Frame = 0


Query: 1   MDSQMWRQMKSHEYDHRRFHSESQVDLTLRLGFPNGNGGEREPADIDHNKPLFSTPLHNI 60
           M+SQ+WR         R   SESQVDLTLRLGFPNGNGG  +    DHNKPLFS PL   
Sbjct: 1   MESQLWR---------RFLRSESQVDLTLRLGFPNGNGGHPDD-HTDHNKPLFSPPL--- 60

Query: 61  SHHALQTHQV-MVNNNHGLASGGGRNNGETMSEGNYNPHQIVWSKELKSYVLKSNNYGQH 120
            HH  QTHQV  VNNN GL S GG      MSE NYNP+QI+WSKELK+YVLKSNN    
Sbjct: 61  -HHLRQTHQVAAVNNNVGLESCGG------MSEANYNPNQILWSKELKTYVLKSNN---- 120

Query: 121 QQSSYSSSSASSHQMKGIASTAN----NNLANLPLQNNNNNDLYTLLNPASRITDDHEAE 180
                 +S  S  Q+KG     N    NNLAN+PLQ  N+NDLYTLLNPASR TDDHE E
Sbjct: 121 -----QTSLGSHDQVKGNIGIGNGSTTNNLANVPLQ-TNSNDLYTLLNPASRSTDDHEDE 180

Query: 181 ASSAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEM 240
            SS +RRK SR RRV S ++ +KRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE+
Sbjct: 181 TSSGSRRKASRLRRV-SHDEPEKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEL 222

Query: 241 LNREATAAENSHD 249
           +NREA  AENSH+
Sbjct: 241 MNREAMTAENSHN 222

[Close]

BLAST of Lag0010362 vs. ExPASy TrEMBL
Match: A0A0A0L0J0 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 124/182 (68.13%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 68  HQVMVNNNHGLASGGGRNNGETMSEGNY-NPHQIVWSKELKSYVLKSNNYGQHQQSSYSS 127
           +QVM NN       G   N E MSE NY NPHQIVWSK+LK+YVLKSNN     Q  + S
Sbjct: 2   NQVMANNQ------GLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNN--NFGQQLHPS 61

Query: 128 SSASSHQMKGIASTANNNLANLPL-QNNNNNDLYTLLNPASRITDDHEAEASSAARRKPS 187
           S  ++HQ K I ++  NN  NLPL +  +NNDLYTLLNPASR+ DDHEAEASSA RRK S
Sbjct: 62  SYPNTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRRKGS 121

Query: 188 RRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATAAEN 247
           RRRRVS++NDV++RCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE +N+EA AAEN
Sbjct: 122 RRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAEN 175

[Close]

BLAST of Lag0010362 vs. TAIR 10
Match: AT3G20750.1 (GATA transcription factor 29 )

HSP 1 Score: 72.8 bits (177), Expect = 4.4e-13
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 198 KRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 235
           K+CTN NCN   TPMWR+GPLGPKSLCNACGI++RKE
Sbjct: 157 KKCTNMNCNALNTPMWRRGPLGPKSLCNACGIKFRKE 193

[Close]

BLAST of Lag0010362 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 65.1 bits (157), Expect = 9.2e-11
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 194 NDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATAAENS 247
           N + +RC   NC+T  TP+WR GP GPKSLCNACGIR++KE   R A+ A NS
Sbjct: 71  NLLARRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNS 119

[Close]

BLAST of Lag0010362 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 48/128 (37.50%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 131 SHQMKGIASTANNNLANLPLQNNNN---NDLYTLLNPASRITDDHE------------AE 190
           S +M+ I  T  NN   +   NNNN   +D Y L +  +   D HE              
Sbjct: 148 SPKMRLIKKTITNNKQLIDQTNNNNHKESDHYPLNHKTNFDEDHHEDLNFKNVLTRKTTA 207

Query: 191 ASSAARRKPSRRRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEM 244
           A++  R         S++N V + C+  +CNT  TP+WR GP GPKSLCNACGIR RK  
Sbjct: 208 ATTENRYNTINENGYSNNNGVIRVCS--DCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 267

[Close]

BLAST of Lag0010362 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 0


Query: 151 QNNNNNDLY-------------TLLNPASRITDDHEAEASSA-----------ARRKPSR 210
           QN++N D Y             +L  P++R+ D H   ++++              K S 
Sbjct: 21  QNHHNYDPYNNFSSSTSVDCTLSLGTPSTRLDDHHRFSSANSNNISGDFYIHGGNAKTSS 80

Query: 211 RRRVSSSNDVDKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATA 243
            ++   ++ + +RC   +C+T  TP+WR GP GPKSLCNACGIR++KE   R ATA
Sbjct: 81  YKKGGVAHSLPRRCA--SCDTTSTPLWRNGPKGPKSLCNACGIRFKKE--ERRATA 132

[Close]

BLAST of Lag0010362 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 48.9 bits (115), Expect = 6.8e-06
Identity = 63/232 (27.16%), Postives = 96/232 (41.38%), Query Frame = 0


Query: 47  DHNKPLFSTPLHNISHHALQTHQVMVNNNHGLASGGGRNNGETMSEG-NYNPHQIVWSKE 106
           D N   F   L +  HH LQ  Q    + H  AS    N    MS   +Y P  ++ S++
Sbjct: 14  DQNHQPFFASLGSSLHHHLQQQQQQQQHFHHQASS---NPSSLMSPSLSYFPF-LINSRQ 73

Query: 107 LKSYVLKSNN-----YGQH-----QQSSYSSSSASSHQMKGIASTANNNLANLPLQNNNN 166
            + YV  +NN        H     +  ++ S   SS   + +          +  ++N+ 
Sbjct: 74  DQVYVGYNNNTFHDVLDTHISQPLETKNFVSDGGSSSSDQMVPKKETRLKLTIKKKDNHQ 133

Query: 167 NDLYTLLNPASRITDDHEAEASSAARRKPSRRRRVSSSNDVDKRCTN------------- 226
           +      +P   +T  +  +  S+  R   +++ + +++D  K+ TN             
Sbjct: 134 DQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSSNLSNSERQ 193

Query: 227 --YN----------CNTNFTPMWRKGPLGPKSLCNACGIRYRKEMLNREATA 243
             YN          CNT  TP+WR GP GPKSLCNACGIR RK      ATA
Sbjct: 194 NGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATA 241

The following BLAST results are available for this feature:

BLAST of Lag0010362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985849.1	3.5e-89	67.65	GATA zinc finger domain-containing protein 8-like [Cucurbita maxima]	[more]
XP_038902274.1	1.0e-88	74.69	putative GATA transcription factor 22 [Benincasa hispida]	[more]
XP_022943672.1	1.1e-85	66.67	GATA zinc finger domain-containing protein 8-like [Cucurbita moschata]	[more]
XP_023513295.1	2.0e-84	65.93	putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo]	[more]
KAG7010246.1	2.0e-84	66.42	GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Lag0010362 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT45	6.2e-12	78.38	GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1	[more]
B8AX51	9.9e-10	58.49	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	9.9e-10	58.49	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]
Q6QPM2	1.3e-09	58.49	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
Q5HZ36	1.4e-08	37.50	GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2	[more]

BLAST of Lag0010362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEF0	1.7e-89	67.65	GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1FTP0	5.2e-86	66.67	GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A5A7TDI3	2.8e-84	72.40	GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1DIM0	4.0e-70	64.43	GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4...	[more]
A0A0A0L0J0	1.4e-54	68.13	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 P...	[more]

BLAST of Lag0010362 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20750.1	4.4e-13	78.38	GATA transcription factor 29	[more]
AT4G36620.1	9.2e-11	58.49	GATA transcription factor 19	[more]
AT5G56860.1	1.0e-09	37.50	GATA type zinc finger transcription factor family protein	[more]
AT2G18380.1	2.3e-09	34.48	GATA transcription factor 20	[more]
AT4G26150.1	6.8e-06	27.16	cytokinin-responsive gata factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 194..247 e-value: 4.2E-10 score: 49.6
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 200..235 e-value: 7.3E-16 score: 57.5
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 204..248 score: 11.85939
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 204..233 e-value: 1.39696E-11 score: 56.227
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 194..248 e-value: 2.5E-13 score: 51.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 130..241
None	No IPR available	PANTHER	PTHR45658:SF36	GATA TRANSCRIPTION FACTOR 17-RELATED	coord: 130..241
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 193..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010362.1	Lag0010362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding